

Crystal structure of (E)-4-hydroxy-3-{1-[(4-hydroxyphenyl)imino]ethyl}-6-methyl-2H-pyran-2-one



Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S2056989015012840/hb7460sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S2056989015012840/hb7460Isup2.hkl |
![]() | Chemical Markup Language (CML) file https://doi.org/10.1107/S2056989015012840/hb7460Isup3.cml |
CCDC reference: 1410367
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.047
- wR factor = 0.148
- Data-to-parameter ratio = 14.9
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 8 Report PLAT922_ALERT_1_C wR2 in the CIF and FCF Differ by ............... 0.0014 Check PLAT927_ALERT_1_C Reported and Calculated wR2 Differ by ......... 0.0014 Check PLAT975_ALERT_2_C Check Calcd Residual Density 0.88A From N1 0.54 eA-3
Alert level G PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF Please Do ! PLAT180_ALERT_4_G Check Cell Rounding: # of Values Ending with 0 = 3 PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 10 Note
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 4 ALERT level C = Check. Ensure it is not caused by an omission or oversight 5 ALERT level G = General information/check it is not something unexpected 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
Compound (I) was prepared by refluxing a mixture of a solution containing dehydroacetic acid (0.01 mmol) and para-4-aminophenol (0.01 mmol) in ethanol (40 ml). The reaction mixture was stirred for 2 h under reflux and left to cool. Yellow crystals grew after a few days.
C—H and O—H hydrogen atoms were placed in calculated positions and refined as riding atoms with C—H distances of 0.93 Å with Uiso(H) = 1.2Ueq(C) and O—H distances of 0.82 Å, with Uiso(H) = 1.2Ueq(N).
The methyl H atoms were constrained to an ideal geometry (C—H = 0.96 Å) with Uiso(H) = 1.2Ueq(C), but were allowed to rotate freely about the C—C bonds.
Hydroxy Schiff bases have been extensively studied due to their biological, photochromic and thermochromic properties (Garnovskii et al., 1993; Hadjoudis et al., 2004). They are potential materials for optical memory and switch devices (Zhao et al., 2007). Proton transfer in these compounds forms the basis for an explanation of the mechanisms of various biological processes where proton transfer is the rate-determining step (Lussier et al., 1987). In general, O-hydroxy Schiff bases exhibit two possible tautomeric forms, the phenol-imine (or benzenoid) and ketoamine (or quinoid) forms. Depending on the tautomers, two types of intra-molecular hydrogen bonds are possible: O—H···N in benzenoid and N—H···O in quinoid tautomers.
As part of our ongoing studies of Schiff bases (Djedouani et al., 2007, 2008), we now describe the synthesis and the structure of the title compound, which takes the form phenol-imine and complete a six-membered pseudocycle via an intramolecular O—H····O hydrogen bond.
The dehydroacetic acid ring and phenyl ring are almost planer with r.m.s deviation for the mean plane are 0.0260 and 0.0027 respectively. The dihedral angle between the two rings is 53.30 (0.05) °. The two torsional angles τ1 (N1—C5—C14—C4) and τ2 (C5—N1—C1—C6) defining the confirmation of the molecule.
The N1—C5 distance of 1.324 (2) Å agree with similar bond in related compounds (Girija & Begum, 2004; Girija et al. 2004), slightly longer than a typical C=N bond (1.283 (4) Å) (Bai & Jing, 2007); but much shorter than the single carbon-nitrogen bond (Table. 1), N1—C1=1.432 (3) Å because of the resonance. The carbon-carbon bond connecting the phenol and imine groups exhibits intermediate distances between a single and a double bond and agree well with those observed in other azomethines. The C5—N1—C14 and C14—C5—N1 bond angle of 117.70 (2)° and 117.47 () ° respectively in the Schiff base ligand are smaller than typical hexagonal of 120°. This is due to the effect of substitution on O of pyron & OH of the DHA ring.
In the crystal, molecules are aligned head to foot along b axis, in columns along to [0 0 1] axis and the structure is stabilized by an O—H···O hydrogen bond and another weak C—H···O interaction, leading to the formation of R55(32) rings extending parallel to the (101) plane (Fig. 2, Table.1).
