




Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810042078/fj2353sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536810042078/fj2353Isup2.hkl |
CCDC reference: 608669
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean
(C-C) = 0.004 Å
- R factor = 0.052
- wR factor = 0.157
- Data-to-parameter ratio = 12.2
checkCIF/PLATON results
No syntax errors found
Alert level C SHFSU01_ALERT_2_C Test not performed. _refine_ls_shift/su_max and _refine_ls_shift/esd_max not present. Absolute value of the parameter shift to su ratio given 0.001 PLAT230_ALERT_2_C Hirshfeld Test Diff for O2 -- C18 .. 5.71 su
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 29.00 From the CIF: _reflns_number_total 2691 Count of symmetry unique reflns 2692 Completeness (_total/calc) 99.96% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no PLAT960_ALERT_3_G Number of Intensities with I .LT. - 2*sig(I) .. 3 PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 2 PLAT791_ALERT_4_G Note: The Model has Chirality at C5 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C8 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C9 (Verify) R PLAT791_ALERT_4_G Note: The Model has Chirality at C10 (Verify) R PLAT791_ALERT_4_G Note: The Model has Chirality at C13 (Verify) S
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 8 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 7 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The air-dried and crushed stem barks of C. tagal (4.8 kg) were extracted with methylene chloride and then concentrated in vacuo to give a residue (17.4 g). This residue was subjected to quick column chromatography over silica gel using solvents of increasing polarity from hexane through 50% acetone/hexane. The eluates were collected and combined, based on TLC, to give 20 fractions (F1—F20). Fraction F14 was further purified by repeated quick column chromatography with CH2Cl2/acetone (9:1 v/v) yielding title compound (30.4 mg). Colorless block-shaped single crystals of the title compound suitable for x-ray structure determination were recrystallized from hexane/CH2Cl2 (1:1, v/v) after several days, Mp. 395–396 K.
All H atoms were placed in calculated positions with d(O—H) = 0.82 Å and d(C—H) = 0.93 Å for aromatic and CH, 0.97 for CH2 and 0.96 Å for CH3 atoms. The Uiso values were constrained to be 1.5Ueq of the carrier atom for hydroxy and methyl H atoms and 1.2Ueq for the remaining H atoms. A rotating group model was used for the methyl groups. The highest residual electron density peak is located at 0.18 Å from H1B and the deepest hole is located at 0.50 Å from O2. A total of 2024 Friedel pairs were merged before final refinement as there is no large anomalous dispersion for the determination of the absolute configuration.
Ceriops tagal (Perr.) C. B. Robinson is a mangrove plant belonging to the Rhizophoraceae family. Diterpenoids and triterpenoids are the main secondary metabolites of C. tagal (Chantrapromma et al., 2007; Hu et al., 2010; Zhang et al., 2005). During the course of our studies on the chemical constituents and bioactive compounds from Thai medicinal plants, the title dolabrane diterpenoid compound (I), which is known as Tagalsin S (Hu et al., 2010), was isolated from the the stem barks of C. tagal. We have also previously reported the crystal structures of two diterpenoid compounds isolated from the same plant (Chantrapromma et al., 2007; Fun et al., 2006). We herein report the crystal structure of (I).
The molecule of the title compound contains a fused three-ring system A/B/C (Fig. 1). The A/B ring junction is cis-fused and B/C is trans-fused. The cyclohexane ring A adopts half-chair conformation with puckering parameters Q = 0.539 (3) Å, θ = 111.0 (3)° and φ = 92.5 (4)°, rings B and C are in standard chair conformations (Cremer & Pople 1975). The hydroxylmethylidine substituent is planarly attached to cyclohexane ring A at atom C4 as indicated by the torsion angle C3—C4—C18—O2 of 4.4 (5)° and the bond angles around atom C4 are indicative of sp2 hybridization for this atom. The orientations of the carbonyl and alcohol substituent groups at atom C13 are described by the torsion angles C13–C15—C16—O4 = 166.3 (3)° and O3–C15–C16–O4 = -11.1 (5)°. Intramolecular O2—H1O2···O1 hydrogen bond (Table 1) generates S(6) ring motif (Fig. 1) (Bernstein et al., 1995). The bond distances are of normal values (Allen et al., 1987) and are comparable with the related structures (Chantrapromma et al., 2007; Fun et al., 2006).
