Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810003442/dn2532sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810003442/dn2532Isup2.hkl |
CCDC reference: 770087
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.003 Å
- R factor = 0.059
- wR factor = 0.154
- Data-to-parameter ratio = 17.2
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT230_ALERT_2_C Hirshfeld Test Diff for C10 -- C13 .. 5.00 su PLAT371_ALERT_2_C Long C(sp2)-C(sp1) Bond C10 - C13 ... 1.45 Ang. PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 2 PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 1 PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ ? PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 7
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 6 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The commercial isonicotinonitrile and benzoic acid (1/1 mol rate) were dissolved in water/methanol (5:3 v/v) solution. The solvent was slowly evaporated in air affording colourless block-shaped crystals of the title compound suitable for X-ray analysis.
While the permittivity measurement shows that there is no phase transition within the temperature range (from 100 K to 400 K), and the permittivity is 5.9 at 1 MHz at room temperature.
All H atoms attached to C atoms were positioned geometrically and treated as riding, with C—H = 0.93 Å and Uiso(H) = 1.2Ueq(C) and the H atoms of carboxyl O located in difference Fourier maps and freely refined. In the last stage of refinement they were treated as riding on the O atom, with Uĩso(H) = 1.5Ueq(O).
Data collection: CrystalClear (Rigaku, 2005); cell refinement: CrystalClear (Rigaku, 2005); data reduction: CrystalClear (Rigaku, 2005); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
C6H4N2·C7H6O2 | Z = 2 |
Mr = 226.23 | F(000) = 236 |
Triclinic, P1 | Dx = 1.296 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.4274 (15) Å | Cell parameters from 1346 reflections |
b = 7.7389 (15) Å | θ = 3.2–27.5° |
c = 11.668 (2) Å | µ = 0.09 mm−1 |
α = 85.26 (3)° | T = 298 K |
β = 76.44 (3)° | Block, colourless |
γ = 62.79 (2)° | 0.4 × 0.35 × 0.2 mm |
V = 579.6 (2) Å3 |
Rigaku Mercury2 diffractometer | 2646 independent reflections |
Radiation source: fine-focus sealed tube | 1346 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.042 |
Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5°, θmin = 3.2° |
ω scans | h = −9→9 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | k = −10→10 |
Tmin = 0.881, Tmax = 0.940 | l = −15→15 |
6025 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.059 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.154 | H-atom parameters constrained |
S = 0.96 | w = 1/[σ2(Fo2) + (0.0699P)2] where P = (Fo2 + 2Fc2)/3 |
2646 reflections | (Δ/σ)max < 0.001 |
154 parameters | Δρmax = 0.14 e Å−3 |
0 restraints | Δρmin = −0.18 e Å−3 |
C6H4N2·C7H6O2 | γ = 62.79 (2)° |
Mr = 226.23 | V = 579.6 (2) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.4274 (15) Å | Mo Kα radiation |
b = 7.7389 (15) Å | µ = 0.09 mm−1 |
c = 11.668 (2) Å | T = 298 K |
α = 85.26 (3)° | 0.4 × 0.35 × 0.2 mm |
β = 76.44 (3)° |
Rigaku Mercury2 diffractometer | 2646 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005) | 1346 reflections with I > 2σ(I) |
Tmin = 0.881, Tmax = 0.940 | Rint = 0.042 |
6025 measured reflections |
R[F2 > 2σ(F2)] = 0.059 | 0 restraints |
wR(F2) = 0.154 | H-atom parameters constrained |
S = 0.96 | Δρmax = 0.14 e Å−3 |
2646 reflections | Δρmin = −0.18 e Å−3 |
