


Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810000711/hb5277sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536810000711/hb5277Isup2.hkl |
CCDC reference: 764999
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean
(C-C) = 0.004 Å
- R factor = 0.044
- wR factor = 0.119
- Data-to-parameter ratio = 11.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.84 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Ueq(max)/Ueq(min) ... 3.11 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C13 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C14 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C12 PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.58 PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O5 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 2 PLAT927_ALERT_1_C Reported and Calculated wR2 * 100.0 Differ by . -0.27
Alert level G FORMU01_ALERT_1_G There is a discrepancy between the atom counts in the _chemical_formula_sum and _chemical_formula_moiety. This is usually due to the moiety formula being in the wrong format. Atom count from _chemical_formula_sum: C16 H22 Na2 O10 Atom count from _chemical_formula_moiety:C16 H22 Na2 O4 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 12 PLAT960_ALERT_3_G Number of Intensities with I .LT. - 2*sig(I) .. 2
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 9 ALERT level C = Check and explain 3 ALERT level G = General alerts; check 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 6 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level A PUBL024_ALERT_1_A The number of authors is greater than 5. Please specify the role of each of the co-authors for your paper.
Author Response: Each of the six authors has been involved in this study. |
1 ALERT level A = Data missing that is essential or data in wrong format 0 ALERT level G = General alerts. Data that may be required is missing
Sodium hydroxide (0.66 g, 0.0165 mmol) was dissolved in a mixture of distilled water (10 ml) and ethanol (8 ml). The solution was cooled to room temperature. Half of the mixture of vanillin (1 g, 0.00658 mmol) and acetone (0.19 g, 0.00329 mmol) added to the above solution and stirred at room temperature for 15 minute then the remaining mixture was added and stirred for 2 h under the same conditions. The greenish-yellow precipitate obtained was filtered and recystalized from methanol to yield colourless blocks of (I).
All H atoms bound to C atoms were refined using a riding model, with C—H = 0.93Å and Uiso(H) = 1.2Ueq(C) for aromatic C, and C—H = 0.96Å and Uiso(H) = 1.5Ueq(C) for methyl C atoms. Water H atom was located in difference maps and refined subject to a restraint of O—H = 0.83 (2) Å.
The crystal structures of vanillin-I (Velavan et al., 1995), the polymorphic forms of isovanillin (Iwasaki, 1973), o-vanillin (Iwasaki et al., 1976) and other vanillin derivatives (Usman et al., 2002; Li et al., 1999) have been reported. We now report the title compound, (I).
The basic polymeric fragment of (I), with asymmetric unit formula [Na2(H2O)2(C8H7O3)2]n, is illustrated in Fig. 1. The Na+ cations are of two coordination types. In the first of these coordination, the Na1 coordination by four O atoms from two equivalent water molecules (O1, O2, O1iv and O2iv) and the bonded carboxylate O atom from vanillin ligand (O6) (Table 1). In the second coordination, cation Na2 is coordinated by four O atoms from two equivalent water molecules (O1, O2, O1vii and O2vii) and two O atoms from vanillin ligand (O7vi and O8vi) [symmetry codes: (iv) x, 1/2 - y, z; (vi) 3/2 - x, -y, 1/2 + z; (vii) x, -1/2 - y, z]. The vanillin ligand five-membered (O7vi/C11vi/C12vi/O8vi/Na2) chelates to the Na atom through the methoxy and hydroxy groups. Two adjacent Na+ cations are linked together by two H2O bridges to form a four-membered ring with an Na2O2 core. The Na1···Na2 separation is 3.7595 (8) Å. Adjacent Na2O2 binuclear motifs are further joined by the vanillin ligand through carboxyl atoms O6, O7 and O8, to produce a one-dimensional chain along the c axis, with an Na1···Na2ii separation of 9.890Å [symmetry code: (ii) 3/2 - x, 1 - y, z - 1/2]; this compares with the corresponding Na···Na distance of 8.006 (3)Å in the three-dimensional Na-terephthalate polymer [Na2(C8H4O4)] (Kaduk, 2000). These chains are connected by the water O atoms [Na1···Na2v = 3.7595 (8) Å; symmetry code: (v) x, 1 + y, z], generating a two-dimensional layer architecture in the crystallographic bc plane (Fig. 2).
