The asymmetric unit of the binuclear title complex, [Hg
2Cl
4(C
17H
13N
5O
2)
2]·2C
3H
7NO, contains one-half of the centrosymmetric molecule and one dimethylformamide solvent molecule. The Hg
II atom is four-coordinated by two N atoms from two ligands and two Cl atoms in a distorted tetrahedral coordination geometry. Intramolecular N—H
O hydrogen bonds may be effective in the stabilization of the structure. In the crystal structure, π–π contacts between pyridine rings [centroid-to-centroid distances 3.629 (3) and 3.595 (3) Å] may further stabilize the structure.
Supporting information
CCDC reference: 717162
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C) = 0.005 Å
- R factor = 0.029
- wR factor = 0.054
- Data-to-parameter ratio = 15.2
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Hg1 -- Cl2 .. 12.73 su
Alert level C
Value of measurement temperature given = 294.000
Value of melting point given = 0.000
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Hg1 -- Cl1 .. 7.82 su
PLAT232_ALERT_2_C Hirshfeld Test Diff (M-X) Hg1 -- N5_a .. 5.26 su
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 3000 Deg.
0 ALERT level A = In general: serious problem
1 ALERT level B = Potentially serious problem
4 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
0 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
For the preparation of the title compound, the ligand
N,N'-bis-(pyridin-3-yl)-2,6-pyridinedicarboxamide (0.016 g,
0.05 mmol) in DMF (5 ml) was added dropwise to a solution of HgCl2 (0.028 g,
0.1 mmol) in methanol (5 ml). The precipitate was filtered and the resulting
solution was allowed to stand at room temperature in the dark. After one week
high quality colorless crystals were obtained and dried in air.
Data collection: CrystalClear (Rigaku/MSC, 2006); cell refinement: CrystalClear (Rigaku/MSC, 2006); data reduction: CrystalClear (Rigaku/MSC, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2003).
Bis(µ-
N,
N'-di-3-pyridylpyridine-2,6-
dicarboxamide)bis[dichloridomercury(II)]
N,
N-dimethylformamide disolvate
top
Crystal data top
[Hg2Cl4(C17H13N5O2)2]·2C3H7NO | Z = 1 |
Mr = 1327.82 | F(000) = 640 |
Triclinic, P1 | Dx = 1.951 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.4947 (15) Å | Cell parameters from 3289 reflections |
b = 12.262 (3) Å | θ = 2.9–26.0° |
c = 13.284 (3) Å | µ = 7.08 mm−1 |
α = 79.79 (3)° | T = 294 K |
β = 73.74 (3)° | Prism, colourless |
γ = 76.21 (3)° | 0.20 × 0.18 × 0.17 mm |
V = 1130.2 (5) Å3 | |
Data collection top
Rigaku Saturn 724 diffractometer | 4422 independent reflections |
Radiation source: fine-focus sealed tube | 3995 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
Detector resolution: 28.5714 pixels mm-1 | θmax = 26.0°, θmin = 2.9° |
dtprofit.ref scans | h = −9→9 |
Absorption correction: numerical (CrystalClear; Rigaku/MSC, 2006) | k = −15→15 |
Tmin = 0.332, Tmax = 0.379 | l = −16→16 |
12347 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.054 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.0195P)2 + 0.7349P] where P = (Fo2 + 2Fc2)/3 |
4422 reflections | (Δ/σ)max = 0.002 |
291 parameters | Δρmax = 0.65 e Å−3 |
0 restraints | Δρmin = −0.83 e Å−3 |
Crystal data top
[Hg2Cl4(C17H13N5O2)2]·2C3H7NO | γ = 76.21 (3)° |
Mr = 1327.82 | V = 1130.2 (5) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.4947 (15) Å | Mo Kα radiation |
b = 12.262 (3) Å | µ = 7.08 mm−1 |
c = 13.284 (3) Å | T = 294 K |
α = 79.79 (3)° | 0.20 × 0.18 × 0.17 mm |
β = 73.74 (3)° | |
Data collection top
Rigaku Saturn 724 diffractometer | 4422 independent reflections |
Absorption correction: numerical (CrystalClear; Rigaku/MSC, 2006) | 3995 reflections with I > 2σ(I) |
Tmin = 0.332, Tmax = 0.379 | Rint = 0.030 |
12347 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.029 | 0 restraints |
wR(F2) = 0.054 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.65 e Å−3 |
4422 reflections | Δρmin = −0.83 e Å−3 |
291 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s.
planes) are estimated using the full covariance matrix. The cell e.s.d.'s
are taken into account individually in the estimation of e.s.d.'s in
distances, angles and torsion angles; correlations between e.s.d.'s in
cell parameters are only used when they are defined by crystal symmetry.
