Crystal structure analysis of N-[2-(4-fluoro-3-phenoxybenzoyl)hydrazinecarbothioyl]benzamide and its 4-methoxy derivative highlights the significance of strong and weak hydrogen bonds. The difference in the contributions of atom–atom contacts obtained from Hirshfeld surface analysis and fingerprint plots helps in distinguishing the variations in the crystal packing of the two compounds.
Supporting information
CCDC references: 2063226; 2063225
Key indicators
Structure: A1
- Single-crystal X-ray study
- T = 298 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.043
- wR factor = 0.119
- Data-to-parameter ratio = 17.0
Structure: A2
- Single-crystal X-ray study
- T = 298 K
- Mean
(C-C) = 0.007 Å
- R factor = 0.046
- wR factor = 0.122
- Data-to-parameter ratio = 7.8
checkCIF/PLATON results
No syntax errors found
Datablock: A1
Alert level C
PLAT230_ALERT_2_C Hirshfeld Test Diff for F1 --C8 . 5.1 s.u.
PLAT241_ALERT_2_C High 'MainMol' Ueq as Compared to Neighbors of O1 Check
PLAT480_ALERT_4_C Long H...A H-Bond Reported H19 ..S1 . 2.98 Ang.
PLAT480_ALERT_4_C Long H...A H-Bond Reported H20 ..O1 . 2.77 Ang.
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 8.421 Check
Alert level G
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 3 Report
PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 1 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 53 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 1 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
5 ALERT level C = Check. Ensure it is not caused by an omission or oversight
4 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
3 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
Datablock: A2
Alert level A
THETM01_ALERT_3_A The value of sine(theta_max)/wavelength is less than 0.550
Calculated sin(theta_max)/wavelength = 0.5026
| Author Response: The value of sine(theta_max)/wavelength is less due to
weakly diffracting nature of the crystal.
|
PLAT023_ALERT_3_A Resolution (too) Low [sin(theta)/Lambda < 0.6].. 20.93 Ang-1
| Author Response: This is on account of the weakly
diffracting nature of the crystal.
|
Alert level B
PLAT088_ALERT_3_B Poor Data / Parameter Ratio .................... 7.79 Note
Alert level C
PLAT241_ALERT_2_C High 'MainMol' Ueq as Compared to Neighbors of O1 Check
PLAT241_ALERT_2_C High 'MainMol' Ueq as Compared to Neighbors of C3 Check
PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of C1 Check
PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of C8 Check
PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.007 Ang.
PLAT414_ALERT_2_C Short Intra D-H..H-X H3N ..H17 1.98 Ang.
x,y,z = 1_555 Check
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 2.492 Check
PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.503 4 Report
PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density. 0 Info
Alert level G
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 3 Report
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large 7.46 Why ?
PLAT909_ALERT_3_G Percentage of I>2sig(I) Data at Theta(Max) Still 61% Note
PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 3 Note
2 ALERT level A = Most likely a serious problem - resolve or explain
1 ALERT level B = A potentially serious problem, consider carefully