Water atom O1 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H1B, to atom O8i so forming a C(10)[R22(20)] (Bernstein et al., 1995) chain of rings running parallel to the [0–10] direction and centrosymmetric R22(20) rings centred at (1/2, 1/2+n/2, 1/2) (n = zero or integer). The combination of O1—H1B···O8i and O1ix—H1Bix···O8i hydrogen bonds produce R21(6) ring (Fig. 3). Water atom O2 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H2A, to atom O4ii, while O1ii acts as donor to O5ii, and in this manner a C22(12) chain running parallel to the [00–1] direction. The combination of O2—H2A···O4ii, O1ii—H1Aii···O5ii and O2ix—H2Aix···O4ii hydrogen bonds produce R21(6) and R22(20) rings (Fig. 4).
For related crystal structures, see: Velavan et al. (1995); Iwasaki (1973); Iwasaki et al. (1976); Usman et al. (2002); Li et al. (1999); Kaduk (2000). For graph-set notation, see: Bernstein et al. (1995).
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999) and SHELXL97 (Sheldrick, 2008).
[Na2(C8H7O3)(H2O)4](C8H7O3) | F(000) = 880 |
Mr = 420.32 | Dx = 1.488 Mg m−3 |
Orthorhombic, Pnma | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ac 2n | Cell parameters from 5113 reflections |
a = 12.2281 (6) Å | θ = 3.0–31.1° |
b = 6.7681 (3) Å | µ = 0.16 mm−1 |
c = 22.6734 (10) Å | T = 296 K |
V = 1876.47 (15) Å3 | Block, colourles |
Z = 4 | 0.42 × 0.33 × 0.24 mm |
Bruker APEXII CCD diffractometer | 2121 independent reflections |
Radiation source: fine-focus sealed tube | 1825 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
phi and ω scans | θmax = 26.5°, θmin = 2.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | h = −15→15 |
Tmin = 0.938, Tmax = 0.962 | k = −8→4 |
10469 measured reflections | l = −19→28 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.044 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.119 | w = 1/[σ2(Fo2) + (0.0476P)2 + 1.7283P] where P = (Fo2 + 2Fc2)/3 |
S = 1.07 | (Δ/σ)max = 0.001 |
2121 reflections | Δρmax = 0.63 e Å−3 |
180 parameters | Δρmin = −0.67 e Å−3 |
12 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0138 (14) |
[Na2(C8H7O3)(H2O)4](C8H7O3) | V = 1876.47 (15) Å3 |
Mr = 420.32 | Z = 4 |
Orthorhombic, Pnma | Mo Kα radiation |
a = 12.2281 (6) Å | µ = 0.16 mm−1 |
b = 6.7681 (3) Å | T = 296 K |
c = 22.6734 (10) Å | 0.42 × 0.33 × 0.24 mm |
