Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810042777/gk2311sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810042777/gk2311Isup2.hkl |
CCDC reference: 799704
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.003 Å
- R factor = 0.043
- wR factor = 0.111
- Data-to-parameter ratio = 12.6
checkCIF/PLATON results
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Alert level C PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.599 6 PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ ?
Alert level G PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 7 PLAT128_ALERT_4_G Alternate Setting of Space-group P21/c ....... P21/n
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of ferulic acid (0.388 g, 2 mmol) and ammonia (0.15 ml, 2 mmol) was stirred with methanol (20 ml) for 0.5 h at room temperature. After several days colourless block-like crystals, suitable for X-ray diffraction analysis, were obtained by slow evaporation of the solution.
The H atoms of water molecule and ammonium cation were found from difference Fourier maps and refined isotropically with a restraint of O—H = 0.87 (2) Å and H1W···H2W = 1.39 (2) Å for water molecule, N—H = 0.87 (2) Å for ammonium cation, and Uiso(H) = 1.5 Ueq(O, N). All other H atoms were positioned geometrically and refined as riding, with C—H = 0.93–0.96 Å, O—H = 0.82 Å, and with Uiso(H) = 1.2 or 1.5 Ueq(C, O).
3-(4-Hydroxy-3-methoxyphenyl)-2-propenoic acid, also known as ferulic acid, is one of the main endogenous phenolic acids in plant kingdom (Liyama et al., 1994). Attention was paid to the structural modifications of ferulic acid owing to its extensive bioactivities including anti-platelet aggregation, anti-oxidation, anti-inflammation, anti-tumor, anti-mutagenicity, antibiosis and immunity enchancement (Hirabayashi et al., 1995; Ogiwara et al., 2002). A series of ferulic acid derivatives were designed and synthesized, such as their salts, esters, ethers and amides, and some of them show the better bioactivities than those of ferulic acid (Nomura et al., 2003; Ou et al., 2003). The molecular and crystal structure of the title compound is presented in this article.
In the asymmetric unit of the title compound, illustrated in Fig. 1, there are an ammonium cation, one singly deprotonated 3-(4-hydroxy-3-methoxyphenyl)-2-propenoate anion, and one water molecule. The molecules are self-assembled by various O—H···O and N—H···O hydrogen bonds (Table 1 and Fig. 2), resulting in the formation of a three-dimensional supramolecular network.
For the biological activity of ferulic acid, see: Hirabayashi et al. (1995); Liyama et al. (1994); Nomura et al. (2003); Ogiwara et al. (2002); Ou et al. (2003).
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
NH4+·C10H9O4−·H2O | F(000) = 488 |
Mr = 229.23 | Dx = 1.305 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 1012 reflections |
a = 8.6613 (19) Å | θ = 2.5–21.0° |
b = 8.3282 (18) Å | µ = 0.11 mm−1 |
c = 16.457 (4) Å | T = 296 K |
β = 100.525 (3)° | Block, colourless |
