Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810046052/fl2325sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810046052/fl2325Isup2.hkl |
CCDC reference: 803176
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.035
- wR factor = 0.088
- Data-to-parameter ratio = 15.3
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 2
Alert level G PLAT431_ALERT_2_G Short Inter HL..A Contact Cl1 .. Cl1 .. 3.39 Ang. PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature 293 K
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 3 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The title compound was synthesized from 1-hydroxymethylbenzotriazole and thionyl chloride as described in the literature with a yield of 78% (Burckhalter et al., 1952). To 12 g of 1-hydroxymethylbenzotriazole kept at ice-bath temperature, 40 ml of thionyl chloride was added dropwise. The mixture was then stirred and refluxed for 90 minutes. Excess thionyl chloride was removed by distillation, last traces by heating for 15 minutes with 50 ml of methanol. After cooling and collecting on a funnel, the product was then recrystallized from benzene. Crystal suitable for X-ray diffraction analysis was obtained by crystallization from methanol.
H atoms were included in calculated positions and refined as riding atoms with fixed C—H distances [C—H = 0.97Å for CH2, and 0.93Å for aromatic CH] and Uiso(H) assigned to 1.2Ueq(C) of their bonding carbon atom.
Benzotriazole derivatives exhibit a good degree of anti-inflammatory, diuretic and antihypertensive activities (Jiao et al., 2005). The title compound (common name: 1-(chloromethyl)-benzotriazole), as one of the derivatives of benzotriazole, has been synthesized (Burckhalter et al., 1952)and used to synthesize 1-(mercaptomethyl)benzotriazole and other derivates(Katritzky et al. 1996). Now, we report herein the crystal structure of the benzotriazole derivative, (I).
The asymmetric unit of (I) comprises of one molecule of the compound (Fig. 1). The bond lengths and angles are found to have normal values (Alkorta et al, 2004; Wang et al., 2008). The benzotriazole ring is essentially planar with the maximum deviation form planarity being 0.0110 (15)Å for atom N1. The dihedral angle formed by the ring 1 (N1/N2/N3/C6/C1) and the ring 2 (C1/C2/C3/C4/C5/C6) is 0.46 (8)°. In the chloromethyl group, the C—Cl and C—N bond lengths are 1.7951 (18)Å and 1.424 (2) Å, respectively (Fig. 1). There is a C—H···N intermolecular interaction (Table 1, Fig. 2) stabilizing the observed molecular conformation, and the structure is further stalilized by pi···pi contacts involving both of the aromatic rings (Cg(1)—C(g)2 = 3.7003 (14) Å, which Cg(1) is the centroid of the ring 1 and Cg(2) is the centroid of the ring 2).
For bond-length data, see: Alkorta et al. (2004); Wang et al. (2008). For applications of 1-(chloromethyl)benzotriazole, see: Katritzky et al. (1996). For the preparation of the title compound, see: Burckhalter et al. (1952). For the biological activity of benzotriazole derivatives, see: Jiao et al. (2005).
Data collection: CrysAlis CCD (Oxford Diffraction, 2010); cell refinement: CrysAlis RED (Oxford Diffraction, 2010); data reduction: CrysAlis RED (Oxford Diffraction, 2010); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
C7H6ClN3 | F(000) = 344 |
Mr = 167.60 | Dx = 1.482 Mg m−3 |
Monoclinic, P21/c | Melting point: 409.5 K |
Hall symbol: -P 2ybc | Mo Kα radiation, λ = 0.7107 Å |
a = 7.5081 (17) Å | Cell parameters from 1327 reflections |
b = 9.6045 (14) Å | θ = 3.6–26.4° |
c = 10.984 (2) Å | µ = 0.44 mm−1 |
β = 108.49 (2)° | T = 293 K |
V = 751.2 (3) Å3 | Block, colourless |
Z = 4 | 0.21 × 0.20 × 0.19 mm |
