



Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810004095/hb5322sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536810004095/hb5322Isup2.hkl |
CCDC reference: 769953
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.045
- wR factor = 0.125
- Data-to-parameter ratio = 20.2
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C19 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 2 PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 26
Alert level G PLAT793_ALERT_4_G The Model has Chirality at C1 (Verify) .... R PLAT793_ALERT_4_G The Model has Chirality at C2 (Verify) .... S PLAT793_ALERT_4_G The Model has Chirality at C6 (Verify) .... R PLAT793_ALERT_4_G The Model has Chirality at C7 (Verify) .... R
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 5 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The 1-methyl-2,4-bis(4-chlorophenyl)-3-azabicyclo[3.3.1]nonan-9-one was synthesized by a modified Mannich reaction in one-pot, using para-chlorobenzaldehyde (0.1 mol, 14.06 g), 2-methylcyclohexanone (0.05 mol, 5.61 g/6.07 ml) and ammonium acetate (0.075 mol, 5.78 g) in 50 ml of absolute ethanol. The mixture was gently warmed on a hot plate with stirring and continued at 303-308 K (30-35° C) till completion of the reaction. The progress was monitered by TLC. After all starting material was used up, the crude 3-azabicyclononan-9-one was separated by filtration and washed with a 1:5 ethanol-ether mixture, till the solid becomes colorless. Colourless blocks of (I) were obtained by slow evoporation from ethanol.
The nitrogen H atom was located in a difference Fourier map and refined isotropically. Other hydrogen atoms were fixed geometrically and allowed to ride on the parent carbon atoms with aromatic C—H = 0.93 Å, methylene C—H = 0.97 Å, methine C—H = 0.98 Å and methyl C—H = 0.96 Å . The displacement parameters were set for phenyl, methylene and aliphatic H atoms at Uiso(H) = 1.2Ueq(C) and for methyl H atoms atUiso(H) = 1.5Ueq(C)
Data collection: APEX2 (Bruker, 2004); cell refinement: APEX2 and SAINT-Plus (Bruker, 2004); data reduction: SAINT-Plus and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2006); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
![]() | Fig. 1. The molecular structure of (I) with atoms represented with 30% probability ellipsoids. |
![]() | Fig. 2. Packing diagram for (I) showing the N—H···O and Cl···Cl interactions. |
C21H21Cl2NO | F(000) = 1568 |
Mr = 374.29 | Dx = 1.312 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 7359 reflections |
a = 28.4515 (14) Å | θ = 2.5–27.3° |
b = 7.0380 (3) Å | µ = 0.35 mm−1 |
c = 21.2771 (12) Å | T = 298 K |
β = 117.148 (4)° | Rectangular block, colourless |
V = 3791.2 (3) Å3 | 0.58 × 0.42 × 0.18 mm |
Z = 8 |
Bruker APEXII CCD diffractometer | 4661 independent reflections |
Radiation source: fine-focus sealed tube | 3149 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