In the crystal structure (Fig. 2), the molecules are arranged into screw chains along the [0 0 1] direction and the adjacent chains are further linked by weak C—H···O interactions (Table 1). The crystal packing of (I) is stabilized by intermolecular O—H···O hydrogen bonds and weak C—H···O interactions (Fig. 2 and Table 1).
For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For ring conformations, see: Cremer & Pople (1975). For background to diterpenoids, see, for example: Hu et al. (2010); Zhang et al. (2005). For related structures, see: Chantrapromma et al. (2007); Fun et al. (2006). For the stability of the temperature controller used in the data collection, see Cosier & Glazer, (1986).
Data collection: APEX2 (Bruker, 2005); cell refinement: SAINT (Bruker, 2005); data reduction: SAINT (Bruker, 2005); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
C20H30O4 | Dx = 1.249 Mg m−3 |
Mr = 334.44 | Melting point = 495–496 K |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 2691 reflections |
a = 7.9633 (3) Å | θ = 2.0–29.0° |
b = 10.7166 (4) Å | µ = 0.09 mm−1 |
c = 20.8338 (7) Å | T = 100 K |
V = 1777.95 (11) Å3 | Plate, colourless |
Z = 4 | 0.58 × 0.51 × 0.10 mm |
F(000) = 728 |
Bruker APEXII CCD area-detector diffractometer | 2691 independent reflections |
Radiation source: sealed tube | 2084 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
φ and ω scans | θmax = 29.0°, θmin = 2.0° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −10→10 |
Tmin = 0.952, Tmax = 0.992 | k = −14→10 |
20568 measured reflections | l = −24→28 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.052 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.157 | H-atom parameters constrained |
S = 1.09 | w = 1/[σ2(Fo2) + (0.077P)2 + 0.7994P] where P = (Fo2 + 2Fc2)/3 |
2691 reflections | (Δ/σ)max < 0.001 |
220 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.45 e Å−3 |
C20H30O4 | V = 1777.95 (11) Å3 |
Mr = 334.44 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 7.9633 (3) Å | µ = 0.09 mm−1 |
b = 10.7166 (4) Å | T = 100 K |
c = 20.8338 (7) Å | 0.58 × 0.51 × 0.10 mm |
Bruker APEXII CCD area-detector diffractometer | 2691 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 2084 reflections with I > 2σ(I) |
Tmin = 0.952, Tmax = 0.992 | Rint = 0.030 |
20568 measured reflections |
R[F2 > 2σ(F2)] = 0.052 | 0 restraints |
wR(F2) = 0.157 | H-atom parameters constrained |
S = 1.09 | Δρmax = 0.31 e Å−3 |
2691 reflections | Δρmin = −0.45 e Å−3 |
220 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.9767 (3) | 0.4254 (2) | 0.05460 (11) | 0.0420 (6) | |
O2 | 1.2362 (4) | 0.3517 (3) | 0.10215 (15) | 0.0633 (8) | |
H1O2 | 1.1724 | 0.3988 | 0.0830 | 0.095* | |
O3 | 0.5983 (4) | 0.4271 (2) | 0.41250 (10) | 0.0413 (6) | |
