The molecules of the title compound, C
19H
15ClN
4O, are linked into a three-dimensional architecture by N—H
O interactions.
Supporting information
CCDC reference: 643011
Key indicators
- Single-crystal X-ray study
- T = 173 K
- Mean (C-C) = 0.003 Å
- R factor = 0.026
- wR factor = 0.084
- Data-to-parameter ratio = 8.1
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT034_ALERT_1_C No Flack Parameter Given. Z .GT. Si, NonCentro . ?
PLAT420_ALERT_2_C D-H Without Acceptor N4 - H4N ... ?
PLAT432_ALERT_2_C Short Inter X...Y Contact Cl1 .. C5 .. 3.21 Ang.
PLAT731_ALERT_1_C Bond Calc 0.88(3), Rep 0.877(10) ...... 3.00 su-Ra
N1 -H1N 1.555 1.555
PLAT731_ALERT_1_C Bond Calc 0.88(3), Rep 0.878(10) ...... 3.00 su-Ra
N4 -H4N 1.555 1.555
PLAT735_ALERT_1_C D-H Calc 0.88(3), Rep 0.880(10) ...... 3.00 su-Ra
N1 -H1N 1.555 1.555
PLAT736_ALERT_1_C H...A Calc 2.02(3), Rep 2.020(10) ...... 3.00 su-Ra
H1N -O1 1.555 3.555
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1
C19 H15 Cl N4 O
Alert level G
REFLT03_ALERT_4_G WARNING: Large fraction of Friedel related reflns may
be needed to determine absolute structure
From the CIF: _diffrn_reflns_theta_max 27.50
From the CIF: _reflns_number_total 1928
Count of symmetry unique reflns 1931
Completeness (_total/calc) 99.84%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 0
Fraction of Friedel pairs measured 0.000
Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
8 ALERT level C = Check and explain
1 ALERT level G = General alerts; check
5 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: publCIF (Westrip, 2007).
2'-[(5-Chloro-1
H-indol-3-yl)methylene]-2-(1
H-indol-3-yl)acetohydrazide
top
Crystal data top
C19H15ClN4O | F(000) = 728 |
Mr = 350.80 | Dx = 1.392 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C -2yc | Cell parameters from 6161 reflections |
a = 13.7442 (2) Å | θ = 2.7–33.9° |
b = 15.0424 (2) Å | µ = 0.24 mm−1 |
c = 8.3120 (1) Å | T = 173 K |
β = 103.095 (1)° | Block, yellow |
V = 1673.78 (4) Å3 | 0.47 × 0.32 × 0.30 mm |
Z = 4 | |
Data collection top
Bruker APEX II CCD diffractometer | 1892 reflections with I > 2σ(I) |
Radiation source: medium-focus sealed tube | Rint = 0.059 |
Graphite monochromator | θmax = 27.5°, θmin = 2.0° |
ω scans | h = −17→17 |
12652 measured reflections | k = −19→19 |
