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Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810025201/hb5526sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536810025201/hb5526Isup2.hkl |
CCDC reference: 788189
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean
(C-C) = 0.019 Å
- R factor = 0.063
- wR factor = 0.165
- Data-to-parameter ratio = 17.6
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT341_ALERT_3_B Low Bond Precision on C-C Bonds (x 1000) Ang .. 19
Alert level C PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 2 PLAT915_ALERT_3_C Low Friedel Pair Coverage ...................... 71.62 Perc. PLAT125_ALERT_4_C No _symmetry_space_group_name_Hall Given ....... ? PLAT234_ALERT_4_C Large Hirshfeld Difference C1 -- C2 .. 0.16 Ang.
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.00 From the CIF: _reflns_number_total 2408 Count of symmetry unique reflns 1451 Completeness (_total/calc) 165.95% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 957 Fraction of Friedel pairs measured 0.660 Are heavy atom types Z>Si present yes
0 ALERT level A = In general: serious problem 1 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
2-Acetylpyridine (0.1 mmol, 12.1 mg) and cyclopropylamine (0.1 mmol, 5.7 mg) were mixed and stirred in methanol (10 ml) for 30 min. Then a methanol solution (5 ml) of zinc bromide (0.1 mmol, 22.5 mg) was added to the mixture. The final mixture was stirred for another 30 min to give a colourless solution. Colourless blocks of (I) were obtained by slow evaporation of the solution at room temperature.
H atoms were positioned geometrically (C—H = 0.93–0.98 Å) and refined using a riding model, with with Uiso(H) = 1.2 or 1.5Ueq(C). A rotating group model was used for the methyl group.
Schiff bases have often been used as chelating ligands in coordination chemistry (Hamaker et al., 2010; Wang et al., 2010; Mirkhani et al., 2010; Liu & Yang, 2009). We report here the crystal structure of the title new zinc complex with the chelating Schiff base ligand cyclopropyl-(1-pyridin-2-ylethylidene)amine.
The Zn atom in the complex is four-coordinated by one pyridine N and one imine N atoms of the Schiff base ligand, and by two bromide atoms, forming a tetrahedral geometry (Fig. 1). The dihedral angle between the pyridine and the cyclopropyl rings is 95.4 (8)°. The bond lengths (Table 1) related to the Zn atom are comparable to those observed in similar zinc complexes (Zakrzewski & Lingafelter, 1970; Gourbatsis et al., 1999; Merino et al., 2001; Majumder et al., 2006).
For background to Schiff bases as chelating ligands, see: Hamaker et al. (2010); Wang et al. (2010); Mirkhani et al. (2010); Liu & Yang (2009). For similar zinc complexes, see: Zakrzewski & Lingafelter (1970); Gourbatsis et al. (1999); Merino et al. (2001); Majumder et al. (2006).
Data collection: APEX2 (Bruker, 2004); cell refinement: SAINT (Bruker, 2004); data reduction: SAINT (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
![]() | Fig. 1. The molecular structure of the title complex, showing 30% probability displacement ellipsoids. |
[ZnBr2(C10H12N2)] | F(000) = 372 |
Mr = 385.41 | Dx = 1.978 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.029 (3) Å | Cell parameters from 1405 reflections |
b = 14.090 (3) Å | θ = 2.8–25.0° |
c = 7.037 (2) Å | µ = 8.04 mm−1 |
β = 111.820 (3)° | T = 298 K |
V = 647.0 (4) Å3 | Block, colourless |
Z = 2 | 0.23 × 0.23 × 0.21 mm |
Bruker APEXII CCD diffractometer | 2408 independent reflections |
Radiation source: fine-focus sealed tube | 1708 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.104 |
ω scans | θmax = 27.0°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | h = −8→8 |
