Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536808036301/hk2567sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536808036301/hk2567Isup2.hkl |
CCDC reference: 712443
Key indicators
- Single-crystal X-ray study
- T = 223 K
- Mean (C-C) = 0.002 Å
- R factor = 0.040
- wR factor = 0.111
- Data-to-parameter ratio = 22.0
checkCIF/PLATON results
No syntax errors found
Alert level C Value of measurement temperature given = 223.000 Value of melting point given = 0.000 PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.72
Alert level G PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 3
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of 3,4,5-trimethoxybenzohydrazide (0.01 mol) and ethyl acetoacetate (0.01 mol) was refluxed in methanol (25 ml), containing concentrated hydrochloric acid (1 ml) for 8 h in a water-bath. The resulting solution was then concentrated and cooled at room temperature. The solid thus separated was washed with methanol, dried and recrystallized with acetone. Anal. calcd. for C10H15ClN2O4: C 45.72, H 5.76, N 10.66%; found: C 45.57, H 5.64, N 10.69%.
H1 atom (for NH) was located in difference synthesis and refined isotropically [N-H = 0.876 (19) Å and Uiso(H) = 0.039 (5) Å2]. The remaining H atoms were positioned geometrically, with N-H = 0.90 Å (for NH3) and C-H = 0.94 and 0.97 Å for aromatic and metyl H, respectively, and constrained to ride on their parent atoms with Uiso(H) = xUeq(C,N), where x = 1.2 for aromatic H and x = 1.5 for all other H atoms.
Data collection: PROCESS-AUTO (Rigaku/MSC, 2004); cell refinement: PROCESS-AUTO (Rigaku/MSC, 2004); data reduction: CrystalStructure (Rigaku/MSC, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2004) and PLATON (Spek, 2003).
C10H15N2O4+·Cl− | F(000) = 1104.00 |
Mr = 262.69 | Dx = 1.455 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71075 Å |
Hall symbol: -C 2yc | Cell parameters from 12804 reflections |
a = 38.587 (3) Å | θ = 3.0–30.0° |
b = 4.8202 (3) Å | µ = 0.32 mm−1 |
c = 13.5915 (10) Å | T = 223 K |
β = 108.459 (2)° | Platelet, colorless |
V = 2397.9 (3) Å3 | 0.29 × 0.28 × 0.05 mm |
Z = 8 |
Rigaku R-AXIS RAPIDII diffractometer | 2987 reflections with I > 2σ(I) |
Detector resolution: 10.00 pixels mm-1 | Rint = 0.035 |
ω scans | θmax = 30.0° |
Absorption correction: numerical (ABSCOR; Higashi, 1999) | h = −54→50 |
Tmin = 0.930, Tmax = 0.984 | k = −6→6 |
15536 measured reflections | l = −19→19 |
3483 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.040 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0672P)2 + 0.9082P] where P = (Fo2 + 2Fc2)/3 |
3483 reflections | (Δ/σ)max = 0.003 |
158 parameters | Δρmax = 0.51 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
C10H15N2O4+·Cl− | V = 2397.9 (3) Å3 |
Mr = 262.69 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 38.587 (3) Å | µ = 0.32 mm−1 |
b = 4.8202 (3) Å | T = 223 K |
c = 13.5915 (10) Å | 0.29 × 0.28 × 0.05 mm |
β = 108.459 (2)° |
Rigaku R-AXIS RAPIDII diffractometer | 3483 independent reflections |
Absorption correction: numerical (ABSCOR; Higashi, 1999) | 2987 reflections with I > 2σ(I) |