1928 independent reflections | l = −10→10 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.026 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.084 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.15 | w = 1/[σ2(Fo2) + (0.0568P)2 + 0.0652P] where P = (Fo2 + 2Fc2)/3 |
1928 reflections | (Δ/σ)max = 0.001 |
238 parameters | Δρmax = 0.24 e Å−3 |
5 restraints | Δρmin = −0.22 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Cl1 | 0.50000 (4) | 0.55864 (3) | 0.50000 (6) | 0.02693 (15) | |
O1 | 0.16270 (11) | 0.41738 (10) | −0.11024 (17) | 0.0199 (3) | |
N1 | 0.52187 (14) | 0.78206 (12) | −0.0642 (2) | 0.0235 (4) | |
N2 | 0.28012 (13) | 0.55948 (10) | −0.1611 (2) | 0.0162 (3) | |
N3 | 0.21514 (12) | 0.51299 (11) | −0.2862 (2) | 0.0164 (3) | |
N4 | −0.14405 (17) | 0.52291 (18) | −0.4071 (3) | 0.0405 (6) | |
C1 | 0.53003 (15) | 0.73493 (14) | 0.0803 (3) | 0.0210 (4) | |
C2 | 0.60075 (16) | 0.74165 (15) | 0.2289 (3) | 0.0246 (4) | |
H2 | 0.6532 | 0.7841 | 0.2430 | 0.029* | |
C3 | 0.59228 (16) | 0.68441 (14) | 0.3556 (3) | 0.0237 (4) | |
H3 | 0.6402 | 0.6862 | 0.4578 | 0.028* | |
C4 | 0.51301 (15) | 0.62402 (13) | 0.3327 (3) | 0.0197 (4) | |
C5 | 0.44329 (14) | 0.61484 (12) | 0.1845 (2) | 0.0176 (4) | |
H5 | 0.3907 | 0.5727 | 0.1721 | 0.021* | |
C6 | 0.45334 (14) | 0.66997 (12) | 0.0539 (2) | 0.0171 (4) | |
C7 | 0.40108 (15) | 0.67811 (13) | −0.1164 (2) | 0.0187 (4) | |
C8 | 0.44595 (17) | 0.74773 (13) | −0.1811 (3) | 0.0231 (4) | |
H8 | 0.4263 | 0.7685 | −0.2916 | 0.028* | |
C9 | 0.32516 (13) | 0.62370 (12) | −0.2184 (2) | 0.0174 (4) | |
H9 | 0.3072 | 0.6356 | −0.3336 | 0.021* | |
C10 | 0.16111 (14) | 0.44461 (12) | −0.2519 (3) | 0.0152 (4) | |
C11 | 0.09218 (14) | 0.40324 (13) | −0.4026 (2) | 0.0173 (4) | |
H11A | 0.1173 | 0.4172 | −0.5023 | 0.021* | |
H11B | 0.0922 | 0.3378 | −0.3897 | 0.021* | |
C12 | −0.01274 (16) | 0.43775 (13) | −0.4244 (3) | 0.0191 (4) | |
C13 | −0.04244 (18) | 0.51355 (17) | −0.3589 (3) | 0.0318 (5) | |
H13 | 0.0011 | 0.5540 | −0.2898 | 0.038* | |
C14 | −0.18285 (18) | 0.45144 (17) | −0.5027 (3) | 0.0286 (5) | |
C15 | −0.28168 (19) | 0.4297 (2) | −0.5789 (3) | 0.0372 (6) | |
H15 | −0.3356 | 0.4669 | −0.5678 | 0.045* | |
C16 | −0.29792 (17) | 0.3530 (2) | −0.6701 (3) | 0.0357 (6) | |
H16 | −0.3644 | 0.3366 | −0.7215 | 0.043* | |