Bruker APEXII CCD diffractometer | 2121 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2007) | 1825 reflections with I > 2σ(I) |
Tmin = 0.938, Tmax = 0.962 | Rint = 0.020 |
10469 measured reflections |
R[F2 > 2σ(F2)] = 0.044 | 12 restraints |
wR(F2) = 0.119 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.07 | Δρmax = 0.63 e Å−3 |
2121 reflections | Δρmin = −0.67 e Å−3 |
180 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
C1 | 0.6494 (2) | 0.7500 | 0.97772 (12) | 0.0327 (7) | |
C2 | 0.7164 (2) | 0.7500 | 0.92725 (13) | 0.0321 (7) | |
H2 | 0.7920 | 0.7500 | 0.9315 | 0.039* | |
C3 | 0.6713 (2) | 0.7500 | 0.87213 (12) | 0.0263 (6) | |
C4 | 0.5554 (2) | 0.7500 | 0.86488 (12) | 0.0260 (6) | |
C5 | 0.4908 (2) | 0.7500 | 0.91595 (13) | 0.0317 (7) | |
H5 | 0.4151 | 0.7500 | 0.9123 | 0.038* | |
C6 | 0.5368 (2) | 0.7500 | 0.97117 (13) | 0.0331 (7) | |
H6 | 0.4921 | 0.7500 | 1.0044 | 0.040* | |
C7 | 0.6978 (3) | 0.7500 | 1.03533 (14) | 0.0505 (10) | |
H7 | 0.7738 | 0.7500 | 1.0370 | 0.061* | |
C8 | 0.8444 (2) | 0.7500 | 0.82464 (14) | 0.0345 (7) | |
H8A | 0.8757 | 0.7214 | 0.7868 | 0.052* | 0.50 |
H8B | 0.8669 | 0.6512 | 0.8525 | 0.052* | 0.50 |
H8C | 0.8689 | 0.8774 | 0.8377 | 0.052* | 0.50 |
C9 | 0.6086 (3) | 0.7500 | 0.49146 (15) | 0.0582 (12) | |
C10 | 0.7012 (2) | 0.7500 | 0.45577 (13) | 0.0318 (7) | |
H10 | 0.7704 | 0.7500 | 0.4728 | 0.038* | |
C11 | 0.6907 (2) | 0.7500 | 0.39567 (12) | 0.0258 (6) | |
C12 | 0.5862 (2) | 0.7500 | 0.36734 (13) | 0.0336 (7) | |
C13 | 0.4958 (3) | 0.7500 | 0.40446 (17) | 0.092 (2) | |
H13 | 0.4260 | 0.7500 | 0.3882 | 0.111* | |
C14 | 0.5076 (3) | 0.7500 | 0.46474 (18) | 0.099 (2) | |
H14 | 0.4452 | 0.7500 | 0.4882 | 0.118* | |
C15 | 0.6143 (3) | 0.7500 | 0.55467 (17) | 0.0725 (15) | |
H15 | 0.5477 | 0.7500 | 0.5745 | 0.087* | |
C16 | 0.8841 (2) | 0.7500 | 0.38079 (14) | 0.0364 (7) | |
H16A | 0.8962 | 0.8710 | 0.4019 | 0.055* | 0.50 |
H16B | 0.9364 | 0.7389 | 0.3494 | 0.055* | 0.50 |
H16C | 0.8922 | 0.6401 | 0.4072 | 0.055* | 0.50 |
O1 | 0.59561 (12) | 0.4859 (3) | 0.73010 (7) | 0.0386 (4) | |
H1A | 0.5721 (19) | 0.552 (4) | 0.7574 (10) | 0.047 (8)* | |
H1B | 0.5423 (18) | 0.426 (4) | 0.7162 (11) | 0.060 (9)* | |
O2 | 0.83431 (12) | 0.4956 (3) | 0.68524 (7) | 0.0353 (4) | |
H2A | 0.835 (2) | 0.439 (4) | 0.6534 (9) | 0.047 (8)* | |
H2B | 0.8935 (17) | 0.557 (4) | 0.6870 (11) | 0.051 (8)* | |
