In the title compound, C
11H
16N
4S, an intramolecular N—H
N hydrogen bond generates an
S(5) ring. In the crystal, inversion dimers linked by pairs of N—H
S bonds occur, generating an
R22(8) loop.
Supporting information
CCDC reference: 781372
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.055
- wR factor = 0.178
- Data-to-parameter ratio = 19.6
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT412_ALERT_2_B Short Intra XH3 .. XHn H1A .. H8A .. 1.79 Ang.
Alert level C
PLAT230_ALERT_2_C Hirshfeld Test Diff for S1 -- C10 .. 5.10 su
PLAT412_ALERT_2_C Short Intra XH3 .. XHn H2B .. H4B .. 1.81 Ang.
PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 4
PLAT152_ALERT_1_C The Supplied and Calc. Volume s.u. Differ by ... 2 Units
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1
C11 H16 N4 S
PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 4
Alert level G
PLAT072_ALERT_2_G SHELXL First Parameter in WGHT Unusually Large. 0.12
PLAT128_ALERT_4_G Alternate Setting of Space-group P21/c ....... P21/n
PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K
PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature 293 K
PLAT380_ALERT_4_G Check Incorrectly? Oriented X(sp2)-Methyl Moiety C1
PLAT380_ALERT_4_G Check Incorrectly? Oriented X(sp2)-Methyl Moiety C2
PLAT380_ALERT_4_G Check Incorrectly? Oriented X(sp2)-Methyl Moiety C11
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
6 ALERT level C = Check and explain
7 ALERT level G = General alerts; check
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
4 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level G
PUBL013_ALERT_1_G The _publ_section_comment (discussion of study) is
missing. This is required for a full paper submission (but is
optional for an electronic paper).
0 ALERT level A = Data missing that is essential or data in wrong format
1 ALERT level G = General alerts. Data that may be required is missing
A mixture of 4-(dimethylamino)benzaldehyde (0.10 mol), and
4-methylthiosemicarbazide (0.10 mol) was stirred in refluxing ethanol (10 ml)
for 4 h to afford the title compound (0.083 mol, yield 83%).
Colourless blocks of (I) were obtained by recrystallization from
ethanol at room temperature.
H atoms were fixed geometrically and allowed to ride on their attached atoms,
with C—H distances = 0.93-0.97 Å; N—H = 0.86Å and with
Uiso(H) = 1.2Ueq(C,N) or 1.5Ueq(Cmethyl).
Structure description
top
For a related structure, see: Girgis (2006).
Data collection: SMART (Bruker 1997); cell refinement: SAINT (Bruker 1997); data reduction: SAINT (Bruker 1997); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
1-(4-(Dimethylamino)benzylidene)-4-methylthiosemicarbazide
top
Crystal data top
C11H16N4S | F(000) = 504 |
Mr = 236.34 | Dx = 1.259 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 2391 reflections |
a = 10.517 (2) Å | θ = 3.2–27.5° |
b = 12.873 (3) Å | µ = 0.24 mm−1 |
c = 10.552 (2) Å | T = 293 K |
β = 119.19 (3)° | Block, colorless |
V = 1247.3 (4) Å3 | 0.22 × 0.20 × 0.18 mm |
Z = 4 | |
Data collection top
Bruker SMART CCD diffractometer | 2391 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.031 |
Graphite monochromator | θmax = 27.5°, θmin = 3.2° |
phi and ω scans | h = −13→11 |
11842 measured reflections | k = −15→16 |
2847 independent reflections | l = −13→13 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.055 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.178 | H-atom parameters constrained |
S = 1.12 | w = 1/[σ2(Fo2) + (0.1186P)2 + 0.111P] where P = (Fo2 + 2Fc2)/3 |
2847 reflections | (Δ/σ)max < 0.001 |
145 parameters | Δρmax = 0.43 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