An approximate (isotropic) treatment of cell e.s.d.'s is used for
estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted
R-factor wR and goodness of fit S are based
on F2, conventional R-factors R are based
on F, with F set to zero for negative F2.
The threshold expression of F2 > σ(F2) is used
only for calculating R-factors(gt) etc. and is not
relevant to the choice of reflections for refinement. R-factors
based on F2 are statistically about twice as large as those
based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Hg1 | 0.47943 (3) | 0.144664 (13) | 0.675659 (12) | 0.04821 (7) | |
Cl1 | 0.39934 (16) | −0.03890 (9) | 0.72493 (9) | 0.0566 (3) | |
Cl2 | 0.26095 (18) | 0.30392 (9) | 0.61184 (9) | 0.0611 (3) | |
O1 | 0.2543 (5) | 0.4774 (3) | 1.1235 (2) | 0.0738 (10) | |
O2 | −0.1219 (4) | 0.9357 (2) | 0.7985 (2) | 0.0511 (7) | |
O3 | 0.3641 (4) | 0.5771 (2) | 0.7182 (2) | 0.0546 (8) | |
N1 | 0.4906 (4) | 0.2103 (2) | 0.8281 (2) | 0.0358 (7) | |
N2 | 0.2824 (4) | 0.4689 (2) | 0.9507 (2) | 0.0337 (7) | |
H2A | 0.2584 | 0.5087 | 0.8941 | 0.040* | |
N3 | 0.1061 (4) | 0.6871 (2) | 0.9285 (2) | 0.0316 (7) | |
N4 | 0.0775 (4) | 0.7801 (2) | 0.7310 (2) | 0.0352 (7) | |
H4A | 0.1452 | 0.7151 | 0.7459 | 0.042* | |
N5 | 0.2361 (4) | 0.8435 (2) | 0.4443 (2) | 0.0387 (7) | |
N6 | 0.6833 (5) | 0.5377 (3) | 0.6475 (2) | 0.0417 (8) | |
C1 | 0.5503 (5) | 0.1381 (3) | 0.9066 (3) | 0.0387 (9) | |
H7 | 0.6118 | 0.0645 | 0.8944 | 0.046* | |
C2 | 0.5222 (5) | 0.1712 (3) | 1.0037 (3) | 0.0401 (9) | |
H8 | 0.5634 | 0.1198 | 1.0569 | 0.048* | |
C3 | 0.4326 (5) | 0.2808 (3) | 1.0236 (3) | 0.0388 (9) | |
H9 | 0.4124 | 0.3036 | 1.0897 | 0.047* | |
C4 | 0.3738 (5) | 0.3557 (3) | 0.9418 (3) | 0.0313 (8) | |
C5 | 0.4047 (5) | 0.3161 (3) | 0.8456 (3) | 0.0323 (8) | |
H11 | 0.3639 | 0.3654 | 0.7911 | 0.039* | |
C6 | 0.2281 (5) | 0.5222 (3) | 1.0382 (3) | 0.0385 (9) | |
C7 | 0.1299 (5) | 0.6438 (3) | 1.0247 (3) | 0.0315 (8) | |
C8 | 0.0694 (5) | 0.7050 (3) | 1.1103 (3) | 0.0419 (9) | |
H14 | 0.0886 | 0.6715 | 1.1759 | 0.050* | |
C9 | −0.0202 (5) | 0.8169 (3) | 1.0963 (3) | 0.0432 (9) | |
H15 | −0.0601 | 0.8607 | 1.1519 | 0.052* | |
C10 | −0.0493 (5) | 0.8622 (3) | 0.9980 (3) | 0.0384 (9) | |
H16 | −0.1121 | 0.9367 | 0.9867 | 0.046* | |
C11 | 0.0159 (5) | 0.7954 (3) | 0.9168 (3) | 0.0323 (8) | |
C12 | −0.0168 (5) | 0.8443 (3) | 0.8101 (3) | 0.0346 (8) | |
