In the title compound, C
17H
18N
4O
2, the dihedral angle between the pyridine and benzene rings is 55.68 (11)°. In the crystal, N—H
N hydrogen bonds link the molecules into [010] chains.
Supporting information
CCDC reference: 1911469
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.003 Å
- R factor = 0.048
- wR factor = 0.133
- Data-to-parameter ratio = 13.1
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of N4 Check
PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of C15 Check
PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.595 25 Report
PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 21 Note
Alert level G
PLAT909_ALERT_3_G Percentage of I>2sig(I) Data at Theta(Max) Still 71% Note
PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 3 Note
PLAT933_ALERT_2_G Number of OMIT Records in Embedded .res File ... 1 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 4 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
4 ALERT level C = Check. Ensure it is not caused by an omission or oversight
4 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
4 ALERT type 2 Indicator that the structure model may be wrong or deficient
4 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: APEX3 (Bruker, 2016); cell refinement: APEX3 and SAINT (Bruker, 2016); data reduction: SAINT and XPREP (Bruker, 2016); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018 (Sheldrick, 2015b); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and Mercury (Macrae et al.,
2008); software used to prepare material for publication: SHELXL2018 (Sheldrick, 2015b).
N-(
tert-Butyl)-2-(2-nitrophenyl)imidazo[1,2-
a]pyridin-3-amine
top
Crystal data top
C17H18N4O2 | F(000) = 656 |
Mr = 310.35 | Dx = 1.298 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
a = 8.046 (7) Å | Cell parameters from 9919 reflections |
b = 11.038 (10) Å | θ = 2.9–30.5° |
c = 17.912 (15) Å | µ = 0.09 mm−1 |
β = 93.47 (3)° | T = 296 K |
V = 1588 (2) Å3 | Block, brown |
Z = 4 | 0.30 × 0.25 × 0.20 mm |
Data collection top
Bruker Kappa APEX2 CMOS diffractometer | 2770 independent reflections |
Radiation source: fine-focus sealed tube | 2430 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
ω and φ scan | θmax = 25.0°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Bruker, 2016) | h = −9→9 |
Tmin = 0.678, Tmax = 0.746 | k = −13→13 |
27960 measured reflections | l = −21→20 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.048 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.133 | w = 1/[σ2(Fo2) + (0.061P)2 + 0.9086P] where P = (Fo2 + 2Fc2)/3 |
S = 1.06 | (Δ/σ)max < 0.001 |
2770 reflections | Δρmax = 0.20 e Å−3 |
212 parameters | Δρmin = −0.20 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C1 | 0.30330 (19) | 0.23121 (15) | 0.15414 (9) | 0.0301 (4) | |
