Single-crystal structure analysis was required to correctly identify the molecular structure and stereochemistry assignment of unexpected impurities in the preparation of a novel pharmaceutical spirocyclic imidazole-amine compound.
Supporting information
CCDC references: 2092542; 2092541
Key indicators
Structure: 2
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.002 Å
- Disorder in main residue
- R factor = 0.022
- wR factor = 0.056
- Data-to-parameter ratio = 13.4
Structure: 1
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.002 Å
- R factor = 0.024
- wR factor = 0.057
- Data-to-parameter ratio = 15.2
checkCIF/PLATON results
No syntax errors found
Datablock: 2
Alert level C
PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 5 Report
Alert level G
PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 17 Note
PLAT003_ALERT_2_G Number of Uiso or Uij Restrained non-H Atoms ... 2 Report
PLAT142_ALERT_4_G s.u. on b - Axis Small or Missing .............. 0.00005 Ang.
PLAT143_ALERT_4_G s.u. on c - Axis Small or Missing .............. 0.00014 Ang.
PLAT171_ALERT_4_G The CIF-Embedded .res File Contains EADP Records 1 Report
PLAT176_ALERT_4_G The CIF-Embedded .res File Contains SADI Records 9 Report
PLAT178_ALERT_4_G The CIF-Embedded .res File Contains SIMU Records 1 Report
PLAT301_ALERT_3_G Main Residue Disorder ..............(Resd 1 ) 36% Note
PLAT793_ALERT_4_G Model has Chirality at C4 (Centro SPGR) S Verify
PLAT793_ALERT_4_G Model has Chirality at C22 (Centro SPGR) R Verify
PLAT811_ALERT_5_G No ADDSYM Analysis: Too Many Excluded Atoms .... ! Info
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 15 Note
PLAT933_ALERT_2_G Number of OMIT Records in Embedded .res File ... 5 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 19 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
1 ALERT level C = Check. Ensure it is not caused by an omission or oversight
14 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
4 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
7 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
Datablock: 1
Alert level C
PLAT220_ALERT_2_C NonSolvent Resd 1 C Ueq(max)/Ueq(min) Range 3.8 Ratio
PLAT222_ALERT_3_C NonSolvent Resd 1 H Uiso(max)/Uiso(min) Range 4.5 Ratio
PLAT411_ALERT_2_C Short Inter H...H Contact H6 ..H14A . 2.12 Ang.
1/2-x,-1/2+y,3/2-z = 2_546 Check
Alert level G
PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 2 Note
PLAT013_ALERT_1_G N.O.K. _shelx_hkl_checksum Found in CIF ...... Please Check
PLAT142_ALERT_4_G s.u. on b - Axis Small or Missing .............. 0.00008 Ang.
PLAT143_ALERT_4_G s.u. on c - Axis Small or Missing .............. 0.00008 Ang.
PLAT172_ALERT_4_G The CIF-Embedded .res File Contains DFIX Records 1 Report
PLAT793_ALERT_4_G Model has Chirality at C4 (Centro SPGR) R Verify
PLAT793_ALERT_4_G Model has Chirality at C22 (Centro SPGR) R Verify
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 1 Note
PLAT961_ALERT_5_G Dataset Contains no Negative Intensities ....... Please Check
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 19 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
3 ALERT level C = Check. Ensure it is not caused by an omission or oversight
10 ALERT level G = General information/check it is not something unexpected
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
4 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
5 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level A
PUBL024_ALERT_1_A The number of authors is greater than 5.
Please specify the role of each of the co-authors
for your paper.
1 ALERT level A = Data missing that is essential or data in wrong format
0 ALERT level G = General alerts. Data that may be required is missing
For both structures, data collection: CrysAlis PRO (Rigaku OD, 2019); cell refinement: CrysAlis PRO (Rigaku OD, 2019); data reduction: CrysAlis PRO (Rigaku OD, 2019); program(s) used to solve structure: SHELXT (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).
(
R,
R)/(
S,
S)-(1
r,1'
S,4
S,
E)-6'-Bromo-
N-[(1
r,1'
S,4
S)-6'-bromo-4-methoxy-4''-methyl-3'
H-dispiro[cyclohexane-1,2'-indene-1',2''-imidazol-5''-yl]-4-methoxy-4''-methyl-3'
H-dispiro[cyclohexane-1,2'-indene-1',2''-imidazol]-5''-imine (2)
top
Crystal data top
C36H41Br2N5O2 | F(000) = 1512 |
Mr = 735.56 | Dx = 1.474 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54178 Å |
a = 10.18956 (5) Å | Cell parameters from 82488 reflections |
b = 13.92084 (5) Å | θ = 3.2–70.3° |
c = 25.48643 (14) Å | µ = 3.42 mm−1 |
β = 113.5742 (7)° | T = 100 K |
V = 3313.47 (3) Å3 | Block, colourless |
Z = 4 | 0.18 × 0.05 × 0.03 mm |
Data collection top
Rigaku 007HF equipped with Varimax confocal mirrors and an AFC11 goniometer
and HyPix 6000 detector diffractometer | 6068 independent reflections |
Radiation source: Rotating anode, Rigaku 007 HF | 5967 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.031 |
Detector resolution: 10 pixels mm-1 | θmax = 68.2°, θmin = 3.7° |
profile data from ω–scans | h = −12→12 |
Absorption correction: gaussian (CrysAlisPro; Rigaku OD, 2019) | k = −16→16 |
Tmin = 0.621, Tmax = 1.000 | l = −30→30 |
118177 measured reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: mixed |
Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
R[F2 > 2σ(F2)] = 0.022 | w = 1/[σ2(Fo2) + (0.0259P)2 + 2.2368P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.056 | (Δ/σ)max = 0.001 |
S = 1.06 | Δρmax = 0.33 e Å−3 |
6068 reflections | Δρmin = −0.39 e Å−3 |
454 parameters | Extinction correction: SHELXL-2018/3 (Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
15 restraints | Extinction coefficient: 0.00013 (2) |
Primary atom site location: dual | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. This diastereoisomer has crystallised in the centrosymmetric space group
P21/n; meaning that both RS and SR forms of the API must be present in equal
amounts within the crystal. The atoms of both methoxy groups (O1, C18 and O2,
C36), have been modelled as single sites with large thermal ellipsoids. This
was found to be the most appropriate model; however, these large ellipsoids
result in two checkCIF C-alerts. The N2-H2 bond length has been restrained,
otherwise it refined to an unrealistic value. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Br1A | 0.94977 (8) | −0.13936 (5) | 0.43736 (3) | 0.0374 (2) | 0.892 (3) |
Br1B | 0.9408 (7) | −0.1378 (3) | 0.4382 (2) | 0.0172 (9)* | 0.108 (3) |
Br2 | 1.07263 (2) | −0.11819 (2) | 0.78926 (2) | 0.02647 (6) | |
C1 | 0.53448 (14) | 0.13684 (9) | 0.50383 (6) | 0.0145 (3) | |
C2 | 0.43133 (15) | 0.12704 (10) | 0.44275 (6) | 0.0165 (3) | |
C3 | 0.27976 (15) | 0.09625 (11) | 0.42505 (6) | 0.0202 (3) | |
H3A | 0.229686 | 0.101766 | 0.383384 | 0.030* | |
H3B | 0.232780 | 0.137362 | 0.443573 | 0.030* | |
