Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810041590/gk2309sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810041590/gk2309Isup2.hkl |
CCDC reference: 799476
Key indicators
- Single-crystal X-ray study
- T = 130 K
- Mean (C-C) = 0.007 Å
- R factor = 0.043
- wR factor = 0.102
- Data-to-parameter ratio = 16.8
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- Cl1 .. 10.73 su PLAT972_ALERT_2_B Large Calcd. Non-Metal Negative Residual Density -2.77 eA-3
Alert level C PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 4
Alert level G PLAT063_ALERT_4_G Crystal Size Likely too Large for Beam Size .... 0.80 mm
0 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 2 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A solution of 73.33 mg (0.4 mmol) of cadmium (II) chloride in 20 ml of water was added to a solution of 116.92 mg (0.8 mmol) of 3H-quinazolin-4-one in 30 ml of acetone. A precipitate formed immediately which was recovered by filtration. Single crystals suitable for the diffraction experiment were obtained by dissolving this precipitate in a 1:3 water:acetone mixture and slow evaporation at room temperature. The crystals grew as colourless needles.
Carbon-bound H atoms were positioned geometrically and treated as riding on their C atoms, with C—H distances of 0.93 Å (aromatic) and were refined with Uiso(H)=1.2Ueq(C). Nitrogen-bound H atom involved in the intermolecular hydrogen bonding was located by difference Fourier synthesis and refined freely [N—H =0.87 (5) Å].
The title compound represents the first crystal structure of a complex in which 3H-quinazolin-4-one acts as a ligand; the uncoordinated organic molecule has not been reported neither. The title compound is a chain polymer in which each Cd(II) cation is coordinated by four bridging chloro ligands in the equatorial plane and two monodentate 3H-quinazolin-4-one ligands in the axial positions of a pseudo-octahedron. The chain direction corresponds to the shortest lattice parameter; a section of the polymer is shown in Fig. 1. The metal···nitrogen vector and the metal–halide plane subtend an angle of 84.5 (1)°. The angle N—Cd—Nii (ii:-x, y, 1/2 - z) amounts to 175.3 (2)°, and the dihedral angle between the least squares plane through the ligand and the metal–halide plane to 67.00 (6)°. Tilting of the ligand molecules in this structure is stabilized by intermolecular N—H···O hydrogen bonds around crystallographic inversion centers (Table 1, Fig.2).
The crystal structure of 3H-pyrimidin-4-one was reported by Vaillancourt et al. (1998). For related Cd(II) coordination polymers, see: Hu & Englert (2002); Hu et al. (2003); Englert & Schiffers (2006a,b); Cao et al. (2008). For a general review of halide-bridged chain polymers, see: Englert (2010).
Data collection: SMART (Bruker,2000); cell refinement: SAINT-Plus (Bruker, 1999); data reduction: SAINT-Plus (Bruker, 1999); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: XP in SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
Fig. 1. Section of the chain polymer, viewed along the c axis. | |
Fig. 2. Projection of the structure along the b direction. |
[CdCl2(C8H6N2O)2] | F(000) = 936 |
Mr = 475.60 | Dx = 1.967 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 8356 reflections |
a = 28.839 (6) Å | θ = 2.3–28.4° |
b = 3.7309 (7) Å | µ = 1.71 mm−1 |
c = 17.846 (4) Å | T = 130 K |
β = 123.26 (3)° | Needle, colourless |
V = 1605.6 (8) Å3 | 0.80 × 0.03 × 0.02 mm |
Z = 4 |
Bruker SMART APEX diffractometer | 1983 independent reflections |
Radiation source: fine-focus sealed tube | 1831 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.081 |
