The title compound, [N(CH2CH2NH3)3]Br3, is a salt of a triprotonated tetramine. The tertiary amine N atom sits on a threefold axis, as do the three bromide anions. Each of the primary amines is protonated, while the tertiary amine is not protonated. The compound is isostructural with the chloride and the perchlorate analogs.
Supporting information
CCDC reference: 226935
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.007 Å
- R factor = 0.063
- wR factor = 0.145
- Data-to-parameter ratio = 33.4
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT035_ALERT_1_A No _chemical_absolute_configuration info given . ?
| Author Response: ...see _publ_section_exptl_refinement.
|
Alert level B
ABSTM02_ALERT_3_B The ratio of expected to reported Tmax/Tmin(RR) is > 1.50
Tmin and Tmax reported: 0.164 0.218
Tmin and Tmax expected: 0.107 0.217
RR = 1.529
Please check that your absorption correction is appropriate.
PLAT060_ALERT_3_B Ratio Tmax/Tmin (Exp-to-Rep) (too) Large ....... 1.52
Alert level C
CRYSC01_ALERT_1_C The word below has not been recognised as a standard
identifier.
tan
CRYSC01_ALERT_1_C No recognised colour has been given for crystal colour.
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT341_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 7
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2
Br
Alert level G
REFLT03_ALERT_1_G ALERT: Expected hkl max differ from CIF values
From the CIF: _diffrn_reflns_theta_max 35.54
From the CIF: _reflns_number_total 1598
From the CIF: _diffrn_reflns_limit_ max hkl 18. 12. 12.
From the CIF: _diffrn_reflns_limit_ min hkl -18. -12. -12.
TEST1: Expected hkl limits for theta max
Calculated maximum hkl 18. 18. 18.
Calculated minimum hkl -18. -18. -18.
REFLT03_ALERT_4_G WARNING: Large fraction of Friedel related reflns may
be needed to determine absolute structure
From the CIF: _diffrn_reflns_theta_max 35.54
From the CIF: _reflns_number_total 1598
Count of symmetry unique reflns 1166
Completeness (_total/calc) 137.05%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 432
Fraction of Friedel pairs measured 0.370
Are heavy atom types Z>Si present yes
1 ALERT level A = In general: serious problem
2 ALERT level B = Potentially serious problem
5 ALERT level C = Check and explain
2 ALERT level G = General alerts; check
5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: COLLECT (Nonius 2000); cell refinement: DENZO and SCALEPACK version 1.96.2 (Otwinowski & Minor, 1997); data reduction: DENZO and SCALEPACK version 1.96.2 (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR92 (Altomare, et al. 1993); program(s) used to refine structure: TEXSAN for Windows version 1.06 (MSC, 1997-1999); software used to prepare material for publication: TEXSAN for Windows version 1.06 (MSC, 1997-1999).
Crystal data top
C6H21N4·3(Br) | Dx = 1.921 Mg m−3 |
Mr = 388.97 | Mo Kα radiation, λ = 0.7107 Å |
Cubic, P213 | Cell parameters from 1167 reflections |
Hall symbol: P 2ac 2ab 3 | θ = 2.5–35.5° |
a = 11.038 (2) Å | µ = 9.00 mm−1 |
V = 1344.8 (4) Å3 | T = 100 K |
Z = 4 | Fragment, tan |
F(000) = 760.0 | 0.27 × 0.22 × 0.17 mm |
Data collection top
KappaCCD (with Oxford Cryostream) diffractometer | 1598 independent reflections |
Radiation source: fine-focus sealed tube | 1335 reflections with I > 3.00σ(I) |
Graphite monochromator | Rint = 0.042 |
ω scans with κ offsets | θmax = 35.5°, θmin = 2.6° |