H3C | 0.277007 | 0.029346 | 0.436529 | 0.030* | |
C4 | 0.63956 (15) | 0.17633 (11) | 0.44190 (6) | 0.0193 (3) | |
C5A | 0.7365 (5) | 0.1160 (3) | 0.4219 (2) | 0.0222 (4) | 0.892 (3) |
C5B | 0.726 (5) | 0.1225 (19) | 0.4235 (19) | 0.0203 (18)* | 0.108 (3) |
C6B | 0.779 (5) | 0.0303 (19) | 0.4395 (18) | 0.0203 (18)* | 0.108 (3) |
H6B | 0.758545 | −0.003496 | 0.467690 | 0.024* | 0.108 (3) |
C7B | 0.862 (4) | −0.0124 (15) | 0.4141 (16) | 0.0203 (18)* | 0.108 (3) |
C8B | 0.892 (3) | 0.0371 (14) | 0.3728 (13) | 0.0203 (18)* | 0.108 (3) |
H8B | 0.949075 | 0.007835 | 0.355409 | 0.024* | 0.108 (3) |
C9B | 0.839 (4) | 0.1293 (14) | 0.3568 (14) | 0.0203 (18)* | 0.108 (3) |
H9B | 0.859224 | 0.163089 | 0.328615 | 0.024* | 0.108 (3) |
C10B | 0.756 (5) | 0.1720 (15) | 0.3822 (17) | 0.0203 (18)* | 0.108 (3) |
C6A | 0.7881 (6) | 0.0251 (3) | 0.4394 (2) | 0.0232 (4) | 0.892 (3) |
H6A | 0.764777 | −0.009365 | 0.466683 | 0.028* | 0.892 (3) |
C7A | 0.8764 (5) | −0.0138 (2) | 0.41507 (19) | 0.0295 (6) | 0.892 (3) |
C8A | 0.9095 (4) | 0.0346 (3) | 0.37454 (17) | 0.0378 (7) | 0.892 (3) |
H8A | 0.969356 | 0.005467 | 0.358518 | 0.045* | 0.892 (3) |
C9A | 0.8551 (5) | 0.1254 (3) | 0.35756 (19) | 0.0400 (8) | 0.892 (3) |
H9A | 0.877176 | 0.159069 | 0.329666 | 0.048* | 0.892 (3) |
C10A | 0.7676 (6) | 0.1679 (2) | 0.3814 (2) | 0.0308 (6) | 0.892 (3) |
C11A | 0.6999 (8) | 0.2652 (3) | 0.3726 (2) | 0.0333 (7) | 0.892 (3) |
H11A | 0.608818 | 0.266382 | 0.338153 | 0.040* | 0.892 (3) |
H11B | 0.764944 | 0.314851 | 0.368599 | 0.040* | 0.892 (3) |
C11B | 0.697 (6) | 0.273 (2) | 0.3769 (19) | 0.0203 (18)* | 0.108 (3) |
H11C | 0.613084 | 0.281278 | 0.340010 | 0.024* | 0.108 (3) |
H11D | 0.770694 | 0.320734 | 0.378786 | 0.024* | 0.108 (3) |
C12A | 0.6733 (3) | 0.28113 (17) | 0.42800 (14) | 0.0223 (6) | 0.892 (3) |
C12B | 0.651 (3) | 0.2870 (12) | 0.4280 (12) | 0.0203 (18)* | 0.108 (3) |
C13A | 0.5515 (2) | 0.3498 (3) | 0.42170 (15) | 0.0284 (6) | 0.892 (3) |
H13A | 0.528888 | 0.344473 | 0.455909 | 0.034* | 0.892 (3) |
H13B | 0.465152 | 0.330764 | 0.387914 | 0.034* | 0.892 (3) |
C13B | 0.518 (3) | 0.349 (2) | 0.4150 (15) | 0.0203 (18)* | 0.108 (3) |
H13C | 0.483509 | 0.338398 | 0.445655 | 0.024* | 0.108 (3) |
H13D | 0.442776 | 0.326030 | 0.378784 | 0.024* | 0.108 (3) |
C14A | 0.5885 (2) | 0.45441 (16) | 0.41473 (9) | 0.0307 (5) | 0.892 (3) |
H14A | 0.603163 | 0.461269 | 0.378796 | 0.037* | 0.892 (3) |
H14B | 0.507726 | 0.496456 | 0.412131 | 0.037* | 0.892 (3) |
C14B | 0.535 (2) | 0.4608 (14) | 0.4093 (8) | 0.0203 (18)* | 0.108 (3) |
H14C | 0.548316 | 0.474167 | 0.373635 | 0.024* | 0.108 (3) |
H14D | 0.445952 | 0.493368 | 0.406538 | 0.024* | 0.108 (3) |
C15A | 0.7235 (3) | 0.48558 (15) | 0.46518 (8) | 0.0267 (4) | 0.892 (3) |
H15A | 0.706406 | 0.480777 | 0.501104 | 0.032* | 0.892 (3) |
C15B | 0.654 (2) | 0.4996 (12) | 0.4572 (7) | 0.0203 (18)* | 0.108 (3) |
H15B | 0.635274 | 0.492084 | 0.492578 | 0.024* | 0.108 (3) |
C16A | 0.8469 (2) | 0.42084 (16) | 0.47028 (8) | 0.0261 (4) | 0.892 (3) |
H16A | 0.933141 | 0.440372 | 0.503969 | 0.031* | 0.892 (3) |
H16B | 0.867971 | 0.428206 | 0.435805 | 0.031* | 0.892 (3) |
C16B | 0.791 (3) | 0.4494 (14) | 0.4659 (7) | 0.0203 (18)* | 0.108 (3) |
H16C | 0.868915 | 0.476239 | 0.500163 | 0.024* | 0.108 (3) |
H16D | 0.814573 | 0.461434 | 0.432469 | 0.024* | 0.108 (3) |
C17A | 0.8131 (2) | 0.31553 (15) | 0.47662 (9) | 0.0215 (5) | 0.892 (3) |
H17A | 0.804927 | 0.306878 | 0.513749 | 0.026* | 0.892 (3) |
H17B | 0.893491 | 0.275115 | 0.477054 | 0.026* | 0.892 (3) |
C17B | 0.781 (2) | 0.3407 (15) | 0.4737 (10) | 0.0203 (18)* | 0.108 (3) |
H17C | 0.779365 | 0.329361 | 0.511730 | 0.024* | 0.108 (3) |
H17D | 0.870363 | 0.311012 | 0.474303 | 0.024* | 0.108 (3) |
C18A | 0.6803 (3) | 0.65329 (16) | 0.46879 (12) | 0.0413 (6) | 0.892 (3) |
H18A | 0.583914 | 0.650527 | 0.438231 | 0.062* | 0.892 (3) |
H18B | 0.722462 | 0.716483 | 0.468597 | 0.062* | 0.892 (3) |
H18C | 0.674585 | 0.642820 | 0.505843 | 0.062* | 0.892 (3) |
C18B | 0.7490 (18) | 0.6576 (11) | 0.4964 (7) | 0.0203 (18)* | 0.108 (3) |
H18D | 0.754713 | 0.724310 | 0.485220 | 0.030* | 0.108 (3) |
H18E | 0.845719 | 0.630669 | 0.514422 | 0.030* | 0.108 (3) |
H18F | 0.702936 | 0.655535 | 0.523542 | 0.030* | 0.108 (3) |
C19 | 0.60745 (14) | 0.15389 (9) | 0.60063 (6) | 0.0138 (3) | |
C20 | 0.57460 (14) | 0.16738 (9) | 0.65227 (6) | 0.0144 (3) | |
C21 | 0.43197 (15) | 0.15223 (11) | 0.65370 (6) | 0.0188 (3) | |
H21A | 0.398441 | 0.087093 | 0.640470 | 0.028* | |
H21B | 0.363969 | 0.199100 | 0.628608 | 0.028* | |
H21C | 0.439273 | 0.160477 | 0.692959 | 0.028* | |
C22 | 0.80075 (14) | 0.20290 (10) | 0.67386 (6) | 0.0144 (3) | |
C23 | 0.93006 (14) | 0.14103 (10) | 0.70748 (6) | 0.0152 (3) | |
C24 | 0.93173 (15) | 0.05021 (10) | 0.72998 (6) | 0.0170 (3) | |
H24 | 0.845787 | 0.018643 | 0.726256 | 0.020* | |
C25 | 1.06528 (16) | 0.00721 (11) | 0.75835 (6) | 0.0195 (3) | |
C26 | 1.19161 (16) | 0.05226 (11) | 0.76421 (6) | 0.0218 (3) | |
H26 | 1.280946 | 0.021263 | 0.784060 | 0.026* | |
C27 | 1.18686 (15) | 0.14333 (11) | 0.74081 (6) | 0.0201 (3) | |
H27 | 1.272763 | 0.174655 | 0.744257 | 0.024* | |
C28 | 1.05525 (15) | 0.18787 (10) | 0.71239 (6) | 0.0173 (3) | |
C29 | 1.02117 (15) | 0.28508 (10) | 0.68463 (6) | 0.0189 (3) | |
H29A | 1.022639 | 0.283712 | 0.646033 | 0.023* | |
H29B | 1.090366 | 0.333869 | 0.708176 | 0.023* | |
C30 | 0.86808 (14) | 0.30664 (10) | 0.68100 (6) | 0.0158 (3) | |
C31 | 0.78163 (17) | 0.37358 (10) | 0.63154 (6) | 0.0215 (3) | |
H31A | 0.682777 | 0.379223 | 0.629414 | 0.026* | |
H31B | 0.776406 | 0.345604 | 0.595042 | 0.026* | |
C32 | 0.84940 (17) | 0.47367 (11) | 0.63930 (6) | 0.0237 (3) | |
H32A | 0.945356 | 0.468505 | 0.638376 | 0.028* | |
H32B | 0.789723 | 0.515270 | 0.607076 | 0.028* | |
C33 | 0.86370 (16) | 0.51995 (10) | 0.69566 (6) | 0.0199 (3) | |
H33 | 0.766053 | 0.534957 | 0.693902 | 0.024* | |
C34 | 0.94019 (15) | 0.45383 (10) | 0.74631 (6) | 0.0184 (3) | |
H34A | 0.935315 | 0.482069 | 0.781137 | 0.022* | |
H34B | 1.042379 | 0.449010 | 0.752665 | 0.022* | |
C35 | 0.87464 (15) | 0.35300 (10) | 0.73697 (6) | 0.0166 (3) | |
H35A | 0.776587 | 0.356845 | 0.735909 | 0.020* | |
H35B | 0.932251 | 0.311634 | 0.769691 | 0.020* | |
C36 | 0.86287 (19) | 0.68719 (11) | 0.67521 (7) | 0.0294 (4) | |
H36A | 0.785107 | 0.699087 | 0.687764 | 0.044* | |
H36B | 0.822439 | 0.673693 | 0.634040 | 0.044* | |
H36C | 0.924525 | 0.744030 | 0.683035 | 0.044* | |
N1 | 0.50182 (12) | 0.12806 (8) | 0.54828 (5) | 0.0145 (2) | |
N2 | 0.65823 (13) | 0.16116 (9) | 0.50079 (5) | 0.0158 (2) | |
H2 | 0.730 (2) | 0.1702 (12) | 0.5305 (8) | 0.019* | |
N3 | 0.48867 (13) | 0.15027 (9) | 0.40810 (5) | 0.0197 (3) | |
N4 | 0.74130 (12) | 0.17302 (8) | 0.61310 (5) | 0.0144 (2) | |
N5 | 0.68690 (12) | 0.19542 (8) | 0.69490 (5) | 0.0147 (2) | |