Tmin = 0.930, Tmax = 0.984 | Rint = 0.035 |
15536 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | 0 restraints |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.51 e Å−3 |
3483 reflections | Δρmin = −0.19 e Å−3 |
158 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | 0.531194 (8) | 0.74543 (6) | 0.14789 (2) | 0.02591 (11) | |
O1 | 0.29508 (2) | −0.1702 (2) | 0.04400 (7) | 0.0261 (2) | |
O2 | 0.29359 (2) | 0.12014 (18) | 0.20875 (7) | 0.02407 (19) | |
O3 | 0.35072 (3) | 0.4308 (2) | 0.31676 (7) | 0.0301 (2) | |
O4 | 0.43237 (2) | −0.16714 (18) | 0.07270 (7) | 0.02515 (19) | |
N1 | 0.44683 (3) | 0.2704 (2) | 0.12743 (9) | 0.0220 (2) | |
N2 | 0.47777 (3) | 0.24854 (19) | 0.09232 (9) | 0.0222 (2) | |
H2NA | 0.4900 | 0.0916 | 0.1173 | 0.033* | |
H2NB | 0.4925 | 0.3956 | 0.1150 | 0.033* | |
H2NC | 0.4703 | 0.2446 | 0.0225 | 0.033* | |
C1 | 0.38998 (3) | 0.0818 (2) | 0.13600 (9) | 0.0198 (2) | |
C2 | 0.35979 (3) | −0.0716 (2) | 0.07763 (9) | 0.0207 (2) | |
H2 | 0.3616 | −0.1909 | 0.0248 | 0.025* | |
C3 | 0.32687 (3) | −0.0453 (2) | 0.09891 (8) | 0.0204 (2) | |
C4 | 0.32509 (3) | 0.1212 (2) | 0.18165 (9) | 0.0209 (2) | |
C5 | 0.35556 (3) | 0.2748 (2) | 0.23870 (9) | 0.0217 (2) | |
C6 | 0.38830 (3) | 0.2592 (2) | 0.21544 (9) | 0.0212 (2) | |
H6 | 0.4087 | 0.3656 | 0.2524 | 0.025* | |
C7 | 0.42422 (3) | 0.0465 (2) | 0.10930 (8) | 0.0189 (2) | |
C8 | 0.29543 (4) | −0.3376 (3) | −0.04212 (10) | 0.0302 (3) | |
H8A | 0.3035 | −0.2270 | −0.0904 | 0.045* | |
H8B | 0.2710 | −0.4073 | −0.0767 | 0.045* | |
H8C | 0.3120 | −0.4923 | −0.0179 | 0.045* | |
C9 | 0.27160 (4) | 0.3649 (3) | 0.17816 (11) | 0.0297 (3) | |
H9A | 0.2862 | 0.5274 | 0.2066 | 0.045* | |
H9B | 0.2509 | 0.3552 | 0.2041 | 0.045* | |
H9C | 0.2628 | 0.3775 | 0.1031 | 0.045* | |
C10 | 0.38005 (4) | 0.6091 (3) | 0.37142 (10) | 0.0311 (3) | |
H10A | 0.4011 | 0.4981 | 0.4084 | 0.047* | |
H10B | 0.3726 | 0.7210 | 0.4205 | 0.047* | |
H10C | 0.3864 | 0.7294 | 0.3225 | 0.047* | |
H1 | 0.4380 (5) | 0.439 (4) | 0.1231 (14) | 0.039 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.02223 (16) | 0.02581 (17) | 0.02881 (17) | −0.00046 (9) | 0.00682 (12) | −0.00128 (10) |
O1 | 0.0225 (4) | 0.0335 (5) | 0.0239 (4) | −0.0077 (3) | 0.0095 (3) | −0.0079 (4) |
O2 | 0.0240 (4) | 0.0253 (4) | 0.0279 (4) | −0.0016 (3) | 0.0153 (3) | 0.0007 (3) |
O3 | 0.0292 (4) | 0.0377 (5) | 0.0280 (4) | −0.0087 (4) | 0.0158 (4) | −0.0148 (4) |
O4 | 0.0266 (4) | 0.0200 (4) | 0.0313 (5) | −0.0006 (3) | 0.0127 (4) | −0.0037 (3) |
N1 | 0.0220 (5) | 0.0169 (5) | 0.0317 (5) | −0.0004 (3) | 0.0149 (4) | −0.0014 (4) |
N2 | 0.0214 (5) | 0.0202 (5) | 0.0280 (5) | −0.0019 (3) | 0.0122 (4) | −0.0009 (4) |
C1 | 0.0209 (5) | 0.0190 (5) | 0.0213 (5) | 0.0004 (4) | 0.0092 (4) | 0.0015 (4) |
C2 | 0.0234 (5) | 0.0199 (5) | 0.0208 (5) | −0.0012 (4) | 0.0099 (4) | −0.0010 (4) |
C3 | 0.0218 (5) | 0.0207 (5) | 0.0195 (5) | −0.0028 (4) | 0.0074 (4) | 0.0005 (4) |
C4 | 0.0216 (5) | 0.0228 (5) | 0.0213 (5) | −0.0010 (4) | 0.0109 (4) | 0.0008 (4) |