Oxford Diffraction Xcalibur Eos Gemini diffractometer | 1218 reflections with I > 2σ(I) |
Radiation source: Enhance (Mo) X-ray Source | Rint = 0.016 |
Graphite monochromator | θmax = 26.4°, θmin = 3.6° |
ω scans | h = −9→8 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | k = −12→9 |
Tmin = 0.914, Tmax = 0.922 | l = −8→13 |
2865 measured reflections | 2865 standard reflections every 0 min |
1530 independent reflections | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.088 | H-atom parameters constrained |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0381P)2 + 0.0967P] where P = (Fo2 + 2Fc2)/3 |
1530 reflections | (Δ/σ)max < 0.001 |
100 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.16 e Å−3 |
C7H6ClN3 | V = 751.2 (3) Å3 |
Mr = 167.60 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.5081 (17) Å | µ = 0.44 mm−1 |
b = 9.6045 (14) Å | T = 293 K |
c = 10.984 (2) Å | 0.21 × 0.20 × 0.19 mm |
β = 108.49 (2)° |
Oxford Diffraction Xcalibur Eos Gemini diffractometer | 1218 reflections with I > 2σ(I) |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | Rint = 0.016 |
Tmin = 0.914, Tmax = 0.922 | 2865 standard reflections every 0 min |
2865 measured reflections | intensity decay: none |
1530 independent reflections |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.088 | H-atom parameters constrained |
S = 1.06 | Δρmax = 0.23 e Å−3 |
1530 reflections | Δρmin = −0.16 e Å−3 |
100 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.28373 (7) | 0.06214 (5) | 0.48763 (5) | 0.0569 (2) | |
N1 | 0.12629 (19) | 0.31134 (15) | 0.42214 (12) | 0.0387 (3) | |
C6 | 0.2688 (2) | 0.44038 (19) | 0.63087 (16) | 0.0411 (4) | |
H6A | 0.2580 | 0.3716 | 0.6877 | 0.049* | |
N2 | 0.0960 (2) | 0.34462 (18) | 0.29614 (13) | 0.0509 (4) | |
C7 | 0.0840 (2) | 0.17530 (18) | 0.45677 (18) | 0.0436 (4) | |
H7A | −0.0195 | 0.1369 | 0.3878 | 0.052* | |
H7B | 0.0453 | 0.1810 | 0.5329 | 0.052* | |
N3 | 0.1527 (2) | 0.47155 (18) | 0.29024 (14) | 0.0534 (4) | |
C2 | 0.2235 (2) | 0.52323 (19) | 0.41342 (16) | 0.0403 (4) | |
C1 | 0.2084 (2) | 0.42052 (17) | 0.49813 (15) | 0.0332 (4) | |
C4 | 0.3611 (3) | 0.6730 (2) | 0.5873 (2) | 0.0557 (5) | |
H4A | 0.4140 | 0.7581 | 0.6204 | 0.067* | |
C3 | 0.3011 (3) | 0.6533 (2) | 0.4584 (2) | 0.0514 (5) | |
H3B | 0.3111 | 0.7231 | 0.4023 | 0.062* | |
C5 | 0.3451 (3) | 0.5681 (2) | 0.67153 (19) | 0.0504 (5) | |
H5A | 0.3884 | 0.5860 | 0.7592 | 0.061* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.0606 (3) | 0.0432 (3) | 0.0670 (4) | 0.0114 (2) | 0.0204 (3) | 0.0072 (2) |
N1 | 0.0447 (8) | 0.0379 (8) | 0.0319 (7) | 0.0053 (6) | 0.0098 (6) | 0.0008 (6) |
C6 | 0.0460 (10) | 0.0417 (10) | 0.0365 (9) | 0.0045 (8) | 0.0142 (8) | 0.0023 (8) |
N2 | 0.0602 (10) | 0.0574 (11) | 0.0318 (8) | 0.0121 (8) | 0.0099 (7) | 0.0023 (7) |
C7 | 0.0432 (10) | 0.0380 (10) | 0.0489 (10) | 0.0000 (8) | 0.0135 (8) | −0.0045 (8) |
N3 | 0.0648 (11) | 0.0583 (11) | 0.0393 (8) | 0.0149 (9) | 0.0198 (8) | 0.0126 (8) |
C2 | 0.0421 (10) | 0.0433 (10) | 0.0390 (9) | 0.0114 (8) | 0.0178 (8) | 0.0094 (8) |
C1 | 0.0325 (8) | 0.0337 (9) | 0.0348 (9) | 0.0063 (7) | 0.0125 (7) | 0.0021 (7) |
C4 | 0.0531 (12) | 0.0403 (11) | 0.0729 (13) | −0.0051 (9) | 0.0188 (10) | −0.0092 (11) |
C3 | 0.0534 (12) | 0.0393 (11) | 0.0682 (13) | 0.0027 (9) | 0.0286 (10) | 0.0137 (10) |
C5 | 0.0539 (11) | 0.0513 (12) | 0.0432 (10) | 0.0019 (9) | 0.0114 (9) | −0.0100 (9) |
Cl1—C7 | 1.7950 (18) | C7—H7B | 0.9700 |
N1—C1 | 1.360 (2) | N3—C2 | 1.380 (2) |
N1—N2 | 1.3674 (19) | C2—C1 | 1.385 (2) |
N1—C7 | 1.424 (2) | C2—C3 | 1.401 (3) |
C6—C5 | 1.367 (3) | C4—C3 | 1.356 (3) |
C6—C1 | 1.396 (2) | C4—C5 | 1.399 (3) |
C6—H6A | 0.9300 | C4—H4A | 0.9300 |
N2—N3 | 1.299 (2) | C3—H3B | 0.9300 |