Tmin = 0.259, Tmax = 0.283 | k = −18→17 |
4060 measured reflections | l = −8→8 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.165 | w = 1/[σ2(Fo2) + (0.0966P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.95 | (Δ/σ)max < 0.001 |
2408 reflections | Δρmax = 0.96 e Å−3 |
137 parameters | Δρmin = −1.09 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 957 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.05 (3) |
[ZnBr2(C10H12N2)] | V = 647.0 (4) Å3 |
Mr = 385.41 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 7.029 (3) Å | µ = 8.04 mm−1 |
b = 14.090 (3) Å | T = 298 K |
c = 7.037 (2) Å | 0.23 × 0.23 × 0.21 mm |
β = 111.820 (3)° |
Bruker APEXII CCD diffractometer | 2408 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2004) | 1708 reflections with I > 2σ(I) |
Tmin = 0.259, Tmax = 0.283 | Rint = 0.104 |
4060 measured reflections |
R[F2 > 2σ(F2)] = 0.063 | H-atom parameters constrained |
wR(F2) = 0.165 | Δρmax = 0.96 e Å−3 |
S = 0.95 | Δρmin = −1.09 e Å−3 |
2408 reflections | Absolute structure: Flack (1983), 957 Friedel pairs |
137 parameters | Absolute structure parameter: −0.05 (3) |
1 restraint |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Zn1 | 0.01583 (18) | 0.10050 (8) | 0.5412 (2) | 0.0380 (3) | |
Br1 | −0.0650 (2) | −0.05302 (9) | 0.6175 (2) | 0.0601 (4) | |
Br2 | 0.0576 (2) | 0.12235 (9) | 0.2262 (2) | 0.0559 (4) | |
N1 | −0.1663 (14) | 0.2047 (7) | 0.5832 (15) | 0.040 (2) | |
N2 | 0.2313 (14) | 0.1748 (7) | 0.7783 (14) | 0.036 (2) | |
C1 | −0.3710 (18) | 0.2147 (10) | 0.491 (2) | 0.050 (3) | |
H1 | −0.4447 | 0.1674 | 0.4022 | 0.060* | |
C2 | −0.477 (2) | 0.2918 (10) | 0.524 (2) | 0.053 (3) | |
H2 | −0.6184 | 0.2965 | 0.4582 | 0.064* | |
C3 | −0.369 (2) | 0.3597 (10) | 0.652 (2) | 0.057 (4) | |
H3 | −0.4351 | 0.4134 | 0.6742 | 0.069* | |
C4 | −0.158 (2) | 0.3503 (9) | 0.753 (2) | 0.047 (3) | |
H4 | −0.0833 | 0.3966 | 0.8450 | 0.056* | |
C5 | −0.0622 (16) | 0.2727 (8) | 0.7166 (16) | 0.034 (2) | |
C6 | 0.1628 (17) | 0.2531 (8) | 0.8195 (16) | 0.036 (2) | |
C7 | 0.288 (2) | 0.3276 (9) | 0.968 (2) | 0.058 (4) | |
H7A | 0.2300 | 0.3390 | 1.0702 | 0.087* | |
H7B | 0.2870 | 0.3854 | 0.8960 | 0.087* | |
H7C | 0.4265 | 0.3057 | 1.0337 | 0.087* | |
C8 | 0.4414 (17) | 0.1441 (9) | 0.8788 (19) | 0.044 (3) | |
H8 | 0.5438 | 0.1939 | 0.9385 | 0.053* | |
C9 | 0.471 (2) | 0.0526 (10) | 0.995 (2) | 0.051 (3) | |
H9A | 0.3501 | 0.0188 | 0.9917 | 0.061* | |
H9B | 0.5889 | 0.0474 | 1.1220 | 0.061* | |
C10 | 0.511 (2) | 0.0589 (11) | 0.799 (2) | 0.058 (4) | |
H10A | 0.6518 | 0.0572 | 0.8084 | 0.070* | |
H10B | 0.4131 | 0.0285 | 0.6781 | 0.070* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Zn1 | 0.0393 (6) | 0.0335 (7) | 0.0441 (7) | −0.0027 (6) | 0.0189 (5) | −0.0084 (6) |
Br1 | 0.0749 (9) | 0.0420 (7) | 0.0784 (10) | −0.0192 (7) | 0.0460 (8) | −0.0117 (7) |
Br2 | 0.0672 (8) | 0.0607 (9) | 0.0464 (7) | −0.0071 (6) | 0.0287 (7) | −0.0038 (6) |
N1 | 0.039 (5) | 0.039 (6) | 0.039 (5) | 0.000 (4) | 0.010 (4) | −0.005 (4) |
N2 | 0.040 (5) | 0.037 (5) | 0.029 (5) | 0.004 (4) | 0.011 (4) | 0.009 (4) |
C1 | 0.043 (7) | 0.061 (8) | 0.045 (7) | 0.001 (6) | 0.016 (6) | 0.001 (6) |
C2 | 0.056 (8) | 0.056 (8) | 0.056 (8) | 0.029 (7) | 0.030 (7) | 0.009 (7) |
C3 | 0.069 (9) | 0.045 (8) | 0.066 (9) | 0.028 (7) | 0.035 (8) | 0.013 (7) |
C4 | 0.066 (8) | 0.034 (6) | 0.045 (7) | 0.006 (6) | 0.026 (7) | 0.001 (5) |
C5 | 0.035 (6) | 0.038 (6) | 0.028 (5) | 0.003 (5) | 0.009 (5) | 0.009 (5) |
C6 | 0.051 (7) | 0.031 (6) | 0.030 (6) | −0.002 (5) | 0.020 (5) | 0.001 (4) |
C7 | 0.065 (9) | 0.041 (8) | 0.061 (9) | −0.007 (6) | 0.016 (8) | −0.014 (6) |