C13 | 0.0691 (5) | 0.8157 (3) | 0.6251 (3) | 0.0324 (8) | |
C14 | −0.1022 (5) | 0.8551 (3) | 0.5975 (3) | 0.0397 (9) | |
H20 | −0.2165 | 0.8604 | 0.6488 | 0.048* | |
C15 | −0.0995 (6) | 0.8861 (3) | 0.4925 (3) | 0.0437 (10) | |
H21 | −0.2127 | 0.9115 | 0.4720 | 0.052* | |
C16 | 0.0711 (6) | 0.8796 (3) | 0.4179 (3) | 0.0424 (10) | |
H22 | 0.0713 | 0.9010 | 0.3471 | 0.051* | |
C17 | 0.2348 (5) | 0.8112 (3) | 0.5462 (3) | 0.0341 (8) | |
H23 | 0.3500 | 0.7847 | 0.5645 | 0.041* | |
C18 | 0.8658 (6) | 0.5671 (4) | 0.6339 (4) | 0.0574 (12) | |
H24A | 0.9104 | 0.5982 | 0.5620 | 0.086* | |
H24B | 0.9552 | 0.5005 | 0.6504 | 0.086* | |
H24C | 0.8526 | 0.6220 | 0.6802 | 0.086* | |
C19 | 0.6793 (7) | 0.4444 (4) | 0.5953 (4) | 0.0645 (13) | |
H25A | 0.5525 | 0.4308 | 0.6137 | 0.097* | |
H25B | 0.7630 | 0.3778 | 0.6174 | 0.097* | |
H25C | 0.7196 | 0.4629 | 0.5202 | 0.097* | |
C20 | 0.5254 (6) | 0.5959 (3) | 0.7025 (3) | 0.0470 (10) | |
H26 | 0.5363 | 0.6565 | 0.7322 | 0.056* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Hg1 | 0.06800 (12) | 0.04056 (10) | 0.03301 (9) | −0.01143 (8) | −0.00684 (7) | −0.00492 (7) |
Cl1 | 0.0584 (7) | 0.0423 (6) | 0.0694 (7) | −0.0179 (5) | −0.0136 (6) | −0.0004 (5) |
Cl2 | 0.0773 (8) | 0.0504 (6) | 0.0618 (7) | −0.0063 (6) | −0.0364 (6) | −0.0009 (5) |
O1 | 0.125 (3) | 0.0519 (19) | 0.0363 (17) | 0.0185 (19) | −0.0330 (18) | −0.0114 (14) |
O2 | 0.0582 (18) | 0.0368 (15) | 0.0444 (16) | 0.0123 (14) | −0.0092 (14) | −0.0039 (13) |
O3 | 0.0463 (18) | 0.0508 (18) | 0.0482 (17) | 0.0070 (14) | 0.0008 (14) | −0.0013 (14) |
N1 | 0.0415 (18) | 0.0313 (16) | 0.0329 (16) | −0.0063 (14) | −0.0069 (14) | −0.0047 (13) |
N2 | 0.0470 (18) | 0.0270 (15) | 0.0231 (15) | 0.0000 (13) | −0.0109 (13) | 0.0006 (12) |
N3 | 0.0299 (15) | 0.0311 (16) | 0.0310 (16) | −0.0052 (13) | −0.0035 (13) | −0.0043 (13) |
N4 | 0.0411 (18) | 0.0278 (15) | 0.0287 (16) | 0.0016 (13) | −0.0053 (13) | −0.0002 (13) |
N5 | 0.050 (2) | 0.0323 (16) | 0.0319 (17) | −0.0067 (15) | −0.0090 (15) | −0.0024 (14) |
N6 | 0.050 (2) | 0.0349 (17) | 0.0342 (17) | −0.0052 (15) | −0.0043 (15) | −0.0021 (14) |
C1 | 0.039 (2) | 0.0321 (19) | 0.040 (2) | −0.0018 (16) | −0.0055 (17) | −0.0050 (17) |
C2 | 0.044 (2) | 0.036 (2) | 0.037 (2) | −0.0031 (17) | −0.0159 (18) | 0.0055 (17) |
C3 | 0.050 (2) | 0.036 (2) | 0.031 (2) | −0.0041 (18) | −0.0150 (18) | −0.0041 (16) |