C5 | 0.0246 (6) | 0.0229 (5) | 0.0199 (5) | −0.0010 (4) | 0.0103 (4) | −0.0022 (4) |
C6 | 0.0216 (5) | 0.0215 (5) | 0.0217 (5) | −0.0025 (4) | 0.0086 (4) | −0.0020 (4) |
C7 | 0.0202 (5) | 0.0180 (5) | 0.0186 (5) | 0.0010 (4) | 0.0062 (4) | 0.0019 (4) |
C8 | 0.0284 (6) | 0.0371 (7) | 0.0255 (6) | −0.0072 (5) | 0.0092 (5) | −0.0091 (5) |
C9 | 0.0275 (6) | 0.0294 (6) | 0.0358 (7) | 0.0029 (5) | 0.0152 (5) | 0.0030 (5) |
C10 | 0.0328 (6) | 0.0344 (7) | 0.0274 (6) | −0.0074 (5) | 0.0112 (5) | −0.0118 (5) |
O1—C3 | 1.3581 (14) | C2—C3 | 1.3950 (15) |
O1—C8 | 1.4251 (15) | C2—H2 | 0.9400 |
O2—C4 | 1.3771 (13) | C3—C4 | 1.4009 (15) |
O2—C9 | 1.4356 (16) | C4—C5 | 1.3982 (16) |
O3—C5 | 1.3605 (14) | C5—C6 | 1.3981 (16) |
O3—C10 | 1.4280 (15) | C6—H6 | 0.9400 |
O4—C7 | 1.2271 (14) | C8—H8A | 0.9700 |
N1—C7 | 1.3602 (14) | C8—H8B | 0.9700 |
N1—N2 | 1.4230 (13) | C8—H8C | 0.9700 |
N1—H1 | 0.876 (19) | C9—H9A | 0.9700 |
N2—H2NA | 0.9000 | C9—H9B | 0.9700 |
N2—H2NB | 0.9000 | C9—H9C | 0.9700 |
N2—H2NC | 0.9000 | C10—H10A | 0.9700 |
C1—C6 | 1.3947 (15) | C10—H10B | 0.9700 |
C1—C2 | 1.3958 (15) | C10—H10C | 0.9700 |
C1—C7 | 1.4867 (15) | ||
C3—O1—C8 | 117.43 (9) | C4—C5—C6 | 120.52 (10) |
C4—O2—C9 | 114.20 (9) | C1—C6—C5 | 118.34 (10) |
C5—O3—C10 | 117.16 (9) | C1—C6—H6 | 120.8 |
C7—N1—N2 | 116.00 (9) | C5—C6—H6 | 120.8 |
C7—N1—H1 | 120.7 (11) | O4—C7—N1 | 120.50 (10) |
N2—N1—H1 | 113.3 (11) | O4—C7—C1 | 123.82 (10) |
N1—N2—H2NA | 109.5 | N1—C7—C1 | 115.68 (10) |
N1—N2—H2NB | 109.5 | O1—C8—H8A | 109.5 |
H2NA—N2—H2NB | 109.5 | O1—C8—H8B | 109.5 |
N1—N2—H2NC | 109.5 | H8A—C8—H8B | 109.5 |
H2NA—N2—H2NC | 109.5 | O1—C8—H8C | 109.5 |
H2NB—N2—H2NC | 109.5 | H8A—C8—H8C | 109.5 |
C6—C1—C2 | 121.99 (10) | H8B—C8—H8C | 109.5 |
C6—C1—C7 | 121.46 (10) | O2—C9—H9A | 109.5 |
C2—C1—C7 | 116.55 (10) | O2—C9—H9B | 109.5 |
C3—C2—C1 | 119.01 (10) | H9A—C9—H9B | 109.5 |
C3—C2—H2 | 120.5 | O2—C9—H9C | 109.5 |
C1—C2—H2 | 120.5 | H9A—C9—H9C | 109.5 |
O1—C3—C2 | 124.68 (10) | H9B—C9—H9C | 109.5 |
O1—C3—C4 | 115.46 (10) | O3—C10—H10A | 109.5 |
C2—C3—C4 | 119.86 (10) | O3—C10—H10B | 109.5 |
O2—C4—C5 | 120.82 (10) | H10A—C10—H10B | 109.5 |
O2—C4—C3 | 118.97 (10) | O3—C10—H10C | 109.5 |
C5—C4—C3 | 120.13 (10) | H10A—C10—H10C | 109.5 |
O3—C5—C4 | 115.21 (10) | H10B—C10—H10C | 109.5 |
O3—C5—C6 | 124.26 (11) | ||
C6—C1—C2—C3 | 0.46 (17) | O2—C4—C5—O3 | −3.67 (16) |
C7—C1—C2—C3 | −179.61 (10) | C3—C4—C5—O3 | 179.53 (10) |
C8—O1—C3—C2 | −0.71 (17) | O2—C4—C5—C6 | 175.34 (10) |
C8—O1—C3—C4 | 178.87 (11) | C3—C4—C5—C6 | −1.46 (17) |
C1—C2—C3—O1 | 175.98 (10) | C2—C1—C6—C5 | 2.13 (17) |
C1—C2—C3—C4 | −3.58 (16) | C7—C1—C6—C5 | −177.79 (10) |
C9—O2—C4—C5 | 77.58 (14) | O3—C5—C6—C1 | 177.30 (11) |
C9—O2—C4—C3 | −105.59 (12) | C4—C5—C6—C1 | −1.62 (17) |
O1—C3—C4—O2 | 7.64 (15) | N2—N1—C7—O4 | 5.88 (16) |
C2—C3—C4—O2 | −172.76 (10) | N2—N1—C7—C1 | −173.78 (10) |
O1—C3—C4—C5 | −175.50 (10) | C6—C1—C7—O4 | 150.77 (11) |
C2—C3—C4—C5 | 4.09 (17) | C2—C1—C7—O4 | −29.15 (16) |
C10—O3—C5—C4 | −174.81 (11) | C6—C1—C7—N1 | −29.58 (15) |