O3 | 0.72906 (16) | 0.7500 | 0.82013 (9) | 0.0352 (5) | |
O4 | 0.6492 (2) | 0.7500 | 1.08231 (10) | 0.0528 (7) | |
O5 | 0.51190 (16) | 0.7500 | 0.81191 (8) | 0.0319 (5) | |
O6 | 0.6945 (2) | 0.7500 | 0.58503 (11) | 0.0611 (8) | |
O7 | 0.77607 (16) | 0.7500 | 0.35679 (9) | 0.0367 (5) | |
O8 | 0.57840 (16) | 0.7500 | 0.31048 (8) | 0.0325 (5) | |
Na1 | 0.69720 (10) | 0.7500 | 0.68819 (5) | 0.0353 (3) | |
Na2 | 0.75745 (10) | 0.2500 | 0.75268 (5) | 0.0343 (3) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0341 (15) | 0.0405 (18) | 0.0234 (14) | 0.000 | −0.0004 (11) | 0.000 |
C2 | 0.0253 (13) | 0.0429 (18) | 0.0282 (14) | 0.000 | −0.0014 (11) | 0.000 |
C3 | 0.0260 (13) | 0.0284 (15) | 0.0245 (13) | 0.000 | 0.0031 (10) | 0.000 |
C4 | 0.0265 (13) | 0.0271 (15) | 0.0245 (13) | 0.000 | −0.0018 (10) | 0.000 |
C5 | 0.0241 (13) | 0.0400 (17) | 0.0309 (15) | 0.000 | 0.0014 (11) | 0.000 |
C6 | 0.0322 (14) | 0.0404 (18) | 0.0268 (14) | 0.000 | 0.0053 (11) | 0.000 |
C7 | 0.0400 (17) | 0.084 (3) | 0.0279 (16) | 0.000 | −0.0038 (13) | 0.000 |
C8 | 0.0274 (14) | 0.0409 (18) | 0.0352 (16) | 0.000 | 0.0065 (12) | 0.000 |
C9 | 0.0366 (17) | 0.110 (4) | 0.0276 (17) | 0.000 | 0.0020 (13) | 0.000 |
C10 | 0.0299 (14) | 0.0375 (17) | 0.0281 (14) | 0.000 | −0.0045 (11) | 0.000 |
C11 | 0.0268 (13) | 0.0240 (14) | 0.0267 (13) | 0.000 | 0.0007 (10) | 0.000 |
C12 | 0.0295 (14) | 0.0457 (19) | 0.0256 (14) | 0.000 | −0.0029 (11) | 0.000 |
C13 | 0.0249 (16) | 0.219 (7) | 0.0333 (18) | 0.000 | −0.0012 (14) | 0.000 |
C14 | 0.0368 (19) | 0.218 (6) | 0.041 (2) | 0.000 | 0.0087 (17) | 0.000 |
C15 | 0.047 (2) | 0.138 (5) | 0.0322 (19) | 0.000 | 0.0065 (16) | 0.000 |
C16 | 0.0245 (13) | 0.0486 (19) | 0.0363 (16) | 0.000 | −0.0056 (12) | 0.000 |
O1 | 0.0325 (8) | 0.0420 (10) | 0.0413 (9) | −0.0063 (7) | 0.0053 (7) | −0.0109 (8) |
O2 | 0.0347 (8) | 0.0402 (9) | 0.0311 (8) | −0.0032 (7) | 0.0039 (6) | −0.0014 (7) |
O3 | 0.0256 (10) | 0.0557 (15) | 0.0243 (10) | 0.000 | 0.0028 (8) | 0.000 |
O4 | 0.0623 (16) | 0.0727 (19) | 0.0233 (11) | 0.000 | −0.0007 (10) | 0.000 |
O5 | 0.0266 (9) | 0.0442 (13) | 0.0249 (10) | 0.000 | −0.0030 (8) | 0.000 |
O6 | 0.0559 (16) | 0.099 (2) | 0.0287 (12) | 0.000 | −0.0051 (11) | 0.000 |
O7 | 0.0243 (10) | 0.0597 (15) | 0.0262 (10) | 0.000 | −0.0024 (8) | 0.000 |
O8 | 0.0291 (10) | 0.0442 (13) | 0.0242 (10) | 0.000 | −0.0039 (8) | 0.000 |