C8 | 0.032 (6) | 0.043 (7) | 0.052 (7) | 0.002 (5) | 0.009 (5) | 0.001 (6) |
C9 | 0.052 (8) | 0.047 (7) | 0.054 (7) | 0.012 (6) | 0.019 (7) | 0.015 (6) |
C10 | 0.046 (7) | 0.079 (10) | 0.047 (7) | 0.018 (7) | 0.015 (6) | 0.007 (7) |
Zn1—N1 | 2.041 (9) | C4—H4 | 0.9300 |
Zn1—N2 | 2.073 (10) | C5—C6 | 1.500 (15) |
Zn1—Br1 | 2.3488 (18) | C6—C7 | 1.514 (16) |
Zn1—Br2 | 2.3616 (19) | C7—H7A | 0.9600 |
N1—C1 | 1.348 (15) | C7—H7B | 0.9600 |
N1—C5 | 1.350 (15) | C7—H7C | 0.9600 |
N2—C6 | 1.279 (15) | C8—C10 | 1.48 (2) |
N2—C8 | 1.446 (14) | C8—C9 | 1.498 (18) |
C1—C2 | 1.383 (18) | C8—H8 | 0.9800 |
C1—H1 | 0.9300 | C9—C10 | 1.506 (19) |
C2—C3 | 1.34 (2) | C9—H9A | 0.9700 |
C2—H2 | 0.9300 | C9—H9B | 0.9700 |
C3—C4 | 1.392 (19) | C10—H10A | 0.9700 |
C3—H3 | 0.9300 | C10—H10B | 0.9700 |
C4—C5 | 1.358 (17) | ||
N1—Zn1—N2 | 80.2 (4) | N2—C6—C5 | 117.9 (10) |
N1—Zn1—Br1 | 114.3 (3) | N2—C6—C7 | 125.7 (11) |
N2—Zn1—Br1 | 116.6 (3) | C5—C6—C7 | 116.4 (10) |
N1—Zn1—Br2 | 110.2 (3) | C6—C7—H7A | 109.5 |
N2—Zn1—Br2 | 112.4 (3) | C6—C7—H7B | 109.5 |
Br1—Zn1—Br2 | 117.36 (7) | H7A—C7—H7B | 109.5 |
C1—N1—C5 | 117.7 (10) | C6—C7—H7C | 109.5 |
C1—N1—Zn1 | 128.4 (8) | H7A—C7—H7C | 109.5 |
C5—N1—Zn1 | 113.8 (7) | H7B—C7—H7C | 109.5 |
C6—N2—C8 | 123.3 (11) | N2—C8—C10 | 118.4 (11) |
C6—N2—Zn1 | 113.2 (7) | N2—C8—C9 | 115.8 (10) |
C8—N2—Zn1 | 123.4 (8) | C10—C8—C9 | 60.7 (9) |
N1—C1—C2 | 123.2 (13) | N2—C8—H8 | 116.7 |
N1—C1—H1 | 118.4 | C10—C8—H8 | 116.7 |
C2—C1—H1 | 118.4 | C9—C8—H8 | 116.7 |
C3—C2—C1 | 117.8 (12) | C8—C9—C10 | 59.1 (9) |
C3—C2—H2 | 121.1 | C8—C9—H9A | 117.9 |
C1—C2—H2 | 121.1 | C10—C9—H9A | 117.9 |
C2—C3—C4 | 120.3 (12) | C8—C9—H9B | 117.9 |
C2—C3—H3 | 119.8 | C10—C9—H9B | 117.9 |
C4—C3—H3 | 119.8 | H9A—C9—H9B | 115.0 |
C5—C4—C3 | 119.3 (12) | C8—C10—C9 | 60.2 (8) |
C5—C4—H4 | 120.4 | C8—C10—H10A | 117.8 |
C3—C4—H4 | 120.4 | C9—C10—H10A | 117.8 |
N1—C5—C4 | 121.6 (10) | C8—C10—H10B | 117.8 |
N1—C5—C6 | 114.0 (10) | C9—C10—H10B | 117.8 |
C4—C5—C6 | 124.3 (11) | H10A—C10—H10B | 114.9 |
Experimental details
Crystal data | |
Chemical formula | [ZnBr2(C10H12N2)] |
Mr | 385.41 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 298 |
a, b, c (Å) | 7.029 (3), 14.090 (3), 7.037 (2) |
β (°) | 111.820 (3) |
V (Å3) | 647.0 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 8.04 |
Crystal size (mm) | 0.23 × 0.23 × 0.21 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 2004) |
Tmin, Tmax | 0.259, 0.283 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4060, 2408, 1708 |
Rint | 0.104 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.063, 0.165, 0.95 |
No. of reflections | 2408 |
No. of parameters | 137 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.96, −1.09 |
Absolute structure | Flack (1983), 957 Friedel pairs |
Absolute structure parameter | −0.05 (3) |
Computer programs: APEX2 (Bruker, 2004), SAINT (Bruker, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
Schiff bases have often been used as chelating ligands in coordination chemistry (Hamaker et al., 2010; Wang et al., 2010; Mirkhani et al., 2010; Liu & Yang, 2009). We report here the crystal structure of the title new zinc complex with the chelating Schiff base ligand cyclopropyl-(1-pyridin-2-ylethylidene)amine.
The Zn atom in the complex is four-coordinated by one pyridine N and one imine N atoms of the Schiff base ligand, and by two bromide atoms, forming a tetrahedral geometry (Fig. 1). The dihedral angle between the pyridine and the cyclopropyl rings is 95.4 (8)°. The bond lengths (Table 1) related to the Zn atom are comparable to those observed in similar zinc complexes (Zakrzewski & Lingafelter, 1970; Gourbatsis et al., 1999; Merino et al., 2001; Majumder et al., 2006).