154 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3710 (2) | 0.8106 (2) | 0.47118 (13) | 0.0701 (5) | |
H1 | 0.4865 | 0.8033 | 0.4202 | 0.105* | |
O2 | 0.5897 (2) | 0.6595 (2) | 0.58797 (14) | 0.0824 (5) | |
N1 | 0.7138 (3) | 0.8082 (2) | 0.32068 (15) | 0.0578 (5) | |
C1 | 0.2396 (3) | 0.7201 (3) | 0.65759 (17) | 0.0491 (5) | |
C7 | 0.4176 (3) | 0.7263 (3) | 0.56976 (18) | 0.0529 (5) | |
C9 | 1.0739 (3) | 0.7156 (3) | 0.29472 (19) | 0.0615 (6) | |
H9 | 1.1922 | 0.6611 | 0.3257 | 0.074* | |
C6 | 0.0455 (3) | 0.7920 (3) | 0.63365 (19) | 0.0595 (6) | |
H6 | 0.0224 | 0.8473 | 0.5614 | 0.071* | |
C11 | 0.9010 (3) | 0.8656 (3) | 0.13992 (18) | 0.0584 (6) | |
H11 | 0.9012 | 0.9140 | 0.0643 | 0.070* | |
C8 | 0.8875 (3) | 0.7304 (3) | 0.35995 (18) | 0.0610 (6) | |
H8 | 0.8827 | 0.6831 | 0.4359 | 0.073* | |
C10 | 1.0797 (3) | 0.7841 (3) | 0.18209 (18) | 0.0503 (5) | |
C2 | 0.2716 (3) | 0.6398 (3) | 0.76576 (18) | 0.0616 (6) | |
H2 | 0.4022 | 0.5920 | 0.7825 | 0.074* | |
C12 | 0.7228 (3) | 0.8737 (3) | 0.21192 (19) | 0.0612 (6) | |
H12 | 0.6022 | 0.9278 | 0.1832 | 0.073* | |
C13 | 1.2710 (3) | 0.7712 (3) | 0.1076 (2) | 0.0642 (6) | |
C5 | −0.1155 (4) | 0.7817 (3) | 0.7179 (2) | 0.0717 (7) | |
H5 | −0.2463 | 0.8285 | 0.7015 | 0.086* | |
N2 | 1.4213 (3) | 0.7615 (3) | 0.04740 (19) | 0.0934 (8) | |
C4 | −0.0823 (4) | 0.7023 (3) | 0.8254 (2) | 0.0762 (7) | |
H4 | −0.1913 | 0.6979 | 0.8821 | 0.091* | |
C3 | 0.1099 (4) | 0.6302 (3) | 0.8492 (2) | 0.0719 (7) | |
H3 | 0.1325 | 0.5747 | 0.9215 | 0.086* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0597 (9) | 0.0992 (12) | 0.0555 (10) | −0.0427 (9) | −0.0132 (7) | 0.0230 (8) |
O2 | 0.0527 (10) | 0.1130 (13) | 0.0769 (12) | −0.0362 (9) | −0.0181 (8) | 0.0305 (10) |
N1 | 0.0573 (11) | 0.0652 (11) | 0.0517 (11) | −0.0313 (9) | −0.0058 (9) | 0.0008 (9) |
C1 | 0.0536 (13) | 0.0467 (12) | 0.0467 (12) | −0.0242 (10) | −0.0075 (10) | 0.0021 (9) |
C7 | 0.0512 (13) | 0.0548 (13) | 0.0512 (13) | −0.0243 (11) | −0.0099 (10) | 0.0070 (10) |
C9 | 0.0539 (13) | 0.0739 (15) | 0.0575 (14) | −0.0289 (11) | −0.0175 (10) | 0.0124 (11) |
C6 | 0.0581 (14) | 0.0697 (14) | 0.0572 (14) | −0.0346 (12) | −0.0131 (11) | 0.0046 (11) |
C11 | 0.0569 (13) | 0.0664 (14) | 0.0519 (13) | −0.0292 (11) | −0.0132 (11) | 0.0130 (11) |
C8 | 0.0659 (15) | 0.0683 (14) | 0.0488 (13) | −0.0324 (12) | −0.0110 (11) | 0.0088 (11) |
C10 | 0.0488 (12) | 0.0512 (12) | 0.0515 (12) | −0.0253 (10) | −0.0071 (9) | 0.0027 (9) |
C2 | 0.0623 (14) | 0.0644 (14) | 0.0547 (14) | −0.0273 (11) | −0.0117 (11) | 0.0074 (11) |
C12 | 0.0519 (12) | 0.0753 (15) | 0.0570 (14) | −0.0292 (11) | −0.0147 (10) | 0.0096 (11) |
C13 | 0.0540 (14) | 0.0720 (15) | 0.0629 (15) | −0.0271 (12) | −0.0123 (12) | 0.0101 (11) |
C5 | 0.0562 (14) | 0.0832 (17) | 0.0800 (18) | −0.0386 (13) | −0.0056 (13) | −0.0037 (13) |
N2 | 0.0625 (13) | 0.126 (2) | 0.0867 (17) | −0.0462 (14) | −0.0044 (12) | 0.0156 (14) |
C4 | 0.0825 (18) | 0.0744 (16) | 0.0691 (17) | −0.0466 (15) | 0.0151 (14) | −0.0085 (13) |
C3 | 0.0852 (18) | 0.0718 (16) | 0.0497 (14) | −0.0353 (14) | −0.0008 (13) | 0.0068 (11) |
O1—C7 | 1.313 (2) | C11—C10 | 1.376 (3) |
O1—H1 | 0.9025 | C11—H11 | 0.9300 |
O2—C7 | 1.205 (2) | C8—H8 | 0.9300 |
N1—C12 | 1.325 (3) | C10—C13 | 1.446 (3) |
N1—C8 | 1.326 (3) | C2—C3 | 1.384 (3) |
C1—C6 | 1.377 (3) | C2—H2 | 0.9300 |
C1—C2 | 1.383 (3) | C12—H12 | 0.9300 |
C1—C7 | 1.488 (3) | C13—N2 | 1.144 (3) |
C9—C8 | 1.373 (3) | C5—C4 | 1.375 (3) |
C9—C10 | 1.375 (3) | C5—H5 | 0.9300 |