C17 | −0.21891 (18) | 0.29820 (16) | −0.6895 (3) | 0.0324 (5) | |
H17 | −0.2327 | 0.2459 | −0.7548 | 0.039* | |
C18 | −0.12079 (16) | 0.31930 (14) | −0.6146 (3) | 0.0233 (4) | |
H18 | −0.0674 | 0.2821 | −0.6281 | 0.028* | |
C19 | −0.10217 (14) | 0.39664 (14) | −0.5186 (2) | 0.0188 (4) | |
H1N | 0.5651 (19) | 0.8209 (16) | −0.085 (4) | 0.034 (8)* | |
H3N | 0.205 (3) | 0.531 (3) | −0.389 (2) | 0.046 (9)* | |
H4N | −0.179 (2) | 0.5663 (17) | −0.377 (5) | 0.046 (10)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cl1 | 0.0305 (3) | 0.0286 (3) | 0.0199 (2) | −0.0051 (2) | 0.00189 (18) | 0.00593 (19) |
O1 | 0.0227 (7) | 0.0206 (7) | 0.0154 (7) | −0.0064 (6) | 0.0025 (5) | 0.0008 (6) |
N1 | 0.0281 (9) | 0.0202 (8) | 0.0226 (9) | −0.0103 (7) | 0.0066 (7) | 0.0010 (7) |
N2 | 0.0148 (7) | 0.0172 (8) | 0.0150 (8) | −0.0019 (5) | 0.0002 (6) | −0.0015 (6) |
N3 | 0.0180 (7) | 0.0187 (8) | 0.0113 (7) | −0.0031 (6) | 0.0004 (6) | −0.0008 (6) |
N4 | 0.0297 (11) | 0.0486 (14) | 0.0389 (13) | 0.0165 (9) | −0.0010 (9) | −0.0188 (10) |
C1 | 0.0224 (10) | 0.0188 (9) | 0.0229 (10) | −0.0051 (7) | 0.0070 (8) | −0.0012 (8) |
C2 | 0.0237 (10) | 0.0239 (10) | 0.0254 (10) | −0.0102 (8) | 0.0038 (8) | −0.0043 (8) |
C3 | 0.0218 (10) | 0.0260 (10) | 0.0213 (10) | −0.0041 (8) | 0.0010 (8) | −0.0029 (8) |
C4 | 0.0235 (10) | 0.0181 (9) | 0.0175 (9) | −0.0007 (7) | 0.0050 (7) | 0.0009 (7) |
C5 | 0.0183 (9) | 0.0138 (8) | 0.0207 (9) | −0.0023 (6) | 0.0042 (7) | −0.0016 (7) |
C6 | 0.0159 (8) | 0.0153 (8) | 0.0202 (9) | −0.0013 (6) | 0.0042 (7) | −0.0024 (7) |
C7 | 0.0192 (9) | 0.0172 (8) | 0.0197 (10) | −0.0028 (7) | 0.0042 (7) | 0.0011 (7) |
C8 | 0.0255 (10) | 0.0219 (10) | 0.0214 (10) | −0.0041 (8) | 0.0042 (8) | 0.0023 (8) |
C9 | 0.0165 (9) | 0.0181 (9) | 0.0169 (9) | −0.0002 (7) | 0.0022 (7) | 0.0018 (7) |
C10 | 0.0136 (8) | 0.0156 (8) | 0.0158 (9) | 0.0006 (6) | 0.0020 (7) | −0.0020 (6) |
C11 | 0.0171 (9) | 0.0180 (9) | 0.0156 (8) | −0.0027 (7) | 0.0012 (7) | −0.0035 (7) |
C12 | 0.0183 (10) | 0.0218 (9) | 0.0158 (10) | −0.0011 (7) | 0.0008 (8) | 0.0001 (7) |
C13 | 0.0288 (12) | 0.0332 (12) | 0.0291 (11) | 0.0060 (9) | −0.0021 (9) | −0.0124 (9) |
C14 | 0.0231 (11) | 0.0376 (12) | 0.0239 (12) | 0.0047 (9) | 0.0027 (9) | −0.0022 (9) |
C15 | 0.0179 (11) | 0.0584 (17) | 0.0331 (14) | 0.0090 (10) | 0.0010 (10) | 0.0016 (12) |