O4 | 0.6697 (4) | 0.3378 (2) | 0.52946 (11) | 0.0552 (8) | |
H1O4 | 0.6102 | 0.4000 | 0.5273 | 0.083* | |
C1 | 0.6196 (4) | 0.2200 (3) | 0.09423 (15) | 0.0360 (8) | |
H1A | 0.5759 | 0.1550 | 0.0665 | 0.043* | |
H1B | 0.5242 | 0.2658 | 0.1110 | 0.043* | |
C2 | 0.7243 (4) | 0.3092 (3) | 0.05327 (15) | 0.0379 (8) | |
H2A | 0.7218 | 0.2792 | 0.0094 | 0.045* | |
H2B | 0.6696 | 0.3900 | 0.0537 | 0.045* | |
C3 | 0.9026 (4) | 0.3276 (3) | 0.07172 (13) | 0.0294 (7) | |
C4 | 0.9885 (3) | 0.2325 (3) | 0.10845 (12) | 0.0221 (5) | |
C5 | 0.8927 (4) | 0.1186 (3) | 0.13108 (13) | 0.0230 (6) | |
C6 | 0.9782 (4) | 0.0532 (3) | 0.18765 (13) | 0.0301 (7) | |
H6A | 0.9239 | −0.0267 | 0.1947 | 0.036* | |
H6B | 1.0944 | 0.0370 | 0.1765 | 0.036* | |
C7 | 0.9731 (4) | 0.1276 (3) | 0.24997 (14) | 0.0272 (6) | |
H7A | 1.0337 | 0.2054 | 0.2446 | 0.033* | |
H7B | 1.0269 | 0.0805 | 0.2840 | 0.033* | |
C8 | 0.7911 (4) | 0.1547 (2) | 0.26801 (13) | 0.0226 (6) | |
H8A | 0.7344 | 0.0737 | 0.2708 | 0.027* | |
C9 | 0.6987 (3) | 0.2298 (2) | 0.21580 (13) | 0.0200 (5) | |
C10 | 0.7108 (4) | 0.1569 (3) | 0.15117 (13) | 0.0241 (6) | |
H10A | 0.6510 | 0.0783 | 0.1585 | 0.029* | |
C11 | 0.5122 (4) | 0.2385 (3) | 0.23683 (14) | 0.0318 (7) | |
H11A | 0.4514 | 0.2889 | 0.2059 | 0.038* | |
H11B | 0.4636 | 0.1555 | 0.2363 | 0.038* | |
C12 | 0.4884 (4) | 0.2955 (3) | 0.30434 (14) | 0.0338 (7) | |
H12A | 0.5200 | 0.3828 | 0.3030 | 0.041* | |
H12B | 0.3705 | 0.2912 | 0.3157 | 0.041* | |
C13 | 0.5915 (4) | 0.2302 (3) | 0.35673 (14) | 0.0276 (6) | |
C14 | 0.7769 (4) | 0.2146 (2) | 0.33451 (13) | 0.0227 (6) | |
H14A | 0.8305 | 0.2958 | 0.3336 | 0.027* | |
H14B | 0.8364 | 0.1633 | 0.3654 | 0.027* | |
C15 | 0.6017 (4) | 0.3139 (3) | 0.41616 (14) | 0.0290 (6) | |
C16 | 0.6242 (5) | 0.2539 (3) | 0.48109 (14) | 0.0394 (8) | |
H16A | 0.5201 | 0.2133 | 0.4932 | 0.047* | |
H16B | 0.7100 | 0.1900 | 0.4778 | 0.047* | |
C17 | 0.5129 (5) | 0.1042 (3) | 0.37320 (18) | 0.0463 (9) | |
H17A | 0.4050 | 0.1172 | 0.3926 | 0.070* | |
H17B | 0.5844 | 0.0603 | 0.4026 | 0.070* | |
H17C | 0.4998 | 0.0559 | 0.3347 | 0.070* | |
C18 | 1.1538 (4) | 0.2500 (3) | 0.11951 (15) | 0.0342 (7) | |
H18A | 1.2130 | 0.1872 | 0.1404 | 0.041* | |
C19 | 0.8839 (5) | 0.0238 (3) | 0.07522 (15) | 0.0352 (7) | |
H19A | 0.9938 | −0.0099 | 0.0674 | 0.053* | |
H19B | 0.8441 | 0.0649 | 0.0372 | 0.053* | |
H19C | 0.8085 | −0.0427 | 0.0864 | 0.053* | |
C20 | 0.7677 (4) | 0.3630 (2) | 0.21044 (13) | 0.0236 (6) | |
H20A | 0.7370 | 0.4095 | 0.2480 | 0.035* | |
H20B | 0.7213 | 0.4026 | 0.1731 | 0.035* | |
H20C | 0.8878 | 0.3602 | 0.2068 | 0.035* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0564 (16) | 0.0328 (12) | 0.0369 (12) | 0.0036 (12) | 0.0098 (12) | 0.0126 (10) |