C7—H7A | 0.9700 | C5—H5A | 0.9300 |
C1—N1—N2 | 109.78 (14) | N3—C2—C3 | 130.89 (17) |
C1—N1—C7 | 129.74 (13) | C1—C2—C3 | 120.79 (16) |
N2—N1—C7 | 120.34 (14) | N1—C1—C2 | 104.75 (14) |
C5—C6—C1 | 115.31 (17) | N1—C1—C6 | 132.87 (15) |
C5—C6—H6A | 122.3 | C2—C1—C6 | 122.38 (16) |
C1—C6—H6A | 122.3 | C3—C4—C5 | 121.34 (18) |
N3—N2—N1 | 108.53 (14) | C3—C4—H4A | 119.3 |
N1—C7—Cl1 | 111.25 (12) | C5—C4—H4A | 119.3 |
N1—C7—H7A | 109.4 | C4—C3—C2 | 117.14 (17) |
Cl1—C7—H7A | 109.4 | C4—C3—H3B | 121.4 |
N1—C7—H7B | 109.4 | C2—C3—H3B | 121.4 |
Cl1—C7—H7B | 109.4 | C6—C5—C4 | 123.04 (18) |
H7A—C7—H7B | 108.0 | C6—C5—H5A | 118.5 |
N2—N3—C2 | 108.61 (14) | C4—C5—H5A | 118.5 |
N3—C2—C1 | 108.32 (16) | ||
C1—N1—N2—N3 | −1.26 (19) | N3—C2—C1—N1 | −0.84 (18) |
C7—N1—N2—N3 | −177.32 (15) | C3—C2—C1—N1 | 179.33 (15) |
C1—N1—C7—Cl1 | −84.43 (19) | N3—C2—C1—C6 | 179.77 (15) |
N2—N1—C7—Cl1 | 90.74 (16) | C3—C2—C1—C6 | −0.1 (3) |
N1—N2—N3—C2 | 0.7 (2) | C5—C6—C1—N1 | −179.59 (17) |
N2—N3—C2—C1 | 0.1 (2) | C5—C6—C1—C2 | −0.4 (2) |
N2—N3—C2—C3 | 179.91 (18) | C5—C4—C3—C2 | −0.3 (3) |
N2—N1—C1—C2 | 1.27 (18) | N3—C2—C3—C4 | −179.37 (18) |
C7—N1—C1—C2 | 176.84 (16) | C1—C2—C3—C4 | 0.4 (3) |
N2—N1—C1—C6 | −179.43 (17) | C1—C6—C5—C4 | 0.5 (3) |
C7—N1—C1—C6 | −3.9 (3) | C3—C4—C5—C6 | −0.2 (3) |
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···N3i | 0.97 | 2.47 | 3.360 (2) | 152 |
Symmetry code: (i) −x, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C7H6ClN3 |
Mr | 167.60 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 7.5081 (17), 9.6045 (14), 10.984 (2) |
β (°) | 108.49 (2) |
V (Å3) | 751.2 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.44 |
Crystal size (mm) | 0.21 × 0.20 × 0.19 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur Eos Gemini |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2004) |
Tmin, Tmax | 0.914, 0.922 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 2865, 1530, 1218 |
Rint | 0.016 |
(sin θ/λ)max (Å−1) | 0.625 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.088, 1.06 |
No. of reflections | 1530 |
No. of parameters | 100 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.23, −0.16 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2010), CrysAlis RED (Oxford Diffraction, 2010), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C7—H7A···N3i | 0.97 | 2.47 | 3.360 (2) | 152.3 |
Symmetry code: (i) −x, y−1/2, −z+1/2. |
Benzotriazole derivatives exhibit a good degree of anti-inflammatory, diuretic and antihypertensive activities (Jiao et al., 2005). The title compound (common name: 1-(chloromethyl)-benzotriazole), as one of the derivatives of benzotriazole, has been synthesized (Burckhalter et al., 1952)and used to synthesize 1-(mercaptomethyl)benzotriazole and other derivates(Katritzky et al. 1996). Now, we report herein the crystal structure of the benzotriazole derivative, (I).
The asymmetric unit of (I) comprises of one molecule of the compound (Fig. 1). The bond lengths and angles are found to have normal values (Alkorta et al, 2004; Wang et al., 2008). The benzotriazole ring is essentially planar with the maximum deviation form planarity being 0.0110 (15)Å for atom N1. The dihedral angle formed by the ring 1 (N1/N2/N3/C6/C1) and the ring 2 (C1/C2/C3/C4/C5/C6) is 0.46 (8)°. In the chloromethyl group, the C—Cl and C—N bond lengths are 1.7951 (18)Å and 1.424 (2) Å, respectively (Fig. 1). There is a C—H···N intermolecular interaction (Table 1, Fig. 2) stabilizing the observed molecular conformation, and the structure is further stalilized by pi···pi contacts involving both of the aromatic rings (Cg(1)—C(g)2 = 3.7003 (14) Å, which Cg(1) is the centroid of the ring 1 and Cg(2) is the centroid of the ring 2).