ω scans | θmax = 28.4°, θmin = 2.3° |
Absorption correction: multi-scan (MULABS; Blessing, 1995) | h = −38→38 |
Tmin = 0.936, Tmax = 0.958 | k = −4→4 |
10107 measured reflections | l = −23→23 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.043 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.102 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | w = 1/[σ2(Fo2) + (0.045P)2] where P = (Fo2 + 2Fc2)/3 |
1983 reflections | (Δ/σ)max < 0.001 |
118 parameters | Δρmax = 0.91 e Å−3 |
0 restraints | Δρmin = −2.47 e Å−3 |
[CdCl2(C8H6N2O)2] | V = 1605.6 (8) Å3 |
Mr = 475.60 | Z = 4 |
Monoclinic, C2/c | Mo Kα radiation |
a = 28.839 (6) Å | µ = 1.71 mm−1 |
b = 3.7309 (7) Å | T = 130 K |
c = 17.846 (4) Å | 0.80 × 0.03 × 0.02 mm |
β = 123.26 (3)° |
Bruker SMART APEX diffractometer | 1983 independent reflections |
Absorption correction: multi-scan (MULABS; Blessing, 1995) | 1831 reflections with I > 2σ(I) |
Tmin = 0.936, Tmax = 0.958 | Rint = 0.081 |
10107 measured reflections |
R[F2 > 2σ(F2)] = 0.043 | 0 restraints |
wR(F2) = 0.102 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.16 | Δρmax = 0.91 e Å−3 |
1983 reflections | Δρmin = −2.47 e Å−3 |
118 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.0000 | 0.41717 (11) | 0.2500 | 0.02822 (14) | |
Cl1 | 0.03110 (4) | 0.9258 (3) | 0.36946 (6) | 0.0345 (2) | |
O1 | 0.25065 (13) | 0.8403 (9) | 0.4033 (2) | 0.0456 (8) | |
N1 | 0.09451 (14) | 0.4438 (9) | 0.2882 (2) | 0.0345 (7) | |
C2 | 0.12966 (17) | 0.4725 (11) | 0.3729 (3) | 0.0348 (9) | |
H2 | 0.1180 | 0.4045 | 0.4102 | 0.042* | |
N3 | 0.18220 (15) | 0.5931 (11) | 0.4126 (3) | 0.0389 (8) | |
C4 | 0.20342 (17) | 0.7146 (12) | 0.3647 (3) | 0.0371 (9) | |
C4A | 0.16615 (17) | 0.6802 (11) | 0.2686 (3) | 0.0341 (9) | |
C5 | 0.18303 (17) | 0.7898 (12) | 0.2120 (3) | 0.0373 (9) | |
H5 | 0.2179 | 0.8906 | 0.2359 | 0.045* | |
C6 | 0.14774 (18) | 0.7473 (13) | 0.1212 (3) | 0.0410 (9) | |
H6 | 0.1587 | 0.8181 | 0.0831 | 0.049* | |
C7 | 0.09534 (19) | 0.5976 (13) | 0.0859 (3) | 0.0406 (9) | |
H7 | 0.0718 | 0.5669 | 0.0243 | 0.049* | |
C8 | 0.07797 (18) | 0.4957 (10) | 0.1400 (3) | 0.0343 (9) | |
H8 | 0.0428 | 0.3983 | 0.1151 | 0.041* | |
C8A | 0.11298 (17) | 0.5373 (11) | 0.2328 (3) | 0.0333 (8) | |
H3 | 0.206 (2) | 0.609 (13) | 0.470 (3) | 0.040 (13)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.0258 (2) | 0.0272 (2) | 0.0302 (2) | 0.000 | 0.01445 (17) | 0.000 |
Cl1 | 0.0353 (5) | 0.0325 (5) | 0.0343 (5) | 0.0002 (4) | 0.0182 (4) | 0.0008 (4) |
O1 | 0.0363 (16) | 0.055 (2) | 0.0443 (17) | −0.0100 (14) | 0.0211 (14) | −0.0023 (15) |
N1 | 0.0304 (16) | 0.0340 (18) | 0.0388 (18) | −0.0007 (14) | 0.0188 (15) | −0.0008 (15) |
C2 | 0.0326 (19) | 0.033 (2) | 0.040 (2) | −0.0001 (16) | 0.0205 (18) | 0.0015 (17) |
N3 | 0.0307 (17) | 0.047 (2) | 0.0354 (19) | −0.0019 (16) | 0.0158 (16) | 0.0004 (17) |
C4 | 0.033 (2) | 0.035 (2) | 0.041 (2) | −0.0013 (17) | 0.0192 (18) | −0.0019 (18) |
C4A | 0.0321 (19) | 0.030 (2) | 0.040 (2) | −0.0001 (16) | 0.0194 (18) | 0.0002 (16) |
C5 | 0.033 (2) | 0.033 (2) | 0.049 (2) | 0.0009 (17) | 0.0244 (19) | 0.0025 (18) |
C6 | 0.044 (2) | 0.040 (2) | 0.047 (2) | 0.003 (2) | 0.030 (2) | 0.001 (2) |
C7 | 0.042 (2) | 0.042 (2) | 0.039 (2) | 0.004 (2) | 0.0231 (19) | −0.0009 (19) |
C8 | 0.034 (2) | 0.0256 (19) | 0.042 (2) | 0.0015 (15) | 0.0196 (18) | −0.0011 (15) |
C8A | 0.0332 (19) | 0.0272 (19) | 0.041 (2) | 0.0031 (16) | 0.0217 (18) | 0.0010 (16) |
Cd1—N1 | 2.422 (3) | N3—H3 | 0.87 (5) |
Cd1—N1i | 2.422 (3) | C4—C4A | 1.445 (6) |
Cd1—Cl1ii | 2.5714 (11) | C4A—C5 | 1.402 (6) |
Cd1—Cl1iii | 2.5714 (11) | C4A—C8A | 1.403 (6) |
Cd1—Cl1 | 2.6180 (11) | C5—C6 | 1.370 (6) |