O2 | 0.0435 (16) | 0.0705 (19) | 0.076 (2) | −0.0151 (15) | 0.0071 (15) | 0.0049 (17) |
O3 | 0.0643 (16) | 0.0281 (11) | 0.0314 (11) | 0.0050 (12) | −0.0030 (12) | −0.0080 (10) |
O4 | 0.088 (2) | 0.0437 (14) | 0.0337 (12) | 0.0225 (15) | −0.0180 (13) | −0.0096 (11) |
C1 | 0.0222 (14) | 0.056 (2) | 0.0301 (15) | 0.0036 (14) | −0.0107 (12) | −0.0167 (15) |
C2 | 0.0410 (19) | 0.0438 (19) | 0.0290 (16) | 0.0139 (16) | −0.0147 (14) | −0.0040 (14) |
C3 | 0.0375 (16) | 0.0331 (16) | 0.0177 (13) | 0.0076 (14) | 0.0011 (12) | 0.0008 (12) |
C4 | 0.0231 (13) | 0.0252 (13) | 0.0180 (12) | 0.0007 (11) | −0.0014 (10) | −0.0005 (10) |
C5 | 0.0233 (13) | 0.0212 (13) | 0.0245 (13) | 0.0021 (11) | −0.0020 (11) | −0.0020 (10) |
C6 | 0.0374 (17) | 0.0228 (14) | 0.0303 (14) | 0.0123 (13) | 0.0022 (13) | 0.0022 (12) |
C7 | 0.0310 (15) | 0.0272 (14) | 0.0232 (12) | 0.0127 (13) | −0.0015 (12) | 0.0032 (11) |
C8 | 0.0289 (14) | 0.0133 (11) | 0.0254 (13) | 0.0001 (11) | 0.0041 (11) | 0.0011 (10) |
C9 | 0.0154 (11) | 0.0198 (12) | 0.0248 (13) | −0.0013 (10) | −0.0024 (10) | −0.0051 (11) |
C10 | 0.0212 (13) | 0.0241 (14) | 0.0269 (14) | −0.0030 (11) | −0.0016 (11) | −0.0068 (12) |
C11 | 0.0190 (13) | 0.0440 (18) | 0.0325 (16) | −0.0016 (13) | −0.0016 (11) | −0.0148 (14) |
C12 | 0.0187 (14) | 0.0483 (18) | 0.0345 (15) | 0.0004 (14) | 0.0012 (12) | −0.0138 (14) |
C13 | 0.0288 (14) | 0.0250 (14) | 0.0290 (14) | −0.0062 (13) | 0.0068 (12) | −0.0070 (12) |
C14 | 0.0293 (14) | 0.0145 (12) | 0.0242 (13) | 0.0027 (11) | 0.0002 (11) | 0.0009 (10) |
C15 | 0.0265 (14) | 0.0320 (15) | 0.0286 (15) | 0.0014 (13) | 0.0044 (12) | −0.0051 (12) |
C16 | 0.050 (2) | 0.0347 (17) | 0.0333 (18) | 0.0056 (17) | 0.0005 (15) | −0.0039 (15) |
C17 | 0.057 (2) | 0.0367 (18) | 0.0451 (19) | −0.0219 (17) | 0.0195 (18) | −0.0115 (15) |
C18 | 0.0254 (14) | 0.0401 (18) | 0.0372 (17) | −0.0031 (14) | −0.0048 (13) | 0.0034 (15) |
C19 | 0.0434 (19) | 0.0287 (15) | 0.0335 (16) | 0.0018 (15) | 0.0058 (15) | −0.0086 (13) |
C20 | 0.0285 (14) | 0.0170 (12) | 0.0253 (13) | 0.0036 (11) | −0.0081 (11) | −0.0002 (11) |
O1—C3 | 1.254 (4) | C9—C20 | 1.534 (4) |
O2—C18 | 1.323 (4) | C9—C11 | 1.551 (4) |
O2—H1O2 | 0.8200 | C9—C10 | 1.560 (4) |
O3—C15 | 1.216 (4) | C10—H10A | 0.9800 |
O4—C16 | 1.398 (4) | C11—C12 | 1.545 (4) |
O4—H1O4 | 0.8200 | C11—H11A | 0.9700 |
C1—C2 | 1.529 (5) | C11—H11B | 0.9700 |
C1—C10 | 1.547 (4) | C12—C13 | 1.535 (4) |
C1—H1A | 0.9700 | C12—H12A | 0.9700 |
C1—H1B | 0.9700 | C12—H12B | 0.9700 |
C2—C3 | 1.484 (5) | C13—C17 | 1.527 (4) |
C2—H2A | 0.9700 | C13—C15 | 1.531 (4) |
C2—H2B | 0.9700 | C13—C14 | 1.556 (4) |
C3—C4 | 1.446 (4) | C14—H14A | 0.9700 |
C4—C18 | 1.350 (4) | C14—H14B | 0.9700 |
C4—C5 | 1.515 (4) | C15—C16 | 1.508 (4) |