C2 | 0.2519 (2) | 0.17506 (17) | 0.08591 (10) | 0.0379 (4) | |
H2 | 0.274952 | 0.093657 | 0.078025 | 0.045* | |
C3 | 0.1687 (3) | 0.24088 (19) | 0.03207 (10) | 0.0459 (5) | |
H3 | 0.133177 | 0.204120 | −0.012811 | 0.055* | |
C4 | 0.1353 (3) | 0.36484 (19) | 0.04332 (11) | 0.0486 (5) | |
H4 | 0.077691 | 0.408864 | 0.005807 | 0.058* | |
C5 | 0.1860 (2) | 0.42014 (17) | 0.10783 (10) | 0.0394 (4) | |
H5 | 0.164764 | 0.502022 | 0.114921 | 0.047* | |
C6 | 0.33523 (19) | 0.38898 (14) | 0.23310 (9) | 0.0279 (4) | |
C7 | 0.40432 (19) | 0.28449 (15) | 0.26309 (9) | 0.0299 (4) | |
C8 | 0.4982 (2) | 0.26944 (15) | 0.33571 (9) | 0.0326 (4) | |
C9 | 0.4610 (2) | 0.18049 (16) | 0.38715 (10) | 0.0387 (4) | |
C10 | 0.5537 (3) | 0.16271 (18) | 0.45377 (11) | 0.0493 (5) | |
H10 | 0.524721 | 0.102488 | 0.486886 | 0.059* | |
C11 | 0.6900 (3) | 0.2359 (2) | 0.47024 (12) | 0.0534 (6) | |
H11 | 0.753904 | 0.225574 | 0.514800 | 0.064* | |
C12 | 0.7309 (3) | 0.3245 (2) | 0.42035 (13) | 0.0535 (5) | |
H12 | 0.823182 | 0.373485 | 0.431392 | 0.064* | |
C13 | 0.6367 (2) | 0.34146 (18) | 0.35419 (11) | 0.0425 (4) | |
H13 | 0.666250 | 0.402001 | 0.321398 | 0.051* | |
C15 | 0.1893 (2) | 0.54261 (15) | 0.30802 (10) | 0.0355 (4) | |
C16 | 0.1656 (3) | 0.67880 (18) | 0.30153 (14) | 0.0581 (6) | |
H16A | 0.083002 | 0.704460 | 0.334670 | 0.087* | |
H16B | 0.269065 | 0.718842 | 0.314819 | 0.087* | |
H16C | 0.129591 | 0.699179 | 0.251009 | 0.087* | |
C17 | 0.2453 (3) | 0.5097 (2) | 0.38823 (12) | 0.0607 (6) | |
H17A | 0.160266 | 0.532130 | 0.420949 | 0.091* | |
H17B | 0.264531 | 0.423958 | 0.391680 | 0.091* | |
H17C | 0.346312 | 0.552144 | 0.402593 | 0.091* | |
C18 | 0.0280 (3) | 0.4774 (2) | 0.28534 (15) | 0.0605 (6) | |
H18A | −0.055408 | 0.498849 | 0.319132 | 0.091* | |
H18B | −0.008882 | 0.500645 | 0.235408 | 0.091* | |
H18C | 0.046138 | 0.391461 | 0.287147 | 0.091* | |
N1 | 0.26936 (16) | 0.35359 (12) | 0.16279 (7) | 0.0289 (3) | |
N2 | 0.38504 (17) | 0.18709 (13) | 0.21493 (8) | 0.0334 (3) | |
N3 | 0.31833 (18) | 0.50905 (12) | 0.25542 (8) | 0.0315 (3) | |
N4 | 0.3144 (2) | 0.10426 (16) | 0.37388 (10) | 0.0530 (5) | |
O1 | 0.3307 (3) | −0.00446 (17) | 0.38458 (14) | 0.1032 (8) | |
O2 | 0.1814 (2) | 0.15316 (18) | 0.35684 (9) | 0.0685 (5) | |
H3A | 0.410 (3) | 0.544 (2) | 0.2658 (12) | 0.045 (6)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C1 | 0.0304 (8) | 0.0275 (8) | 0.0324 (9) | 0.0014 (6) | 0.0033 (6) | −0.0013 (7) |
C2 | 0.0429 (10) | 0.0343 (9) | 0.0364 (9) | 0.0015 (7) | 0.0011 (8) | −0.0052 (7) |
C3 | 0.0528 (11) | 0.0516 (12) | 0.0324 (9) | 0.0022 (9) | −0.0032 (8) | −0.0083 (8) |
C4 | 0.0586 (12) | 0.0519 (12) | 0.0340 (10) | 0.0139 (10) | −0.0082 (8) | 0.0040 (8) |
C5 | 0.0485 (10) | 0.0346 (9) | 0.0346 (9) | 0.0094 (8) | −0.0014 (8) | 0.0040 (7) |
C6 | 0.0286 (8) | 0.0269 (8) | 0.0281 (8) | −0.0014 (6) | 0.0018 (6) | 0.0008 (6) |