V = 1167.1 (5) Å3 | 0.30 × 0.27 × 0.26 mm |
Z = 4 |
Bruker APEXII diffractometer | 1348 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.040 |
Graphite monochromator | θmax = 25.2°, θmin = 2.5° |
φ and ω scan | h = −9→10 |
5831 measured reflections | k = −9→9 |
2090 independent reflections | l = −19→19 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.043 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.111 | w = 1/[σ2(Fo2) + (0.0482P)2 + 0.106P] where P = (Fo2 + 2Fc2)/3 |
S = 1.01 | (Δ/σ)max < 0.001 |
2090 reflections | Δρmax = 0.18 e Å−3 |
166 parameters | Δρmin = −0.18 e Å−3 |
7 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.011 (2) |
NH4+·C10H9O4−·H2O | V = 1167.1 (5) Å3 |
Mr = 229.23 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 8.6613 (19) Å | µ = 0.11 mm−1 |
b = 8.3282 (18) Å | T = 296 K |
c = 16.457 (4) Å | 0.30 × 0.27 × 0.26 mm |
β = 100.525 (3)° |
Bruker APEXII diffractometer | 1348 reflections with I > 2σ(I) |
5831 measured reflections | Rint = 0.040 |
2090 independent reflections |
R[F2 > 2σ(F2)] = 0.043 | 7 restraints |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.01 | Δρmax = 0.18 e Å−3 |
2090 reflections | Δρmin = −0.18 e Å−3 |
166 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.9208 (2) | −0.0647 (2) | 0.33845 (13) | 0.0374 (5) | |
C2 | 0.9382 (2) | 0.0503 (2) | 0.27793 (12) | 0.0361 (5) | |
C3 | 0.8765 (2) | 0.2015 (2) | 0.28226 (13) | 0.0413 (5) | |
H3 | 0.8884 | 0.2782 | 0.2428 | 0.050* | |
C4 | 0.7969 (2) | 0.2398 (3) | 0.34519 (14) | 0.0432 (6) | |
H4 | 0.7547 | 0.3421 | 0.3470 | 0.052* | |
C5 | 0.7786 (2) | 0.1292 (2) | 0.40548 (13) | 0.0387 (5) | |
C6 | 0.8419 (2) | −0.0247 (2) | 0.40114 (13) | 0.0402 (5) | |
H6 | 0.8306 | −0.1007 | 0.4410 | 0.048* | |
C7 | 0.9605 (3) | −0.3375 (3) | 0.38312 (16) | 0.0617 (7) | |
H7A | 1.0047 | −0.3081 | 0.4389 | 0.093* | |
H7B | 1.0094 | −0.4342 | 0.3687 | 0.093* | |
H7C | 0.8496 | −0.3550 | 0.3785 | 0.093* | |
C8 | 0.6979 (2) | 0.1798 (3) | 0.47158 (13) | 0.0438 (6) | |
H8 | 0.6529 | 0.2815 | 0.4650 | 0.053* | |
C9 | 0.6790 (2) | 0.1034 (3) | 0.53912 (13) | 0.0438 (6) | |
H9 | 0.7113 | −0.0031 | 0.5454 | 0.053* | |
C10 | 0.6093 (3) | 0.1780 (3) | 0.60560 (14) | 0.0413 (5) | |
O1 | 0.98669 (18) | −0.21136 (16) | 0.32848 (9) | 0.0492 (4) | |
O2 | 1.01519 (18) | 0.00231 (17) | 0.21705 (9) | 0.0479 (4) | |
H2 | 1.0125 | 0.0744 | 0.1829 | 0.072* | |
O3 | 0.5464 (2) | 0.31626 (18) | 0.59297 (9) | 0.0557 (5) | |
O4 | 0.61918 (18) | 0.10581 (17) | 0.67298 (9) | 0.0503 (4) | |
N1 | 0.6808 (3) | 0.7821 (2) | 0.69610 (14) | 0.0506 (5) | |
H10 | 0.674 (3) | 0.894 (2) | 0.6905 (15) | 0.076* | |
H11 | 0.595 (2) | 0.740 (3) | 0.7154 (16) | 0.076* | |
H12 | 0.685 (3) | 0.733 (3) | 0.6460 (12) | 0.076* | |
H13 | 0.764 (2) | 0.748 (3) | 0.7335 (14) | 0.076* | |
O1W | 0.3143 (2) | 0.3867 (2) | 0.45407 (11) | 0.0698 (6) | |
H1W | 0.381 (3) | 0.358 (3) | 0.4970 (14) | 0.105* | |
H2W | 0.340 (3) | 0.481 (2) | 0.4400 (18) | 0.105* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0408 (12) | 0.0330 (12) | 0.0394 (13) | −0.0007 (9) | 0.0098 (10) | −0.0022 (9) |