O1A | 0.76650 (15) | 0.58132 (9) | 0.45969 (6) | 0.0329 (4) | 0.892 (3) |
O1B | 0.6675 (12) | 0.6029 (8) | 0.4471 (4) | 0.0203 (18)* | 0.108 (3) |
O2 | 0.94500 (11) | 0.60694 (7) | 0.70543 (5) | 0.0233 (2) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Br1A | 0.01661 (19) | 0.0563 (3) | 0.0367 (2) | −0.00006 (10) | 0.00794 (11) | −0.02513 (17) |
Br2 | 0.03585 (10) | 0.02105 (9) | 0.02360 (9) | 0.00887 (6) | 0.01305 (7) | 0.00352 (6) |
C1 | 0.0141 (6) | 0.0122 (6) | 0.0154 (7) | −0.0012 (5) | 0.0039 (5) | 0.0001 (5) |
C2 | 0.0167 (7) | 0.0152 (7) | 0.0149 (7) | −0.0023 (5) | 0.0034 (6) | 0.0001 (5) |
C3 | 0.0160 (7) | 0.0228 (7) | 0.0185 (7) | −0.0044 (6) | 0.0035 (6) | −0.0001 (6) |
C4 | 0.0179 (7) | 0.0278 (8) | 0.0105 (6) | −0.0081 (6) | 0.0039 (5) | −0.0001 (6) |
C5A | 0.0174 (13) | 0.0380 (12) | 0.0125 (8) | −0.0138 (8) | 0.0075 (8) | −0.0092 (9) |
C6A | 0.0165 (12) | 0.0382 (11) | 0.0161 (8) | −0.0104 (8) | 0.0078 (8) | −0.0112 (8) |
C7A | 0.0149 (13) | 0.0498 (12) | 0.0238 (10) | −0.0120 (8) | 0.0078 (9) | −0.0208 (8) |
C8A | 0.0242 (15) | 0.0683 (16) | 0.0288 (11) | −0.0214 (11) | 0.0189 (11) | −0.0257 (10) |
C9A | 0.038 (2) | 0.0692 (16) | 0.0227 (10) | −0.0302 (12) | 0.0220 (12) | −0.0168 (10) |
C10A | 0.0292 (16) | 0.0499 (13) | 0.0153 (8) | −0.0223 (9) | 0.0109 (9) | −0.0089 (9) |
C11A | 0.0400 (13) | 0.0461 (15) | 0.0131 (13) | −0.0225 (12) | 0.0099 (9) | −0.0006 (11) |
C12A | 0.0217 (13) | 0.0293 (10) | 0.0141 (8) | −0.0120 (8) | 0.0051 (9) | 0.0022 (7) |
C13A | 0.0226 (14) | 0.0294 (10) | 0.0242 (13) | −0.0090 (12) | −0.0001 (13) | 0.0075 (9) |
C14A | 0.0251 (10) | 0.0287 (10) | 0.0314 (11) | −0.0038 (10) | 0.0040 (10) | 0.0105 (8) |
C15A | 0.0267 (11) | 0.0229 (10) | 0.0268 (10) | −0.0069 (9) | 0.0068 (9) | 0.0058 (7) |
C16A | 0.0220 (9) | 0.0262 (10) | 0.0255 (10) | −0.0090 (8) | 0.0046 (8) | 0.0025 (7) |
C17A | 0.0193 (11) | 0.0241 (12) | 0.0177 (8) | −0.0075 (7) | 0.0040 (8) | 0.0014 (8) |
C18A | 0.0414 (13) | 0.0270 (11) | 0.0520 (15) | 0.0018 (9) | 0.0149 (12) | 0.0051 (11) |
C19 | 0.0157 (6) | 0.0112 (6) | 0.0143 (6) | 0.0003 (5) | 0.0059 (5) | 0.0009 (5) |
C20 | 0.0154 (6) | 0.0130 (6) | 0.0150 (6) | 0.0011 (5) | 0.0061 (5) | 0.0003 (5) |
C21 | 0.0150 (7) | 0.0248 (7) | 0.0173 (7) | −0.0013 (6) | 0.0071 (6) | −0.0019 (6) |
C22 | 0.0142 (6) | 0.0172 (7) | 0.0126 (6) | −0.0025 (5) | 0.0060 (5) | −0.0018 (5) |
C23 | 0.0144 (7) | 0.0199 (7) | 0.0113 (6) | −0.0001 (5) | 0.0051 (5) | −0.0035 (5) |
C24 | 0.0173 (7) | 0.0203 (7) | 0.0149 (7) | −0.0005 (5) | 0.0081 (6) | −0.0023 (5) |
C25 | 0.0240 (7) | 0.0213 (7) | 0.0137 (6) | 0.0044 (6) | 0.0080 (6) | −0.0023 (5) |
C26 | 0.0175 (7) | 0.0289 (8) | 0.0171 (7) | 0.0063 (6) | 0.0048 (6) | −0.0061 (6) |
C27 | 0.0143 (7) | 0.0272 (8) | 0.0198 (7) | −0.0022 (6) | 0.0078 (6) | −0.0086 (6) |
C28 | 0.0171 (7) | 0.0214 (7) | 0.0155 (7) | −0.0033 (6) | 0.0087 (6) | −0.0062 (5) |
C29 | 0.0179 (7) | 0.0208 (7) | 0.0213 (7) | −0.0046 (6) | 0.0115 (6) | −0.0046 (6) |
C30 | 0.0162 (7) | 0.0162 (7) | 0.0147 (7) | −0.0026 (5) | 0.0059 (5) | −0.0018 (5) |
C31 | 0.0262 (8) | 0.0189 (7) | 0.0152 (7) | −0.0035 (6) | 0.0039 (6) | −0.0006 (6) |
C32 | 0.0318 (8) | 0.0190 (7) | 0.0169 (7) | −0.0045 (6) | 0.0062 (6) | 0.0005 (6) |
C33 | 0.0198 (7) | 0.0166 (7) | 0.0207 (7) | −0.0043 (5) | 0.0055 (6) | −0.0021 (6) |
C34 | 0.0188 (7) | 0.0191 (7) | 0.0155 (7) | −0.0016 (6) | 0.0051 (6) | −0.0026 (5) |
C35 | 0.0171 (7) | 0.0177 (7) | 0.0145 (7) | −0.0002 (5) | 0.0058 (6) | −0.0014 (5) |
C36 | 0.0350 (9) | 0.0188 (8) | 0.0263 (8) | −0.0046 (7) | 0.0038 (7) | 0.0016 (6) |
N1 | 0.0144 (6) | 0.0151 (6) | 0.0135 (6) | −0.0013 (4) | 0.0050 (5) | −0.0004 (4) |
N2 | 0.0139 (6) | 0.0221 (6) | 0.0101 (5) | −0.0041 (5) | 0.0033 (5) | −0.0004 (5) |
N3 | 0.0185 (6) | 0.0228 (6) | 0.0149 (6) | −0.0070 (5) | 0.0034 (5) | 0.0003 (5) |
N4 | 0.0145 (5) | 0.0151 (5) | 0.0132 (6) | −0.0011 (4) | 0.0052 (5) | −0.0010 (4) |
N5 | 0.0142 (5) | 0.0152 (6) | 0.0157 (6) | 0.0003 (4) | 0.0071 (5) | 0.0002 (4) |
O1A | 0.0323 (9) | 0.0226 (7) | 0.0399 (8) | −0.0063 (6) | 0.0105 (6) | 0.0047 (6) |
O2 | 0.0238 (5) | 0.0174 (5) | 0.0239 (5) | −0.0050 (4) | 0.0045 (4) | −0.0010 (4) |
Geometric parameters (Å, º) top
Br1A—C7A | 1.897 (2) | C16A—H16A | 0.9900 |
Br1B—C7B | 1.916 (9) | C16A—H16B | 0.9900 |
Br2—C25 | 1.9043 (15) | C16A—C17A | 1.529 (3) |
C1—C2 | 1.4959 (19) | C16B—H16C | 0.9900 |
C1—N1 | 1.3081 (18) | C16B—H16D | 0.9900 |
C1—N2 | 1.3374 (18) | C16B—C17B | 1.53 (3) |
C2—C3 | 1.4884 (19) | C17A—H17A | 0.9900 |
C2—N3 | 1.2800 (19) | C17A—H17B | 0.9900 |
C3—H3A | 0.9800 | C17B—H17C | 0.9900 |
C3—H3B | 0.9800 | C17B—H17D | 0.9900 |
C3—H3C | 0.9800 | C18A—H18A | 0.9800 |
C4—C5A | 1.530 (3) | C18A—H18B | 0.9800 |
C4—C5B | 1.370 (18) | C18A—H18C | 0.9800 |
C4—C12A | 1.572 (3) | C18A—O1A | 1.411 (3) |
C4—C12B | 1.597 (18) | C18B—H18D | 0.9800 |
C4—N2 | 1.4509 (17) | C18B—H18E | 0.9800 |
C4—N3 | 1.4759 (18) | C18B—H18F | 0.9800 |
C5A—C6A | 1.375 (3) | C18B—O1B | 1.418 (19) |
C5A—C10A | 1.395 (2) | C19—C20 | 1.4940 (18) |
C5B—C6B | 1.3900 | C19—N1 | 1.3853 (18) |
C5B—C10B | 1.3900 | C19—N4 | 1.2983 (18) |
C6B—H6B | 0.9500 | C20—C21 | 1.4833 (19) |
C6B—C7B | 1.3900 | C20—N5 | 1.2837 (18) |
C7B—C8B | 1.3900 | C21—H21A | 0.9800 |
C8B—H8B | 0.9500 | C21—H21B | 0.9800 |
C8B—C9B | 1.3900 | C21—H21C | 0.9800 |
C9B—H9B | 0.9500 | C22—C23 | 1.5196 (19) |
C9B—C10B | 1.3900 | C22—C30 | 1.5778 (18) |
C10B—C11B | 1.516 (17) | C22—N4 | 1.4791 (17) |
C6A—H6A | 0.9500 | C22—N5 | 1.4635 (17) |
C6A—C7A | 1.390 (2) | C23—C24 | 1.386 (2) |
C7A—C8A | 1.384 (3) | C23—C28 | 1.3930 (19) |
C8A—H8A | 0.9500 | C24—H24 | 0.9500 |
C8A—C9A | 1.379 (3) | C24—C25 | 1.395 (2) |
C9A—H9A | 0.9500 | C25—C26 | 1.385 (2) |
C9A—C10A | 1.397 (3) | C26—H26 | 0.9500 |
C10A—C11A | 1.496 (4) | C26—C27 | 1.394 (2) |
C11A—H11A | 0.9900 | C27—H27 | 0.9500 |
C11A—H11B | 0.9900 | C27—C28 | 1.389 (2) |
C11A—C12A | 1.557 (3) | C28—C29 | 1.502 (2) |
C11B—H11C | 0.9900 | C29—H29A | 0.9900 |
C11B—H11D | 0.9900 | C29—H29B | 0.9900 |
C11B—C12B | 1.558 (18) | C29—C30 | 1.5544 (19) |
C12A—C13A | 1.523 (3) | C30—C31 | 1.531 (2) |
C12A—C17A | 1.543 (3) | C30—C35 | 1.5427 (18) |
C12B—C13B | 1.531 (18) | C31—H31A | 0.9900 |
C12B—C17B | 1.560 (18) | C31—H31B | 0.9900 |
C13A—H13A | 0.9900 | C31—C32 | 1.532 (2) |
C13A—H13B | 0.9900 | C32—H32A | 0.9900 |
C13A—C14A | 1.532 (4) | C32—H32B | 0.9900 |
C13B—H13C | 0.9900 | C32—C33 | 1.527 (2) |
C13B—H13D | 0.9900 | C33—H33 | 1.0000 |
C13B—C14B | 1.58 (4) | C33—C34 | 1.522 (2) |
C14A—H14A | 0.9900 | C33—O2 | 1.4318 (17) |
C14A—H14B | 0.9900 | C34—H34A | 0.9900 |
C14A—C15A | 1.523 (3) | C34—H34B | 0.9900 |
C14B—H14C | 0.9900 | C34—C35 | 1.5316 (19) |
C14B—H14D | 0.9900 | C35—H35A | 0.9900 |
C14B—C15B | 1.44 (2) | C35—H35B | 0.9900 |
C15A—H15A | 1.0000 | C36—H36A | 0.9800 |