Na1 | 0.0336 (6) | 0.0352 (7) | 0.0371 (7) | 0.000 | 0.0020 (5) | 0.000 |
Na2 | 0.0337 (6) | 0.0422 (7) | 0.0272 (6) | 0.000 | 0.0001 (5) | 0.000 |
C1—C6 | 1.385 (4) | C12—C13 | 1.390 (5) |
C1—C2 | 1.407 (4) | C13—C14 | 1.374 (6) |
C1—C7 | 1.434 (4) | C13—H13 | 0.9300 |
C2—C3 | 1.366 (4) | C14—H14 | 0.9300 |
C2—H2 | 0.9300 | C15—O6 | 1.198 (5) |
C3—O3 | 1.374 (3) | C15—H15 | 0.9300 |
C3—C4 | 1.427 (4) | C16—O7 | 1.428 (3) |
C4—O5 | 1.314 (3) | C16—H16A | 0.9600 |
C4—C5 | 1.402 (4) | C16—H16B | 0.9600 |
C5—C6 | 1.372 (4) | C16—H16C | 0.9600 |
C5—H5 | 0.9300 | O1—H1A | 0.817 (17) |
C6—H6 | 0.9300 | O1—H1B | 0.830 (17) |
C7—O4 | 1.220 (4) | O2—H2A | 0.816 (17) |
C7—H7 | 0.9300 | O2—H2B | 0.836 (17) |
C8—O3 | 1.414 (3) | Na1—O1 | 2.3751 (18) |
C8—H8A | 0.9600 | Na1—O2 | 2.4043 (18) |
C8—H8B | 0.9600 | Na1—O6 | 2.339 (3) |
C8—H8C | 0.9600 | Na1—O1i | 2.3751 (18) |
C9—C14 | 1.376 (5) | Na1—O2i | 2.4043 (18) |
C9—C10 | 1.391 (4) | Na2—O1 | 2.5938 (19) |
C9—C15 | 1.435 (5) | Na2—O2 | 2.4462 (18) |
C10—C11 | 1.369 (4) | Na2—O2ii | 2.4462 (18) |
C10—H10 | 0.9300 | Na2—O1ii | 2.5938 (19) |
C11—O7 | 1.366 (3) | Na2—O7iii | 2.396 (2) |
C11—C12 | 1.430 (4) | Na2—O8iii | 2.397 (2) |
C12—O8 | 1.293 (3) | ||
C6—C1—C2 | 119.4 (3) | H16A—C16—H16C | 109.5 |
C6—C1—C7 | 120.6 (3) | H16B—C16—H16C | 109.5 |
C2—C1—C7 | 120.0 (3) | Na1—O1—Na2 | 98.23 (6) |
C3—C2—C1 | 120.6 (3) | Na1—O1—H1A | 94.3 (19) |
C3—C2—H2 | 119.7 | Na2—O1—H1A | 117.2 (19) |
C1—C2—H2 | 119.7 | Na1—O1—H1B | 129 (2) |
C2—C3—O3 | 125.3 (2) | Na2—O1—H1B | 112 (2) |
C2—C3—C4 | 120.4 (2) | H1A—O1—H1B | 106 (2) |
O3—C3—C4 | 114.3 (2) | Na1—O2—Na2 | 101.61 (6) |
O5—C4—C5 | 121.8 (2) | Na1—O2—H2A | 111.6 (19) |
O5—C4—C3 | 120.5 (2) | Na2—O2—H2A | 104.0 (19) |
C5—C4—C3 | 117.7 (2) | Na1—O2—H2B | 104.2 (19) |
C6—C5—C4 | 121.5 (3) | Na2—O2—H2B | 129.9 (19) |
C6—C5—H5 | 119.2 | H2A—O2—H2B | 105 (2) |
C4—C5—H5 | 119.2 | C3—O3—C8 | 116.8 (2) |
C5—C6—C1 | 120.3 (3) | C3—O3—Na1 | 141.66 (16) |
C5—C6—H6 | 119.8 | C8—O3—Na1 | 101.57 (16) |
C1—C6—H6 | 119.8 | C15—O6—Na1 | 125.9 (3) |
O4—C7—C1 | 126.4 (3) | C11—O7—C16 | 117.4 (2) |
O4—C7—H7 | 116.8 | C11—O7—Na2iv | 120.33 (16) |
C1—C7—H7 | 116.8 | C16—O7—Na2iv | 122.24 (17) |
O3—C8—H8A | 109.5 | C12—O8—Na2iv | 118.88 (18) |
O3—C8—H8B | 109.5 | O6—Na1—O1i | 113.13 (7) |
H8A—C8—H8B | 109.5 | O6—Na1—O1 | 113.13 (7) |
O3—C8—H8C | 109.5 | O1i—Na1—O1 | 97.63 (9) |