C5—C6 | 1.531 (4) | C16—H16A | 0.9700 |
C5—C19 | 1.547 (4) | C16—H16B | 0.9700 |
C5—C10 | 1.563 (4) | C17—H17A | 0.9600 |
C6—C7 | 1.525 (4) | C17—H17B | 0.9600 |
C6—H6A | 0.9700 | C17—H17C | 0.9600 |
C6—H6B | 0.9700 | C18—H18A | 0.9300 |
C7—C8 | 1.525 (4) | C19—H19A | 0.9600 |
C7—H7A | 0.9700 | C19—H19B | 0.9600 |
C7—H7B | 0.9700 | C19—H19C | 0.9600 |
C8—C14 | 1.531 (4) | C20—H20A | 0.9600 |
C8—C9 | 1.540 (4) | C20—H20B | 0.9600 |
C8—H8A | 0.9800 | C20—H20C | 0.9600 |
C18—O2—H1O2 | 109.5 | C5—C10—H10A | 105.5 |
C16—O4—H1O4 | 109.5 | C12—C11—C9 | 113.5 (2) |
C2—C1—C10 | 116.4 (3) | C12—C11—H11A | 108.9 |
C2—C1—H1A | 108.2 | C9—C11—H11A | 108.9 |
C10—C1—H1A | 108.2 | C12—C11—H11B | 108.9 |
C2—C1—H1B | 108.2 | C9—C11—H11B | 108.9 |
C10—C1—H1B | 108.2 | H11A—C11—H11B | 107.7 |
H1A—C1—H1B | 107.3 | C13—C12—C11 | 113.7 (3) |
C3—C2—C1 | 117.4 (3) | C13—C12—H12A | 108.8 |
C3—C2—H2A | 107.9 | C11—C12—H12A | 108.8 |
C1—C2—H2A | 107.9 | C13—C12—H12B | 108.8 |
C3—C2—H2B | 107.9 | C11—C12—H12B | 108.8 |
C1—C2—H2B | 107.9 | H12A—C12—H12B | 107.7 |
H2A—C2—H2B | 107.2 | C17—C13—C15 | 111.0 (2) |
O1—C3—C4 | 121.1 (3) | C17—C13—C12 | 110.1 (3) |
O1—C3—C2 | 119.2 (3) | C15—C13—C12 | 109.7 (2) |
C4—C3—C2 | 119.7 (3) | C17—C13—C14 | 111.2 (3) |
C18—C4—C3 | 117.0 (3) | C15—C13—C14 | 104.7 (2) |
C18—C4—C5 | 123.4 (3) | C12—C13—C14 | 110.2 (2) |
C3—C4—C5 | 119.6 (3) | C8—C14—C13 | 112.6 (2) |
C4—C5—C6 | 112.6 (2) | C8—C14—H14A | 109.1 |
C4—C5—C19 | 108.5 (2) | C13—C14—H14A | 109.1 |
C6—C5—C19 | 107.4 (2) | C8—C14—H14B | 109.1 |
C4—C5—C10 | 109.8 (2) | C13—C14—H14B | 109.1 |
C6—C5—C10 | 109.0 (2) | H14A—C14—H14B | 107.8 |
C19—C5—C10 | 109.4 (2) | O3—C15—C16 | 118.9 (3) |
C7—C6—C5 | 113.8 (2) | O3—C15—C13 | 122.2 (3) |
C7—C6—H6A | 108.8 | C16—C15—C13 | 118.8 (3) |
C5—C6—H6A | 108.8 | O4—C16—C15 | 113.8 (3) |
C7—C6—H6B | 108.8 | O4—C16—H16A | 108.8 |
C5—C6—H6B | 108.8 | C15—C16—H16A | 108.8 |
H6A—C6—H6B | 107.7 | O4—C16—H16B | 108.8 |
C6—C7—C8 | 109.5 (3) | C15—C16—H16B | 108.8 |
C6—C7—H7A | 109.8 | H16A—C16—H16B | 107.7 |
C8—C7—H7A | 109.8 | C13—C17—H17A | 109.5 |
C6—C7—H7B | 109.8 | C13—C17—H17B | 109.5 |
C8—C7—H7B | 109.8 | H17A—C17—H17B | 109.5 |
H7A—C7—H7B | 108.2 | C13—C17—H17C | 109.5 |
C7—C8—C14 | 111.9 (2) | H17A—C17—H17C | 109.5 |
C7—C8—C9 | 112.3 (2) | H17B—C17—H17C | 109.5 |
C14—C8—C9 | 112.6 (2) | O2—C18—C4 | 123.4 (3) |
C7—C8—H8A | 106.5 | O2—C18—H18A | 118.3 |
C14—C8—H8A | 106.5 | C4—C18—H18A | 118.3 |
C9—C8—H8A | 106.5 | C5—C19—H19A | 109.5 |
C20—C9—C8 | 111.5 (2) | C5—C19—H19B | 109.5 |
C20—C9—C11 | 107.9 (2) | H19A—C19—H19B | 109.5 |
C8—C9—C11 | 106.8 (2) | C5—C19—H19C | 109.5 |
C20—C9—C10 | 112.4 (2) | H19A—C19—H19C | 109.5 |
C8—C9—C10 | 108.6 (2) | H19B—C19—H19C | 109.5 |
C11—C9—C10 | 109.5 (2) | C9—C20—H20A | 109.5 |