phi and ω scans | θmax = 28.2°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 1999) | h = −36→37 |
Tmin = 0.822, Tmax = 0.940 | k = −8→9 |
24985 measured reflections | l = −28→27 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.125 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0487P)2 + 3.2087P] where P = (Fo2 + 2Fc2)/3 |
4661 reflections | (Δ/σ)max = 0.001 |
231 parameters | Δρmax = 0.36 e Å−3 |
0 restraints | Δρmin = −0.43 e Å−3 |
C21H21Cl2NO | V = 3791.2 (3) Å3 |
Mr = 374.29 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 28.4515 (14) Å | µ = 0.35 mm−1 |
b = 7.0380 (3) Å | T = 298 K |
c = 21.2771 (12) Å | 0.58 × 0.42 × 0.18 mm |
β = 117.148 (4)° |
Bruker APEXII CCD diffractometer | 4661 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1999) | 3149 reflections with I > 2σ(I) |
Tmin = 0.822, Tmax = 0.940 | Rint = 0.033 |
24985 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.125 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.02 | Δρmax = 0.36 e Å−3 |
4661 reflections | Δρmin = −0.43 e Å−3 |
231 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.17656 (7) | 0.4818 (2) | 0.98420 (9) | 0.0357 (4) | |
H1 | 0.2131 | 0.4889 | 0.9916 | 0.043* | |
C2 | 0.15724 (7) | 0.6894 (2) | 0.98539 (10) | 0.0393 (4) | |
C3 | 0.09894 (8) | 0.7068 (3) | 0.97191 (11) | 0.0501 (5) | |
H3A | 0.0949 | 0.6354 | 1.0082 | 0.060* | |
H3B | 0.0919 | 0.8391 | 0.9772 | 0.060* | |
C4 | 0.05740 (8) | 0.6377 (3) | 0.90001 (12) | 0.0556 (5) | |
H4A | 0.0228 | 0.6790 | 0.8929 | 0.067* | |
H4B | 0.0575 | 0.4999 | 0.8993 | 0.067* | |
C5 | 0.06735 (8) | 0.7126 (3) | 0.83970 (11) | 0.0559 (5) | |
H5A | 0.0564 | 0.8446 | 0.8311 | 0.067* | |
H5B | 0.0456 | 0.6416 | 0.7972 | 0.067* | |
C6 | 0.12516 (8) | 0.6988 (3) | 0.85398 (10) | 0.0450 (4) | |
H6 | 0.1292 | 0.7694 | 0.8171 | 0.054* | |
C7 | 0.14595 (7) | 0.4935 (2) | 0.85650 (9) | 0.0395 (4) | |
H7 | 0.1826 | 0.5010 | 0.8644 | 0.047* | |
C8 | 0.15846 (7) | 0.7924 (2) | 0.92360 (10) | 0.0413 (4) | |
C9 | 0.17610 (7) | 0.3620 (2) | 1.04297 (9) | 0.0376 (4) | |
C10 | 0.22206 (8) | 0.3354 (3) | 1.10561 (10) | 0.0478 (5) | |
H10 | 0.2537 | 0.3846 | 1.1099 | 0.057* | |
C11 | 0.22168 (9) | 0.2369 (3) | 1.16196 (10) | 0.0537 (5) | |
H11 | 0.2528 | 0.2196 | 1.2035 | 0.064* | |
C12 | 0.17493 (9) | 0.1654 (3) | 1.15562 (10) | 0.0487 (5) | |
C13 | 0.12899 (8) | 0.1845 (3) | 1.09386 (11) | 0.0504 (5) | |
H13 | 0.0976 | 0.1325 | 1.0897 | 0.061* | |
C14 | 0.12984 (7) | 0.2817 (3) | 1.03794 (10) | 0.0443 (4) | |
H14 | 0.0988 | 0.2938 | 0.9960 | 0.053* | |
C15 | 0.19367 (9) | 0.7841 (3) | 1.05543 (11) | 0.0562 (5) | |
H15A | 0.2298 | 0.7607 | 1.0662 | 0.084* | |
H15B | 0.1869 | 0.7328 | 1.0923 | 0.084* | |
H15C | 0.1872 | 0.9186 | 1.0519 | 0.084* | |
C16 | 0.11369 (7) | 0.3942 (3) | 0.78664 (10) | 0.0426 (4) | |
C17 | 0.11848 (10) | 0.4523 (3) | 0.72767 (12) | 0.0616 (6) | |
H17 | 0.1433 | 0.5445 | 0.7324 | 0.074* | |
C18 | 0.08692 (11) | 0.3752 (4) | 0.66173 (12) | 0.0692 (7) | |