C15A—C16A | 1.510 (3) | C36—H36B | 0.9800 |
C15A—O1A | 1.427 (2) | C36—H36C | 0.9800 |
C15B—H15B | 1.0000 | C36—O2 | 1.4232 (19) |
C15B—C16B | 1.49 (3) | N2—H2 | 0.826 (19) |
C15B—O1B | 1.477 (19) | | |
| | | |
N1—C1—C2 | 125.21 (12) | C15B—C16B—H16C | 109.1 |
N1—C1—N2 | 130.25 (13) | C15B—C16B—H16D | 109.1 |
N2—C1—C2 | 104.43 (12) | C15B—C16B—C17B | 112.3 (16) |
C3—C2—C1 | 123.63 (12) | H16C—C16B—H16D | 107.9 |
N3—C2—C1 | 111.73 (12) | C17B—C16B—H16C | 109.1 |
N3—C2—C3 | 124.63 (13) | C17B—C16B—H16D | 109.1 |
C2—C3—H3A | 109.5 | C12A—C17A—H17A | 109.0 |
C2—C3—H3B | 109.5 | C12A—C17A—H17B | 109.0 |
C2—C3—H3C | 109.5 | C16A—C17A—C12A | 112.77 (17) |
H3A—C3—H3B | 109.5 | C16A—C17A—H17A | 109.0 |
H3A—C3—H3C | 109.5 | C16A—C17A—H17B | 109.0 |
H3B—C3—H3C | 109.5 | H17A—C17A—H17B | 107.8 |
C5A—C4—C12A | 101.9 (2) | C12B—C17B—H17C | 108.1 |
C5B—C4—C12B | 109.6 (18) | C12B—C17B—H17D | 108.1 |
C5B—C4—N2 | 115.9 (15) | C16B—C17B—C12B | 116.9 (16) |
C5B—C4—N3 | 109 (2) | C16B—C17B—H17C | 108.1 |
N2—C4—C5A | 115.42 (19) | C16B—C17B—H17D | 108.1 |
N2—C4—C12A | 114.73 (16) | H17C—C17B—H17D | 107.3 |
N2—C4—C12B | 112.3 (10) | H18A—C18A—H18B | 109.5 |
N2—C4—N3 | 104.06 (11) | H18A—C18A—H18C | 109.5 |
N3—C4—C5A | 109.3 (2) | H18B—C18A—H18C | 109.5 |
N3—C4—C12A | 111.57 (14) | O1A—C18A—H18A | 109.5 |
N3—C4—C12B | 105.2 (9) | O1A—C18A—H18B | 109.5 |
C6A—C5A—C4 | 127.7 (2) | O1A—C18A—H18C | 109.5 |
C6A—C5A—C10A | 123.04 (17) | H18D—C18B—H18E | 109.5 |
C10A—C5A—C4 | 109.2 (2) | H18D—C18B—H18F | 109.5 |
C4—C5B—C6B | 129.4 (15) | H18E—C18B—H18F | 109.5 |
C4—C5B—C10B | 110.6 (15) | O1B—C18B—H18D | 109.5 |
C6B—C5B—C10B | 120.0 | O1B—C18B—H18E | 109.5 |
C5B—C6B—H6B | 120.0 | O1B—C18B—H18F | 109.5 |
C5B—C6B—C7B | 120.0 | N1—C19—C20 | 121.30 (12) |
C7B—C6B—H6B | 120.0 | N4—C19—C20 | 110.01 (12) |
C6B—C7B—Br1B | 119.7 (7) | N4—C19—N1 | 128.65 (12) |
C6B—C7B—C8B | 120.0 | C21—C20—C19 | 124.80 (12) |
C8B—C7B—Br1B | 120.3 (7) | N5—C20—C19 | 110.24 (12) |
C7B—C8B—H8B | 120.0 | N5—C20—C21 | 124.96 (12) |
C9B—C8B—C7B | 120.0 | C20—C21—H21A | 109.5 |
C9B—C8B—H8B | 120.0 | C20—C21—H21B | 109.5 |
C8B—C9B—H9B | 120.0 | C20—C21—H21C | 109.5 |
C8B—C9B—C10B | 120.0 | H21A—C21—H21B | 109.5 |
C10B—C9B—H9B | 120.0 | H21A—C21—H21C | 109.5 |
C5B—C10B—C11B | 109.3 (18) | H21B—C21—H21C | 109.5 |
C9B—C10B—C5B | 120.0 | C23—C22—C30 | 102.40 (11) |
C9B—C10B—C11B | 130.5 (19) | N4—C22—C23 | 109.30 (11) |
C5A—C6A—H6A | 121.8 | N4—C22—C30 | 110.81 (10) |
C5A—C6A—C7A | 116.49 (17) | N5—C22—C23 | 112.87 (11) |
C7A—C6A—H6A | 121.8 | N5—C22—C30 | 113.26 (11) |
C6A—C7A—Br1A | 118.23 (17) | N5—C22—N4 | 108.11 (10) |
C8A—C7A—Br1A | 119.18 (18) | C24—C23—C22 | 127.95 (12) |
C8A—C7A—C6A | 122.6 (2) | C24—C23—C28 | 122.05 (13) |
C7A—C8A—H8A | 120.2 | C28—C23—C22 | 109.99 (12) |
C9A—C8A—C7A | 119.57 (18) | C23—C24—H24 | 121.5 |
C9A—C8A—H8A | 120.2 | C23—C24—C25 | 117.00 (13) |
C8A—C9A—H9A | 120.1 | C25—C24—H24 | 121.5 |
C8A—C9A—C10A | 119.84 (19) | C24—C25—Br2 | 118.46 (11) |
C10A—C9A—H9A | 120.1 | C26—C25—Br2 | 119.30 (11) |
C5A—C10A—C9A | 118.5 (2) | C26—C25—C24 | 122.24 (14) |
C5A—C10A—C11A | 110.7 (3) | C25—C26—H26 | 120.2 |
C9A—C10A—C11A | 130.8 (3) | C25—C26—C27 | 119.60 (13) |
C10A—C11A—H11A | 111.1 | C27—C26—H26 | 120.2 |
C10A—C11A—H11B | 111.1 | C26—C27—H27 | 120.3 |
C10A—C11A—C12A | 103.2 (3) | C28—C27—C26 | 119.34 (13) |
H11A—C11A—H11B | 109.1 | C28—C27—H27 | 120.3 |
C12A—C11A—H11A | 111.1 | C23—C28—C29 | 110.39 (12) |
C12A—C11A—H11B | 111.1 | C27—C28—C23 | 119.76 (14) |
C10B—C11B—H11C | 110.5 | C27—C28—C29 | 129.84 (13) |
C10B—C11B—H11D | 110.5 | C28—C29—H29A | 111.0 |
C10B—C11B—C12B | 106.1 (18) | C28—C29—H29B | 111.0 |
H11C—C11B—H11D | 108.7 | C28—C29—C30 | 103.86 (11) |
C12B—C11B—H11C | 110.5 | H29A—C29—H29B | 109.0 |
C12B—C11B—H11D | 110.5 | C30—C29—H29A | 111.0 |
C11A—C12A—C4 | 101.9 (2) | C30—C29—H29B | 111.0 |
C13A—C12A—C4 | 111.3 (2) | C29—C30—C22 | 102.12 (11) |
C13A—C12A—C11A | 115.1 (3) | C31—C30—C22 | 112.43 (11) |
C13A—C12A—C17A | 110.0 (2) | C31—C30—C29 | 113.56 (12) |
C17A—C12A—C4 | 108.8 (2) | C31—C30—C35 | 107.73 (11) |
C17A—C12A—C11A | 109.5 (3) | C35—C30—C22 | 110.21 (11) |
C11B—C12B—C4 | 98.0 (15) | C35—C30—C29 | 110.76 (11) |
C11B—C12B—C17B | 104 (3) | C30—C31—H31A | 109.3 |
C13B—C12B—C4 | 117 (2) | C30—C31—H31B | 109.3 |
C13B—C12B—C11B | 115 (2) | C30—C31—C32 | 111.46 (12) |
C13B—C12B—C17B | 107.8 (18) | H31A—C31—H31B | 108.0 |
C17B—C12B—C4 | 114.4 (18) | C32—C31—H31A | 109.3 |
C12A—C13A—H13A | 109.1 | C32—C31—H31B | 109.3 |
C12A—C13A—H13B | 109.1 | C31—C32—H32A | 109.2 |
C12A—C13A—C14A | 112.4 (2) | C31—C32—H32B | 109.2 |
H13A—C13A—H13B | 107.9 | H32A—C32—H32B | 107.9 |
C14A—C13A—H13A | 109.1 | C33—C32—C31 | 111.93 (12) |
C14A—C13A—H13B | 109.1 | C33—C32—H32A | 109.2 |
C12B—C13B—H13C | 108.0 | C33—C32—H32B | 109.2 |
C12B—C13B—H13D | 108.0 | C32—C33—H33 | 109.1 |
C12B—C13B—C14B | 117 (2) | C34—C33—C32 | 111.51 (12) |
H13C—C13B—H13D | 107.2 | C34—C33—H33 | 109.1 |
C14B—C13B—H13C | 108.0 | O2—C33—C32 | 110.57 (12) |
C14B—C13B—H13D | 108.0 | O2—C33—H33 | 109.1 |
C13A—C14A—H14A | 109.5 | O2—C33—C34 | 107.43 (11) |
C13A—C14A—H14B | 109.5 | C33—C34—H34A | 109.2 |
H14A—C14A—H14B | 108.1 | C33—C34—H34B | 109.2 |
C15A—C14A—C13A | 110.71 (17) | C33—C34—C35 | 112.26 (11) |
C15A—C14A—H14A | 109.5 | H34A—C34—H34B | 107.9 |
C15A—C14A—H14B | 109.5 | C35—C34—H34A | 109.2 |
C13B—C14B—H14C | 109.2 | C35—C34—H34B | 109.2 |
C13B—C14B—H14D | 109.2 | C30—C35—H35A | 109.1 |
H14C—C14B—H14D | 107.9 | C30—C35—H35B | 109.1 |
C15B—C14B—C13B | 112.1 (18) | C34—C35—C30 | 112.46 (11) |
C15B—C14B—H14C | 109.2 | C34—C35—H35A | 109.1 |
C15B—C14B—H14D | 109.2 | C34—C35—H35B | 109.1 |
C14A—C15A—H15A | 109.0 | H35A—C35—H35B | 107.8 |
C16A—C15A—C14A | 110.03 (18) | H36A—C36—H36B | 109.5 |
C16A—C15A—H15A | 109.0 | H36A—C36—H36C | 109.5 |
O1A—C15A—C14A | 113.11 (17) | H36B—C36—H36C | 109.5 |
O1A—C15A—H15A | 109.0 | O2—C36—H36A | 109.5 |
O1A—C15A—C16A | 106.73 (18) | O2—C36—H36B | 109.5 |
C14B—C15B—H15B | 108.8 | O2—C36—H36C | 109.5 |
C14B—C15B—C16B | 111.8 (14) | C1—N1—C19 | 116.17 (12) |
C14B—C15B—O1B | 108.8 (14) | C1—N2—C4 | 111.11 (12) |
C16B—C15B—H15B | 108.8 | C1—N2—H2 | 119.9 (12) |
O1B—C15B—H15B | 108.8 | C4—N2—H2 | 128.8 (12) |
O1B—C15B—C16B | 109.8 (13) | C2—N3—C4 | 108.41 (12) |
C15A—C16A—H16A | 109.3 | C19—N4—C22 | 105.32 (11) |
C15A—C16A—H16B | 109.3 | C20—N5—C22 | 106.28 (11) |
C15A—C16A—C17A | 111.51 (16) | C18A—O1A—C15A | 114.26 (18) |
H16A—C16A—H16B | 108.0 | C18B—O1B—C15B | 115.5 (11) |
C17A—C16A—H16A | 109.3 | C36—O2—C33 | 113.31 (11) |
C17A—C16A—H16B | 109.3 | | |
| | | |
Br1A—C7A—C8A—C9A | 179.2 (4) | C22—C23—C24—C25 | 178.69 (13) |
Br1B—C7B—C8B—C9B | −178 (3) | C22—C23—C28—C27 | −178.89 (12) |
Br2—C25—C26—C27 | 178.87 (10) | C22—C23—C28—C29 | 1.91 (15) |