Crystal data top
C11H16N4S | V = 1247.3 (4) Å3 |
Mr = 236.34 | Z = 4 |
Monoclinic, P21/n | Mo Kα radiation |
a = 10.517 (2) Å | µ = 0.24 mm−1 |
b = 12.873 (3) Å | T = 293 K |
c = 10.552 (2) Å | 0.22 × 0.20 × 0.18 mm |
β = 119.19 (3)° | |
Data collection top
Bruker SMART CCD diffractometer | 2391 reflections with I > 2σ(I) |
11842 measured reflections | Rint = 0.031 |
2847 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.055 | 0 restraints |
wR(F2) = 0.178 | H-atom parameters constrained |
S = 1.12 | Δρmax = 0.43 e Å−3 |
2847 reflections | Δρmin = −0.26 e Å−3 |
145 parameters | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are
estimated using the full covariance matrix. The cell esds are taken into
account individually in the estimation of esds in distances, angles and
torsion angles; correlations between esds in cell parameters are only used
when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc. and is
not relevant to the choice of reflections for refinement. R-factors
based on F2 are statistically about twice as large as those based on
F, and R- factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.60342 (4) | 0.15360 (4) | 0.05021 (6) | 0.0595 (2) | |
N2 | 0.17952 (14) | 0.12707 (11) | −0.13146 (16) | 0.0468 (3) | |
N3 | 0.32723 (14) | 0.10421 (10) | −0.05970 (16) | 0.0491 (4) | |
H3A | 0.3569 | 0.0426 | −0.0272 | 0.059* | |
C6 | −0.06129 (17) | 0.06639 (12) | −0.20701 (17) | 0.0435 (4) | |
N4 | 0.36809 (16) | 0.27166 (11) | −0.09695 (18) | 0.0537 (4) | |
H4A | 0.2749 | 0.2772 | −0.1463 | 0.064* | |
C3 | −0.36590 (17) | 0.09210 (14) | −0.32393 (17) | 0.0481 (4) | |
C7 | −0.13111 (19) | 0.15789 (12) | −0.2769 (2) | 0.0495 (4) | |
H7A | −0.0763 | 0.2116 | −0.2848 | 0.059* | |
C10 | 0.42361 (17) | 0.17963 (13) | −0.04141 (17) | 0.0433 (4) | |
C9 | 0.09536 (17) | 0.05248 (12) | −0.13907 (18) | 0.0448 (4) | |
H9A | 0.1355 | −0.0119 | −0.1002 | 0.054* | |
C5 | −0.14729 (19) | −0.01233 (13) | −0.1990 (2) | 0.0501 (4) | |
H5A | −0.1036 | −0.0746 | −0.1543 | 0.060* | |
C8 | −0.27852 (19) | 0.17078 (14) | −0.3344 (2) | 0.0537 (4) | |
H8A | −0.3215 | 0.2327 | −0.3812 | 0.064* | |
C4 | −0.29596 (19) | −0.00089 (14) | −0.2553 (2) | 0.0529 (4) | |
H4B | −0.3502 | −0.0552 | −0.2478 | 0.063* | |
N1 | −0.51338 (16) | 0.10490 (14) | −0.38125 (18) | 0.0634 (4) | |
C2 | −0.5998 (2) | 0.0282 (2) | −0.3574 (3) | 0.0758 (6) | |
H2B | −0.5423 | −0.0329 | −0.3152 | 0.114* | |
H2C | −0.6834 | 0.0107 | −0.4484 | 0.114* | |
H2D | −0.6313 | 0.0560 | −0.2929 | 0.114* | |
C11 | 0.4544 (2) | 0.36333 (16) | −0.0797 (3) | 0.0730 (6) | |
H12A | 0.3912 | 0.4207 | −0.1293 | 0.109* | |
H12B | 0.5174 | 0.3507 | −0.1201 | 0.109* | |
H12C | 0.5120 | 0.3795 | 0.0216 | 0.109* | |
C1 | −0.5822 (2) | 0.2016 (2) | −0.4442 (3) | 0.0929 (8) | |
H1A | −0.5142 | 0.2460 | −0.4541 | 0.139* | |
H1B | −0.6138 | 0.2345 | −0.3828 | 0.139* | |
H1C | −0.6647 | 0.1893 | −0.5381 | 0.139* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0340 (3) | 0.0526 (3) | 0.0744 (4) | −0.00233 (15) | 0.0127 (2) | −0.00072 (19) |
N2 | 0.0336 (7) | 0.0484 (7) | 0.0547 (8) | 0.0008 (5) | 0.0187 (6) | 0.0001 (6) |
N3 | 0.0335 (6) | 0.0439 (7) | 0.0637 (8) | 0.0010 (5) | 0.0188 (6) | 0.0032 (6) |
C6 | 0.0375 (8) | 0.0465 (8) | 0.0464 (8) | −0.0018 (6) | 0.0205 (6) | −0.0026 (6) |
N4 | 0.0395 (7) | 0.0477 (8) | 0.0626 (9) | −0.0017 (5) | 0.0160 (6) | 0.0071 (6) |
C3 | 0.0382 (8) | 0.0593 (10) | 0.0458 (8) | −0.0015 (6) | 0.0197 (6) | −0.0050 (7) |
C7 | 0.0438 (9) | 0.0455 (9) | 0.0594 (10) | −0.0032 (6) | 0.0253 (8) | 0.0021 (7) |