C16 | 0.0177 (10) | 0.0506 (15) | 0.0341 (13) | −0.0078 (9) | −0.0039 (9) | 0.0097 (11) |
C17 | 0.0290 (12) | 0.0269 (11) | 0.0347 (13) | −0.0107 (9) | −0.0064 (9) | 0.0034 (9) |
C18 | 0.0209 (9) | 0.0206 (9) | 0.0257 (11) | −0.0028 (7) | −0.0005 (8) | 0.0026 (8) |
C19 | 0.0171 (8) | 0.0226 (9) | 0.0156 (8) | −0.0013 (7) | 0.0017 (7) | 0.0038 (7) |
Geometric parameters (Å, º) top
Cl1—C4 | 1.746 (2) | C7—C8 | 1.384 (3) |
O1—C10 | 1.242 (3) | C7—C9 | 1.441 (3) |
N1—C8 | 1.356 (3) | C8—H8 | 0.9500 |
N1—C1 | 1.377 (3) | C9—H9 | 0.9500 |
N1—H1N | 0.877 (10) | C10—C11 | 1.522 (3) |
N2—C9 | 1.295 (2) | C11—C12 | 1.504 (3) |
N2—N3 | 1.395 (2) | C11—H11A | 0.9900 |
N3—C10 | 1.337 (2) | C11—H11B | 0.9900 |
N3—H3N | 0.879 (10) | C12—C13 | 1.365 (3) |
N4—C13 | 1.370 (3) | C12—C19 | 1.439 (3) |
N4—C14 | 1.371 (4) | C13—H13 | 0.9500 |
N4—H4N | 0.878 (10) | C14—C15 | 1.401 (4) |
C1—C2 | 1.392 (3) | C14—C19 | 1.412 (3) |
C1—C6 | 1.417 (3) | C15—C16 | 1.370 (4) |
C2—C3 | 1.385 (3) | C15—H15 | 0.9500 |
C2—H2 | 0.9500 | C16—C17 | 1.401 (4) |
C3—C4 | 1.398 (3) | C16—H16 | 0.9500 |
C3—H3 | 0.9500 | C17—C18 | 1.388 (3) |
C4—C5 | 1.385 (3) | C17—H17 | 0.9500 |
C5—C6 | 1.397 (3) | C18—C19 | 1.401 (3) |
C5—H5 | 0.9500 | C18—H18 | 0.9500 |
C6—C7 | 1.441 (3) | | |
| | | |
C8—N1—C1 | 109.02 (17) | N2—C9—H9 | 118.3 |
C8—N1—H1N | 124 (2) | C7—C9—H9 | 118.3 |
C1—N1—H1N | 126 (2) | O1—C10—N3 | 124.39 (18) |
C9—N2—N3 | 112.24 (17) | O1—C10—C11 | 121.30 (17) |
C10—N3—N2 | 121.27 (17) | N3—C10—C11 | 114.27 (17) |
C10—N3—H3N | 118 (3) | C12—C11—C10 | 111.04 (16) |
N2—N3—H3N | 120 (3) | C12—C11—H11A | 109.4 |
C13—N4—C14 | 109.0 (2) | C10—C11—H11A | 109.4 |
C13—N4—H4N | 125 (3) | C12—C11—H11B | 109.4 |
C14—N4—H4N | 126 (3) | C10—C11—H11B | 109.4 |
N1—C1—C2 | 129.72 (19) | H11A—C11—H11B | 108.0 |
N1—C1—C6 | 108.02 (18) | C13—C12—C19 | 106.27 (19) |
C2—C1—C6 | 122.2 (2) | C13—C12—C11 | 127.24 (19) |
C3—C2—C1 | 117.86 (19) | C19—C12—C11 | 126.48 (17) |
C3—C2—H2 | 121.1 | C12—C13—N4 | 110.3 (2) |
C1—C2—H2 | 121.1 | C12—C13—H13 | 124.9 |
C2—C3—C4 | 119.8 (2) | N4—C13—H13 | 124.9 |
C2—C3—H3 | 120.1 | N4—C14—C15 | 130.9 (2) |
C4—C3—H3 | 120.1 | N4—C14—C19 | 107.5 (2) |
C5—C4—C3 | 123.14 (19) | C15—C14—C19 | 121.5 (2) |
C5—C4—Cl1 | 118.50 (15) | C16—C15—C14 | 117.8 (2) |