Absorption correction: multi-scan HKL Scalepack (Otwinowski & Minor 1997) | h = −18→18 |
Tmin = 0.164, Tmax = 0.218 | k = −12→12 |
14942 measured reflections | l = −12→12 |
Refinement top
Refinement on F2 | 0 restraints |
Least-squares matrix: full | 24 constraints |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters not refined |
wR(F2) = 0.145 | Weighting scheme based on measured s.u.'s w = 1/[σ2(Fo) + 0.00331|Fo|2] |
S = 1.09 | (Δ/σ)max = 0.0002 |
1335 reflections | Δρmax = 0.73 e Å−3 |
40 parameters | Δρmin = −1.36 e Å−3 |
Special details top
Refinement. Refinement of F2. The weighted R-factor wR and goodness
of fit are based on F2, conventional R-factors R are
based on F. R-factors based on F2 are statistically about
twice as large as those based on F. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Br1 | −0.17771 (5) | −0.1777 | −0.1777 | 0.01888 (4) | |
Br2 | 0.30081 (5) | 0.3008 | 0.3008 | 0.01720 (4) | |
Br3 | 0.54581 (4) | 0.5458 | 0.5458 | 0.01311 (4) | |
N1 | 0.0404 (4) | 0.0139 (5) | −0.2475 (4) | 0.0186 (9) | |
N2 | 0.0252 (4) | 0.0252 | 0.0252 | 0.0087 (2) | |
C1 | 0.1445 (4) | 0.0401 (5) | −0.1640 (4) | 0.0128 (9) | |
C2 | 0.1009 (4) | 0.1038 (4) | −0.0508 (5) | 0.0132 (8) | |
H1 | −0.0302 | −0.0024 | −0.2011 | 0.022* | |
H2 | 0.0593 | −0.0546 | −0.2962 | 0.022* | |
H3 | 0.0264 | 0.0821 | −0.2981 | 0.022* | |
H4 | 0.1824 | −0.0339 | −0.1419 | 0.015* | |
H5 | 0.2014 | 0.0904 | −0.2046 | 0.015* | |
H6 | 0.0548 | 0.1727 | −0.0739 | 0.016* | |
H7 | 0.1693 | 0.1290 | −0.0051 | 0.016* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Br1 | 0.0189 (2) | 0.0189 | 0.0189 | −0.0036 (2) | −0.0036 | −0.0036 |
Br2 | 0.0171 (2) | 0.0171 | 0.0171 | 0.0016 (5) | 0.0016 | −0.0016 |
Br3 | 0.0131 (2) | 0.0131 | 0.0131 | −0.0047 (5) | 0.0047 | −0.0047 |
N1 | 0.016 (2) | 0.028 (2) | 0.013 (2) | 0.001 (2) | −0.001 (1) | −0.001 (2) |
N2 | 0.0087 (10) | 0.0087 | 0.0087 | 0.0006 (10) | 0.0006 | 0.0006 |
C1 | 0.011 (2) | 0.014 (2) | 0.012 (2) | −0.001 (1) | 0.0016 (13) | 0.000 (1) |
C2 | 0.013 (2) | 0.008 (2) | 0.019 (2) | −0.0016 (13) | 0.003 (2) | 0.000 (1) |
Geometric parameters (Å, º) top
N1—C1 | 1.501 (6) | N2—C2ii | 1.468 (5) |
N1—H1 | 0.95 | C1—C2 | 1.512 (7) |
N1—H2 | 0.95 | C1—H4 | 0.95 |
N1—H3 | 0.95 | C1—H5 | 0.95 |
N2—C2 | 1.468 (5) | C2—H6 | 0.95 |
N2—C2i | 1.468 (5) | C2—H7 | 0.95 |
| | | |
BR1···N1 | 3.296 (5) | BR2···H3iv | 2.805 |
BR1···H1 | 2.542 | BR3···N1iv | 3.359 (4) |
BR1···C1iii | 3.590 (5) | BR3···H2iv | 2.762 |
BR2···N1iv | 3.395 (5) | | |
| | | |
C2—N2—C2i | 109.1 (3) | N1—C1—H4 | 109.17 |
C2—N2—C2ii | 109.1 (3) | N1—C1—H5 | 109.17 |
C2i—N2—C2ii | 109.1 (3) | C2—C1—H4 | 109.17 |
N1—C1—C2 | 110.7 (4) | C2—C1—H5 | 109.17 |
N2—C2—C1 | 112.3 (4) | H4—C1—H5 | 109.46 |
C1—N1—H1 | 109.47 | N2—C2—H6 | 108.77 |
C1—N1—H2 | 109.47 | N2—C2—H7 | 108.77 |
C1—N1—H3 | 109.47 | C1—C2—H6 | 108.77 |
H1—N1—H2 | 109.47 | C1—C2—H7 | 108.77 |
H1—N1—H3 | 109.47 | H6—C2—H7 | 109.46 |
H2—N1—H3 | 109.47 | | |
| | | |
N1—C1—C2—N2 | 67.4 (5) | C1—C2—N2—C2ii | 82.9 (6) |
C1—C2—N2—C2i | −158.0 (4) | | |
Symmetry codes: (i) z, x, y; (ii) y, z, x; (iii) y−1/2, −z−1/2, −x; (iv) x+1/2, −y+1/2, −z. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···Br1 | 0.95 | 2.54 | 3.296 (5) | 136 |
N1—H2···Br3v | 0.95 | 2.76 | 3.359 (4) | 122 |
N1—H3···Br2v | 0.95 | 2.81 | 3.395 (5) | 121 |
Symmetry code: (v) x−1/2, −y+1/2, −z. |