C7 | 0.0291 (8) | 0.0295 (9) | 0.0308 (8) | −0.0001 (6) | 0.0006 (6) | 0.0002 (6) |
C8 | 0.0344 (8) | 0.0287 (8) | 0.0341 (9) | 0.0065 (7) | −0.0019 (7) | −0.0011 (7) |
C9 | 0.0457 (10) | 0.0325 (9) | 0.0371 (9) | 0.0030 (8) | −0.0037 (8) | 0.0005 (7) |
C10 | 0.0678 (13) | 0.0388 (10) | 0.0398 (10) | 0.0066 (9) | −0.0090 (9) | 0.0062 (8) |
C11 | 0.0628 (13) | 0.0491 (12) | 0.0454 (11) | 0.0098 (10) | −0.0210 (10) | −0.0016 (9) |
C12 | 0.0480 (11) | 0.0521 (12) | 0.0577 (13) | −0.0014 (9) | −0.0179 (10) | −0.0033 (10) |
C13 | 0.0407 (10) | 0.0409 (10) | 0.0448 (11) | −0.0020 (8) | −0.0051 (8) | 0.0026 (8) |
C15 | 0.0380 (9) | 0.0287 (9) | 0.0405 (10) | 0.0012 (7) | 0.0089 (7) | −0.0022 (7) |
C16 | 0.0647 (14) | 0.0332 (11) | 0.0792 (16) | 0.0088 (9) | 0.0255 (12) | −0.0001 (10) |
C17 | 0.0765 (16) | 0.0661 (15) | 0.0409 (11) | 0.0157 (12) | 0.0149 (11) | −0.0004 (10) |
C18 | 0.0394 (11) | 0.0638 (14) | 0.0799 (16) | −0.0092 (10) | 0.0179 (11) | −0.0181 (12) |
N1 | 0.0311 (7) | 0.0266 (7) | 0.0290 (7) | 0.0024 (5) | 0.0013 (5) | 0.0015 (5) |
N2 | 0.0369 (8) | 0.0288 (7) | 0.0342 (8) | 0.0045 (6) | −0.0004 (6) | −0.0007 (6) |
N3 | 0.0318 (8) | 0.0258 (7) | 0.0372 (8) | −0.0029 (6) | 0.0040 (6) | −0.0021 (6) |
N4 | 0.0664 (12) | 0.0468 (11) | 0.0445 (10) | −0.0142 (9) | −0.0074 (8) | 0.0111 (8) |
O1 | 0.1304 (19) | 0.0502 (11) | 0.1245 (19) | −0.0298 (11) | −0.0298 (15) | 0.0251 (11) |
O2 | 0.0582 (10) | 0.0850 (13) | 0.0613 (10) | −0.0176 (9) | −0.0049 (8) | 0.0064 (9) |
Geometric parameters (Å, º) top
C1—N2 | 1.330 (2) | C11—C12 | 1.378 (3) |
C1—N1 | 1.389 (2) | C11—H11 | 0.9300 |
C1—C2 | 1.410 (3) | C12—C13 | 1.380 (3) |
C2—C3 | 1.352 (3) | C12—H12 | 0.9300 |
C2—H2 | 0.9300 | C13—H13 | 0.9300 |
C3—C4 | 1.411 (3) | C15—N3 | 1.490 (2) |
C3—H3 | 0.9300 | C15—C18 | 1.518 (3) |
C4—C5 | 1.348 (3) | C15—C16 | 1.519 (3) |
C4—H4 | 0.9300 | C15—C17 | 1.523 (3) |
C5—N1 | 1.371 (2) | C16—H16A | 0.9600 |
C5—H5 | 0.9300 | C16—H16B | 0.9600 |
C6—C7 | 1.375 (2) | C16—H16C | 0.9600 |
C6—N1 | 1.392 (2) | C17—H17A | 0.9600 |
C6—N3 | 1.393 (2) | C17—H17B | 0.9600 |
C7—N2 | 1.381 (2) | C17—H17C | 0.9600 |
C7—C8 | 1.473 (2) | C18—H18A | 0.9600 |
C8—C9 | 1.391 (3) | C18—H18B | 0.9600 |
C8—C13 | 1.392 (3) | C18—H18C | 0.9600 |
C9—C10 | 1.382 (3) | N3—H3A | 0.85 (2) |
C9—N4 | 1.457 (3) | N4—O2 | 1.221 (3) |
C10—C11 | 1.380 (3) | N4—O1 | 1.221 (3) |
C10—H10 | 0.9300 | | |
| | | |
N2—C1—N1 | 110.84 (14) | C12—C13—H13 | 119.4 |
N2—C1—C2 | 130.80 (16) | C8—C13—H13 | 119.4 |
N1—C1—C2 | 118.36 (15) | N3—C15—C18 | 109.28 (16) |
C3—C2—C1 | 119.26 (18) | N3—C15—C16 | 106.68 (15) |
C3—C2—H2 | 120.4 | C18—C15—C16 | 110.31 (18) |
C1—C2—H2 | 120.4 | N3—C15—C17 | 111.07 (16) |
C2—C3—C4 | 120.63 (18) | C18—C15—C17 | 109.77 (18) |
C2—C3—H3 | 119.7 | C16—C15—C17 | 109.69 (18) |