C1—C2—N3—C4 | 1.44 (16) | C22—C30—C31—C32 | −179.77 (12) |
C2—C1—N1—C19 | −170.60 (12) | C22—C30—C35—C34 | 179.62 (11) |
C2—C1—N2—C4 | 5.17 (15) | C23—C22—C30—C29 | 31.83 (12) |
C3—C2—N3—C4 | −179.96 (13) | C23—C22—C30—C31 | 153.90 (11) |
C4—C5A—C6A—C7A | −179.2 (5) | C23—C22—C30—C35 | −85.90 (12) |
C4—C5A—C10A—C9A | −180.0 (4) | C23—C22—N4—C19 | 125.11 (12) |
C4—C5A—C10A—C11A | 1.7 (5) | C23—C22—N5—C20 | −122.43 (12) |
C4—C5B—C6B—C7B | 178 (5) | C23—C24—C25—Br2 | −179.34 (10) |
C4—C5B—C10B—C9B | −179 (4) | C23—C24—C25—C26 | 0.1 (2) |
C4—C5B—C10B—C11B | 7 (4) | C23—C28—C29—C30 | 19.18 (14) |
C4—C12A—C13A—C14A | 173.7 (2) | C24—C23—C28—C27 | −0.3 (2) |
C4—C12A—C17A—C16A | −173.89 (18) | C24—C23—C28—C29 | −179.47 (12) |
C4—C12B—C13B—C14B | 172 (2) | C24—C25—C26—C27 | −0.5 (2) |
C4—C12B—C17B—C16B | −174.2 (17) | C25—C26—C27—C28 | 0.6 (2) |
C5A—C4—C12A—C11A | 34.2 (4) | C26—C27—C28—C23 | −0.2 (2) |
C5A—C4—C12A—C13A | 157.4 (3) | C26—C27—C28—C29 | 178.82 (13) |
C5A—C4—C12A—C17A | −81.3 (3) | C27—C28—C29—C30 | −159.92 (14) |
C5A—C4—N2—C1 | −124.3 (3) | C28—C23—C24—C25 | 0.3 (2) |
C5A—C4—N3—C2 | 125.48 (18) | C28—C29—C30—C22 | −31.12 (13) |
C5A—C6A—C7A—Br1A | −179.6 (4) | C28—C29—C30—C31 | −152.41 (11) |
C5A—C6A—C7A—C8A | −1.2 (2) | C28—C29—C30—C35 | 86.22 (13) |
C5A—C10A—C11A—C12A | 20.8 (5) | C29—C30—C31—C32 | −64.44 (16) |
C5B—C4—C12B—C11B | 25 (3) | C29—C30—C35—C34 | 67.36 (15) |
C5B—C4—C12B—C13B | 149 (3) | C30—C22—C23—C24 | 159.75 (13) |
C5B—C4—C12B—C17B | −84 (3) | C30—C22—C23—C28 | −21.74 (14) |
C5B—C4—N2—C1 | −124 (2) | C30—C22—N4—C19 | −122.77 (12) |
C5B—C4—N3—C2 | 125.9 (11) | C30—C22—N5—C20 | 121.78 (12) |
C5B—C6B—C7B—Br1B | 178 (3) | C30—C31—C32—C33 | −57.70 (17) |
C5B—C6B—C7B—C8B | 0.0 | C31—C30—C35—C34 | −57.38 (15) |
C5B—C10B—C11B—C12B | 10 (4) | C31—C32—C33—C34 | 52.46 (17) |
C6B—C5B—C10B—C9B | 0.0 | C31—C32—C33—O2 | 171.92 (12) |
C6B—C5B—C10B—C11B | −175 (4) | C32—C33—C34—C35 | −50.88 (16) |
C6B—C7B—C8B—C9B | 0.0 | C32—C33—O2—C36 | 81.23 (16) |
C7B—C8B—C9B—C10B | 0.0 | C33—C34—C35—C30 | 54.70 (16) |
C8B—C9B—C10B—C5B | 0.0 | C34—C33—O2—C36 | −156.88 (12) |
C8B—C9B—C10B—C11B | 174 (5) | C35—C30—C31—C32 | 58.61 (16) |
C9B—C10B—C11B—C12B | −164 (3) | N1—C1—C2—C3 | −6.3 (2) |
C10B—C5B—C6B—C7B | 0.0 | N1—C1—C2—N3 | 172.30 (13) |
C10B—C11B—C12B—C4 | −20 (4) | N1—C1—N2—C4 | −171.09 (14) |
C10B—C11B—C12B—C13B | −145 (3) | N1—C19—C20—C21 | 2.0 (2) |
C10B—C11B—C12B—C17B | 98 (4) | N1—C19—C20—N5 | −176.99 (12) |
C6A—C5A—C10A—C9A | 0.1 (3) | N1—C19—N4—C22 | 175.98 (13) |
C6A—C5A—C10A—C11A | −178.3 (5) | N2—C1—C2—C3 | 177.18 (13) |
C6A—C7A—C8A—C9A | 0.7 (3) | N2—C1—C2—N3 | −4.21 (16) |
C7A—C8A—C9A—C10A | 0.2 (3) | N2—C1—N1—C19 | 5.0 (2) |
C8A—C9A—C10A—C5A | −0.6 (3) | N2—C4—C5A—C6A | 31.9 (4) |
C8A—C9A—C10A—C11A | 177.4 (6) | N2—C4—C5A—C10A | −148.1 (2) |
C9A—C10A—C11A—C12A | −157.3 (4) | N2—C4—C5B—C6B | 32 (4) |
C10A—C5A—C6A—C7A | 0.8 (2) | N2—C4—C5B—C10B | −149.3 (17) |
C10A—C11A—C12A—C4 | −33.7 (5) | N2—C4—C12A—C11A | 159.7 (3) |
C10A—C11A—C12A—C13A | −154.2 (4) | N2—C4—C12A—C13A | −77.2 (3) |
C10A—C11A—C12A—C17A | 81.4 (4) | N2—C4—C12A—C17A | 44.1 (2) |
C11A—C12A—C13A—C14A | −71.1 (4) | N2—C4—C12B—C11B | 156 (2) |
C11A—C12A—C17A—C16A | 75.6 (2) | N2—C4—C12B—C13B | −81 (2) |
C11B—C12B—C13B—C14B | −74 (3) | N2—C4—C12B—C17B | 46 (2) |
C11B—C12B—C17B—C16B | 80 (2) | N2—C4—N3—C2 | 1.64 (16) |
C12A—C4—C5A—C6A | 156.9 (3) | N3—C4—C5A—C6A | −85.0 (4) |
C12A—C4—C5A—C10A | −23.1 (3) | N3—C4—C5A—C10A | 95.0 (3) |
C12A—C4—N2—C1 | 117.70 (15) | N3—C4—C5B—C6B | −85 (3) |
C12A—C4—N3—C2 | −122.61 (16) | N3—C4—C5B—C10B | 94 (2) |
C12A—C13A—C14A—C15A | −57.2 (3) | N3—C4—C12A—C11A | −82.3 (3) |
C12B—C4—C5B—C6B | 161 (3) | N3—C4—C12A—C13A | 40.8 (3) |
C12B—C4—C5B—C10B | −21 (3) | N3—C4—C12A—C17A | 162.13 (15) |
C12B—C4—N2—C1 | 108.8 (10) | N3—C4—C12B—C11B | −92 (2) |
C12B—C4—N3—C2 | −116.6 (11) | N3—C4—C12B—C13B | 31 (2) |
C12B—C13B—C14B—C15B | −51 (3) | N3—C4—C12B—C17B | 159.0 (16) |
C13A—C12A—C17A—C16A | −51.7 (3) | N3—C4—N2—C1 | −4.47 (16) |
C13A—C14A—C15A—C16A | 58.1 (3) | N4—C19—C20—C21 | 179.78 (13) |
C13A—C14A—C15A—O1A | 177.4 (2) | N4—C19—C20—N5 | 0.82 (16) |
C13B—C12B—C17B—C16B | −42 (3) | N4—C19—N1—C1 | −10.6 (2) |
C13B—C14B—C15B—C16B | 55 (2) | N4—C22—C23—C24 | −82.71 (16) |
C13B—C14B—C15B—O1B | 176.8 (17) | N4—C22—C23—C28 | 95.80 (13) |
C14A—C15A—C16A—C17A | −57.1 (2) | N4—C22—C30—C29 | −84.63 (12) |
C14A—C15A—O1A—C18A | 74.0 (3) | N4—C22—C30—C31 | 37.44 (15) |
C14B—C15B—C16B—C17B | −56 (2) | N4—C22—C30—C35 | 157.64 (11) |
C14B—C15B—O1B—C18B | 161.4 (13) | N4—C22—N5—C20 | −1.40 (14) |
C15A—C16A—C17A—C12A | 54.7 (2) | N5—C22—C23—C24 | 37.64 (19) |
C15B—C16B—C17B—C12B | 51 (2) | N5—C22—C23—C28 | −143.85 (12) |
C16A—C15A—O1A—C18A | −164.90 (18) | N5—C22—C30—C29 | 153.68 (11) |
C16B—C15B—O1B—C18B | −75.9 (16) | N5—C22—C30—C31 | −84.25 (14) |
C17A—C12A—C13A—C14A | 53.0 (3) | N5—C22—C30—C35 | 35.95 (15) |
C17B—C12B—C13B—C14B | 41 (3) | N5—C22—N4—C19 | 1.89 (14) |
C19—C20—N5—C22 | 0.43 (14) | O1A—C15A—C16A—C17A | 179.84 (15) |
C20—C19—N1—C1 | 166.76 (12) | O1B—C15B—C16B—C17B | −177.2 (14) |
C20—C19—N4—C22 | −1.62 (14) | O2—C33—C34—C35 | −172.18 (11) |
C21—C20—N5—C22 | −178.53 (13) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···N4 | 0.826 (19) | 2.064 (18) | 2.6456 (16) | 127.2 (15) |
(
R,
S)/(
S,
R)-(1
r,1'
S,4
S,
E)-6'-Bromo-
N-[(1
r,1'
S,4
S)-6'-bromo-4-methoxy-4''-methyl-3'
H-dispiro[cyclohexane-1,2'-indene-1',2''-imidazol-5''-yl]-4-methoxy-4''-methyl-3'
H-dispiro[cyclohexane-1,2'-indene-1',2''-imidazol]-5''-imine (1)
top
Crystal data top
C36H41Br2N5O2 | F(000) = 1512 |
Mr = 735.56 | Dx = 1.424 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54178 Å |
a = 13.19297 (6) Å | Cell parameters from 74158 reflections |
b = 17.60010 (8) Å | θ = 2.5–70.4° |
c = 15.25349 (8) Å | µ = 3.30 mm−1 |
β = 104.4018 (5)° | T = 100 K |
V = 3430.52 (3) Å3 | Block, colourless |
Z = 4 | 0.31 × 0.07 × 0.05 mm |
Data collection top
Rigaku 007HF equipped with Varimax confocal mirrors and an AFC11 goniometer
and HyPix 6000 detector diffractometer | 6285 independent reflections |
Radiation source: Rotating anode, Rigaku 007 HF | 6257 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.023 |
Detector resolution: 10 pixels mm-1 | θmax = 68.3°, θmin = 3.9° |
profile data from ω–scans | h = −15→15 |
Absorption correction: gaussian (CrysAlisPro; Rigaku OD, 2019) | k = −21→21 |
Tmin = 0.654, Tmax = 1.000 | l = −18→18 |
97773 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: dual |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.024 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.057 | w = 1/[σ2(Fo2) + (0.0248P)2 + 2.9185P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max = 0.001 |
6285 reflections | Δρmax = 0.33 e Å−3 |
413 parameters | Δρmin = −0.44 e Å−3 |