C4 | 0.0338 (19) | 0.0305 (18) | 0.0276 (18) | −0.0051 (15) | −0.0075 (15) | −0.0006 (15) |
C5 | 0.042 (2) | 0.0294 (18) | 0.0243 (18) | −0.0056 (16) | −0.0101 (15) | 0.0007 (15) |
C6 | 0.044 (2) | 0.041 (2) | 0.029 (2) | −0.0039 (18) | −0.0095 (17) | −0.0072 (17) |
C7 | 0.0316 (19) | 0.0341 (19) | 0.0273 (18) | −0.0065 (15) | −0.0045 (15) | −0.0045 (15) |
C8 | 0.045 (2) | 0.051 (2) | 0.029 (2) | −0.0106 (19) | −0.0050 (17) | −0.0096 (18) |
C9 | 0.048 (2) | 0.044 (2) | 0.037 (2) | −0.0104 (19) | 0.0008 (18) | −0.0206 (18) |
C10 | 0.037 (2) | 0.034 (2) | 0.043 (2) | −0.0042 (16) | −0.0050 (17) | −0.0120 (17) |
C11 | 0.0293 (18) | 0.0325 (19) | 0.0319 (19) | −0.0071 (15) | −0.0004 (15) | −0.0063 (16) |
C12 | 0.033 (2) | 0.032 (2) | 0.035 (2) | −0.0030 (16) | −0.0058 (16) | −0.0025 (16) |
C13 | 0.039 (2) | 0.0212 (17) | 0.035 (2) | −0.0014 (15) | −0.0110 (16) | −0.0010 (15) |
C14 | 0.039 (2) | 0.0318 (19) | 0.048 (2) | −0.0065 (17) | −0.0102 (18) | −0.0053 (17) |
C15 | 0.051 (2) | 0.0291 (19) | 0.059 (3) | −0.0043 (18) | −0.030 (2) | −0.0036 (19) |
C16 | 0.064 (3) | 0.029 (2) | 0.040 (2) | −0.0092 (19) | −0.024 (2) | −0.0007 (17) |
C17 | 0.039 (2) | 0.0298 (18) | 0.0311 (19) | −0.0017 (16) | −0.0099 (16) | −0.0016 (15) |
C18 | 0.058 (3) | 0.059 (3) | 0.054 (3) | −0.019 (2) | −0.013 (2) | 0.005 (2) |
C19 | 0.058 (3) | 0.053 (3) | 0.074 (3) | −0.016 (2) | 0.010 (2) | −0.024 (2) |
C20 | 0.064 (3) | 0.036 (2) | 0.033 (2) | 0.003 (2) | −0.012 (2) | −0.0016 (17) |
Geometric parameters (Å, º) top
Hg1—N5i | 2.295 (3) | C3—H9 | 0.9300 |
Hg1—N1 | 2.337 (3) | C4—C5 | 1.387 (5) |
Hg1—Cl1 | 2.3994 (12) | C5—H11 | 0.9300 |
Hg1—Cl2 | 2.4249 (14) | C6—C7 | 1.501 (5) |
O1—C6 | 1.215 (4) | C7—C8 | 1.383 (5) |
O2—C12 | 1.219 (4) | C8—C9 | 1.381 (5) |
O3—C20 | 1.238 (5) | C8—H14 | 0.9300 |
N1—C5 | 1.333 (4) | C9—C10 | 1.381 (5) |
N1—C1 | 1.348 (5) | C9—H15 | 0.9300 |
N2—C6 | 1.349 (4) | C10—C11 | 1.378 (5) |
N2—C4 | 1.404 (4) | C10—H16 | 0.9300 |
N2—H2A | 0.8600 | C11—C12 | 1.501 (5) |
N3—C7 | 1.338 (4) | C13—C17 | 1.379 (5) |
N3—C11 | 1.343 (4) | C13—C14 | 1.386 (5) |
N4—C12 | 1.354 (4) | C14—C15 | 1.374 (5) |
N4—C13 | 1.412 (4) | C14—H20 | 0.9300 |
N4—H4A | 0.8600 | C15—C16 | 1.377 (6) |
N5—C16 | 1.332 (5) | C15—H21 | 0.9300 |
N5—C17 | 1.340 (4) | C16—H22 | 0.9300 |
N5—Hg1i | 2.295 (3) | C17—H23 | 0.9300 |
N6—C20 | 1.320 (5) | C18—H24A | 0.9600 |