C4—C3—H3 | 119.7 | C15—C16—H16A | 109.5 |
C5—C4—C3 | 120.74 (17) | C15—C16—H16B | 109.5 |
C5—C4—H4 | 119.6 | H16A—C16—H16B | 109.5 |
C3—C4—H4 | 119.6 | C15—C16—H16C | 109.5 |
C4—C5—N1 | 118.85 (18) | H16A—C16—H16C | 109.5 |
C4—C5—H5 | 120.6 | H16B—C16—H16C | 109.5 |
N1—C5—H5 | 120.6 | C15—C17—H17A | 109.5 |
C7—C6—N1 | 103.93 (14) | C15—C17—H17B | 109.5 |
C7—C6—N3 | 136.86 (16) | H17A—C17—H17B | 109.5 |
N1—C6—N3 | 119.21 (14) | C15—C17—H17C | 109.5 |
C6—C7—N2 | 112.41 (15) | H17A—C17—H17C | 109.5 |
C6—C7—C8 | 127.80 (15) | H17B—C17—H17C | 109.5 |
N2—C7—C8 | 119.72 (15) | C15—C18—H18A | 109.5 |
C9—C8—C13 | 116.53 (16) | C15—C18—H18B | 109.5 |
C9—C8—C7 | 123.01 (16) | H18A—C18—H18B | 109.5 |
C13—C8—C7 | 120.37 (16) | C15—C18—H18C | 109.5 |
C10—C9—C8 | 123.05 (18) | H18A—C18—H18C | 109.5 |
C10—C9—N4 | 116.62 (17) | H18B—C18—H18C | 109.5 |
C8—C9—N4 | 120.27 (16) | C5—N1—C1 | 122.15 (15) |
C11—C10—C9 | 118.80 (19) | C5—N1—C6 | 129.96 (15) |
C11—C10—H10 | 120.6 | C1—N1—C6 | 107.89 (13) |
C9—C10—H10 | 120.6 | C1—N2—C7 | 104.93 (14) |
C12—C11—C10 | 119.67 (18) | C6—N3—C15 | 120.11 (14) |
C12—C11—H11 | 120.2 | C6—N3—H3A | 113.4 (15) |
C10—C11—H11 | 120.2 | C15—N3—H3A | 112.5 (15) |
C11—C12—C13 | 120.8 (2) | O2—N4—O1 | 123.9 (2) |
C11—C12—H12 | 119.6 | O2—N4—C9 | 118.32 (18) |
C13—C12—H12 | 119.6 | O1—N4—C9 | 117.6 (2) |
C12—C13—C8 | 121.11 (19) | | |
| | | |
N2—C1—C2—C3 | 179.80 (18) | C4—C5—N1—C1 | 0.0 (3) |
N1—C1—C2—C3 | −1.4 (2) | C4—C5—N1—C6 | 179.30 (17) |
C1—C2—C3—C4 | 0.8 (3) | N2—C1—N1—C5 | −179.99 (15) |
C2—C3—C4—C5 | 0.2 (3) | C2—C1—N1—C5 | 1.0 (2) |
C3—C4—C5—N1 | −0.6 (3) | N2—C1—N1—C6 | 0.59 (18) |
N1—C6—C7—N2 | 0.24 (18) | C2—C1—N1—C6 | −178.43 (14) |
N3—C6—C7—N2 | −179.97 (17) | C7—C6—N1—C5 | −179.84 (16) |
N1—C6—C7—C8 | 177.11 (15) | N3—C6—N1—C5 | 0.3 (2) |
N3—C6—C7—C8 | −3.1 (3) | C7—C6—N1—C1 | −0.49 (16) |
C6—C7—C8—C9 | 129.2 (2) | N3—C6—N1—C1 | 179.68 (14) |
N2—C7—C8—C9 | −54.2 (2) | N1—C1—N2—C7 | −0.43 (17) |
C6—C7—C8—C13 | −54.4 (3) | C2—C1—N2—C7 | 178.44 (17) |
N2—C7—C8—C13 | 122.28 (19) | C6—C7—N2—C1 | 0.11 (18) |
C13—C8—C9—C10 | 0.4 (3) | C8—C7—N2—C1 | −177.04 (14) |
C7—C8—C9—C10 | 176.93 (17) | C7—C6—N3—C15 | −77.9 (3) |
C13—C8—C9—N4 | 177.47 (17) | N1—C6—N3—C15 | 101.86 (18) |
C7—C8—C9—N4 | −5.9 (3) | C18—C15—N3—C6 | −43.1 (2) |
C8—C9—C10—C11 | −0.3 (3) | C16—C15—N3—C6 | −162.30 (17) |
N4—C9—C10—C11 | −177.48 (19) | C17—C15—N3—C6 | 78.2 (2) |
C9—C10—C11—C12 | −0.1 (3) | C10—C9—N4—O2 | 128.0 (2) |
C10—C11—C12—C13 | 0.4 (3) | C8—C9—N4—O2 | −49.3 (3) |
C11—C12—C13—C8 | −0.3 (3) | C10—C9—N4—O1 | −48.0 (3) |
C9—C8—C13—C12 | −0.1 (3) | C8—C9—N4—O1 | 134.7 (2) |
C7—C8—C13—C12 | −176.75 (18) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3A···N2i | 0.85 (2) | 2.29 (2) | 3.112 (3) | 164 (2) |
Symmetry code: (i) −x+1, y+1/2, −z+1/2. |