C2 | 0.0411 (12) | 0.0403 (12) | 0.0302 (12) | −0.0040 (10) | 0.0150 (10) | −0.0019 (9) |
C3 | 0.0522 (14) | 0.0365 (12) | 0.0379 (13) | 0.0032 (10) | 0.0157 (11) | 0.0069 (10) |
C4 | 0.0514 (14) | 0.0374 (12) | 0.0436 (14) | 0.0050 (10) | 0.0160 (11) | 0.0022 (10) |
C5 | 0.0458 (13) | 0.0380 (12) | 0.0351 (12) | 0.0004 (10) | 0.0146 (10) | −0.0029 (10) |
C6 | 0.0506 (13) | 0.0395 (12) | 0.0325 (12) | −0.0025 (10) | 0.0128 (10) | 0.0036 (10) |
C7 | 0.0783 (19) | 0.0395 (14) | 0.0704 (19) | 0.0025 (12) | 0.0220 (15) | 0.0129 (12) |
C8 | 0.0524 (14) | 0.0392 (12) | 0.0431 (14) | 0.0014 (10) | 0.0171 (11) | −0.0034 (10) |
C9 | 0.0572 (14) | 0.0362 (12) | 0.0414 (14) | 0.0010 (11) | 0.0182 (11) | −0.0016 (10) |
C10 | 0.0491 (14) | 0.0399 (13) | 0.0374 (13) | −0.0037 (11) | 0.0143 (11) | −0.0042 (11) |
O1 | 0.0673 (10) | 0.0356 (9) | 0.0503 (10) | 0.0052 (7) | 0.0253 (8) | 0.0039 (7) |
O2 | 0.0635 (10) | 0.0432 (9) | 0.0443 (10) | 0.0073 (8) | 0.0290 (8) | 0.0043 (7) |
O3 | 0.0868 (13) | 0.0443 (10) | 0.0416 (10) | 0.0147 (8) | 0.0259 (9) | 0.0026 (7) |
O4 | 0.0731 (11) | 0.0449 (9) | 0.0375 (9) | 0.0043 (8) | 0.0223 (8) | 0.0025 (7) |
N1 | 0.0660 (15) | 0.0430 (12) | 0.0436 (13) | −0.0077 (11) | 0.0120 (11) | 0.0037 (10) |
O1W | 0.0854 (14) | 0.0635 (12) | 0.0582 (13) | 0.0016 (11) | 0.0068 (10) | −0.0008 (10) |
C1—O1 | 1.371 (2) | C7—H7C | 0.9600 |
C1—C6 | 1.378 (3) | C8—C9 | 1.317 (3) |
C1—C2 | 1.409 (3) | C8—H8 | 0.9300 |
C2—O2 | 1.361 (2) | C9—C10 | 1.480 (3) |
C2—C3 | 1.375 (3) | C9—H9 | 0.9300 |
C3—C4 | 1.383 (3) | C10—O4 | 1.250 (2) |
C3—H3 | 0.9300 | C10—O3 | 1.274 (2) |
C4—C5 | 1.384 (3) | O2—H2 | 0.8200 |
C4—H4 | 0.9300 | N1—H10 | 0.942 (17) |
C5—C6 | 1.401 (3) | N1—H11 | 0.927 (17) |
C5—C8 | 1.458 (3) | N1—H12 | 0.926 (17) |
C6—H6 | 0.9300 | N1—H13 | 0.903 (17) |
C7—O1 | 1.428 (2) | O1W—H1W | 0.863 (16) |
C7—H7A | 0.9600 | O1W—H2W | 0.863 (16) |
C7—H7B | 0.9600 | ||
O1—C1—C6 | 125.42 (19) | O1—C7—H7C | 109.5 |
O1—C1—C2 | 114.84 (18) | H7A—C7—H7C | 109.5 |
C6—C1—C2 | 119.74 (19) | H7B—C7—H7C | 109.5 |
O2—C2—C3 | 123.65 (18) | C9—C8—C5 | 129.8 (2) |
O2—C2—C1 | 116.80 (18) | C9—C8—H8 | 115.1 |
C3—C2—C1 | 119.54 (18) | C5—C8—H8 | 115.1 |
C2—C3—C4 | 120.12 (19) | C8—C9—C10 | 123.5 (2) |
C2—C3—H3 | 119.9 | C8—C9—H9 | 118.3 |
C4—C3—H3 | 119.9 | C10—C9—H9 | 118.3 |
C3—C4—C5 | 121.45 (19) | O4—C10—O3 | 122.48 (19) |
C3—C4—H4 | 119.3 | O4—C10—C9 | 118.9 (2) |
C5—C4—H4 | 119.3 | O3—C10—C9 | 118.6 (2) |
C4—C5—C6 | 118.34 (19) | C1—O1—C7 | 117.54 (17) |
C4—C5—C8 | 118.43 (19) | C2—O2—H2 | 109.5 |
C6—C5—C8 | 123.21 (19) | H10—N1—H11 | 111 (2) |
C1—C6—C5 | 120.79 (19) | H10—N1—H12 | 111 (2) |
C1—C6—H6 | 119.6 | H11—N1—H12 | 108 (2) |
C5—C6—H6 | 119.6 | H10—N1—H13 | 114 (2) |
O1—C7—H7A | 109.5 | H11—N1—H13 | 104 (2) |
O1—C7—H7B | 109.5 | H12—N1—H13 | 108 (2) |
H7A—C7—H7B | 109.5 | H1W—O1W—H2W | 108 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H2W···O3i | 0.86 (2) | 2.07 (2) | 2.918 (2) | 167 (3) |