N6—C19 | 1.449 (5) | C18—H24B | 0.9600 |
N6—C18 | 1.451 (5) | C18—H24C | 0.9600 |
C1—C2 | 1.365 (5) | C19—H25A | 0.9600 |
C1—H7 | 0.9300 | C19—H25B | 0.9600 |
C2—C3 | 1.387 (5) | C19—H25C | 0.9600 |
C2—H8 | 0.9300 | C20—H26 | 0.9300 |
C3—C4 | 1.392 (5) | | |
| | | |
N5i—Hg1—N1 | 106.50 (11) | C9—C8—H14 | 120.7 |
N5i—Hg1—Cl1 | 117.02 (8) | C7—C8—H14 | 120.7 |
N1—Hg1—Cl1 | 108.03 (8) | C10—C9—C8 | 118.6 (4) |
N5i—Hg1—Cl2 | 103.20 (9) | C10—C9—H15 | 120.7 |
N1—Hg1—Cl2 | 99.40 (8) | C8—C9—H15 | 120.7 |
Cl1—Hg1—Cl2 | 120.60 (4) | C11—C10—C9 | 119.1 (4) |
C5—N1—C1 | 119.2 (3) | C11—C10—H16 | 120.5 |
C5—N1—Hg1 | 118.8 (2) | C9—C10—H16 | 120.5 |
C1—N1—Hg1 | 120.8 (2) | N3—C11—C10 | 123.2 (3) |
C6—N2—C4 | 127.2 (3) | N3—C11—C12 | 117.7 (3) |
C6—N2—H2A | 116.4 | C10—C11—C12 | 119.1 (3) |
C4—N2—H2A | 116.4 | O2—C12—N4 | 124.1 (3) |
C7—N3—C11 | 117.0 (3) | O2—C12—C11 | 120.6 (3) |
C12—N4—C13 | 122.6 (3) | N4—C12—C11 | 115.3 (3) |
C12—N4—H4A | 118.7 | C17—C13—C14 | 118.5 (3) |
C13—N4—H4A | 118.7 | C17—C13—N4 | 119.7 (3) |
C16—N5—C17 | 118.8 (3) | C14—C13—N4 | 121.8 (3) |
C16—N5—Hg1i | 122.1 (2) | C15—C14—C13 | 118.6 (4) |
C17—N5—Hg1i | 118.7 (2) | C15—C14—H20 | 120.7 |
C20—N6—C19 | 120.9 (4) | C13—C14—H20 | 120.7 |
C20—N6—C18 | 121.5 (4) | C14—C15—C16 | 119.9 (4) |
C19—N6—C18 | 117.6 (3) | C14—C15—H21 | 120.1 |
N1—C1—C2 | 121.1 (3) | C16—C15—H21 | 120.1 |
N1—C1—H7 | 119.4 | N5—C16—C15 | 121.8 (4) |
C2—C1—H7 | 119.4 | N5—C16—H22 | 119.1 |
C1—C2—C3 | 120.6 (3) | C15—C16—H22 | 119.1 |
C1—C2—H8 | 119.7 | N5—C17—C13 | 122.5 (3) |
C3—C2—H8 | 119.7 | N5—C17—H23 | 118.8 |
C2—C3—C4 | 118.1 (3) | C13—C17—H23 | 118.8 |
C2—C3—H9 | 120.9 | N6—C18—H24A | 109.5 |
C4—C3—H9 | 120.9 | N6—C18—H24B | 109.5 |
C5—C4—C3 | 118.3 (3) | H24A—C18—H24B | 109.5 |
C5—C4—N2 | 117.5 (3) | N6—C18—H24C | 109.5 |
C3—C4—N2 | 124.2 (3) | H24A—C18—H24C | 109.5 |
N1—C5—C4 | 122.6 (3) | H24B—C18—H24C | 109.5 |
N1—C5—H11 | 118.7 | N6—C19—H25A | 109.5 |
C4—C5—H11 | 118.7 | N6—C19—H25B | 109.5 |
O1—C6—N2 | 123.9 (4) | H25A—C19—H25B | 109.5 |
O1—C6—C7 | 120.5 (3) | N6—C19—H25C | 109.5 |
N2—C6—C7 | 115.5 (3) | H25A—C19—H25C | 109.5 |
N3—C7—C8 | 123.5 (3) | H25B—C19—H25C | 109.5 |
N3—C7—C6 | 117.1 (3) | O3—C20—N6 | 126.0 (4) |
C8—C7—C6 | 119.5 (3) | O3—C20—H26 | 117.0 |
C9—C8—C7 | 118.7 (4) | N6—C20—H26 | 117.0 |
| | | |
N5i—Hg1—N1—C5 | 99.7 (3) | C6—C7—C8—C9 | 179.8 (3) |
Cl1—Hg1—N1—C5 | −133.8 (2) | C7—C8—C9—C10 | 1.4 (6) |