C3—C4—Cl1 | 118.35 (16) | C16—C15—H15 | 121.1 |
C4—C5—C6 | 117.45 (17) | C14—C15—H15 | 121.1 |
C4—C5—H5 | 121.3 | C15—C16—C17 | 121.7 (2) |
C6—C5—H5 | 121.3 | C15—C16—H16 | 119.2 |
C5—C6—C1 | 119.34 (18) | C17—C16—H16 | 119.2 |
C5—C6—C7 | 134.34 (17) | C18—C17—C16 | 120.9 (2) |
C1—C6—C7 | 106.32 (17) | C18—C17—H17 | 119.6 |
C8—C7—C6 | 106.21 (18) | C16—C17—H17 | 119.6 |
C8—C7—C9 | 121.91 (19) | C17—C18—C19 | 118.6 (2) |
C6—C7—C9 | 131.53 (18) | C17—C18—H18 | 120.7 |
N1—C8—C7 | 110.38 (19) | C19—C18—H18 | 120.7 |
N1—C8—H8 | 124.8 | C18—C19—C14 | 119.48 (19) |
C7—C8—H8 | 124.8 | C18—C19—C12 | 133.64 (19) |
N2—C9—C7 | 123.41 (18) | C14—C19—C12 | 106.88 (19) |
| | | |
C9—N2—N3—C10 | −179.52 (17) | N2—N3—C10—O1 | 0.7 (3) |
C8—N1—C1—C2 | 174.9 (2) | N2—N3—C10—C11 | 178.41 (15) |
C8—N1—C1—C6 | −2.0 (2) | O1—C10—C11—C12 | 79.3 (2) |
N1—C1—C2—C3 | −179.0 (2) | N3—C10—C11—C12 | −98.44 (19) |
C6—C1—C2—C3 | −2.4 (3) | C10—C11—C12—C13 | 19.5 (3) |
C1—C2—C3—C4 | −1.5 (3) | C10—C11—C12—C19 | −160.15 (19) |
C2—C3—C4—C5 | 3.2 (3) | C19—C12—C13—N4 | −0.6 (3) |
C2—C3—C4—Cl1 | −175.50 (17) | C11—C12—C13—N4 | 179.7 (2) |
C3—C4—C5—C6 | −0.8 (3) | C14—N4—C13—C12 | 1.4 (3) |
Cl1—C4—C5—C6 | 177.92 (14) | C13—N4—C14—C15 | 179.1 (3) |
C4—C5—C6—C1 | −3.1 (3) | C13—N4—C14—C19 | −1.7 (3) |
C4—C5—C6—C7 | 176.6 (2) | N4—C14—C15—C16 | 179.2 (3) |
N1—C1—C6—C5 | −177.93 (17) | C19—C14—C15—C16 | 0.0 (4) |
C2—C1—C6—C5 | 4.8 (3) | C14—C15—C16—C17 | −0.9 (4) |
N1—C1—C6—C7 | 2.3 (2) | C15—C16—C17—C18 | 0.9 (4) |
C2—C1—C6—C7 | −174.9 (2) | C16—C17—C18—C19 | 0.1 (4) |
C5—C6—C7—C8 | 178.5 (2) | C17—C18—C19—C14 | −1.0 (3) |
C1—C6—C7—C8 | −1.8 (2) | C17—C18—C19—C12 | 179.4 (2) |
C5—C6—C7—C9 | −8.3 (4) | N4—C14—C19—C18 | −178.4 (2) |
C1—C6—C7—C9 | 171.4 (2) | C15—C14—C19—C18 | 0.9 (3) |
C1—N1—C8—C7 | 0.9 (3) | N4—C14—C19—C12 | 1.3 (3) |
C6—C7—C8—N1 | 0.6 (2) | C15—C14—C19—C12 | −179.4 (2) |
C9—C7—C8—N1 | −173.38 (19) | C13—C12—C19—C18 | 179.2 (2) |
N3—N2—C9—C7 | −175.66 (17) | C11—C12—C19—C18 | −1.1 (4) |
C8—C7—C9—N2 | −178.32 (19) | C13—C12—C19—C14 | −0.4 (2) |
C6—C7—C9—N2 | 9.5 (3) | C11—C12—C19—C14 | 179.3 (2) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O1i | 0.88 (1) | 2.02 (1) | 2.893 (2) | 174 (3) |
N3—H3N···O1ii | 0.88 (1) | 1.96 (1) | 2.827 (2) | 170 (4) |
Symmetry codes: (i) x+1/2, y+1/2, z; (ii) x, −y+1, z−1/2. |