9 ALERT level C = Check. Ensure it is not caused by an omission or oversight
4 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
7 ALERT type 2 Indicator that the structure model may be wrong or deficient
8 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
For both structures, data collection: APEX2 (Bruker, 2012); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT (Bruker, 2008); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015); molecular graphics: Mercury (Macrae et al., 2020), WinGX (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2020).
N-[2-(4-Fluoro-3-phenoxybenzoyl)hydrazinecarbothioyl]benzamide (A1)
top
Crystal data top
C21H16FN3O3S | F(000) = 848 |
Mr = 409.43 | Dx = 1.401 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 18.3849 (13) Å | Cell parameters from 10485 reflections |
b = 7.7063 (6) Å | θ = 2.2–28.6° |
c = 13.9216 (10) Å | µ = 0.20 mm−1 |
β = 100.136 (5)° | T = 298 K |
V = 1941.6 (2) Å3 | Plates, colorless |
Z = 4 | 0.27 × 0.20 × 0.14 mm |
Data collection top
Bruker APEXII CCD diffractometer | 2753 reflections with I > 2σ(I) |
φ and ω scans | Rint = 0.043 |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | θmax = 27.7°, θmin = 2.3° |
| h = −23→21 |
31160 measured reflections | k = −10→10 |
4460 independent reflections | l = −18→18 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.043 | H-atom parameters constrained |
wR(F2) = 0.119 | w = 1/[σ2(Fo2) + (0.0531P)2 + 0.1773P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
4460 reflections | Δρmax = 0.15 e Å−3 |
262 parameters | Δρmin = −0.17 e Å−3 |
0 restraints | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N2 | 0.35731 (8) | 0.0786 (2) | 0.88306 (10) | 0.0603 (4) | |
H2N | 0.398146 | 0.108884 | 0.865793 | 0.072* | |
O2 | 0.35727 (7) | 0.08997 (19) | 0.69344 (9) | 0.0715 (4) | |
N1 | 0.30299 (8) | 0.0015 (2) | 0.81656 (10) | 0.0635 (4) | |
H1 | 0.267495 | −0.053998 | 0.835584 | 0.076* | |
C15 | 0.47522 (9) | 0.2198 (2) | 1.01326 (12) | 0.0544 (4) | |
N3 | 0.40609 (7) | 0.18548 (18) | 1.03435 (9) | 0.0538 (4) | |
H3N | 0.398570 | 0.216229 | 1.091172 | 0.065* | |
C19 | 0.63953 (10) | 0.4486 (3) | 1.22873 (13) | 0.0637 (5) | |
H19 | 0.675815 | 0.500499 | 1.274731 | 0.076* | |
C13 | 0.30627 (10) | 0.0143 (2) | 0.72070 (12) | 0.0546 (4) | |
C11 | 0.24397 (10) | −0.0680 (2) | 0.65341 (12) | 0.0548 (4) | |
O3 | 0.48982 (7) | 0.18773 (19) | 0.93243 (8) | 0.0737 (4) | |
C12 | 0.23455 (10) | −0.0202 (2) | 0.55602 (12) | 0.0587 (5) | |
H12 | 0.267655 | 0.056422 | 0.535242 | 0.070* | |
C18 | 0.58177 (10) | 0.3634 (3) | 1.25799 (13) | 0.0651 (5) | |
H18 | 0.579476 | 0.355776 | 1.324057 | 0.078* | |
C16 | 0.53052 (9) | 0.2979 (2) | 1.09115 (11) | 0.0509 (4) | |
C7 | 0.17640 (11) | −0.0857 (3) | 0.48974 (13) | 0.0650 (5) | |
C17 | 0.52695 (10) | 0.2888 (2) | 1.19000 (12) | 0.0589 (5) | |
H17 | 0.487572 | 0.232436 | 1.210329 | 0.071* | |
O1 | 0.16903 (8) | −0.0470 (2) | 0.39147 (9) | 0.0815 (4) | |
C20 | 0.64377 (11) | 0.4571 (3) | 1.13081 (13) | 0.0683 (5) | |
H20 | 0.683089 | 0.514503 | 1.110943 | 0.082* | |
C14 | 0.34729 (9) | 0.1066 (2) | 0.97367 (11) | 0.0524 (4) | |
C1 | 0.13186 (10) | 0.1053 (3) | 0.35731 (13) | 0.0658 (5) | |