Cl2—Hg1—N1—C5 | −7.2 (3) | C8—C9—C10—C11 | −1.6 (6) |
N5i—Hg1—N1—C1 | −92.7 (3) | C7—N3—C11—C10 | 0.7 (5) |
Cl1—Hg1—N1—C1 | 33.8 (3) | C7—N3—C11—C12 | −178.3 (3) |
Cl2—Hg1—N1—C1 | 160.5 (3) | C9—C10—C11—N3 | 0.6 (6) |
C5—N1—C1—C2 | 0.9 (6) | C9—C10—C11—C12 | 179.6 (3) |
Hg1—N1—C1—C2 | −166.7 (3) | C13—N4—C12—O2 | 2.8 (6) |
N1—C1—C2—C3 | −0.7 (6) | C13—N4—C12—C11 | −177.2 (3) |
C1—C2—C3—C4 | −0.4 (6) | N3—C11—C12—O2 | 168.8 (3) |
C2—C3—C4—C5 | 1.2 (5) | C10—C11—C12—O2 | −10.3 (5) |
C2—C3—C4—N2 | −179.7 (3) | N3—C11—C12—N4 | −11.2 (5) |
C6—N2—C4—C5 | 175.5 (4) | C10—C11—C12—N4 | 169.7 (3) |
C6—N2—C4—C3 | −3.6 (6) | C12—N4—C13—C17 | 129.3 (4) |
C1—N1—C5—C4 | 0.0 (5) | C12—N4—C13—C14 | −51.0 (5) |
Hg1—N1—C5—C4 | 167.8 (3) | C17—C13—C14—C15 | 1.0 (5) |
C3—C4—C5—N1 | −1.0 (5) | N4—C13—C14—C15 | −178.7 (3) |
N2—C4—C5—N1 | 179.8 (3) | C13—C14—C15—C16 | −1.2 (5) |
C4—N2—C6—O1 | 0.8 (7) | C17—N5—C16—C15 | 1.1 (5) |
C4—N2—C6—C7 | −179.0 (3) | Hg1i—N5—C16—C15 | −171.3 (3) |
C11—N3—C7—C8 | −0.9 (5) | C14—C15—C16—N5 | 0.1 (6) |
C11—N3—C7—C6 | 179.1 (3) | C16—N5—C17—C13 | −1.2 (5) |
O1—C6—C7—N3 | −179.9 (4) | Hg1i—N5—C17—C13 | 171.4 (3) |
N2—C6—C7—N3 | 0.0 (5) | C14—C13—C17—N5 | 0.1 (5) |
O1—C6—C7—C8 | 0.1 (6) | N4—C13—C17—N5 | 179.9 (3) |
N2—C6—C7—C8 | −180.0 (3) | C19—N6—C20—O3 | 2.2 (6) |
N3—C7—C8—C9 | −0.1 (6) | C18—N6—C20—O3 | 179.9 (4) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O3 | 0.86 | 2.32 | 3.090 (4) | 149 |
N2—H2A···N3 | 0.86 | 2.27 | 2.692 (2) | 110 |
N4—H4A···O3 | 0.86 | 2.06 | 2.870 (4) | 156 |
N4—H4A···N3 | 0.86 | 2.33 | 2.714 (3) | 107 |
Experimental details
Crystal data |
Chemical formula | [Hg2Cl4(C17H13N5O2)2]·2C3H7NO |
Mr | 1327.82 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 294 |
a, b, c (Å) | 7.4947 (15), 12.262 (3), 13.284 (3) |
α, β, γ (°) | 79.79 (3), 73.74 (3), 76.21 (3) |
V (Å3) | 1130.2 (5) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 7.08 |
Crystal size (mm) | 0.20 × 0.18 × 0.17 |
|
Data collection |
Diffractometer | Rigaku Saturn 724 diffractometer |
Absorption correction | Numerical (CrystalClear; Rigaku/MSC, 2006) |
Tmin, Tmax | 0.332, 0.379 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 12347, 4422, 3995 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.617 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.054, 1.03 |
No. of reflections | 4422 |