H18 | 0.0898 | 0.4179 | 0.6222 | 0.083* | |
C19 | 0.05165 (8) | 0.2361 (3) | 0.65530 (10) | 0.0542 (5) | |
C20 | 0.04760 (9) | 0.1701 (4) | 0.71289 (12) | 0.0633 (6) | |
H20 | 0.0243 | 0.0719 | 0.7082 | 0.076* | |
C21 | 0.07852 (9) | 0.2507 (3) | 0.77862 (11) | 0.0571 (5) | |
H21 | 0.0754 | 0.2070 | 0.8178 | 0.068* | |
Cl1 | 0.17372 (3) | 0.04670 (9) | 1.22681 (3) | 0.0770 (2) | |
Cl2 | 0.01186 (2) | 0.13710 (11) | 0.57245 (3) | 0.0829 (2) | |
N1 | 0.14499 (6) | 0.3905 (2) | 0.91547 (8) | 0.0379 (3) | |
O1 | 0.18212 (6) | 0.94051 (19) | 0.92903 (8) | 0.0570 (4) | |
H1A | 0.1580 (8) | 0.278 (3) | 0.9181 (11) | 0.050 (6)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0365 (9) | 0.0322 (8) | 0.0378 (9) | −0.0037 (7) | 0.0163 (7) | −0.0053 (7) |
C2 | 0.0433 (10) | 0.0310 (8) | 0.0429 (10) | −0.0022 (7) | 0.0190 (8) | −0.0065 (7) |
C3 | 0.0534 (11) | 0.0426 (10) | 0.0625 (13) | 0.0049 (9) | 0.0335 (10) | −0.0002 (9) |
C4 | 0.0380 (10) | 0.0519 (12) | 0.0729 (15) | 0.0024 (9) | 0.0218 (10) | 0.0035 (10) |
C5 | 0.0498 (11) | 0.0484 (11) | 0.0540 (12) | 0.0071 (9) | 0.0103 (10) | 0.0044 (10) |
C6 | 0.0557 (11) | 0.0341 (9) | 0.0436 (10) | −0.0041 (8) | 0.0212 (9) | 0.0039 (8) |
C7 | 0.0442 (10) | 0.0363 (9) | 0.0395 (9) | −0.0073 (7) | 0.0204 (8) | −0.0038 (7) |
C8 | 0.0413 (9) | 0.0289 (8) | 0.0556 (11) | 0.0005 (7) | 0.0239 (9) | −0.0021 (8) |
C9 | 0.0425 (9) | 0.0316 (8) | 0.0358 (9) | −0.0020 (7) | 0.0153 (8) | −0.0045 (7) |
C10 | 0.0442 (10) | 0.0454 (10) | 0.0447 (11) | −0.0050 (8) | 0.0123 (9) | −0.0015 (8) |
C11 | 0.0578 (12) | 0.0486 (11) | 0.0391 (10) | −0.0002 (9) | 0.0086 (9) | 0.0007 (9) |
C12 | 0.0700 (13) | 0.0355 (9) | 0.0435 (11) | 0.0047 (9) | 0.0286 (10) | 0.0030 (8) |
C13 | 0.0528 (11) | 0.0438 (10) | 0.0589 (12) | −0.0018 (9) | 0.0292 (10) | 0.0052 (9) |
C14 | 0.0428 (10) | 0.0417 (10) | 0.0425 (10) | −0.0033 (8) | 0.0143 (8) | 0.0022 (8) |
C15 | 0.0680 (13) | 0.0418 (10) | 0.0543 (12) | −0.0053 (10) | 0.0240 (11) | −0.0157 (9) |
C16 | 0.0498 (10) | 0.0395 (9) | 0.0400 (10) | −0.0036 (8) | 0.0219 (8) | −0.0034 (8) |
C17 | 0.0870 (16) | 0.0565 (13) | 0.0506 (12) | −0.0205 (12) | 0.0395 (12) | −0.0065 (10) |
C18 | 0.1041 (19) | 0.0679 (15) | 0.0417 (12) | −0.0056 (14) | 0.0385 (13) | −0.0044 (11) |
C19 | 0.0510 (11) | 0.0640 (13) | 0.0403 (11) | 0.0042 (10) | 0.0146 (9) | −0.0157 (10) |
C20 | 0.0584 (13) | 0.0781 (16) | 0.0545 (13) | −0.0249 (12) | 0.0268 (11) | −0.0228 (12) |
C21 | 0.0655 (13) | 0.0656 (13) | 0.0428 (11) | −0.0235 (11) | 0.0270 (10) | −0.0106 (10) |
Cl1 | 0.1104 (5) | 0.0655 (4) | 0.0658 (4) | 0.0146 (3) | 0.0494 (4) | 0.0240 (3) |
Cl2 | 0.0677 (4) | 0.1129 (6) | 0.0483 (3) | 0.0084 (4) | 0.0094 (3) | −0.0332 (3) |
N1 | 0.0474 (9) | 0.0284 (7) | 0.0358 (8) | −0.0031 (6) | 0.0170 (7) | −0.0040 (6) |
O1 | 0.0632 (9) | 0.0357 (7) | 0.0738 (10) | −0.0121 (6) | 0.0328 (8) | −0.0032 (7) |
C1—N1 | 1.469 (2) | C10—C11 | 1.389 (3) |
C1—C9 | 1.513 (2) | C10—H10 | 0.9300 |