C10 | 0.19555 (10) | −0.1858 (3) | 0.68345 (14) | 0.0678 (5) | |
H10 | 0.202440 | −0.221053 | 0.748315 | 0.081* | |
C21 | 0.59024 (10) | 0.3814 (3) | 1.06281 (12) | 0.0610 (5) | |
H21 | 0.593940 | 0.385998 | 0.997084 | 0.073* | |
C8 | 0.12811 (11) | −0.1982 (3) | 0.52212 (15) | 0.0755 (6) | |
F1 | 0.07018 (8) | −0.2577 (2) | 0.45739 (10) | 0.1157 (5) | |
C9 | 0.13740 (12) | −0.2507 (3) | 0.61757 (16) | 0.0828 (6) | |
H9 | 0.104704 | −0.329362 | 0.637526 | 0.099* | |
C6 | 0.09068 (11) | 0.2008 (3) | 0.41052 (15) | 0.0756 (6) | |
H6 | 0.086151 | 0.166959 | 0.473327 | 0.091* | |
C4 | 0.06114 (16) | 0.3971 (4) | 0.2770 (2) | 0.1119 (9) | |
H4 | 0.036467 | 0.495305 | 0.249363 | 0.134* | |
C2 | 0.13978 (13) | 0.1537 (3) | 0.26449 (15) | 0.0849 (7) | |
H2 | 0.169036 | 0.089353 | 0.229477 | 0.102* | |
C3 | 0.10316 (18) | 0.3001 (4) | 0.2249 (2) | 0.1101 (9) | |
H3 | 0.107028 | 0.333605 | 0.161870 | 0.132* | |
C5 | 0.05585 (13) | 0.3485 (4) | 0.3694 (2) | 0.0958 (7) | |
H5 | 0.028365 | 0.415792 | 0.405426 | 0.115* | |
S1 | 0.26986 (3) | 0.05350 (8) | 1.01272 (3) | 0.07183 (19) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N2 | 0.0605 (9) | 0.0788 (10) | 0.0420 (8) | −0.0123 (8) | 0.0097 (7) | −0.0069 (7) |
O2 | 0.0662 (8) | 0.0981 (10) | 0.0499 (7) | −0.0220 (7) | 0.0097 (6) | 0.0030 (7) |
N1 | 0.0659 (10) | 0.0808 (11) | 0.0435 (8) | −0.0197 (8) | 0.0090 (7) | −0.0051 (8) |
C15 | 0.0558 (10) | 0.0637 (11) | 0.0457 (9) | 0.0021 (8) | 0.0147 (8) | −0.0033 (8) |
N3 | 0.0539 (8) | 0.0702 (10) | 0.0381 (7) | −0.0016 (7) | 0.0100 (6) | −0.0055 (7) |
C19 | 0.0562 (11) | 0.0809 (13) | 0.0525 (10) | −0.0022 (10) | 0.0053 (8) | −0.0055 (10) |
C13 | 0.0590 (11) | 0.0618 (11) | 0.0425 (9) | −0.0026 (9) | 0.0076 (8) | 0.0010 (8) |
C11 | 0.0566 (10) | 0.0612 (11) | 0.0457 (9) | −0.0014 (9) | 0.0070 (8) | −0.0016 (8) |
O3 | 0.0684 (8) | 0.1078 (11) | 0.0495 (7) | −0.0126 (7) | 0.0229 (6) | −0.0201 (7) |
C12 | 0.0637 (11) | 0.0683 (12) | 0.0444 (9) | −0.0035 (9) | 0.0107 (8) | −0.0032 (8) |
C18 | 0.0610 (11) | 0.0937 (14) | 0.0408 (9) | 0.0028 (10) | 0.0095 (8) | −0.0040 (9) |
C16 | 0.0512 (10) | 0.0590 (10) | 0.0433 (8) | 0.0056 (8) | 0.0104 (7) | −0.0012 (8) |
C7 | 0.0693 (12) | 0.0775 (13) | 0.0450 (10) | 0.0071 (10) | 0.0012 (9) | −0.0073 (9) |
C17 | 0.0540 (10) | 0.0781 (12) | 0.0467 (9) | −0.0011 (9) | 0.0149 (8) | −0.0006 (9) |
O1 | 0.0998 (11) | 0.0991 (11) | 0.0421 (7) | 0.0170 (9) | 0.0026 (7) | −0.0105 (7) |
C20 | 0.0595 (11) | 0.0891 (14) | 0.0576 (11) | −0.0121 (10) | 0.0136 (9) | 0.0041 (10) |
C14 | 0.0585 (11) | 0.0573 (10) | 0.0409 (8) | 0.0019 (8) | 0.0076 (8) | 0.0015 (8) |
C1 | 0.0568 (11) | 0.0850 (14) | 0.0496 (10) | −0.0092 (10) | −0.0068 (9) | −0.0020 (10) |
C10 | 0.0663 (12) | 0.0775 (13) | 0.0573 (11) | −0.0110 (10) | 0.0048 (9) | 0.0084 (10) |
C21 | 0.0609 (11) | 0.0792 (13) | 0.0443 (9) | −0.0033 (10) | 0.0134 (8) | 0.0014 (9) |
C8 | 0.0648 (13) | 0.0863 (15) | 0.0666 (13) | −0.0101 (11) | −0.0126 (10) | −0.0100 (11) |
F1 | 0.0972 (10) | 0.1390 (12) | 0.0957 (9) | −0.0334 (9) | −0.0246 (8) | −0.0135 (9) |
C9 | 0.0714 (13) | 0.0906 (15) | 0.0824 (15) | −0.0234 (12) | 0.0023 (11) | 0.0080 (13) |
C6 | 0.0658 (13) | 0.0965 (17) | 0.0625 (12) | 0.0016 (11) | 0.0058 (10) | −0.0011 (12) |