For photochromic and thermochromic properties of hydroxy Schiff bases, see: Garnovskii et al. (1993); Hadjoudis et al. (2004). For potential materials for optical memory and switch devices, see: Zhao et al. (2007). For proton-transfer processes, see: Lussier et al. (1987). For Schiff base structures, see: Djedouani et al. (2007, 2008) For Schiff base bond lengths and angles, see: Girija & Begum (2004); Girija et al. (2004); Bai & Jing (2007).
Data collection: COLLECT (Nonius, 2002); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: EVALCCD (Duisenberg et al., 2003); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: olex2.refine (Dolomanov et al., 2009); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and Mercury (Macrae et al., 2006); software used to prepare material for publication: WinGX (Farrugia, 2012) and PARST (Nardelli, 1995).
C14H13NO4 | F(000) = 544.3271 |
Mr = 259.26 | Dx = 1.391 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 0 reflections |
a = 7.8730 (5) Å | θ = 2.9–27.5° |
b = 11.7930 (8) Å | µ = 0.10 mm−1 |
c = 13.5330 (8) Å | T = 293 K |
β = 99.896 (2)° | Block, yellow |
V = 1237.79 (14) Å3 | 0.10 × 0.06 × 0.03 mm |
Z = 4 |
Nonius KappaCCD diffractometer | 2582 independent reflections |
Radiation source: Enraf–Nonius FR590 | 2061 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.026 |
Detector resolution: 9 pixels mm-1 | θmax = 26.7°, θmin = 2.3° |
CCD rotation images, thin slices scans | h = −9→9 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2002) | k = −14→14 |
Tmin = 0.875, Tmax = 0.947 | l = −17→17 |
17976 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.047 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.148 | All H-atom parameters refined |
S = 1.07 | w = 1/[σ2(Fo2) + (0.0655P)2 + 0.6848P] where P = (Fo2 + 2Fc2)/3 |
2582 reflections | (Δ/σ)max = 0.005 |
173 parameters | Δρmax = 0.54 e Å−3 |
0 restraints | Δρmin = −0.38 e Å−3 |
C14H13NO4 | V = 1237.79 (14) Å3 |
Mr = 259.26 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.8730 (5) Å | µ = 0.10 mm−1 |
b = 11.7930 (8) Å | T = 293 K |
c = 13.5330 (8) Å | 0.10 × 0.06 × 0.03 mm |
β = 99.896 (2)° |
Nonius KappaCCD diffractometer | 2582 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 2002) | 2061 reflections with I > 2σ(I) |
Tmin = 0.875, Tmax = 0.947 | Rint = 0.026 |
17976 measured reflections |
R[F2 > 2σ(F2)] = 0.047 | 0 restraints |
wR(F2) = 0.148 | All H-atom parameters refined |
S = 1.07 | Δρmax = 0.54 e Å−3 |
2582 reflections | Δρmin = −0.38 e Å−3 |
173 parameters |
x | y | z | Uiso*/Ueq | ||
O1 | 0.6637 (2) | −0.08723 (12) | 0.50633 (10) | 0.0520 (4) | |
H1 | 0.6696 (2) | −0.05535 (12) | 0.45317 (10) | 0.0779 (6)* | |
O2 | 0.4993 (2) | 0.21003 (13) | −0.00201 (10) | 0.0543 (4) | |