O1W—H1W···O3 | 0.86 (2) | 1.96 (2) | 2.817 (2) | 173 (3) |
N1—H13···O4ii | 0.90 (2) | 2.06 (2) | 2.904 (3) | 156 (2) |
N1—H12···O1Wi | 0.93 (2) | 1.93 (2) | 2.850 (3) | 175 (2) |
N1—H11···O1iii | 0.93 (2) | 2.25 (2) | 3.043 (3) | 144 (2) |
N1—H11···O2iii | 0.93 (2) | 2.14 (2) | 2.823 (2) | 130 (2) |
N1—H10···O4iv | 0.94 (2) | 1.83 (2) | 2.761 (3) | 169 (2) |
O2—H2···O3v | 0.82 | 1.81 | 2.594 (2) | 160 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+3/2, y+1/2, −z+3/2; (iii) x−1/2, −y+1/2, z+1/2; (iv) x, y+1, z; (v) x+1/2, −y+1/2, z−1/2. |
Experimental details
Crystal data | |
Chemical formula | NH4+·C10H9O4−·H2O |
Mr | 229.23 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 8.6613 (19), 8.3282 (18), 16.457 (4) |
β (°) | 100.525 (3) |
V (Å3) | 1167.1 (5) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.30 × 0.27 × 0.26 |
Data collection | |
Diffractometer | Bruker APEXII |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5831, 2090, 1348 |
Rint | 0.040 |
(sin θ/λ)max (Å−1) | 0.599 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.111, 1.01 |
No. of reflections | 2090 |
No. of parameters | 166 |
No. of restraints | 7 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.18, −0.18 |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H2W···O3i | 0.863 (16) | 2.071 (18) | 2.918 (2) | 167 (3) |
O1W—H1W···O3 | 0.863 (16) | 1.958 (17) | 2.817 (2) | 173 (3) |
N1—H13···O4ii | 0.903 (17) | 2.057 (19) | 2.904 (3) | 156 (2) |
N1—H12···O1Wi | 0.926 (17) | 1.927 (18) | 2.850 (3) | 175 (2) |
N1—H11···O1iii | 0.927 (17) | 2.25 (2) | 3.043 (3) | 144 (2) |
N1—H11···O2iii | 0.927 (17) | 2.14 (2) | 2.823 (2) | 130 (2) |
N1—H10···O4iv | 0.942 (17) | 1.831 (17) | 2.761 (3) | 169 (2) |
O2—H2···O3v | 0.82 | 1.81 | 2.594 (2) | 160.4 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+3/2, y+1/2, −z+3/2; (iii) x−1/2, −y+1/2, z+1/2; (iv) x, y+1, z; (v) x+1/2, −y+1/2, z−1/2. |
3-(4-Hydroxy-3-methoxyphenyl)-2-propenoic acid, also known as ferulic acid, is one of the main endogenous phenolic acids in plant kingdom (Liyama et al., 1994). Attention was paid to the structural modifications of ferulic acid owing to its extensive bioactivities including anti-platelet aggregation, anti-oxidation, anti-inflammation, anti-tumor, anti-mutagenicity, antibiosis and immunity enchancement (Hirabayashi et al., 1995; Ogiwara et al., 2002). A series of ferulic acid derivatives were designed and synthesized, such as their salts, esters, ethers and amides, and some of them show the better bioactivities than those of ferulic acid (Nomura et al., 2003; Ou et al., 2003). The molecular and crystal structure of the title compound is presented in this article.
In the asymmetric unit of the title compound, illustrated in Fig. 1, there are an ammonium cation, one singly deprotonated 3-(4-hydroxy-3-methoxyphenyl)-2-propenoate anion, and one water molecule. The molecules are self-assembled by various O—H···O and N—H···O hydrogen bonds (Table 1 and Fig. 2), resulting in the formation of a three-dimensional supramolecular network.