H8A—C8—H8C | 109.5 | O6—Na1—O2i | 88.96 (7) |
H8B—C8—H8C | 109.5 | O1i—Na1—O2i | 80.61 (6) |
C14—C9—C10 | 118.3 (3) | O1—Na1—O2i | 156.19 (8) |
C14—C9—C15 | 118.9 (4) | O6—Na1—O2 | 88.96 (7) |
C10—C9—C15 | 122.8 (3) | O1i—Na1—O2 | 156.19 (8) |
C11—C10—C9 | 120.2 (3) | O1—Na1—O2 | 80.61 (5) |
C11—C10—H10 | 119.9 | O2i—Na1—O2 | 91.48 (9) |
C9—C10—H10 | 119.9 | O6—Na1—O3 | 173.38 (9) |
O7—C11—C10 | 124.8 (3) | O1i—Na1—O3 | 70.78 (5) |
O7—C11—C12 | 113.1 (2) | O1—Na1—O3 | 70.78 (5) |
C10—C11—C12 | 122.1 (3) | O2i—Na1—O3 | 86.42 (5) |
O8—C12—C13 | 123.0 (3) | O2—Na1—O3 | 86.42 (5) |
O8—C12—C11 | 120.9 (3) | O7iii—Na2—O8iii | 66.71 (7) |
C13—C12—C11 | 116.0 (3) | O7iii—Na2—O2ii | 132.97 (5) |
C14—C13—C12 | 121.3 (3) | O8iii—Na2—O2ii | 91.15 (6) |
C14—C13—H13 | 119.4 | O7iii—Na2—O2 | 132.97 (5) |
C12—C13—H13 | 119.4 | O8iii—Na2—O2 | 91.15 (6) |
C13—C14—C9 | 122.1 (4) | O2ii—Na2—O2 | 85.60 (9) |
C13—C14—H14 | 118.9 | O7iii—Na2—O1ii | 93.66 (6) |
C9—C14—H14 | 118.9 | O8iii—Na2—O1ii | 138.31 (5) |
O6—C15—C9 | 127.8 (4) | O2ii—Na2—O1ii | 75.61 (6) |
O6—C15—H15 | 116.1 | O2—Na2—O1ii | 126.01 (7) |
C9—C15—H15 | 116.1 | O7iii—Na2—O1 | 93.66 (6) |
O7—C16—H16A | 109.5 | O8iii—Na2—O1 | 138.31 (5) |
O7—C16—H16B | 109.5 | O2ii—Na2—O1 | 126.01 (7) |
H16A—C16—H16B | 109.5 | O2—Na2—O1 | 75.61 (5) |
O7—C16—H16C | 109.5 | O1ii—Na2—O1 | 75.98 (8) |
C6—C1—C2—C3 | 0.000 (2) | C10—C11—O7—Na2iv | 180.0 |
C7—C1—C2—C3 | 180.000 (1) | C12—C11—O7—Na2iv | 0.0 |
C1—C2—C3—O3 | 180.000 (1) | C13—C12—O8—Na2iv | 180.0 |
C1—C2—C3—C4 | 0.000 (1) | C11—C12—O8—Na2iv | 0.0 |
C2—C3—C4—O5 | 180.000 (1) | C15—O6—Na1—O1i | −54.92 (6) |
O3—C3—C4—O5 | 0.000 (1) | C15—O6—Na1—O1 | 54.92 (6) |
C2—C3—C4—C5 | 0.000 (1) | C15—O6—Na1—O2i | −134.25 (4) |
O3—C3—C4—C5 | 180.000 (1) | C15—O6—Na1—O2 | 134.25 (4) |
O5—C4—C5—C6 | 180.000 (1) | Na2—O1—Na1—O6 | 99.60 (9) |
C3—C4—C5—C6 | 0.000 (2) | Na2—O1—Na1—O1i | −141.19 (5) |
C4—C5—C6—C1 | 0.000 (2) | Na2—O1—Na1—O2i | −57.16 (18) |
C2—C1—C6—C5 | 0.000 (2) | Na2—O1—Na1—O2 | 14.80 (6) |
C7—C1—C6—C5 | 180.000 (1) | Na2—O1—Na1—O3 | −74.67 (6) |
C6—C1—C7—O4 | 0.000 (2) | Na2—O2—Na1—O6 | −129.53 (7) |
C2—C1—C7—O4 | 180.000 (2) | Na2—O2—Na1—O1i | 71.75 (18) |
C14—C9—C10—C11 | 0.0 | Na2—O2—Na1—O1 | −15.88 (7) |
C15—C9—C10—C11 | 180.0 | Na2—O2—Na1—O2i | 141.54 (5) |
C9—C10—C11—O7 | 180.0 | Na2—O2—Na1—O3 | 55.22 (6) |