C9—H9 | 0.9300 | C4—C3 | 1.363 (3) |
C6—C5 | 1.388 (3) | C4—H4 | 0.9300 |
C6—H6 | 0.9300 | C3—H3 | 0.9300 |
C11—C12 | 1.368 (3) | ||
C7—O1—H1 | 110.0 | C9—C10—C11 | 119.40 (19) |
C12—N1—C8 | 117.62 (18) | C9—C10—C13 | 120.88 (19) |
C6—C1—C2 | 119.62 (19) | C11—C10—C13 | 119.72 (19) |
C6—C1—C7 | 121.69 (18) | C1—C2—C3 | 120.2 (2) |
C2—C1—C7 | 118.69 (18) | C1—C2—H2 | 119.9 |
O2—C7—O1 | 123.03 (18) | C3—C2—H2 | 119.9 |
O2—C7—C1 | 122.61 (18) | N1—C12—C11 | 123.1 (2) |
O1—C7—C1 | 114.36 (18) | N1—C12—H12 | 118.4 |
C8—C9—C10 | 117.7 (2) | C11—C12—H12 | 118.4 |
C8—C9—H9 | 121.2 | N2—C13—C10 | 179.1 (3) |
C10—C9—H9 | 121.2 | C4—C5—C6 | 120.2 (2) |
C1—C6—C5 | 119.7 (2) | C4—C5—H5 | 119.9 |
C1—C6—H6 | 120.2 | C6—C5—H5 | 119.9 |
C5—C6—H6 | 120.2 | C3—C4—C5 | 120.2 (2) |
C12—C11—C10 | 118.44 (19) | C3—C4—H4 | 119.9 |
C12—C11—H11 | 120.8 | C5—C4—H4 | 119.9 |
C10—C11—H11 | 120.8 | C4—C3—C2 | 120.0 (2) |
N1—C8—C9 | 123.7 (2) | C4—C3—H3 | 120.0 |
N1—C8—H8 | 118.2 | C2—C3—H3 | 120.0 |
C9—C8—H8 | 118.2 |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.90 | 1.83 | 2.726 (2) | 176 |
C8—H8···O2 | 0.93 | 2.53 | 3.222 (3) | 131 |
Experimental details
Crystal data | |
Chemical formula | C6H4N2·C7H6O2 |
Mr | 226.23 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 7.4274 (15), 7.7389 (15), 11.668 (2) |
α, β, γ (°) | 85.26 (3), 76.44 (3), 62.79 (2) |
V (Å3) | 579.6 (2) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.4 × 0.35 × 0.2 |
Data collection | |
Diffractometer | Rigaku Mercury2 diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2005) |
Tmin, Tmax | 0.881, 0.940 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6025, 2646, 1346 |
Rint | 0.042 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.059, 0.154, 0.96 |
No. of reflections | 2646 |
No. of parameters | 154 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.14, −0.18 |
Computer programs: CrystalClear (Rigaku, 2005), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.90 | 1.83 | 2.726 (2) | 175.5 |
C8—H8···O2 | 0.93 | 2.53 | 3.222 (3) | 131.0 |
Cg1 is the centroid of C1–C6 and Cg2 is the centroid of N1–C12. |
Centroid–centroid | Plane–plane | Offset | |
Cg1—- Cg2i | 3.83 | 3.52 | 23.2 |
Cg1—-Cg2ii | 3.91 | 3.59 | 23.3 |
Symmetry codes: (i) 1-x, 1-y, 1-z; (ii) 1-x, 2-y, 1-z. |
Cocrystal attracted more and more attention in recent years for its wide range of applation, for example phase transition dielectric materials and pharmaceutical(Chen, et al. 2009; Fu, et al. 2008). With the purpose of obtaining cocrystals of isonicotinonitrile, its interaction with various acids has been studied and we have elaborated a serie of new materials with this organic molecule. In this paper, we describe the crystal structure of the title compound, isonicotinonitrile benzoate.
The asymmetric unit is composed of a discrete isonicotinonitrile and benzoic acid molecules (Fig.1). The carboxyl and its parent phenyl ring are essentially coplanar, and only twisted from each other by a dihedral angles of 2.05 (3)°. The two molecules are nearly planar and are only slightly twisted by a dihedral angle of 1.87 (7)° . The molecules were connected via O—H···N and C-H···O hydrogen bonds building a R22(7) ring (Etter et al., 1990; Bernstein et al., 1995) which play an important role in stabilizing the structural conformation. The molecules units are further linked by weak offset π···π interactions leading to a one-dimensional chain parallel to the b axis (Table 2 and Fig. 2).