H2 | 0.4624 (2) | 0.27519 (13) | −0.00450 (10) | 0.0815 (7)* | |
O3 | 1.0343 (3) | 0.20593 (17) | 0.65333 (13) | 0.0814 (7) | |
O4 | 0.92760 (19) | 0.08216 (12) | 0.74439 (9) | 0.0443 (4) | |
C1 | 0.6821 (3) | 0.11371 (17) | 0.29043 (13) | 0.0390 (4) | |
C2 | 0.7568 (3) | −0.07161 (18) | 0.67874 (15) | 0.0444 (5) | |
H2a | 0.7031 (3) | −0.13959 (18) | 0.68968 (15) | 0.0533 (6)* | |
C3 | 0.6279 (3) | 0.07382 (18) | 0.11415 (14) | 0.0433 (5) | |
H3 | 0.6333 (3) | 0.02421 (18) | 0.06136 (14) | 0.0520 (6)* | |
C4 | 0.7488 (3) | −0.03156 (16) | 0.57810 (14) | 0.0391 (4) | |
C5 | 0.8305 (3) | 0.12191 (16) | 0.46720 (14) | 0.0382 (4) | |
C6 | 0.6138 (3) | 0.22135 (17) | 0.27136 (14) | 0.0416 (5) | |
H6 | 0.6089 (3) | 0.27092 (17) | 0.32425 (14) | 0.0499 (6)* | |
C7 | 0.5531 (3) | 0.25514 (17) | 0.17428 (14) | 0.0416 (5) | |
H7 | 0.5074 (3) | 0.32751 (17) | 0.16191 (14) | 0.0499 (6)* | |
C8 | 0.8390 (3) | −0.01396 (17) | 0.75665 (14) | 0.0407 (5) | |
C9 | 0.9259 (3) | 0.22691 (19) | 0.44950 (16) | 0.0489 (5) | |
H9a | 0.9215 (18) | 0.2372 (8) | 0.37874 (17) | 0.0733 (8)* | |
H9b | 0.8738 (13) | 0.2909 (3) | 0.4764 (11) | 0.0733 (8)* | |
H9c | 1.0438 (6) | 0.2203 (6) | 0.4820 (10) | 0.0733 (8)* | |
C10 | 0.5598 (3) | 0.18172 (17) | 0.09476 (13) | 0.0389 (4) | |
C11 | 0.9398 (3) | 0.12553 (18) | 0.65006 (15) | 0.0454 (5) | |
C12 | 0.8492 (3) | −0.0416 (2) | 0.86465 (15) | 0.0554 (6) | |
H12a | 0.9678 (4) | −0.0434 (15) | 0.8967 (3) | 0.0831 (9)* | |
H12b | 0.789 (2) | 0.0151 (9) | 0.8959 (3) | 0.0831 (9)* | |
H12c | 0.797 (2) | −0.1144 (7) | 0.87109 (15) | 0.0831 (9)* | |
C13 | 0.6877 (3) | 0.03998 (17) | 0.21150 (15) | 0.0419 (5) | |
H13 | 0.7319 (3) | −0.03271 (17) | 0.22414 (15) | 0.0502 (6)* | |
C14 | 0.8397 (2) | 0.07122 (16) | 0.56378 (13) | 0.0368 (4) | |
N1 | 0.7321 (2) | 0.07168 (14) | 0.39048 (12) | 0.0434 (4) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0748 (11) | 0.0408 (8) | 0.0347 (7) | −0.0120 (7) | −0.0066 (7) | 0.0022 (6) |
O2 | 0.0822 (11) | 0.0507 (9) | 0.0265 (7) | 0.0122 (8) | −0.0009 (7) | 0.0018 (6) |
O3 | 0.1131 (16) | 0.0775 (13) | 0.0444 (9) | −0.0536 (12) | −0.0125 (9) | 0.0064 (9) |
O4 | 0.0563 (9) | 0.0434 (8) | 0.0295 (7) | −0.0021 (6) | −0.0029 (6) | −0.0003 (6) |
C1 | 0.0454 (11) | 0.0404 (10) | 0.0286 (9) | −0.0016 (8) | −0.0009 (7) | 0.0027 (8) |
C2 | 0.0565 (13) | 0.0373 (10) | 0.0383 (10) | −0.0024 (9) | 0.0051 (9) | 0.0042 (8) |
C3 | 0.0508 (12) | 0.0445 (11) | 0.0329 (10) | 0.0055 (9) | 0.0021 (8) | −0.0065 (8) |
C4 | 0.0466 (11) | 0.0347 (10) | 0.0332 (9) | 0.0032 (8) | −0.0009 (8) | −0.0006 (8) |
C5 | 0.0431 (10) | 0.0367 (10) | 0.0329 (9) | 0.0046 (8) | 0.0012 (8) | 0.0004 (8) |
C6 | 0.0557 (12) | 0.0394 (10) | 0.0290 (9) | 0.0000 (9) | 0.0052 (8) | −0.0029 (8) |