C9—C10—C11—C12 | 0.0 | C3—O3—Na1—O1i | 52.85 (5) |
O7—C11—C12—O8 | 0.0 | C8—O3—Na1—O1i | −127.15 (5) |
C10—C11—C12—O8 | 180.0 | C3—O3—Na1—O1 | −52.85 (5) |
O7—C11—C12—C13 | 180.0 | C8—O3—Na1—O1 | 127.15 (5) |
C10—C11—C12—C13 | 0.0 | C3—O3—Na1—O2i | 134.14 (4) |
O8—C12—C13—C14 | 180.0 | C8—O3—Na1—O2i | −45.86 (4) |
C11—C12—C13—C14 | 0.0 | C3—O3—Na1—O2 | −134.14 (4) |
C12—C13—C14—C9 | 0.000 (1) | C8—O3—Na1—O2 | 45.86 (4) |
C10—C9—C14—C13 | 0.000 (1) | Na1—O2—Na2—O7iii | −66.66 (11) |
C15—C9—C14—C13 | 180.0 | Na1—O2—Na2—O8iii | −125.21 (6) |
C14—C9—C15—O6 | 180.0 | Na1—O2—Na2—O2ii | 143.73 (5) |
C10—C9—C15—O6 | 0.000 (1) | Na1—O2—Na2—O1ii | 75.08 (9) |
C2—C3—O3—C8 | 0.000 (1) | Na1—O2—Na2—O1 | 14.79 (6) |
C4—C3—O3—C8 | 180.000 (1) | Na1—O1—Na2—O7iii | 118.71 (6) |
C2—C3—O3—Na1 | 180.000 (1) | Na1—O1—Na2—O8iii | 60.30 (12) |
C4—C3—O3—Na1 | 0.000 (1) | Na1—O1—Na2—O2ii | −88.29 (9) |
C9—C15—O6—Na1 | 180.0 | Na1—O1—Na2—O2 | −14.81 (6) |
C10—C11—O7—C16 | 0.0 | Na1—O1—Na2—O1ii | −148.42 (4) |
C12—C11—O7—C16 | 180.0 |
Symmetry codes: (i) x, −y+3/2, z; (ii) x, −y+1/2, z; (iii) −x+3/2, −y+1, z+1/2; (iv) −x+3/2, −y+1, z−1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O5 | 0.82 (2) | 1.97 (2) | 2.772 (2) | 169 (3) |
O1—H1B···O8v | 0.83 (2) | 1.99 (2) | 2.815 (2) | 172 (3) |
O2—H2A···O4iv | 0.82 (2) | 2.07 (2) | 2.872 (2) | 168 (3) |
O2—H2B···O5vi | 0.84 (2) | 1.95 (2) | 2.772 (2) | 168 (3) |
Symmetry codes: (iv) −x+3/2, −y+1, z−1/2; (v) −x+1, −y+1, −z+1; (vi) x+1/2, y, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | [Na2(C8H7O3)(H2O)4](C8H7O3) |
Mr | 420.32 |
Crystal system, space group | Orthorhombic, Pnma |
Temperature (K) | 296 |
a, b, c (Å) | 12.2281 (6), 6.7681 (3), 22.6734 (10) |
V (Å3) | 1876.47 (15) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.16 |
Crystal size (mm) | 0.42 × 0.33 × 0.24 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Bruker, 2007) |
Tmin, Tmax | 0.938, 0.962 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10469, 2121, 1825 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.628 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.044, 0.119, 1.07 |
No. of reflections | 2121 |
No. of parameters | 180 |
No. of restraints | 12 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.63, −0.67 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), WinGX (Farrugia, 1999) and SHELXL97 (Sheldrick, 2008).