C1—C10—C9 | 114.5 (2) | C9—C20—H20B | 109.5 |
C1—C10—C5 | 110.2 (2) | H20A—C20—H20B | 109.5 |
C9—C10—C5 | 114.9 (2) | C9—C20—H20C | 109.5 |
C1—C10—H10A | 105.5 | H20A—C20—H20C | 109.5 |
C9—C10—H10A | 105.5 | H20B—C20—H20C | 109.5 |
C10—C1—C2—C3 | −0.2 (4) | C8—C9—C10—C5 | −52.4 (3) |
C1—C2—C3—O1 | −157.0 (3) | C11—C9—C10—C5 | −168.7 (3) |
C1—C2—C3—C4 | 23.7 (4) | C4—C5—C10—C1 | 57.8 (3) |
O1—C3—C4—C18 | −4.4 (4) | C6—C5—C10—C1 | −178.4 (2) |
C2—C3—C4—C18 | 175.0 (3) | C19—C5—C10—C1 | −61.2 (3) |
O1—C3—C4—C5 | 177.0 (2) | C4—C5—C10—C9 | −73.3 (3) |
C2—C3—C4—C5 | −3.6 (4) | C6—C5—C10—C9 | 50.6 (3) |
C18—C4—C5—C6 | 22.3 (4) | C19—C5—C10—C9 | 167.7 (2) |
C3—C4—C5—C6 | −159.2 (2) | C20—C9—C11—C12 | −64.2 (3) |
C18—C4—C5—C19 | −96.4 (3) | C8—C9—C11—C12 | 55.8 (3) |
C3—C4—C5—C19 | 82.1 (3) | C10—C9—C11—C12 | 173.2 (3) |
C18—C4—C5—C10 | 144.0 (3) | C9—C11—C12—C13 | −53.6 (4) |
C3—C4—C5—C10 | −37.5 (3) | C11—C12—C13—C17 | −74.3 (3) |
C4—C5—C6—C7 | 69.2 (3) | C11—C12—C13—C15 | 163.3 (3) |
C19—C5—C6—C7 | −171.3 (3) | C11—C12—C13—C14 | 48.6 (3) |
C10—C5—C6—C7 | −52.9 (3) | C7—C8—C14—C13 | −174.0 (2) |
C5—C6—C7—C8 | 58.1 (3) | C9—C8—C14—C13 | 58.3 (3) |
C6—C7—C8—C14 | 172.7 (2) | C17—C13—C14—C8 | 71.3 (3) |
C6—C7—C8—C9 | −59.5 (3) | C15—C13—C14—C8 | −168.8 (2) |
C7—C8—C9—C20 | −68.1 (3) | C12—C13—C14—C8 | −51.0 (3) |
C14—C8—C9—C20 | 59.3 (3) | C17—C13—C15—O3 | −151.8 (4) |
C7—C8—C9—C11 | 174.2 (2) | C12—C13—C15—O3 | −30.0 (4) |
C14—C8—C9—C11 | −58.4 (3) | C14—C13—C15—O3 | 88.2 (4) |
C7—C8—C9—C10 | 56.2 (3) | C17—C13—C15—C16 | 31.0 (4) |
C14—C8—C9—C10 | −176.4 (2) | C12—C13—C15—C16 | 152.8 (3) |
C2—C1—C10—C9 | 91.3 (3) | C14—C13—C15—C16 | −89.0 (3) |
C2—C1—C10—C5 | −40.0 (3) | O3—C15—C16—O4 | −11.1 (5) |
C20—C9—C10—C1 | −57.5 (3) | C13—C15—C16—O4 | 166.3 (3) |
C8—C9—C10—C1 | 178.7 (2) | C3—C4—C18—O2 | 4.4 (5) |
C11—C9—C10—C1 | 62.4 (3) | C5—C4—C18—O2 | −177.1 (3) |
C20—C9—C10—C5 | 71.4 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1 | 0.82 | 1.69 | 2.424 (4) | 148 |
O4—H1O4···O1i | 0.82 | 2.07 | 2.841 (3) | 156 |
C1—H1B···O2ii | 0.97 | 2.48 | 3.368 (5) | 152 |
C12—H12A···O3 | 0.97 | 2.41 | 2.799 (4) | 103 |
C17—H17A···O4iii | 0.96 | 2.53 | 3.460 (5) | 164 |
Symmetry codes: (i) −x+3/2, −y+1, z+1/2; (ii) x−1, y, z; (iii) x−1/2, −y+1/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C20H30O4 |
Mr | 334.44 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 100 |
a, b, c (Å) | 7.9633 (3), 10.7166 (4), 20.8338 (7) |
V (Å3) | 1777.95 (11) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.58 × 0.51 × 0.10 |
Data collection | |
Diffractometer | Bruker APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.952, 0.992 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20568, 2691, 2084 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.682 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.052, 0.157, 1.09 |