Cd1—Cl1i | 2.6180 (11) | C5—H5 | 0.9300 |
Cl1—Cd1iv | 2.5714 (11) | C6—C7 | 1.396 (6) |
O1—C4 | 1.233 (5) | C6—H6 | 0.9300 |
N1—C2 | 1.283 (6) | C7—C8 | 1.363 (6) |
N1—C8A | 1.400 (5) | C7—H7 | 0.9300 |
C2—N3 | 1.350 (5) | C8—C8A | 1.397 (6) |
C2—H2 | 0.9300 | C8—H8 | 0.9300 |
N3—C4 | 1.373 (6) | ||
N1—Cd1—N1i | 175.31 (17) | C2—N3—H3 | 124 (3) |
N1—Cd1—Cl1ii | 95.13 (9) | C4—N3—H3 | 113 (3) |
N1i—Cd1—Cl1ii | 88.22 (9) | O1—C4—N3 | 120.7 (4) |
N1—Cd1—Cl1iii | 88.22 (9) | O1—C4—C4A | 124.8 (4) |
N1i—Cd1—Cl1iii | 95.13 (9) | N3—C4—C4A | 114.4 (4) |
Cl1ii—Cd1—Cl1iii | 89.06 (5) | C5—C4A—C8A | 120.5 (4) |
N1—Cd1—Cl1 | 84.90 (9) | C5—C4A—C4 | 120.2 (4) |
N1i—Cd1—Cl1 | 91.69 (9) | C8A—C4A—C4 | 119.4 (4) |
Cl1ii—Cd1—Cl1 | 179.01 (3) | C6—C5—C4A | 119.5 (4) |
Cl1iii—Cd1—Cl1 | 91.93 (4) | C6—C5—H5 | 120.2 |
N1—Cd1—Cl1i | 91.69 (9) | C4A—C5—H5 | 120.2 |
N1i—Cd1—Cl1i | 84.90 (9) | C5—C6—C7 | 119.8 (4) |
Cl1ii—Cd1—Cl1i | 91.93 (4) | C5—C6—H6 | 120.1 |
Cl1iii—Cd1—Cl1i | 179.01 (3) | C7—C6—H6 | 120.1 |
Cl1—Cd1—Cl1i | 87.08 (5) | C8—C7—C6 | 121.3 (4) |
Cd1iv—Cl1—Cd1 | 91.93 (4) | C8—C7—H7 | 119.3 |
C2—N1—C8A | 116.8 (4) | C6—C7—H7 | 119.3 |
C2—N1—Cd1 | 112.0 (3) | C7—C8—C8A | 120.1 (4) |
C8A—N1—Cd1 | 128.1 (3) | C7—C8—H8 | 120.0 |
N1—C2—N3 | 125.5 (4) | C8A—C8—H8 | 120.0 |
N1—C2—H2 | 117.3 | C8—C8A—N1 | 120.1 (4) |
N3—C2—H2 | 117.3 | C8—C8A—C4A | 118.8 (4) |
C2—N3—C4 | 122.6 (4) | N1—C8A—C4A | 121.1 (4) |
Symmetry codes: (i) −x, y, −z+1/2; (ii) −x, y−1, −z+1/2; (iii) x, y−1, z; (iv) x, y+1, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···O1v | 0.87 (5) | 1.90 (4) | 2.762 (5) | 172 (6) |
Symmetry code: (v) −x+1/2, −y+3/2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | [CdCl2(C8H6N2O)2] |
Mr | 475.60 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 130 |
a, b, c (Å) | 28.839 (6), 3.7309 (7), 17.846 (4) |
β (°) | 123.26 (3) |
V (Å3) | 1605.6 (8) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 1.71 |
Crystal size (mm) | 0.80 × 0.03 × 0.02 |
Data collection | |
Diffractometer | Bruker SMART APEX diffractometer |
Absorption correction | Multi-scan (MULABS; Blessing, 1995) |
Tmin, Tmax | 0.936, 0.958 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10107, 1983, 1831 |
Rint | 0.081 |
(sin θ/λ)max (Å−1) | 0.668 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.102, 1.16 |
No. of reflections | 1983 |
No. of parameters | 118 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.91, −2.47 |
Computer programs: SMART (Bruker,2000), SAINT-Plus (Bruker, 1999), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), XP in SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H3···O1i | 0.87 (5) | 1.90 (4) | 2.762 (5) | 172 (6) |
Symmetry code: (i) −x+1/2, −y+3/2, −z+1. |
The title compound represents the first crystal structure of a complex in which 3H-quinazolin-4-one acts as a ligand; the uncoordinated organic molecule has not been reported neither. The title compound is a chain polymer in which each Cd(II) cation is coordinated by four bridging chloro ligands in the equatorial plane and two monodentate 3H-quinazolin-4-one ligands in the axial positions of a pseudo-octahedron. The chain direction corresponds to the shortest lattice parameter; a section of the polymer is shown in Fig. 1. The metal···nitrogen vector and the metal–halide plane subtend an angle of 84.5 (1)°. The angle N—Cd—Nii (ii:-x, y, 1/2 - z) amounts to 175.3 (2)°, and the dihedral angle between the least squares plane through the ligand and the metal–halide plane to 67.00 (6)°. Tilting of the ligand molecules in this structure is stabilized by intermolecular N—H···O hydrogen bonds around crystallographic inversion centers (Table 1, Fig.2).