C1—C2 | 1.565 (2) | C11—C12 | 1.370 (3) |
C1—H1 | 0.9800 | C11—H11 | 0.9300 |
C2—C8 | 1.516 (3) | C12—C13 | 1.373 (3) |
C2—C15 | 1.527 (3) | C12—Cl1 | 1.744 (2) |
C2—C3 | 1.554 (3) | C13—C14 | 1.382 (3) |
C3—C4 | 1.524 (3) | C13—H13 | 0.9300 |
C3—H3A | 0.9700 | C14—H14 | 0.9300 |
C3—H3B | 0.9700 | C15—H15A | 0.9600 |
C4—C5 | 1.529 (3) | C15—H15B | 0.9600 |
C4—H4A | 0.9700 | C15—H15C | 0.9600 |
C4—H4B | 0.9700 | C16—C21 | 1.377 (3) |
C5—C6 | 1.533 (3) | C16—C17 | 1.384 (3) |
C5—H5A | 0.9700 | C17—C18 | 1.386 (3) |
C5—H5B | 0.9700 | C17—H17 | 0.9300 |
C6—C8 | 1.498 (3) | C18—C19 | 1.363 (3) |
C6—C7 | 1.553 (3) | C18—H18 | 0.9300 |
C6—H6 | 0.9800 | C19—C20 | 1.364 (3) |
C7—N1 | 1.460 (2) | C19—Cl2 | 1.747 (2) |
C7—C16 | 1.515 (2) | C20—C21 | 1.389 (3) |
C7—H7 | 0.9800 | C20—H20 | 0.9300 |
C8—O1 | 1.217 (2) | C21—H21 | 0.9300 |
C9—C10 | 1.389 (3) | N1—H1A | 0.87 (2) |
C9—C14 | 1.391 (3) | ||
N1—C1—C9 | 110.30 (13) | C10—C9—C14 | 117.55 (17) |
N1—C1—C2 | 111.38 (14) | C10—C9—C1 | 120.56 (16) |
C9—C1—C2 | 111.78 (14) | C14—C9—C1 | 121.83 (16) |
N1—C1—H1 | 107.7 | C11—C10—C9 | 121.37 (18) |
C9—C1—H1 | 107.7 | C11—C10—H10 | 119.3 |
C2—C1—H1 | 107.7 | C9—C10—H10 | 119.3 |
C8—C2—C15 | 111.32 (15) | C12—C11—C10 | 119.18 (18) |
C8—C2—C3 | 104.31 (15) | C12—C11—H11 | 120.4 |
C15—C2—C3 | 109.74 (16) | C10—C11—H11 | 120.4 |
C8—C2—C1 | 106.57 (14) | C11—C12—C13 | 121.07 (18) |
C15—C2—C1 | 109.68 (15) | C11—C12—Cl1 | 119.56 (16) |
C3—C2—C1 | 115.08 (14) | C13—C12—Cl1 | 119.36 (16) |
C4—C3—C2 | 115.70 (16) | C12—C13—C14 | 119.27 (19) |
C4—C3—H3A | 108.4 | C12—C13—H13 | 120.4 |
C2—C3—H3A | 108.4 | C14—C13—H13 | 120.4 |
C4—C3—H3B | 108.4 | C13—C14—C9 | 121.50 (18) |
C2—C3—H3B | 108.4 | C13—C14—H14 | 119.3 |
H3A—C3—H3B | 107.4 | C9—C14—H14 | 119.3 |
C3—C4—C5 | 112.12 (17) | C2—C15—H15A | 109.5 |
C3—C4—H4A | 109.2 | C2—C15—H15B | 109.5 |
C5—C4—H4A | 109.2 | H15A—C15—H15B | 109.5 |
C3—C4—H4B | 109.2 | C2—C15—H15C | 109.5 |
C5—C4—H4B | 109.2 | H15A—C15—H15C | 109.5 |
H4A—C4—H4B | 107.9 | H15B—C15—H15C | 109.5 |
C4—C5—C6 | 113.87 (16) | C21—C16—C17 | 118.09 (18) |
C4—C5—H5A | 108.8 | C21—C16—C7 | 122.73 (17) |
C6—C5—H5A | 108.8 | C17—C16—C7 | 119.16 (17) |
C4—C5—H5B | 108.8 | C16—C17—C18 | 121.1 (2) |
C6—C5—H5B | 108.8 | C16—C17—H17 | 119.5 |
H5A—C5—H5B | 107.7 | C18—C17—H17 | 119.5 |
C8—C6—C5 | 107.78 (16) | C19—C18—C17 | 119.4 (2) |
C8—C6—C7 | 108.41 (15) | C19—C18—H18 | 120.3 |
C5—C6—C7 | 115.04 (15) | C17—C18—H18 | 120.3 |
C8—C6—H6 | 108.5 | C18—C19—C20 | 120.96 (19) |
C5—C6—H6 | 108.5 | C18—C19—Cl2 | 119.73 (18) |
C7—C6—H6 | 108.5 | C20—C19—Cl2 | 119.29 (18) |
N1—C7—C16 | 111.94 (14) | C19—C20—C21 | 119.4 (2) |
N1—C7—C6 | 109.61 (15) | C19—C20—H20 | 120.3 |
C16—C7—C6 | 110.16 (15) | C21—C20—H20 | 120.3 |
N1—C7—H7 | 108.3 | C16—C21—C20 | 121.0 (2) |
C16—C7—H7 | 108.3 | C16—C21—H21 | 119.5 |
C6—C7—H7 | 108.3 | C20—C21—H21 | 119.5 |
O1—C8—C6 | 122.90 (18) | C7—N1—C1 | 113.28 (13) |