1 restraint | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. This diastereoisomer has crystallised in the centrosymmetric space group
P21/n; meaning that both SS and RR forms of the API must be present in equal
amounts within the crystal. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Br1 | 0.57538 (2) | 0.34738 (2) | 0.89948 (2) | 0.02177 (5) | |
Br2 | 0.14814 (2) | 0.66375 (2) | 0.24065 (2) | 0.02990 (6) | |
C1 | 0.15668 (11) | 0.50387 (8) | 0.69473 (9) | 0.0129 (3) | |
C2 | 0.13914 (11) | 0.52942 (8) | 0.78320 (10) | 0.0144 (3) | |
C3 | 0.04172 (12) | 0.51294 (10) | 0.81180 (11) | 0.0214 (3) | |
H3A | 0.048466 | 0.532334 | 0.873213 | 0.032* | |
H3B | 0.030082 | 0.457923 | 0.810962 | 0.032* | |
H3C | −0.017676 | 0.537693 | 0.770109 | 0.032* | |
C4 | 0.29513 (11) | 0.57251 (8) | 0.77417 (9) | 0.0133 (3) | |
C5 | 0.39917 (11) | 0.54110 (8) | 0.82716 (9) | 0.0140 (3) | |
C6 | 0.43135 (12) | 0.46632 (9) | 0.83361 (10) | 0.0162 (3) | |
H6 | 0.388386 | 0.427279 | 0.800815 | 0.019* | |
C7 | 0.52897 (12) | 0.45036 (9) | 0.88989 (10) | 0.0173 (3) | |
C8 | 0.59218 (12) | 0.50677 (9) | 0.93894 (10) | 0.0185 (3) | |
H8 | 0.657774 | 0.494104 | 0.978454 | 0.022* | |
C9 | 0.55861 (12) | 0.58207 (9) | 0.92970 (10) | 0.0176 (3) | |
H9 | 0.601620 | 0.621205 | 0.962229 | 0.021* | |
C10 | 0.46163 (12) | 0.59959 (9) | 0.87251 (10) | 0.0157 (3) | |
C11 | 0.40713 (12) | 0.67508 (9) | 0.84824 (10) | 0.0175 (3) | |
H11A | 0.456675 | 0.714295 | 0.837849 | 0.021* | |
H11B | 0.374767 | 0.692667 | 0.896646 | 0.021* | |
C12 | 0.32230 (11) | 0.65767 (8) | 0.75962 (10) | 0.0136 (3) | |
C13 | 0.22456 (11) | 0.70763 (8) | 0.74388 (11) | 0.0174 (3) | |
H13A | 0.168199 | 0.684004 | 0.696541 | 0.021* | |
H13B | 0.200517 | 0.709635 | 0.800360 | 0.021* | |
C14 | 0.24256 (13) | 0.78862 (9) | 0.71501 (13) | 0.0251 (4) | |
H14A | 0.175330 | 0.816570 | 0.701148 | 0.030* | |
H14B | 0.291377 | 0.814993 | 0.765677 | 0.030* | |
C15 | 0.28730 (12) | 0.78963 (9) | 0.63259 (12) | 0.0217 (3) | |
H15 | 0.236081 | 0.765257 | 0.580750 | 0.026* | |
C16 | 0.38937 (12) | 0.74506 (8) | 0.65217 (11) | 0.0177 (3) | |
H16A | 0.441114 | 0.769143 | 0.702812 | 0.021* | |
H16B | 0.418255 | 0.745545 | 0.598164 | 0.021* | |
C17 | 0.36986 (11) | 0.66312 (8) | 0.67692 (10) | 0.0145 (3) | |
H17A | 0.436898 | 0.634951 | 0.690158 | 0.017* | |
H17B | 0.321797 | 0.638505 | 0.624337 | 0.017* | |
C18 | 0.33503 (15) | 0.87778 (11) | 0.53124 (14) | 0.0355 (4) | |
H18A | 0.294890 | 0.844671 | 0.483397 | 0.053* | |
H18B | 0.409455 | 0.864737 | 0.543539 | 0.053* | |
H18C | 0.325097 | 0.930878 | 0.511642 | 0.053* | |
C19 | 0.12763 (11) | 0.43884 (8) | 0.56219 (9) | 0.0124 (3) | |
C20 | 0.07361 (11) | 0.38220 (8) | 0.49353 (9) | 0.0123 (3) | |
C21 | −0.02914 (11) | 0.34673 (8) | 0.49334 (10) | 0.0159 (3) | |
H21A | −0.085343 | 0.383654 | 0.471467 | 0.024* | |
H21B | −0.029155 | 0.330987 | 0.554960 | 0.024* | |
H21C | −0.040429 | 0.302236 | 0.453450 | 0.024* | |
C22 | 0.22276 (11) | 0.41636 (8) | 0.46271 (9) | 0.0117 (3) | |
C23 | 0.23216 (11) | 0.46484 (8) | 0.38289 (9) | 0.0123 (3) | |
C24 | 0.18603 (11) | 0.53442 (8) | 0.35623 (10) | 0.0158 (3) | |
H24 | 0.141328 | 0.558250 | 0.388096 | 0.019* | |
C25 | 0.20823 (11) | 0.56779 (9) | 0.28060 (11) | 0.0189 (3) | |
C26 | 0.27239 (12) | 0.53353 (10) | 0.23273 (11) | 0.0212 (3) | |
H26 | 0.285223 | 0.557722 | 0.180869 | 0.025* | |
C27 | 0.31778 (12) | 0.46373 (9) | 0.26092 (10) | 0.0196 (3) | |
H27 | 0.362047 | 0.439791 | 0.228716 | 0.023* | |
C28 | 0.29774 (11) | 0.42925 (8) | 0.33682 (9) | 0.0138 (3) | |
C29 | 0.33843 (11) | 0.35584 (8) | 0.38287 (10) | 0.0144 (3) | |
H29A | 0.412775 | 0.347934 | 0.383041 | 0.017* | |
H29B | 0.296824 | 0.312047 | 0.352846 | 0.017* | |
C30 | 0.32551 (11) | 0.36684 (8) | 0.48025 (9) | 0.0118 (3) | |
C31 | 0.31641 (12) | 0.29247 (8) | 0.52930 (10) | 0.0166 (3) | |
H31A | 0.260115 | 0.261062 | 0.491214 | 0.020* | |
H31B | 0.296945 | 0.303725 | 0.586573 | 0.020* | |
C32 | 0.41931 (12) | 0.24756 (9) | 0.55019 (11) | 0.0196 (3) | |
H32A | 0.411332 | 0.201096 | 0.584435 | 0.023* | |
H32B | 0.435041 | 0.231742 | 0.492700 | 0.023* | |
C33 | 0.51027 (12) | 0.29466 (9) | 0.60523 (11) | 0.0219 (3) | |
H33 | 0.497643 | 0.305715 | 0.665943 | 0.026* | |
C34 | 0.52114 (12) | 0.36922 (9) | 0.55827 (11) | 0.0189 (3) | |
H34A | 0.541834 | 0.358860 | 0.501331 | 0.023* | |
H34B | 0.576778 | 0.400299 | 0.597697 | 0.023* | |
C35 | 0.41793 (11) | 0.41339 (8) | 0.53713 (10) | 0.0152 (3) | |
H35A | 0.426159 | 0.460335 | 0.503813 | 0.018* | |
H35B | 0.401738 | 0.428523 | 0.594668 | 0.018* | |
C36 | 0.62272 (17) | 0.19682 (12) | 0.68103 (15) | 0.0448 (5) | |
H36A | 0.573730 | 0.155573 | 0.657157 | 0.067* | |
H36B | 0.609719 | 0.215570 | 0.737741 | 0.067* | |
H36C | 0.694655 | 0.177843 | 0.692376 | 0.067* | |
N1 | 0.09138 (9) | 0.46044 (7) | 0.63455 (8) | 0.0131 (2) | |
N2 | 0.24915 (9) | 0.53150 (7) | 0.69163 (8) | 0.0122 (2) | |
H2 | 0.2733 (13) | 0.5217 (10) | 0.6481 (11) | 0.015* | |
N3 | 0.21762 (9) | 0.56719 (7) | 0.82906 (8) | 0.0151 (3) | |
N4 | 0.21425 (9) | 0.45973 (7) | 0.54149 (8) | 0.0124 (2) | |
N5 | 0.12793 (9) | 0.36819 (7) | 0.43652 (8) | 0.0130 (2) | |
O1 | 0.29971 (10) | 0.86771 (7) | 0.61123 (9) | 0.0308 (3) | |
O2 | 0.60841 (9) | 0.25660 (7) | 0.61737 (8) | 0.0303 (3) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Br1 | 0.02290 (9) | 0.01996 (9) | 0.02374 (9) | 0.00478 (6) | 0.00824 (7) | 0.00669 (6) |
Br2 | 0.02056 (9) | 0.02260 (10) | 0.04550 (12) | 0.00515 (7) | 0.00627 (8) | 0.01708 (8) |
C1 | 0.0132 (7) | 0.0124 (7) | 0.0139 (7) | 0.0012 (5) | 0.0048 (5) | −0.0003 (5) |
C2 | 0.0155 (7) | 0.0142 (7) | 0.0147 (7) | 0.0000 (5) | 0.0063 (6) | −0.0019 (5) |
C3 | 0.0190 (8) | 0.0274 (8) | 0.0211 (8) | −0.0053 (6) | 0.0113 (6) | −0.0069 (7) |
C4 | 0.0136 (7) | 0.0146 (7) | 0.0124 (7) | −0.0023 (5) | 0.0047 (5) | −0.0039 (5) |
C5 | 0.0144 (7) | 0.0169 (7) | 0.0117 (6) | −0.0030 (6) | 0.0051 (5) | −0.0012 (5) |
C6 | 0.0175 (7) | 0.0166 (7) | 0.0154 (7) | −0.0039 (6) | 0.0056 (6) | −0.0005 (6) |
C7 | 0.0187 (7) | 0.0196 (8) | 0.0159 (7) | 0.0004 (6) | 0.0086 (6) | 0.0035 (6) |
C8 | 0.0137 (7) | 0.0288 (8) | 0.0136 (7) | −0.0005 (6) | 0.0046 (6) | 0.0023 (6) |
C9 | 0.0163 (7) | 0.0232 (8) | 0.0137 (7) | −0.0057 (6) | 0.0045 (6) | −0.0030 (6) |
C10 | 0.0167 (7) | 0.0184 (7) | 0.0130 (7) | −0.0037 (6) | 0.0056 (6) | −0.0025 (6) |
C11 | 0.0183 (7) | 0.0163 (7) | 0.0168 (7) | −0.0038 (6) | 0.0026 (6) | −0.0059 (6) |
C12 | 0.0139 (7) | 0.0121 (7) | 0.0153 (7) | −0.0013 (5) | 0.0044 (6) | −0.0039 (5) |
C13 | 0.0152 (7) | 0.0157 (7) | 0.0229 (7) | 0.0009 (6) | 0.0078 (6) | −0.0045 (6) |
C14 | 0.0223 (8) | 0.0148 (8) | 0.0410 (10) | 0.0037 (6) | 0.0129 (7) | −0.0023 (7) |
C15 | 0.0190 (8) | 0.0123 (7) | 0.0334 (9) | 0.0004 (6) | 0.0057 (7) | 0.0040 (6) |