No. of reflections | 2691 |
No. of parameters | 220 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.31, −0.45 |
Computer programs: APEX2 (Bruker, 2005), SAINT (Bruker, 2005), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O2—H1O2···O1 | 0.82 | 1.69 | 2.424 (4) | 148 |
O4—H1O4···O1i | 0.82 | 2.07 | 2.841 (3) | 156 |
C1—H1B···O2ii | 0.97 | 2.48 | 3.368 (5) | 152 |
C12—H12A···O3 | 0.97 | 2.41 | 2.799 (4) | 103 |
C17—H17A···O4iii | 0.96 | 2.53 | 3.460 (5) | 164 |
Symmetry codes: (i) −x+3/2, −y+1, z+1/2; (ii) x−1, y, z; (iii) x−1/2, −y+1/2, −z+1. |
Ceriops tagal (Perr.) C. B. Robinson is a mangrove plant belonging to the Rhizophoraceae family. Diterpenoids and triterpenoids are the main secondary metabolites of C. tagal (Chantrapromma et al., 2007; Hu et al., 2010; Zhang et al., 2005). During the course of our studies on the chemical constituents and bioactive compounds from Thai medicinal plants, the title dolabrane diterpenoid compound (I), which is known as Tagalsin S (Hu et al., 2010), was isolated from the the stem barks of C. tagal. We have also previously reported the crystal structures of two diterpenoid compounds isolated from the same plant (Chantrapromma et al., 2007; Fun et al., 2006). We herein report the crystal structure of (I).
The molecule of the title compound contains a fused three-ring system A/B/C (Fig. 1). The A/B ring junction is cis-fused and B/C is trans-fused. The cyclohexane ring A adopts half-chair conformation with puckering parameters Q = 0.539 (3) Å, θ = 111.0 (3)° and φ = 92.5 (4)°, rings B and C are in standard chair conformations (Cremer & Pople 1975). The hydroxylmethylidine substituent is planarly attached to cyclohexane ring A at atom C4 as indicated by the torsion angle C3—C4—C18—O2 of 4.4 (5)° and the bond angles around atom C4 are indicative of sp2 hybridization for this atom. The orientations of the carbonyl and alcohol substituent groups at atom C13 are described by the torsion angles C13–C15—C16—O4 = 166.3 (3)° and O3–C15–C16–O4 = -11.1 (5)°. Intramolecular O2—H1O2···O1 hydrogen bond (Table 1) generates S(6) ring motif (Fig. 1) (Bernstein et al., 1995). The bond distances are of normal values (Allen et al., 1987) and are comparable with the related structures (Chantrapromma et al., 2007; Fun et al., 2006).
In the crystal structure (Fig. 2), the molecules are arranged into screw chains along the [0 0 1] direction and the adjacent chains are further linked by weak C—H···O interactions (Table 1). The crystal packing of (I) is stabilized by intermolecular O—H···O hydrogen bonds and weak C—H···O interactions (Fig. 2 and Table 1).