C4 | 0.101 (2) | 0.112 (2) | 0.116 (2) | 0.0046 (17) | 0.0013 (18) | 0.034 (2) |
C2 | 0.0881 (16) | 0.1073 (18) | 0.0569 (12) | −0.0178 (14) | 0.0063 (11) | −0.0009 (13) |
C3 | 0.128 (2) | 0.122 (2) | 0.0745 (16) | −0.0238 (19) | 0.0032 (16) | 0.0288 (17) |
C5 | 0.0718 (15) | 0.1026 (19) | 0.111 (2) | 0.0045 (14) | 0.0110 (14) | 0.0038 (16) |
S1 | 0.0630 (3) | 0.1025 (4) | 0.0515 (3) | −0.0143 (3) | 0.0141 (2) | −0.0031 (3) |
Geometric parameters (Å, º) top
N2—C14 | 1.3242 (19) | C7—O1 | 1.383 (2) |
N2—N1 | 1.3718 (19) | C17—H17 | 0.9300 |
N2—H2N | 0.8600 | O1—C1 | 1.399 (2) |
O2—C13 | 1.220 (2) | C20—C21 | 1.370 (3) |
N1—C13 | 1.350 (2) | C20—H20 | 0.9300 |
N1—H1 | 0.8600 | C14—S1 | 1.6617 (17) |
C15—O3 | 1.2272 (18) | C1—C6 | 1.364 (3) |
C15—N3 | 1.379 (2) | C1—C2 | 1.377 (3) |
C15—C16 | 1.478 (2) | C10—C9 | 1.374 (3) |
N3—C14 | 1.389 (2) | C10—H10 | 0.9300 |
N3—H3N | 0.8600 | C21—H21 | 0.9300 |
C19—C18 | 1.370 (3) | C8—F1 | 1.349 (2) |
C19—C20 | 1.381 (2) | C8—C9 | 1.371 (3) |
C19—H19 | 0.9300 | C9—H9 | 0.9300 |
C13—C11 | 1.488 (2) | C6—C5 | 1.380 (3) |
C11—C12 | 1.386 (2) | C6—H6 | 0.9300 |
C11—C10 | 1.387 (2) | C4—C5 | 1.360 (4) |
C12—C7 | 1.379 (3) | C4—C3 | 1.370 (4) |
C12—H12 | 0.9300 | C4—H4 | 0.9300 |
C18—C17 | 1.381 (2) | C2—C3 | 1.378 (4) |
C18—H18 | 0.9300 | C2—H2 | 0.9300 |
C16—C21 | 1.389 (2) | C3—H3 | 0.9300 |
C16—C17 | 1.391 (2) | C5—H5 | 0.9300 |
C7—C8 | 1.372 (3) | | |
| | | |
C14—N2—N1 | 120.44 (14) | C21—C20—C19 | 120.23 (17) |
C14—N2—H2N | 119.8 | C21—C20—H20 | 119.9 |
N1—N2—H2N | 119.8 | C19—C20—H20 | 119.9 |
C13—N1—N2 | 118.79 (14) | N2—C14—N3 | 115.25 (14) |
C13—N1—H1 | 120.6 | N2—C14—S1 | 122.85 (13) |
N2—N1—H1 | 120.6 | N3—C14—S1 | 121.90 (12) |
O3—C15—N3 | 120.99 (16) | C6—C1—C2 | 121.6 (2) |
O3—C15—C16 | 121.44 (15) | C6—C1—O1 | 123.55 (18) |
N3—C15—C16 | 117.57 (13) | C2—C1—O1 | 114.8 (2) |
C15—N3—C14 | 127.02 (13) | C9—C10—C11 | 120.14 (18) |
C15—N3—H3N | 116.5 | C9—C10—H10 | 119.9 |
C14—N3—H3N | 116.5 | C11—C10—H10 | 119.9 |
C18—C19—C20 | 119.86 (17) | C20—C21—C16 | 120.58 (16) |
C18—C19—H19 | 120.1 | C20—C21—H21 | 119.7 |
C20—C19—H19 | 120.1 | C16—C21—H21 | 119.7 |
O2—C13—N1 | 120.86 (16) | F1—C8—C9 | 119.7 (2) |
O2—C13—C11 | 123.81 (15) | F1—C8—C7 | 118.42 (19) |
N1—C13—C11 | 115.33 (15) | C9—C8—C7 | 121.84 (18) |
C12—C11—C10 | 119.51 (17) | C8—C9—C10 | 119.28 (19) |
C12—C11—C13 | 116.91 (16) | C8—C9—H9 | 120.4 |
C10—C11—C13 | 123.57 (16) | C10—C9—H9 | 120.4 |
C7—C12—C11 | 120.40 (18) | C1—C6—C5 | 118.7 (2) |
C7—C12—H12 | 119.8 | C1—C6—H6 | 120.6 |
C11—C12—H12 | 119.8 | C5—C6—H6 | 120.6 |
C19—C18—C17 | 120.41 (16) | C5—C4—C3 | 119.4 (3) |
C19—C18—H18 | 119.8 | C5—C4—H4 | 120.3 |
C17—C18—H18 | 119.8 | C3—C4—H4 | 120.3 |
C21—C16—C17 | 118.81 (16) | C1—C2—C3 | 118.1 (2) |
C21—C16—C15 | 117.16 (14) | C1—C2—H2 | 120.9 |
C17—C16—C15 | 124.01 (15) | C3—C2—H2 | 120.9 |
C8—C7—C12 | 118.78 (17) | C4—C3—C2 | 121.1 (2) |
C8—C7—O1 | 120.31 (18) | C4—C3—H3 | 119.4 |
C12—C7—O1 | 120.81 (18) | C2—C3—H3 | 119.4 |
C18—C17—C16 | 120.09 (16) | C4—C5—C6 | 121.0 (3) |
C18—C17—H17 | 120.0 | C4—C5—H5 | 119.5 |
C16—C17—H17 | 120.0 | C6—C5—H5 | 119.5 |
C7—O1—C1 | 118.30 (15) | | |
| | | |
C14—N2—N1—C13 | 163.27 (16) | N1—N2—C14—S1 | −0.5 (2) |