C16 | 0.0165 (7) | 0.0137 (7) | 0.0237 (8) | −0.0008 (6) | 0.0068 (6) | 0.0007 (6) |
C17 | 0.0144 (7) | 0.0132 (7) | 0.0171 (7) | 0.0007 (5) | 0.0062 (6) | −0.0012 (5) |
C18 | 0.0284 (9) | 0.0273 (10) | 0.0515 (12) | 0.0043 (8) | 0.0111 (8) | 0.0194 (9) |
C19 | 0.0114 (7) | 0.0118 (7) | 0.0135 (7) | −0.0003 (5) | 0.0020 (5) | 0.0002 (5) |
C20 | 0.0121 (7) | 0.0122 (7) | 0.0122 (6) | −0.0002 (5) | 0.0021 (5) | 0.0004 (5) |
C21 | 0.0124 (7) | 0.0169 (7) | 0.0183 (7) | −0.0033 (6) | 0.0040 (6) | −0.0031 (6) |
C22 | 0.0119 (7) | 0.0129 (7) | 0.0106 (6) | −0.0026 (5) | 0.0032 (5) | −0.0029 (5) |
C23 | 0.0100 (6) | 0.0149 (7) | 0.0114 (6) | −0.0030 (5) | 0.0014 (5) | −0.0005 (5) |
C24 | 0.0109 (7) | 0.0174 (7) | 0.0190 (7) | −0.0005 (6) | 0.0033 (6) | −0.0003 (6) |
C25 | 0.0113 (7) | 0.0187 (8) | 0.0245 (8) | −0.0005 (6) | 0.0005 (6) | 0.0061 (6) |
C26 | 0.0171 (7) | 0.0278 (9) | 0.0193 (7) | −0.0013 (6) | 0.0055 (6) | 0.0090 (6) |
C27 | 0.0177 (7) | 0.0271 (8) | 0.0155 (7) | 0.0024 (6) | 0.0072 (6) | 0.0024 (6) |
C28 | 0.0128 (7) | 0.0165 (7) | 0.0117 (6) | −0.0011 (5) | 0.0025 (5) | −0.0006 (5) |
C29 | 0.0158 (7) | 0.0157 (7) | 0.0127 (7) | 0.0015 (6) | 0.0050 (5) | −0.0011 (5) |
C30 | 0.0120 (7) | 0.0122 (7) | 0.0114 (6) | −0.0005 (5) | 0.0033 (5) | −0.0004 (5) |
C31 | 0.0183 (7) | 0.0153 (7) | 0.0171 (7) | −0.0015 (6) | 0.0059 (6) | 0.0021 (6) |
C32 | 0.0223 (8) | 0.0158 (7) | 0.0204 (7) | 0.0020 (6) | 0.0050 (6) | 0.0051 (6) |
C33 | 0.0211 (8) | 0.0235 (8) | 0.0184 (7) | 0.0055 (6) | −0.0002 (6) | 0.0026 (6) |
C34 | 0.0137 (7) | 0.0205 (8) | 0.0202 (7) | −0.0003 (6) | −0.0001 (6) | −0.0012 (6) |
C35 | 0.0138 (7) | 0.0153 (7) | 0.0154 (7) | −0.0013 (6) | 0.0017 (5) | −0.0018 (6) |
C36 | 0.0391 (11) | 0.0338 (11) | 0.0487 (12) | 0.0068 (9) | −0.0132 (9) | 0.0160 (9) |
N1 | 0.0121 (6) | 0.0147 (6) | 0.0133 (6) | −0.0017 (5) | 0.0047 (5) | −0.0032 (5) |
N2 | 0.0123 (6) | 0.0135 (6) | 0.0119 (6) | −0.0016 (5) | 0.0050 (5) | −0.0042 (5) |
N3 | 0.0166 (6) | 0.0160 (6) | 0.0144 (6) | −0.0010 (5) | 0.0068 (5) | −0.0025 (5) |
N4 | 0.0129 (6) | 0.0133 (6) | 0.0119 (6) | −0.0009 (5) | 0.0046 (5) | −0.0021 (5) |
N5 | 0.0112 (6) | 0.0140 (6) | 0.0130 (6) | −0.0023 (5) | 0.0016 (5) | −0.0003 (5) |
O1 | 0.0299 (6) | 0.0148 (6) | 0.0502 (8) | 0.0034 (5) | 0.0149 (6) | 0.0090 (5) |
O2 | 0.0235 (6) | 0.0282 (7) | 0.0333 (7) | 0.0095 (5) | −0.0042 (5) | 0.0053 (5) |
Geometric parameters (Å, º) top
Br1—C7 | 1.9071 (16) | C19—C20 | 1.4925 (19) |
Br2—C25 | 1.9005 (15) | C19—N1 | 1.3616 (18) |
C1—C2 | 1.4940 (19) | C19—N4 | 1.3115 (18) |
C1—N1 | 1.3327 (19) | C20—C21 | 1.4917 (19) |
C1—N2 | 1.3250 (19) | C20—N5 | 1.2809 (19) |
C2—C3 | 1.485 (2) | C21—H21A | 0.9800 |
C2—N3 | 1.2818 (19) | C21—H21B | 0.9800 |
C3—H3A | 0.9800 | C21—H21C | 0.9800 |
C3—H3B | 0.9800 | C22—C23 | 1.5169 (19) |
C3—H3C | 0.9800 | C22—C30 | 1.5775 (19) |
C4—C5 | 1.514 (2) | C22—N4 | 1.4513 (17) |
C4—C12 | 1.5697 (19) | C22—N5 | 1.4816 (17) |
C4—N2 | 1.4471 (18) | C23—C24 | 1.383 (2) |
C4—N3 | 1.4770 (17) | C23—C28 | 1.392 (2) |
C5—C6 | 1.379 (2) | C24—H24 | 0.9500 |
C5—C10 | 1.390 (2) | C24—C25 | 1.389 (2) |
C6—H6 | 0.9500 | C25—C26 | 1.386 (2) |
C6—C7 | 1.387 (2) | C26—H26 | 0.9500 |
C7—C8 | 1.389 (2) | C26—C27 | 1.387 (2) |
C8—H8 | 0.9500 | C27—H27 | 0.9500 |
C8—C9 | 1.393 (2) | C27—C28 | 1.390 (2) |
C9—H9 | 0.9500 | C28—C29 | 1.504 (2) |
C9—C10 | 1.392 (2) | C29—H29A | 0.9900 |
C10—C11 | 1.512 (2) | C29—H29B | 0.9900 |
C11—H11A | 0.9900 | C29—C30 | 1.5489 (19) |
C11—H11B | 0.9900 | C30—C31 | 1.5271 (19) |
C11—C12 | 1.556 (2) | C30—C35 | 1.5441 (19) |
C12—C13 | 1.530 (2) | C31—H31A | 0.9900 |
C12—C17 | 1.545 (2) | C31—H31B | 0.9900 |
C13—H13A | 0.9900 | C31—C32 | 1.534 (2) |
C13—H13B | 0.9900 | C32—H32A | 0.9900 |
C13—C14 | 1.528 (2) | C32—H32B | 0.9900 |
C14—H14A | 0.9900 | C32—C33 | 1.527 (2) |
C14—H14B | 0.9900 | C33—H33 | 1.0000 |
C14—C15 | 1.516 (2) | C33—C34 | 1.519 (2) |
C15—H15 | 1.0000 | C33—O2 | 1.4284 (19) |
C15—C16 | 1.522 (2) | C34—H34A | 0.9900 |
C15—O1 | 1.4311 (19) | C34—H34B | 0.9900 |
C16—H16A | 0.9900 | C34—C35 | 1.531 (2) |
C16—H16B | 0.9900 | C35—H35A | 0.9900 |
C16—C17 | 1.529 (2) | C35—H35B | 0.9900 |
C17—H17A | 0.9900 | C36—H36A | 0.9800 |
C17—H17B | 0.9900 | C36—H36B | 0.9800 |
C18—H18A | 0.9800 | C36—H36C | 0.9800 |
C18—H18B | 0.9800 | C36—O2 | 1.412 (2) |
C18—H18C | 0.9800 | N2—H2 | 0.823 (14) |
C18—O1 | 1.421 (2) | | |
| | | |
N1—C1—C2 | 125.17 (13) | N5—C20—C21 | 125.43 (13) |
N2—C1—C2 | 105.82 (12) | C20—C21—H21A | 109.5 |
N2—C1—N1 | 128.98 (13) | C20—C21—H21B | 109.5 |
C3—C2—C1 | 123.12 (13) | C20—C21—H21C | 109.5 |
N3—C2—C1 | 111.32 (12) | H21A—C21—H21B | 109.5 |
N3—C2—C3 | 125.56 (13) | H21A—C21—H21C | 109.5 |
C2—C3—H3A | 109.5 | H21B—C21—H21C | 109.5 |
C2—C3—H3B | 109.5 | C23—C22—C30 | 102.04 (11) |
C2—C3—H3C | 109.5 | N4—C22—C23 | 114.04 (12) |
H3A—C3—H3B | 109.5 | N4—C22—C30 | 112.98 (11) |
H3A—C3—H3C | 109.5 | N4—C22—N5 | 106.87 (11) |
H3B—C3—H3C | 109.5 | N5—C22—C23 | 109.73 (11) |
C5—C4—C12 | 102.45 (11) | N5—C22—C30 | 111.22 (11) |
N2—C4—C5 | 114.25 (12) | C24—C23—C22 | 128.04 (13) |
N2—C4—C12 | 114.48 (12) | C24—C23—C28 | 122.24 (13) |
N2—C4—N3 | 105.19 (11) | C28—C23—C22 | 109.71 (12) |
N3—C4—C5 | 109.74 (11) | C23—C24—H24 | 121.6 |
N3—C4—C12 | 110.81 (11) | C23—C24—C25 | 116.76 (14) |
C6—C5—C4 | 127.50 (13) | C25—C24—H24 | 121.6 |
C6—C5—C10 | 122.50 (14) | C24—C25—Br2 | 118.99 (12) |
C10—C5—C4 | 109.99 (13) | C26—C25—Br2 | 118.59 (12) |
C5—C6—H6 | 121.3 | C26—C25—C24 | 122.42 (14) |
C5—C6—C7 | 117.34 (14) | C25—C26—H26 | 120.2 |
C7—C6—H6 | 121.3 | C25—C26—C27 | 119.68 (14) |
C6—C7—Br1 | 118.08 (12) | C27—C26—H26 | 120.2 |
C6—C7—C8 | 121.94 (15) | C26—C27—H27 | 120.4 |
C8—C7—Br1 | 119.97 (12) | C26—C27—C28 | 119.21 (14) |
C7—C8—H8 | 120.3 | C28—C27—H27 | 120.4 |
C7—C8—C9 | 119.48 (14) | C23—C28—C29 | 110.20 (12) |
C9—C8—H8 | 120.3 | C27—C28—C23 | 119.68 (14) |
C8—C9—H9 | 120.2 | C27—C28—C29 | 130.11 (13) |
C10—C9—C8 | 119.57 (14) | C28—C29—H29A | 111.1 |
C10—C9—H9 | 120.2 | C28—C29—H29B | 111.1 |
C5—C10—C9 | 119.10 (14) | C28—C29—C30 | 103.23 (11) |
C5—C10—C11 | 109.99 (13) | H29A—C29—H29B | 109.1 |
C9—C10—C11 | 130.91 (14) | C30—C29—H29A | 111.1 |
C10—C11—H11A | 111.0 | C30—C29—H29B | 111.1 |
C10—C11—H11B | 111.0 | C29—C30—C22 | 101.61 (11) |
C10—C11—C12 | 103.59 (11) | C31—C30—C22 | 112.81 (11) |
H11A—C11—H11B | 109.0 | C31—C30—C29 | 113.80 (12) |
C12—C11—H11A | 111.0 | C31—C30—C35 | 109.08 (12) |
C12—C11—H11B | 111.0 | C35—C30—C22 | 109.10 (11) |
C11—C12—C4 | 101.86 (11) | C35—C30—C29 | 110.20 (11) |
C13—C12—C4 | 110.97 (12) | C30—C31—H31A | 109.3 |
C13—C12—C11 | 114.79 (12) | C30—C31—H31B | 109.3 |
C13—C12—C17 | 109.50 (12) | C30—C31—C32 | 111.72 (12) |
C17—C12—C4 | 109.15 (11) | H31A—C31—H31B | 107.9 |
C17—C12—C11 | 110.28 (12) | C32—C31—H31A | 109.3 |