No. of parameters | 291 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.65, −0.83 |
Selected geometric parameters (Å, º) topHg1—N5i | 2.295 (3) | Hg1—Cl1 | 2.3994 (12) |
Hg1—N1 | 2.337 (3) | Hg1—Cl2 | 2.4249 (14) |
| | | |
N5i—Hg1—N1 | 106.50 (11) | N5i—Hg1—Cl2 | 103.20 (9) |
N5i—Hg1—Cl1 | 117.02 (8) | N1—Hg1—Cl2 | 99.40 (8) |
N1—Hg1—Cl1 | 108.03 (8) | Cl1—Hg1—Cl2 | 120.60 (4) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2A···O3 | 0.86 | 2.32 | 3.090 (4) | 149 |
N2—H2A···N3 | 0.86 | 2.27 | 2.692 (2) | 110 |
N4—H4A···O3 | 0.86 | 2.06 | 2.870 (4) | 156 |
N4—H4A···N3 | 0.86 | 2.33 | 2.714 (3) | 107 |
The expansion of the field of metal–organic frameworks (MOFs) of predetermined structure depends on the judicious choice of new linkers and nodes of appropriate coordination algorithms (Ockwig et al., 2005). Rigid polydentate N-donor ligands are typical linkers employed in such a work. N,N'-bis(pyridin-3-yl)-2,6-pyridinedicarboxamide, with a rigid conjugated clamp-like configuration, is a convenient bridging ligand for the syntheses of cyclic complexes (Qin et al., 2003; Baer et al., 2002). In this work, we selected this ligand as linker, to generate the new title coordination complex, and we report herein its crystal structure.
The asymmetric unit of the title compound (Fig. 1) contains one-half molecule and an N,N-dimethylformamide (DMF) molecule, where the bond lengths (Allen et al., 1987) and angles are within normal ranges. The HgII atom is four-coordinated by two N atoms from two ligands and two Cl atoms in a distorted tetrahedral coordination geometry (Table 1). The two HgII atoms are bridged with two N,N'-bis(pyridin-3-yl)-2,6-pyridinedicarboxamide ligands to form a porous MOF with 28-membered macroring. The pyridine rings A (N1/C1–C5), B (N3/C7–C11) and C (N5/C13–C17) are oriented at dihedral angles of A/B = 3.31 (3)°, A/C = 62.29 (3)° and B/C = 60.76 (3)°. The intramolecular N—H···O hydrogen bonds (Table 2, Fig. 1) may be effective in the stabilization of the structure.
In the crystal structure, the π–π contacts between the pyridine rings, Cg1—Cg2i and Cg3—Cg3ii [symmetry codes: (i) 2 - x, 1 - y, -z; (ii) -x, 2 - y, 1 - z, where Cg1, Cg2 and Cg3 are centroids of the rings A (N1/C1–C5), B (N3/C7–C11) and C (N5/C13–C17), respectively] may further stabilize the structure, with centroid–centroid distances of 3.629 (3) Å and 3.595 (3) Å.