O3—C15—N3—C14 | 3.4 (3) | C15—N3—C14—N2 | −7.4 (2) |
C16—C15—N3—C14 | −177.17 (15) | C15—N3—C14—S1 | 173.17 (14) |
N2—N1—C13—O2 | 1.4 (3) | C7—O1—C1—C6 | −12.8 (3) |
N2—N1—C13—C11 | −178.11 (15) | C7—O1—C1—C2 | 167.18 (18) |
O2—C13—C11—C12 | −15.9 (3) | C12—C11—C10—C9 | −1.9 (3) |
N1—C13—C11—C12 | 163.59 (16) | C13—C11—C10—C9 | 177.23 (19) |
O2—C13—C11—C10 | 164.89 (19) | C19—C20—C21—C16 | 1.1 (3) |
N1—C13—C11—C10 | −15.6 (3) | C17—C16—C21—C20 | −1.5 (3) |
C10—C11—C12—C7 | 1.7 (3) | C15—C16—C21—C20 | 179.92 (17) |
C13—C11—C12—C7 | −177.53 (17) | C12—C7—C8—F1 | 178.13 (18) |
C20—C19—C18—C17 | −1.2 (3) | O1—C7—C8—F1 | −5.5 (3) |
O3—C15—C16—C21 | 19.2 (3) | C12—C7—C8—C9 | −1.9 (3) |
N3—C15—C16—C21 | −160.26 (15) | O1—C7—C8—C9 | 174.4 (2) |
O3—C15—C16—C17 | −159.26 (18) | F1—C8—C9—C10 | −178.4 (2) |
N3—C15—C16—C17 | 21.3 (3) | C7—C8—C9—C10 | 1.7 (4) |
C11—C12—C7—C8 | 0.2 (3) | C11—C10—C9—C8 | 0.3 (3) |
C11—C12—C7—O1 | −176.13 (16) | C2—C1—C6—C5 | 0.5 (3) |
C19—C18—C17—C16 | 0.8 (3) | O1—C1—C6—C5 | −179.55 (18) |
C21—C16—C17—C18 | 0.6 (3) | C6—C1—C2—C3 | −1.7 (3) |
C15—C16—C17—C18 | 179.02 (17) | O1—C1—C2—C3 | 178.36 (19) |
C8—C7—O1—C1 | 97.3 (2) | C5—C4—C3—C2 | 0.4 (4) |
C12—C7—O1—C1 | −86.4 (2) | C1—C2—C3—C4 | 1.3 (4) |
C18—C19—C20—C21 | 0.3 (3) | C3—C4—C5—C6 | −1.6 (4) |
N1—N2—C14—N3 | −179.95 (15) | C1—C6—C5—C4 | 1.2 (4) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O3 | 0.86 | 1.88 | 2.555 (2) | 135 |
C18—H18···O3i | 0.93 | 2.45 | 3.218 (2) | 141 |
N3—H3N···O2i | 0.86 | 2.28 | 3.067 (2) | 152 |
C19—H19···S1ii | 0.93 | 2.98 | 3.778 (2) | 145 |
C20—H20···O1iii | 0.93 | 2.77 | 3.510 (3) | 138 |
Symmetry codes: (i) x, −y+1/2, z+1/2; (ii) −x+1, y+1/2, −z+5/2; (iii) −x+1, y+1/2, −z+3/2. |
N-[2-(4-Fluoro-3-phenoxybenzoyl)hydrazinecarbothioyl]-4-methoxybenzamide (A2)
top
Crystal data top
C22H18FN3O4S | F(000) = 1824 |
Mr = 439.45 | Dx = 1.412 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
a = 47.298 (3) Å | Cell parameters from 9864 reflections |
b = 4.8054 (3) Å | θ = 2.3–21.0° |
c = 18.4939 (10) Å | µ = 0.20 mm−1 |
β = 100.429 (6)° | T = 298 K |
V = 4134.0 (4) Å3 | Plates, colorless |
Z = 8 | 0.25 × 0.17 × 0.10 mm |
Data collection top
Bruker APEXII CCD diffractometer | 1751 reflections with I > 2σ(I) |
φ and ω scans | Rint = 0.062 |
Absorption correction: multi-scan (SADABS; Bruker, 2008) | θmax = 20.9°, θmin = 2.3° |
| h = −46→38 |
9841 measured reflections | k = −4→4 |
2188 independent reflections | l = −18→18 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.046 | H-atom parameters constrained |
wR(F2) = 0.122 | w = 1/[σ2(Fo2) + (0.0421P)2 + 7.4575P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
2188 reflections | Δρmax = 0.20 e Å−3 |
281 parameters | Δρmin = −0.16 e Å−3 |
0 restraints | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.46155 (2) | 0.5067 (2) | 0.20257 (5) | 0.0570 (4) | |
O3 | 0.48485 (5) | −0.1767 (5) | 0.05581 (13) | 0.0564 (7) | |
O2 | 0.40193 (5) | −0.2064 (6) | 0.06269 (16) | 0.0693 (8) | |
N3 | 0.49466 (6) | 0.1596 (6) | 0.14319 (15) | 0.0476 (8) | |
H3N | 0.508458 | 0.244009 | 0.171425 | 0.057* | |
O4 | 0.61871 (6) | −0.3864 (7) | 0.15455 (17) | 0.0846 (9) | |
N2 | 0.44651 (6) | 0.1428 (6) | 0.09635 (17) | 0.0548 (8) | |
H2N | 0.450510 | 0.022383 | 0.065314 | 0.066* | |