C12—C13—H13A | 108.9 | C32—C31—H31B | 109.3 |
C12—C13—H13B | 108.9 | C31—C32—H32A | 109.3 |
H13A—C13—H13B | 107.7 | C31—C32—H32B | 109.3 |
C14—C13—C12 | 113.34 (12) | H32A—C32—H32B | 108.0 |
C14—C13—H13A | 108.9 | C33—C32—C31 | 111.61 (13) |
C14—C13—H13B | 108.9 | C33—C32—H32A | 109.3 |
C13—C14—H14A | 109.3 | C33—C32—H32B | 109.3 |
C13—C14—H14B | 109.3 | C32—C33—H33 | 109.0 |
H14A—C14—H14B | 107.9 | C34—C33—C32 | 111.30 (12) |
C15—C14—C13 | 111.74 (13) | C34—C33—H33 | 109.0 |
C15—C14—H14A | 109.3 | O2—C33—C32 | 112.32 (13) |
C15—C14—H14B | 109.3 | O2—C33—H33 | 109.0 |
C14—C15—H15 | 109.0 | O2—C33—C34 | 106.11 (13) |
C14—C15—C16 | 109.82 (13) | C33—C34—H34A | 109.5 |
C16—C15—H15 | 109.0 | C33—C34—H34B | 109.5 |
O1—C15—C14 | 106.87 (13) | C33—C34—C35 | 110.78 (13) |
O1—C15—H15 | 109.0 | H34A—C34—H34B | 108.1 |
O1—C15—C16 | 113.19 (13) | C35—C34—H34A | 109.5 |
C15—C16—H16A | 109.7 | C35—C34—H34B | 109.5 |
C15—C16—H16B | 109.7 | C30—C35—H35A | 109.1 |
C15—C16—C17 | 109.84 (12) | C30—C35—H35B | 109.1 |
H16A—C16—H16B | 108.2 | C34—C35—C30 | 112.68 (12) |
C17—C16—H16A | 109.7 | C34—C35—H35A | 109.1 |
C17—C16—H16B | 109.7 | C34—C35—H35B | 109.1 |
C12—C17—H17A | 109.0 | H35A—C35—H35B | 107.8 |
C12—C17—H17B | 109.0 | H36A—C36—H36B | 109.5 |
C16—C17—C12 | 112.81 (12) | H36A—C36—H36C | 109.5 |
C16—C17—H17A | 109.0 | H36B—C36—H36C | 109.5 |
C16—C17—H17B | 109.0 | O2—C36—H36A | 109.5 |
H17A—C17—H17B | 107.8 | O2—C36—H36B | 109.5 |
H18A—C18—H18B | 109.5 | O2—C36—H36C | 109.5 |
H18A—C18—H18C | 109.5 | C1—N1—C19 | 114.92 (12) |
H18B—C18—H18C | 109.5 | C1—N2—C4 | 110.02 (12) |
O1—C18—H18A | 109.5 | C1—N2—H2 | 119.8 (12) |
O1—C18—H18B | 109.5 | C4—N2—H2 | 130.1 (12) |
O1—C18—H18C | 109.5 | C2—N3—C4 | 107.61 (11) |
N1—C19—C20 | 123.54 (12) | C19—N4—C22 | 107.66 (11) |
N4—C19—C20 | 108.12 (12) | C20—N5—C22 | 106.51 (11) |
N4—C19—N1 | 128.29 (13) | C18—O1—C15 | 113.31 (14) |
C21—C20—C19 | 123.79 (12) | C36—O2—C33 | 113.60 (15) |
N5—C20—C19 | 110.78 (12) | | |
| | | |
Br1—C7—C8—C9 | 178.42 (11) | C24—C23—C28—C29 | 178.36 (13) |
Br2—C25—C26—C27 | 179.54 (12) | C24—C25—C26—C27 | −0.7 (2) |
C1—C2—N3—C4 | 1.52 (16) | C25—C26—C27—C28 | 0.2 (2) |
C2—C1—N1—C19 | −174.58 (13) | C26—C27—C28—C23 | 0.4 (2) |
C2—C1—N2—C4 | 1.35 (16) | C26—C27—C28—C29 | −178.16 (15) |
C3—C2—N3—C4 | −177.80 (14) | C27—C28—C29—C30 | 157.17 (15) |
C4—C5—C6—C7 | −177.07 (13) | C28—C23—C24—C25 | −0.1 (2) |
C4—C5—C10—C9 | 176.23 (13) | C28—C29—C30—C22 | 33.89 (13) |
C4—C5—C10—C11 | −3.85 (16) | C28—C29—C30—C31 | 155.44 (12) |
C4—C12—C13—C14 | −171.17 (13) | C28—C29—C30—C35 | −81.68 (14) |
C4—C12—C17—C16 | 174.63 (12) | C29—C30—C31—C32 | 68.08 (16) |
C5—C4—C12—C11 | −33.48 (13) | C29—C30—C35—C34 | −69.81 (15) |
C5—C4—C12—C13 | −156.11 (12) | C30—C22—C23—C24 | −156.70 (14) |
C5—C4—C12—C17 | 83.12 (13) | C30—C22—C23—C28 | 22.73 (14) |
C5—C4—N2—C1 | 119.89 (13) | C30—C22—N4—C19 | −120.81 (13) |
C5—C4—N3—C2 | −124.03 (13) | C30—C22—N5—C20 | 123.30 (12) |
C5—C6—C7—Br1 | −179.74 (10) | C30—C31—C32—C33 | 56.31 (17) |
C5—C6—C7—C8 | 0.6 (2) | C31—C30—C35—C34 | 55.79 (16) |
C5—C10—C11—C12 | −18.25 (16) | C31—C32—C33—C34 | −55.19 (17) |
C6—C5—C10—C9 | −2.8 (2) | C31—C32—C33—O2 | −174.01 (12) |
C6—C5—C10—C11 | 177.14 (13) | C32—C33—C34—C35 | 54.55 (17) |
C6—C7—C8—C9 | −2.0 (2) | C32—C33—O2—C36 | −74.54 (18) |
C7—C8—C9—C10 | 0.9 (2) | C33—C34—C35—C30 | −55.86 (16) |
C8—C9—C10—C5 | 1.4 (2) | C34—C33—O2—C36 | 163.64 (15) |
C8—C9—C10—C11 | −178.53 (15) | C35—C30—C31—C32 | −55.40 (16) |
C9—C10—C11—C12 | 161.66 (15) | N1—C1—C2—C3 | −4.1 (2) |
C10—C5—C6—C7 | 1.8 (2) | N1—C1—C2—N3 | 176.53 (14) |
C10—C11—C12—C4 | 31.57 (14) | N1—C1—N2—C4 | −176.97 (14) |
C10—C11—C12—C13 | 151.55 (12) | N1—C19—C20—C21 | 4.0 (2) |
C10—C11—C12—C17 | −84.21 (14) | N1—C19—C20—N5 | −175.33 (13) |
C11—C12—C13—C14 | 74.04 (17) | N1—C19—N4—C22 | 175.04 (14) |
C11—C12—C17—C16 | −74.26 (15) | N2—C1—C2—C3 | 177.46 (14) |
C12—C4—C5—C6 | −157.02 (14) | N2—C1—C2—N3 | −1.88 (17) |
C12—C4—C5—C10 | 24.03 (15) | N2—C1—N1—C19 | 3.4 (2) |
C12—C4—N2—C1 | −122.41 (13) | N2—C4—C5—C6 | −32.6 (2) |
C12—C4—N3—C2 | 123.55 (13) | N2—C4—C5—C10 | 148.42 (12) |
C12—C13—C14—C15 | 54.37 (18) | N2—C4—C12—C11 | −157.73 (12) |
C13—C12—C17—C16 | 52.97 (16) | N2—C4—C12—C13 | 79.64 (15) |
C13—C14—C15—C16 | −57.49 (18) | N2—C4—C12—C17 | −41.12 (16) |
C13—C14—C15—O1 | 179.37 (13) | N2—C4—N3—C2 | −0.68 (15) |
C14—C15—C16—C17 | 59.04 (17) | N3—C4—C5—C6 | 85.21 (17) |
C14—C15—O1—C18 | −176.19 (14) | N3—C4—C5—C10 | −93.74 (14) |
C15—C16—C17—C12 | −58.08 (17) | N3—C4—C12—C11 | 83.52 (13) |
C16—C15—O1—C18 | 62.79 (19) | N3—C4—C12—C13 | −39.11 (16) |
C17—C12—C13—C14 | −50.61 (17) | N3—C4—C12—C17 | −159.88 (11) |
C19—C20—N5—C22 | −0.97 (15) | N3—C4—N2—C1 | −0.52 (15) |
C20—C19—N1—C1 | 171.64 (13) | N4—C19—C20—C21 | −178.47 (13) |
C20—C19—N4—C22 | −2.37 (15) | N4—C19—C20—N5 | 2.22 (17) |
C21—C20—N5—C22 | 179.73 (13) | N4—C19—N1—C1 | −5.4 (2) |
C22—C23—C24—C25 | 179.31 (13) | N4—C22—C23—C24 | −34.6 (2) |
C22—C23—C28—C27 | −179.95 (13) | N4—C22—C23—C28 | 144.88 (12) |
C22—C23—C28—C29 | −1.11 (16) | N4—C22—C30—C29 | −157.12 (11) |
C22—C30—C31—C32 | −176.82 (11) | N4—C22—C30—C31 | 80.65 (15) |
C22—C30—C35—C34 | 179.43 (12) | N4—C22—C30—C35 | −40.75 (15) |
C23—C22—C30—C29 | −34.24 (13) | N4—C22—N5—C20 | −0.44 (15) |
C23—C22—C30—C31 | −156.47 (11) | N5—C22—C23—C24 | 85.28 (17) |
C23—C22—C30—C35 | 82.13 (13) | N5—C22—C23—C28 | −95.29 (14) |
C23—C22—N4—C19 | 123.27 (13) | N5—C22—C30—C29 | 82.70 (13) |
C23—C22—N5—C20 | −124.56 (13) | N5—C22—C30—C31 | −39.53 (15) |
C23—C24—C25—Br2 | −179.61 (10) | N5—C22—C30—C35 | −160.93 (11) |
C23—C24—C25—C26 | 0.7 (2) | N5—C22—N4—C19 | 1.84 (15) |
C23—C28—C29—C30 | −21.51 (15) | O1—C15—C16—C17 | 178.38 (13) |
C24—C23—C28—C27 | −0.5 (2) | O2—C33—C34—C35 | 177.03 (12) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2···N4 | 0.82 (1) | 1.95 (2) | 2.5549 (16) | 129 (2) |
Bond lengths (Å) in the N-bridged bis-imidazole core for structures
1 and 2, with bonds denoted as in Fig. 4 topBond | Structure 1 | Bond order | Structure 2 | Bond order |
1 (N1···C1) | 1.3327 (19) | delocalized | 1.3081 (18) | delocalized |
2 (N1···C19) | 1.3616 (18) | delocalized | 1.3853 (18) | delocalized |
3 (C1···N2) | 1.3250 (19) | delocalized | 1.3374 (18) | delocalized |
4 (C19···N4) | 1.3115 (18) | delocalized | 1.2983 (18) | delocalized |
5 (C1—C2) | 1.4940 (19) | single | 1.4959 (19) | single |
6 (C19—C20) | 1.4925 (19) | single | 1.4940 (18) | single |
7 (N2—C4) | 1.4471 (18) | single | 1.4509 (17) | single |
8 (N4—C22) | 1.4513 (17) | single | 1.4791 (17) | single |
9 (C2—N3) | 1.2818 (19) | double | 1.2800 (19) | double |
10 (N5—C20) | 1.2809 (19) | double | 1.2837 (18) | double |
11 (N3—C4) | 1.4770 (17) | single | 1.4759 (18) | single |
12 (N5—C22) | 1.4816 (17) | single | 1.4635 (17) | single |