C7 | 0.0532 (12) | 0.0359 (10) | 0.0343 (10) | 0.0040 (9) | 0.0036 (8) | 0.0028 (8) |
C8 | 0.0475 (11) | 0.0389 (10) | 0.0346 (10) | 0.0077 (8) | 0.0046 (8) | 0.0027 (8) |
C9 | 0.0536 (13) | 0.0506 (12) | 0.0397 (11) | −0.0060 (10) | 0.0007 (9) | 0.0079 (9) |
C10 | 0.0451 (11) | 0.0425 (11) | 0.0275 (9) | 0.0004 (8) | 0.0018 (7) | 0.0032 (8) |
C11 | 0.0555 (13) | 0.0423 (11) | 0.0348 (10) | −0.0052 (10) | −0.0028 (9) | 0.0032 (8) |
C12 | 0.0773 (16) | 0.0557 (14) | 0.0329 (11) | 0.0044 (12) | 0.0088 (10) | 0.0034 (9) |
C13 | 0.0462 (11) | 0.0379 (10) | 0.0385 (10) | 0.0066 (8) | −0.0008 (8) | 0.0005 (8) |
C14 | 0.0439 (11) | 0.0336 (9) | 0.0306 (9) | 0.0029 (8) | −0.0002 (8) | 0.0021 (7) |
N1 | 0.0560 (10) | 0.0414 (9) | 0.0290 (8) | −0.0014 (8) | −0.0033 (7) | 0.0036 (7) |
O1—H1 | 0.82 | C5—C9 | 1.489 (3) |
O1—C4 | 1.265 (2) | C5—C14 | 1.428 (3) |
O2—H2 | 0.82 | C5—N1 | 1.324 (2) |
O2—C10 | 1.356 (2) | C6—H6 | 0.93 |
O3—C11 | 1.201 (3) | C6—C7 | 1.377 (3) |
O4—C8 | 1.356 (2) | C7—H7 | 0.93 |
O4—C11 | 1.394 (2) | C7—C10 | 1.389 (3) |
C1—C6 | 1.385 (3) | C8—C12 | 1.486 (3) |
C1—C13 | 1.384 (3) | C9—H9a | 0.96 |
C1—N1 | 1.432 (2) | C9—H9b | 0.96 |
C2—H2a | 0.93 | C9—H9c | 0.96 |
C2—C4 | 1.433 (3) | C11—C14 | 1.442 (3) |
C2—C8 | 1.326 (3) | C12—H12a | 0.96 |
C3—H3 | 0.93 | C12—H12b | 0.96 |
C3—C10 | 1.388 (3) | C12—H12c | 0.96 |
C3—C13 | 1.380 (3) | C13—H13 | 0.93 |
C4—C14 | 1.438 (3) | ||
C4—O1—H1 | 109.5 | C12—C8—C2 | 127.3 (2) |
C10—O2—H2 | 109.5 | H9a—C9—C5 | 109.5 |
C11—O4—C8 | 122.46 (15) | H9b—C9—C5 | 109.5 |
C13—C1—C6 | 119.66 (17) | H9b—C9—H9a | 109.5 |
N1—C1—C6 | 121.88 (17) | H9c—C9—C5 | 109.5 |
N1—C1—C13 | 118.18 (18) | H9c—C9—H9a | 109.5 |
C4—C2—H2a | 119.25 (12) | H9c—C9—H9b | 109.5 |
C8—C2—H2a | 119.25 (12) | C3—C10—O2 | 117.93 (17) |
C8—C2—C4 | 121.5 (2) | C7—C10—O2 | 122.75 (18) |
C10—C3—H3 | 119.90 (11) | C7—C10—C3 | 119.31 (17) |
C13—C3—H3 | 119.90 (12) | O4—C11—O3 | 113.30 (18) |
C13—C3—C10 | 120.19 (18) | C14—C11—O3 | 129.00 (19) |
C2—C4—O1 | 119.33 (18) | C14—C11—O4 | 117.69 (18) |
C14—C4—O1 | 122.99 (17) | H12a—C12—C8 | 109.5 |
C14—C4—C2 | 117.68 (17) | H12b—C12—C8 | 109.5 |
C14—C5—C9 | 123.23 (17) | H12b—C12—H12a | 109.5 |
N1—C5—C9 | 119.29 (17) | H12c—C12—C8 | 109.5 |
N1—C5—C14 | 117.48 (18) | H12c—C12—H12a | 109.5 |
H6—C6—C1 | 119.91 (11) | H12c—C12—H12b | 109.5 |
C7—C6—C1 | 120.17 (18) | C3—C13—C1 | 120.30 (18) |
C7—C6—H6 | 119.91 (12) | H13—C13—C1 | 119.85 (11) |
H7—C7—C6 | 119.82 (12) | H13—C13—C3 | 119.85 (12) |
C10—C7—C6 | 120.36 (18) | C5—C14—C4 | 121.89 (17) |
C10—C7—H7 | 119.82 (11) | C11—C14—C4 | 118.74 (17) |
C2—C8—O4 | 121.50 (18) | C11—C14—C5 | 119.35 (18) |
C12—C8—O4 | 111.21 (18) | C5—N1—C1 | 127.99 (17) |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.82 | 1.83 | 2.560 (2) | 147 |