F1 | 0.28801 (5) | 0.3872 (7) | 0.11032 (16) | 0.1091 (10) | |
C16 | 0.53329 (7) | −0.1387 (7) | 0.11626 (18) | 0.0431 (9) | |
N1 | 0.41856 (7) | 0.2174 (7) | 0.09631 (18) | 0.0636 (9) | |
H1 | 0.414588 | 0.386840 | 0.105555 | 0.076* | |
C13 | 0.39757 (8) | 0.0319 (9) | 0.0822 (2) | 0.0514 (10) | |
C11 | 0.36866 (8) | 0.1329 (8) | 0.0915 (2) | 0.0516 (10) | |
C14 | 0.46729 (8) | 0.2578 (7) | 0.14456 (18) | 0.0438 (9) | |
O1 | 0.29250 (6) | 0.0013 (8) | 0.01236 (19) | 0.1023 (12) | |
C21 | 0.54221 (8) | −0.3385 (8) | 0.0720 (2) | 0.0547 (10) | |
H21 | 0.528867 | −0.416711 | 0.034349 | 0.066* | |
C15 | 0.50265 (8) | −0.0588 (7) | 0.10183 (19) | 0.0441 (9) | |
C19 | 0.59029 (8) | −0.3153 (9) | 0.1383 (2) | 0.0576 (10) | |
C20 | 0.57034 (9) | −0.4253 (8) | 0.0820 (2) | 0.0603 (11) | |
H20 | 0.575894 | −0.558120 | 0.050737 | 0.072* | |
C17 | 0.55367 (9) | −0.0281 (8) | 0.1725 (2) | 0.0601 (11) | |
H17 | 0.548250 | 0.107588 | 0.203190 | 0.072* | |
C12 | 0.34481 (8) | 0.0178 (9) | 0.0473 (2) | 0.0638 (11) | |
H12 | 0.347192 | −0.119851 | 0.013548 | 0.077* | |
C18 | 0.58180 (9) | −0.1171 (10) | 0.1835 (2) | 0.0678 (12) | |
H18 | 0.595147 | −0.042543 | 0.221674 | 0.081* | |
C10 | 0.36521 (9) | 0.3291 (9) | 0.1432 (2) | 0.0663 (11) | |
H10 | 0.381175 | 0.405703 | 0.173417 | 0.080* | |
C7 | 0.31751 (9) | 0.1059 (10) | 0.0528 (2) | 0.0710 (12) | |
C8 | 0.31463 (9) | 0.3024 (10) | 0.1041 (3) | 0.0714 (12) | |
C9 | 0.33763 (11) | 0.4125 (10) | 0.1500 (3) | 0.0804 (14) | |
H9 | 0.334955 | 0.542017 | 0.185500 | 0.096* | |
C1 | 0.29108 (10) | −0.0900 (12) | −0.0591 (3) | 0.0824 (15) | |
C22 | 0.62909 (10) | −0.5808 (11) | 0.1078 (3) | 0.0994 (17) | |
H22A | 0.619623 | −0.756318 | 0.110327 | 0.149* | |
H22B | 0.649439 | −0.604267 | 0.123394 | 0.149* | |
H22C | 0.625228 | −0.513264 | 0.058166 | 0.149* | |
C2 | 0.27240 (11) | −0.3041 (13) | −0.0798 (3) | 0.1014 (17) | |
H2 | 0.262932 | −0.386389 | −0.045353 | 0.122* | |
C5 | 0.30114 (16) | −0.0664 (17) | −0.1801 (4) | 0.120 (2) | |
H5 | 0.310776 | 0.012404 | −0.214659 | 0.144* | |
C4 | 0.28168 (18) | −0.2822 (19) | −0.1998 (4) | 0.128 (3) | |
H4 | 0.278282 | −0.348577 | −0.247824 | 0.153* | |
C6 | 0.30602 (11) | 0.0306 (13) | −0.1075 (3) | 0.1001 (17) | |
H6 | 0.319071 | 0.173145 | −0.092598 | 0.120* | |
C3 | 0.26762 (14) | −0.3964 (17) | −0.1492 (5) | 0.131 (2) | |
H3 | 0.254553 | −0.539896 | −0.162868 | 0.157* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0682 (7) | 0.0481 (6) | 0.0553 (6) | 0.0142 (5) | 0.0124 (5) | −0.0014 (5) |
O3 | 0.0554 (16) | 0.0545 (17) | 0.0589 (16) | 0.0012 (14) | 0.0092 (13) | −0.0131 (14) |
O2 | 0.0576 (17) | 0.0393 (18) | 0.109 (2) | 0.0029 (14) | 0.0092 (15) | −0.0124 (16) |
N3 | 0.0473 (19) | 0.0409 (18) | 0.0556 (18) | −0.0008 (16) | 0.0119 (14) | −0.0034 (16) |
O4 | 0.0587 (19) | 0.094 (2) | 0.098 (2) | 0.0215 (18) | 0.0072 (16) | −0.0099 (19) |
N2 | 0.047 (2) | 0.0453 (19) | 0.074 (2) | 0.0059 (17) | 0.0161 (17) | −0.0125 (17) |
F1 | 0.0701 (18) | 0.141 (3) | 0.127 (2) | 0.0232 (18) | 0.0454 (15) | −0.0117 (19) |
C16 | 0.051 (2) | 0.036 (2) | 0.045 (2) | 0.0000 (19) | 0.0154 (19) | 0.0032 (18) |
N1 | 0.050 (2) | 0.036 (2) | 0.107 (3) | 0.0023 (18) | 0.0183 (18) | −0.0086 (18) |