O1—C8—C2 | 123.91 (18) | C7—N1—H1A | 109.6 (13) |
C6—C8—C2 | 113.12 (14) | C1—N1—H1A | 106.6 (14) |
N1—C1—C2—C8 | −54.97 (18) | C2—C1—C9—C14 | 79.6 (2) |
C9—C1—C2—C8 | −178.85 (14) | C14—C9—C10—C11 | −1.7 (3) |
N1—C1—C2—C15 | −175.58 (15) | C1—C9—C10—C11 | 175.53 (17) |
C9—C1—C2—C15 | 60.54 (19) | C9—C10—C11—C12 | −0.3 (3) |
N1—C1—C2—C3 | 60.1 (2) | C10—C11—C12—C13 | 2.1 (3) |
C9—C1—C2—C3 | −63.8 (2) | C10—C11—C12—Cl1 | −178.40 (15) |
C8—C2—C3—C4 | 54.2 (2) | C11—C12—C13—C14 | −1.7 (3) |
C15—C2—C3—C4 | 173.54 (17) | Cl1—C12—C13—C14 | 178.79 (15) |
C1—C2—C3—C4 | −62.2 (2) | C12—C13—C14—C9 | −0.5 (3) |
C2—C3—C4—C5 | −46.7 (2) | C10—C9—C14—C13 | 2.1 (3) |
C3—C4—C5—C6 | 44.8 (2) | C1—C9—C14—C13 | −175.09 (17) |
C4—C5—C6—C8 | −52.9 (2) | N1—C7—C16—C21 | 13.9 (3) |
C4—C5—C6—C7 | 68.2 (2) | C6—C7—C16—C21 | −108.3 (2) |
C8—C6—C7—N1 | 57.08 (19) | N1—C7—C16—C17 | −167.77 (18) |
C5—C6—C7—N1 | −63.6 (2) | C6—C7—C16—C17 | 70.0 (2) |
C8—C6—C7—C16 | −179.33 (15) | C21—C16—C17—C18 | 3.2 (4) |
C5—C6—C7—C16 | 60.0 (2) | C7—C16—C17—C18 | −175.2 (2) |
C5—C6—C8—O1 | −111.7 (2) | C16—C17—C18—C19 | −1.9 (4) |
C7—C6—C8—O1 | 123.23 (19) | C17—C18—C19—C20 | −1.0 (4) |
C5—C6—C8—C2 | 65.39 (19) | C17—C18—C19—Cl2 | −179.72 (19) |
C7—C6—C8—C2 | −59.72 (19) | C18—C19—C20—C21 | 2.4 (4) |
C15—C2—C8—O1 | −5.7 (3) | Cl2—C19—C20—C21 | −178.89 (18) |
C3—C2—C8—O1 | 112.63 (19) | C17—C16—C21—C20 | −1.8 (3) |
C1—C2—C8—O1 | −125.20 (18) | C7—C16—C21—C20 | 176.5 (2) |
C15—C2—C8—C6 | 177.33 (16) | C19—C20—C21—C16 | −0.9 (4) |
C3—C2—C8—C6 | −64.39 (18) | C16—C7—N1—C1 | 179.17 (14) |
C1—C2—C8—C6 | 57.77 (19) | C6—C7—N1—C1 | −58.29 (19) |
N1—C1—C9—C10 | 137.96 (17) | C9—C1—N1—C7 | −176.97 (14) |
C2—C1—C9—C10 | −97.55 (19) | C2—C1—N1—C7 | 58.32 (19) |
N1—C1—C9—C14 | −44.9 (2) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.87 (2) | 2.45 (2) | 3.309 (2) | 170.2 (18) |
Symmetry code: (i) x, y−1, z. |
Experimental details
Crystal data | |
Chemical formula | C21H21Cl2NO |
Mr | 374.29 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 298 |
a, b, c (Å) | 28.4515 (14), 7.0380 (3), 21.2771 (12) |
β (°) | 117.148 (4) |
V (Å3) | 3791.2 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.35 |
Crystal size (mm) | 0.58 × 0.42 × 0.18 |
Data collection | |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1999) |
Tmin, Tmax | 0.822, 0.940 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 24985, 4661, 3149 |
Rint | 0.033 |
(sin θ/λ)max (Å−1) | 0.666 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.125, 1.02 |
No. of reflections | 4661 |
No. of parameters | 231 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.36, −0.43 |
Computer programs: APEX2 (Bruker, 2004), APEX2 and SAINT-Plus (Bruker, 2004), SAINT-Plus and XPREP (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997) and Mercury (Macrae et al., 2006).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O1i | 0.87 (2) | 2.45 (2) | 3.309 (2) | 170.2 (18) |
Symmetry code: (i) x, y−1, z. |