O2—H2···O1i | 0.82 | 1.90 | 2.710 (2) | 169 |
C12—H12B···O3ii | 0.96 | 2.55 | 3.137 (3) | 120 |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) −x+2, y−1/2, −z+3/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1···N1 | 0.82 | 1.83 | 2.560 (2) | 147 |
O2—H2···O1i | 0.82 | 1.90 | 2.710 (2) | 169 |
C12—H12B···O3ii | 0.96 | 2.55 | 3.137 (3) | 120 |
Symmetry codes: (i) −x+1, y+1/2, −z+1/2; (ii) −x+2, y−1/2, −z+3/2. |
Hydroxy Schiff bases have been extensively studied due to their biological, photochromic and thermochromic properties (Garnovskii et al., 1993; Hadjoudis et al., 2004). They are potential materials for optical memory and switch devices (Zhao et al., 2007). Proton transfer in these compounds forms the basis for an explanation of the mechanisms of various biological processes where proton transfer is the rate-determining step (Lussier et al., 1987). In general, O-hydroxy Schiff bases exhibit two possible tautomeric forms, the phenol-imine (or benzenoid) and ketoamine (or quinoid) forms. Depending on the tautomers, two types of intra-molecular hydrogen bonds are possible: O—H···N in benzenoid and N—H···O in quinoid tautomers.
As part of our ongoing studies of Schiff bases (Djedouani et al., 2007, 2008), we now describe the synthesis and the structure of the title compound, which takes the form phenol-imine and complete a six-membered pseudocycle via an intramolecular O—H····O hydrogen bond.
The dehydroacetic acid ring and phenyl ring are almost planer with r.m.s deviation for the mean plane are 0.0260 and 0.0027 respectively. The dihedral angle between the two rings is 53.30 (0.05) °. The two torsional angles τ1 (N1—C5—C14—C4) and τ2 (C5—N1—C1—C6) defining the confirmation of the molecule.
The N1—C5 distance of 1.324 (2) Å agree with similar bond in related compounds (Girija & Begum, 2004; Girija et al. 2004), slightly longer than a typical C=N bond (1.283 (4) Å) (Bai & Jing, 2007); but much shorter than the single carbon-nitrogen bond (Table. 1), N1—C1=1.432 (3) Å because of the resonance. The carbon-carbon bond connecting the phenol and imine groups exhibits intermediate distances between a single and a double bond and agree well with those observed in other azomethines. The C5—N1—C14 and C14—C5—N1 bond angle of 117.70 (2)° and 117.47 () ° respectively in the Schiff base ligand are smaller than typical hexagonal of 120°. This is due to the effect of substitution on O of pyron & OH of the DHA ring.
In the crystal, molecules are aligned head to foot along b axis, in columns along to [0 0 1] axis and the structure is stabilized by an O—H···O hydrogen bond and another weak C—H···O interaction, leading to the formation of R55(32) rings extending parallel to the (101) plane (Fig. 2, Table.1).