C13 | 0.052 (3) | 0.039 (3) | 0.062 (2) | 0.003 (2) | 0.0088 (19) | 0.003 (2) |
C11 | 0.047 (2) | 0.044 (2) | 0.065 (2) | 0.001 (2) | 0.013 (2) | 0.002 (2) |
C14 | 0.050 (2) | 0.036 (2) | 0.047 (2) | 0.000 (2) | 0.0138 (19) | 0.0088 (18) |
O1 | 0.0447 (18) | 0.159 (3) | 0.104 (3) | −0.010 (2) | 0.0170 (17) | −0.039 (2) |
C21 | 0.055 (3) | 0.053 (3) | 0.058 (2) | 0.001 (2) | 0.0142 (19) | −0.006 (2) |
C15 | 0.052 (2) | 0.039 (2) | 0.045 (2) | 0.000 (2) | 0.018 (2) | 0.0040 (19) |
C19 | 0.053 (3) | 0.057 (3) | 0.063 (3) | 0.008 (2) | 0.010 (2) | 0.005 (2) |
C20 | 0.065 (3) | 0.052 (3) | 0.068 (3) | 0.007 (2) | 0.022 (2) | −0.011 (2) |
C17 | 0.063 (3) | 0.060 (3) | 0.059 (2) | 0.005 (2) | 0.015 (2) | −0.011 (2) |
C12 | 0.051 (3) | 0.064 (3) | 0.079 (3) | 0.003 (2) | 0.020 (2) | −0.014 (2) |
C18 | 0.056 (3) | 0.080 (3) | 0.064 (3) | 0.008 (2) | 0.002 (2) | −0.013 (2) |
C10 | 0.060 (3) | 0.066 (3) | 0.075 (3) | −0.004 (2) | 0.017 (2) | −0.010 (3) |
C7 | 0.059 (3) | 0.082 (3) | 0.074 (3) | 0.001 (3) | 0.017 (2) | −0.003 (3) |
C8 | 0.053 (3) | 0.084 (3) | 0.084 (3) | 0.012 (3) | 0.031 (3) | −0.001 (3) |
C9 | 0.089 (4) | 0.073 (3) | 0.088 (3) | 0.003 (3) | 0.039 (3) | −0.017 (3) |
C1 | 0.050 (3) | 0.104 (4) | 0.088 (4) | 0.017 (3) | 0.000 (3) | −0.024 (3) |
C22 | 0.077 (3) | 0.097 (4) | 0.129 (4) | 0.028 (3) | 0.031 (3) | −0.010 (4) |
C2 | 0.073 (3) | 0.121 (5) | 0.106 (4) | 0.014 (4) | 0.005 (3) | −0.023 (4) |
C5 | 0.118 (5) | 0.142 (6) | 0.099 (5) | 0.046 (5) | 0.015 (4) | 0.027 (5) |
C4 | 0.128 (6) | 0.151 (7) | 0.091 (5) | 0.056 (5) | −0.015 (5) | −0.018 (5) |
C6 | 0.082 (4) | 0.117 (5) | 0.101 (4) | 0.013 (3) | 0.015 (3) | 0.001 (4) |
C3 | 0.100 (5) | 0.158 (7) | 0.125 (6) | 0.022 (5) | −0.006 (5) | −0.039 (6) |
Geometric parameters (Å, º) top
S1—C14 | 1.661 (4) | C20—H20 | 0.9300 |
O3—C15 | 1.223 (4) | C17—C18 | 1.377 (5) |
O2—C13 | 1.229 (4) | C17—H17 | 0.9300 |
N3—C14 | 1.383 (4) | C12—C7 | 1.380 (5) |
N3—C15 | 1.391 (4) | C12—H12 | 0.9300 |
N3—H3N | 0.8600 | C18—H18 | 0.9300 |
O4—C19 | 1.367 (4) | C10—C9 | 1.392 (6) |
O4—C22 | 1.419 (5) | C10—H10 | 0.9300 |
N2—C14 | 1.322 (4) | C7—C8 | 1.362 (6) |
N2—N1 | 1.369 (4) | C8—C9 | 1.360 (6) |
N2—H2N | 0.8600 | C9—H9 | 0.9300 |
F1—C8 | 1.348 (4) | C1—C2 | 1.365 (7) |
C16—C21 | 1.377 (5) | C1—C6 | 1.365 (7) |
C16—C17 | 1.390 (5) | C22—H22A | 0.9600 |
C16—C15 | 1.476 (5) | C22—H22B | 0.9600 |
N1—C13 | 1.325 (5) | C22—H22C | 0.9600 |
N1—H1 | 0.8600 | C2—C3 | 1.338 (8) |
C13—C11 | 1.490 (5) | C2—H2 | 0.9300 |
C11—C10 | 1.373 (5) | C5—C4 | 1.390 (9) |
C11—C12 | 1.383 (5) | C5—C6 | 1.401 (8) |
O1—C7 | 1.375 (5) | C5—H5 | 0.9300 |
O1—C1 | 1.383 (5) | C4—C3 | 1.359 (9) |
C21—C20 | 1.374 (5) | C4—H4 | 0.9300 |
C21—H21 | 0.9300 | C6—H6 | 0.9300 |
C19—C18 | 1.374 (5) | C3—H3 | 0.9300 |
C19—C20 | 1.378 (5) | | |
| | | |
C14—N3—C15 | 128.0 (3) | C11—C12—H12 | 119.8 |
C14—N3—H3N | 116.0 | C19—C18—C17 | 120.5 (4) |
C15—N3—H3N | 116.0 | C19—C18—H18 | 119.8 |
C19—O4—C22 | 117.7 (3) | C17—C18—H18 | 119.8 |
C14—N2—N1 | 119.4 (3) | C11—C10—C9 | 119.4 (4) |
C14—N2—H2N | 120.3 | C11—C10—H10 | 120.3 |
N1—N2—H2N | 120.3 | C9—C10—H10 | 120.3 |
C21—C16—C17 | 117.8 (3) | C8—C7—O1 | 116.6 (4) |
C21—C16—C15 | 118.1 (3) | C8—C7—C12 | 118.5 (4) |