3-Azabicyclo[3.3.1]nonanes are an important class of heterocyclic compounds due to their broad spectrum of biological activities such as antibacterial, antifungal, analgesic, antogonistic, anti-inflammatory, local anesthetic and hypotensive activity, and their presence in a wide variety of naturally occurring diterpenoid/norditerpenoid alkaloids (Parthiban et al., 2009; Hardick et al., 1996; Jeyaraman & Avila, 1981). As stereochemistry plays a vital role in biological activities, it is essential to establish the stereochemistry of the synthesized bio-active molecules. Owing to the diverse possibilities in the conformation of the 3-azabicycle such as chair-chair (Parthiban et al., 2009b & 2010), chair-boat (Smith-Verdier et al., 1983) and boat-boat (Padegimas & Kovacic, 1972), the present crystal study was undertaken to examine the stereochemistry of the synthesized 2,4-bis(4-chlorophenyl)-1-methyl-3-azabicyclo[3.3.1]nonan-9-one.
The crystallographic analysis of the title compound shows that the piperidine ring adopts a near ideal chair conformation. The total puckering amplitude QT is 0.587 (2)Å and the phase angle θ is 1.8 (2)° (Cremer & Pople, 1975). The smallest displacement asymmetry parameters being q2 and q3 are 0.022 (2)Å and 0.587 (2) Å, respectively (Nardelli, 1983). The deviation of ring atoms C8 and N1 from the C1/C2/C6/C7 plane by 0.677 (3)Å and -0.642 (3) Å, respectively.
The crystallographic analysis of the title compound suggests that the cyclohexane ring deviates from the ideal chair conformation. The total puckering amplitude QT is 0.573 (2)Å and the phase angle θ is 13.8 (2)° (Cremer & Pople, 1975). The smallest displacement asymmetry parameters being q2 and q3 are 0.134 (2)Å and 0.556 (2) Å, respectively (Nardelli, 1983). The deviation of ring atoms C4 and C8 from the C2/C3/C5/C6 plane by -0.554 (4)Å and 0.723 (2) Å, respectively.
According to the crystallogrphic analysis, the title compound, C21H21Cl2N O, exists in a twin-chair conformation with an equatorial orientation of the para-chlorophenyl groups on both sides of the secondary amino group.
In the title compound, the para-chlorophenyl rings are orientated at an angle of 36.58 (2)° with respect to one another, whereas in its non-methyl analog, 2,4-bis(4-chlorophenyl)-3- azabicyclo[3.3.1]nonan-9-one, the angle is 31.33 (3)°. The crystal structure of the title compound is stabilized by an intermolecular N—H···O interaction and a weak Cl—Cl interaction [Cl···Cl = 3.43 Å]. Though similar interactions observed in the non-methyl analog, the hydrogen bond geometries such as distance and angle of N1—H1···O1 [respectively, 3.1202Å and 160.2 (18)°] are comparatively lower than the title compound (Table 1).
In the title compound, the torsion angles of C1—C2—C8—C9 and C6—C7—C8—C16 are -178.85 (4)° and -179.35 (4)°, respectively (in the non-methyl analog of the title compound, they are -177.88 (4)° and -179.01 (4)°).