Na1—O1 | 2.3751 (18) | Na2—O2 | 2.4462 (18) |
Na1—O2 | 2.4043 (18) | Na2—O7i | 2.396 (2) |
Na1—O6 | 2.339 (3) | Na2—O8i | 2.397 (2) |
Na2—O1 | 2.5938 (19) | ||
O7i—Na2—O1 | 93.66 (6) | O2—Na2—O1 | 75.61 (5) |
O8i—Na2—O1 | 138.31 (5) | O1ii—Na2—O1 | 75.98 (8) |
O2ii—Na2—O1 | 126.01 (7) |
Symmetry codes: (i) −x+3/2, −y+1, z+1/2; (ii) x, −y+1/2, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O5 | 0.817 (17) | 1.965 (17) | 2.772 (2) | 169 (3) |
O1—H1B···O8iii | 0.830 (17) | 1.991 (17) | 2.815 (2) | 172 (3) |
O2—H2A···O4iv | 0.816 (17) | 2.069 (18) | 2.872 (2) | 168 (3) |
O2—H2B···O5v | 0.836 (17) | 1.950 (18) | 2.772 (2) | 168 (3) |
Symmetry codes: (iii) −x+1, −y+1, −z+1; (iv) −x+3/2, −y+1, z−1/2; (v) x+1/2, y, −z+3/2. |
The crystal structures of vanillin-I (Velavan et al., 1995), the polymorphic forms of isovanillin (Iwasaki, 1973), o-vanillin (Iwasaki et al., 1976) and other vanillin derivatives (Usman et al., 2002; Li et al., 1999) have been reported. We now report the title compound, (I).
The basic polymeric fragment of (I), with asymmetric unit formula [Na2(H2O)2(C8H7O3)2]n, is illustrated in Fig. 1. The Na+ cations are of two coordination types. In the first of these coordination, the Na1 coordination by four O atoms from two equivalent water molecules (O1, O2, O1iv and O2iv) and the bonded carboxylate O atom from vanillin ligand (O6) (Table 1). In the second coordination, cation Na2 is coordinated by four O atoms from two equivalent water molecules (O1, O2, O1vii and O2vii) and two O atoms from vanillin ligand (O7vi and O8vi) [symmetry codes: (iv) x, 1/2 - y, z; (vi) 3/2 - x, -y, 1/2 + z; (vii) x, -1/2 - y, z]. The vanillin ligand five-membered (O7vi/C11vi/C12vi/O8vi/Na2) chelates to the Na atom through the methoxy and hydroxy groups. Two adjacent Na+ cations are linked together by two H2O bridges to form a four-membered ring with an Na2O2 core. The Na1···Na2 separation is 3.7595 (8) Å. Adjacent Na2O2 binuclear motifs are further joined by the vanillin ligand through carboxyl atoms O6, O7 and O8, to produce a one-dimensional chain along the c axis, with an Na1···Na2ii separation of 9.890Å [symmetry code: (ii) 3/2 - x, 1 - y, z - 1/2]; this compares with the corresponding Na···Na distance of 8.006 (3)Å in the three-dimensional Na-terephthalate polymer [Na2(C8H4O4)] (Kaduk, 2000). These chains are connected by the water O atoms [Na1···Na2v = 3.7595 (8) Å; symmetry code: (v) x, 1 + y, z], generating a two-dimensional layer architecture in the crystallographic bc plane (Fig. 2).
Water atom O1 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H1B, to atom O8i so forming a C(10)[R22(20)] (Bernstein et al., 1995) chain of rings running parallel to the [0–10] direction and centrosymmetric R22(20) rings centred at (1/2, 1/2+n/2, 1/2) (n = zero or integer). The combination of O1—H1B···O8i and O1ix—H1Bix···O8i hydrogen bonds produce R21(6) ring (Fig. 3). Water atom O2 in the molecule at (x, y, z) acts as a hydrogen-bond donor, via H2A, to atom O4ii, while O1ii acts as donor to O5ii, and in this manner a C22(12) chain running parallel to the [00–1] direction. The combination of O2—H2A···O4ii, O1ii—H1Aii···O5ii and O2ix—H2Aix···O4ii hydrogen bonds produce R21(6) and R22(20) rings (Fig. 4).