C17—C16—C15 | 124.1 (3) | O1—C7—C12 | 124.9 (4) |
C13—N1—N2 | 120.9 (3) | F1—C8—C9 | 118.9 (4) |
C13—N1—H1 | 119.6 | F1—C8—C7 | 118.8 (4) |
N2—N1—H1 | 119.6 | C9—C8—C7 | 122.3 (4) |
O2—C13—N1 | 121.7 (3) | C8—C9—C10 | 119.3 (4) |
O2—C13—C11 | 122.9 (4) | C8—C9—H9 | 120.4 |
N1—C13—C11 | 115.4 (4) | C10—C9—H9 | 120.4 |
C10—C11—C12 | 120.0 (4) | C2—C1—C6 | 121.5 (5) |
C10—C11—C13 | 122.1 (4) | C2—C1—O1 | 115.1 (5) |
C12—C11—C13 | 117.9 (4) | C6—C1—O1 | 123.4 (5) |
N2—C14—N3 | 115.4 (3) | O4—C22—H22A | 109.5 |
N2—C14—S1 | 123.2 (3) | O4—C22—H22B | 109.5 |
N3—C14—S1 | 121.4 (3) | H22A—C22—H22B | 109.5 |
C7—O1—C1 | 121.6 (4) | O4—C22—H22C | 109.5 |
C20—C21—C16 | 121.7 (4) | H22A—C22—H22C | 109.5 |
C20—C21—H21 | 119.2 | H22B—C22—H22C | 109.5 |
C16—C21—H21 | 119.2 | C3—C2—C1 | 120.4 (7) |
O3—C15—N3 | 120.7 (3) | C3—C2—H2 | 119.8 |
O3—C15—C16 | 122.3 (3) | C1—C2—H2 | 119.8 |
N3—C15—C16 | 116.9 (3) | C4—C5—C6 | 119.0 (7) |
O4—C19—C18 | 115.0 (4) | C4—C5—H5 | 120.5 |
O4—C19—C20 | 125.6 (4) | C6—C5—H5 | 120.5 |
C18—C19—C20 | 119.3 (4) | C3—C4—C5 | 120.3 (7) |
C21—C20—C19 | 119.9 (4) | C3—C4—H4 | 119.9 |
C21—C20—H20 | 120.0 | C5—C4—H4 | 119.9 |
C19—C20—H20 | 120.0 | C1—C6—C5 | 118.2 (6) |
C18—C17—C16 | 120.8 (4) | C1—C6—H6 | 120.9 |
C18—C17—H17 | 119.6 | C5—C6—H6 | 120.9 |
C16—C17—H17 | 119.6 | C2—C3—C4 | 120.6 (7) |
C7—C12—C11 | 120.5 (4) | C2—C3—H3 | 119.7 |
C7—C12—H12 | 119.8 | C4—C3—H3 | 119.7 |
| | | |
C14—N2—N1—C13 | −143.5 (4) | C13—C11—C12—C7 | −179.2 (4) |
N2—N1—C13—O2 | −6.2 (6) | O4—C19—C18—C17 | 180.0 (4) |
N2—N1—C13—C11 | 173.9 (3) | C20—C19—C18—C17 | −0.2 (6) |
O2—C13—C11—C10 | 147.9 (4) | C16—C17—C18—C19 | 0.7 (6) |
N1—C13—C11—C10 | −32.2 (5) | C12—C11—C10—C9 | −0.6 (6) |
O2—C13—C11—C12 | −30.6 (5) | C13—C11—C10—C9 | −179.1 (4) |
N1—C13—C11—C12 | 149.3 (4) | C1—O1—C7—C8 | 149.6 (5) |
N1—N2—C14—N3 | 176.7 (3) | C1—O1—C7—C12 | −33.4 (7) |
N1—N2—C14—S1 | −4.1 (5) | C11—C12—C7—C8 | −1.8 (6) |
C15—N3—C14—N2 | −5.7 (5) | C11—C12—C7—O1 | −178.8 (4) |
C15—N3—C14—S1 | 175.2 (3) | O1—C7—C8—F1 | −2.0 (6) |
C17—C16—C21—C20 | −0.7 (5) | C12—C7—C8—F1 | −179.3 (4) |
C15—C16—C21—C20 | −179.7 (3) | O1—C7—C8—C9 | 176.8 (4) |
C14—N3—C15—O3 | 5.9 (5) | C12—C7—C8—C9 | −0.4 (7) |
C14—N3—C15—C16 | −174.1 (3) | F1—C8—C9—C10 | −179.1 (4) |
C21—C16—C15—O3 | 5.2 (5) | C7—C8—C9—C10 | 2.1 (7) |
C17—C16—C15—O3 | −173.8 (3) | C11—C10—C9—C8 | −1.5 (7) |
C21—C16—C15—N3 | −174.7 (3) | C7—O1—C1—C2 | 148.1 (4) |
C17—C16—C15—N3 | 6.3 (5) | C7—O1—C1—C6 | −34.9 (7) |
C22—O4—C19—C18 | −177.2 (4) | C6—C1—C2—C3 | −2.0 (8) |
C22—O4—C19—C20 | 3.0 (6) | O1—C1—C2—C3 | 175.1 (5) |
C16—C21—C20—C19 | 1.2 (6) | C6—C5—C4—C3 | 0.1 (9) |
O4—C19—C20—C21 | 179.1 (4) | C2—C1—C6—C5 | 1.7 (8) |
C18—C19—C20—C21 | −0.7 (6) | O1—C1—C6—C5 | −175.1 (4) |
C21—C16—C17—C18 | −0.2 (6) | C4—C5—C6—C1 | −0.7 (8) |
C15—C16—C17—C18 | 178.8 (3) | C1—C2—C3—C4 | 1.3 (9) |
C10—C11—C12—C7 | 2.3 (6) | C5—C4—C3—C2 | −0.4 (10) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O3 | 0.86 | 1.92 | 2.589 (4) | 134 |
N3—H3N···S1i | 0.86 | 2.80 | 3.615 (3) | 159 |
C17—H17···S1i | 0.93 | 2.69 | 3.614 (4) | 174 |
N1—H1···O2ii | 0.86 | 2.15 | 2.915 (4) | 148 |
C21—H21···O3iii | 0.93 | 2.57 | 3.399 (4) | 148 |
Symmetry codes: (i) −x+1, y, −z+1/2; (ii) x, y+1, z; (iii) −x+1, −y−1, −z. |