C10—O3—C5—C6 | 6.22 (18) | C2—C1—C7—N1 | 150.50 (11) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O4i | 0.876 (19) | 2.007 (19) | 2.8200 (13) | 154.0 (18) |
N2—H2NA···Cl1ii | 0.90 | 2.25 | 3.1169 (11) | 162 |
N2—H2NB···Cl1 | 0.90 | 2.20 | 3.0937 (11) | 171 |
N2—H2NC···Cl1iii | 0.90 | 2.30 | 3.1724 (12) | 164 |
Symmetry codes: (i) x, y+1, z; (ii) x, y−1, z; (iii) −x+1, −y+1, −z. |
Experimental details
Crystal data | |
Chemical formula | C10H15N2O4+·Cl− |
Mr | 262.69 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 223 |
a, b, c (Å) | 38.587 (3), 4.8202 (3), 13.5915 (10) |
β (°) | 108.459 (2) |
V (Å3) | 2397.9 (3) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 0.32 |
Crystal size (mm) | 0.29 × 0.28 × 0.05 |
Data collection | |
Diffractometer | Rigaku R-AXIS RAPIDII diffractometer |
Absorption correction | Numerical (ABSCOR; Higashi, 1999) |
Tmin, Tmax | 0.930, 0.984 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 15536, 3483, 2987 |
Rint | 0.035 |
(sin θ/λ)max (Å−1) | 0.703 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.111, 1.06 |
No. of reflections | 3483 |
No. of parameters | 158 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.51, −0.19 |
Computer programs: PROCESS-AUTO (Rigaku/MSC, 2004), CrystalStructure (Rigaku/MSC, 2004), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 (Farrugia, 1997), CrystalStructure (Rigaku/MSC, 2004) and PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O4i | 0.876 (19) | 2.007 (19) | 2.8200 (13) | 154.0 (18) |
N2—H2NA···Cl1ii | 0.90 | 2.25 | 3.1169 (11) | 162 |
N2—H2NB···Cl1 | 0.90 | 2.20 | 3.0937 (11) | 171 |
N2—H2NC···Cl1iii | 0.90 | 2.30 | 3.1724 (12) | 164 |
Symmetry codes: (i) x, y+1, z; (ii) x, y−1, z; (iii) −x+1, −y+1, −z. |
3,4,5-Trimethoxybenzohydrazide is an intermediate toward variety of hetero- cyclic systems. Thioether derivatives bearing 1,3,4-thiadiazole and 3,4,5-tri- methoxyphenyl moieties and N-substituted benzylidene-3,4,5-trimethoxybenzo- hydrazide and 3-acetyl-2-substituted phenyl-5-(3,4,5-trimethoxyphenyl)-2,3 -dihydro-1,3,4-oxadiazole derivatives were proved to have good anti-cancer and anti-tumor bioactivities (Song et al., 2005; Jin et al., 2006). 4-Alkyl(aryl)- thioquinazoline derivatives synthesized from gallic acid were highly effective against cancer cell lines (Yang et al., 2007). The title compound was obtained as an unexpected by-product during synthesis of 1-[2-(substituted aryl)]-3 -methylpyrazol-5-ones, and we report herein its crystal structure.
In the title compound (Fig. 1), the bond lengths (Allen et al., 1987) and angles are within normal ranges, and may be compared with the corresponding ones in 3,4,5-trimethoxybenzohydrazide hemihydrate (Zareef et al., 2006). The (N1/N2/O4/C7) plane is oriented with respect to ring A (C1-C6) at a dihedral angle of 30.52 (3)°, which is larger than the corresponding one [9.27 (10)°] in 3,4,5-trimethoxybenzohydrazide hemihydrate.
In the crystal structure, the molecules are linked through N-H···O and N-H···Cl hydrogen bonds, forming a molecular tape running along the b axis (Fig. 2). No significant interaction is observed between the tapes (Fig. 3).