C10 | 0.0382 (7) | 0.0455 (8) | 0.0436 (8) | −0.0027 (6) | 0.0180 (6) | −0.0032 (6) |
C9 | 0.0391 (8) | 0.0437 (8) | 0.0504 (8) | −0.0006 (6) | 0.0210 (6) | −0.0012 (6) |
C5 | 0.0446 (9) | 0.0455 (8) | 0.0572 (10) | −0.0021 (6) | 0.0226 (8) | 0.0055 (7) |
C8 | 0.0447 (9) | 0.0481 (9) | 0.0653 (11) | 0.0052 (7) | 0.0245 (8) | 0.0049 (7) |
C4 | 0.0433 (9) | 0.0567 (9) | 0.0582 (10) | −0.0095 (7) | 0.0245 (8) | 0.0025 (7) |
N1 | 0.0370 (8) | 0.0805 (11) | 0.0677 (10) | −0.0010 (7) | 0.0218 (7) | 0.0000 (8) |
C2 | 0.0468 (10) | 0.1131 (18) | 0.0689 (12) | −0.0167 (11) | 0.0293 (9) | −0.0044 (12) |
C11 | 0.0597 (12) | 0.0529 (10) | 0.0951 (16) | −0.0073 (9) | 0.0289 (11) | 0.0121 (10) |
C1 | 0.0477 (11) | 0.0861 (17) | 0.128 (2) | 0.0166 (11) | 0.0301 (13) | −0.0016 (16) |
Geometric parameters (Å, º) top
S1—C10 | 1.6852 (17) | C9—H9A | 0.9300 |
N2—C9 | 1.282 (2) | C5—C4 | 1.383 (3) |
N2—N3 | 1.3877 (19) | C5—H5A | 0.9300 |
N3—C10 | 1.348 (2) | C8—H8A | 0.9300 |
N3—H3A | 0.8600 | C4—H4B | 0.9300 |
C6—C5 | 1.388 (2) | N1—C1 | 1.431 (3) |
C6—C7 | 1.394 (2) | N1—C2 | 1.444 (3) |
C6—C9 | 1.452 (2) | C2—H2B | 0.9600 |
N4—C10 | 1.325 (2) | C2—H2C | 0.9600 |
N4—C11 | 1.445 (2) | C2—H2D | 0.9600 |
N4—H4A | 0.8600 | C11—H12A | 0.9600 |
C3—N1 | 1.372 (2) | C11—H12B | 0.9600 |
C3—C4 | 1.407 (2) | C11—H12C | 0.9600 |
C3—C8 | 1.408 (2) | C1—H1A | 0.9600 |
C7—C8 | 1.372 (2) | C1—H1B | 0.9600 |
C7—H7A | 0.9300 | C1—H1C | 0.9600 |
| | | |
C9—N2—N3 | 115.50 (14) | C7—C8—H8A | 119.4 |
C10—N3—N2 | 119.27 (14) | C3—C8—H8A | 119.4 |
C10—N3—H3A | 120.4 | C5—C4—C3 | 120.64 (15) |
N2—N3—H3A | 120.4 | C5—C4—H4B | 119.7 |
C5—C6—C7 | 117.29 (14) | C3—C4—H4B | 119.7 |
C5—C6—C9 | 119.74 (14) | C3—N1—C1 | 121.07 (17) |
C7—C6—C9 | 122.92 (14) | C3—N1—C2 | 120.89 (18) |
C10—N4—C11 | 124.08 (16) | C1—N1—C2 | 117.18 (18) |
C10—N4—H4A | 118.0 | N1—C2—H2B | 109.5 |
C11—N4—H4A | 118.0 | N1—C2—H2C | 109.5 |
N1—C3—C4 | 121.59 (16) | H2B—C2—H2C | 109.5 |
N1—C3—C8 | 121.31 (16) | N1—C2—H2D | 109.5 |
C4—C3—C8 | 117.07 (14) | H2B—C2—H2D | 109.5 |
C8—C7—C6 | 121.76 (15) | H2C—C2—H2D | 109.5 |
C8—C7—H7A | 119.1 | N4—C11—H12A | 109.5 |
C6—C7—H7A | 119.1 | N4—C11—H12B | 109.5 |
N4—C10—N3 | 116.27 (14) | H12A—C11—H12B | 109.5 |
N4—C10—S1 | 124.11 (13) | N4—C11—H12C | 109.5 |
N3—C10—S1 | 119.61 (13) | H12A—C11—H12C | 109.5 |
N2—C9—C6 | 121.42 (15) | H12B—C11—H12C | 109.5 |
N2—C9—H9A | 119.3 | N1—C1—H1A | 109.5 |
C6—C9—H9A | 119.3 | N1—C1—H1B | 109.5 |
C4—C5—C6 | 121.98 (15) | H1A—C1—H1B | 109.5 |
C4—C5—H5A | 119.0 | N1—C1—H1C | 109.5 |
C6—C5—H5A | 119.0 | H1A—C1—H1C | 109.5 |
C7—C8—C3 | 121.23 (16) | H1B—C1—H1C | 109.5 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···N2 | 0.86 | 2.22 | 2.613 (2) | 108 |
N3—H3A···S1i | 0.86 | 2.59 | 3.3890 (16) | 155 |
Symmetry code: (i) −x+1, −y, −z. |
Experimental details
Crystal data |
Chemical formula | C11H16N4S |
Mr | 236.34 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 293 |
a, b, c (Å) | 10.517 (2), 12.873 (3), 10.552 (2) |
β (°) | 119.19 (3) |
V (Å3) | 1247.3 (4) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.22 × 0.20 × 0.18 |
|
Data collection |
Diffractometer | Bruker SMART CCD |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11842, 2847, 2391 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.649 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.055, 0.178, 1.12 |
No. of reflections | 2847 |
No. of parameters | 145 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.43, −0.26 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H4A···N2 | 0.86 | 2.22 | 2.613 (2) | 108 |
N3—H3A···S1i | 0.86 | 2.59 | 3.3890 (16) | 155 |
Symmetry code: (i) −x+1, −y, −z. |