Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810039395/is2609sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810039395/is2609Isup2.hkl |
CCDC reference: 799668
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.002 Å
- R factor = 0.033
- wR factor = 0.095
- Data-to-parameter ratio = 13.7
checkCIF/PLATON results
No syntax errors found
Alert level C SHFSU01_ALERT_2_C Test not performed. _refine_ls_shift/su_max and _refine_ls_shift/esd_max not present. Absolute value of the parameter shift to su ratio given 0.001 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 2 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 3
Alert level G PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 2
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A few drops of nitric acid were added to a hot methanol solution (20 ml) of 8-hydroxyquinoline (29 mg, Merck) which had been warmed over a magnetic stirrer hotplate for a few minutes. The resulting solution was allowed to cool slowly to room temperature. Crystals of the title compound appeared after a few days.
Atoms H1N1 and H1O1 were located from the difference Fourier map and were refined freely [N—H = 0.874 (18) Å and O—H = 0.86 (2) Å]. The remaining H atoms were positioned geometrically with the bond length of C—H being 0.93 Å and were refined using a riding model, with Uiso(H) = 1.2Ueq(C).
Recently, hydrogen-bonding patterns involving quinoline and its derivatives with organic acid have been investigated (Loh et al., 2010a,b,c,d). Syntheses of the quinoline derivatives were discussed earlier (Sasaki et al., 1998; Reux et al., 2009). Quinolines and their derivatives are very important compounds because of their wide occurrence in natural products (Morimoto et al., 1991; Michael, 1997) and biologically active compounds (Markees et al., 1970; Campbell et al., 1988). Herein we report the synthesis of 8-hydroxyquinolin-1-ium nitrate.
The asymmetric unit of the title compound (Fig. 1) consists of one 8-hydroxyquinolin-1-ium cation (C1–C10/N1/N2) and one nitrate anion (O2–O4/N2). One proton is transferred from the hydroxyl group of nitric acid to the atom N1 of 8-hydroxyquinoline during the crystallization, resulting in the formation of salt. The quinoline ring system (C1–C9/N1) is approximately planar with a maximum deviation of 0.043 (1) Å at atom C4. Bond lengths (Allen et al., 1987) and angles are within the normal ranges and are comparable to the related structures (Loh et al., 2010a,b,c,d).
In the crystal packing (Fig. 2), R22(7) ring motifs are formed by intermolecular N1—H1N1···O4 and C2—H2A···O3 hydrogen bonds (Table 1). In addition, pairs of intermolecular O1—H1O1···O4 and C8—H8A···O2 hydrogen bonds (Table 1) link the cations and anions together to generate another set of R22(8) ring motifs. These sets of ring motifs are further linked into ribbons along the a axis via intermolecular C2—H2A···O3 hydrogen bonds (Table 1).
For background to and the biological activity of quinoline derivatives, see: Campbell et al. (1988); Markees et al. (1970); Michael (1997); Morimoto et al. (1991); Reux et al. (2009); Sasaki et al. (1998). For related structures, see: Loh et al. (2010a,b,c,d). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986). For bond-length data, see: Allen et al. (1987).
Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
C9H8NO+·NO3− | F(000) = 432 |
Mr = 208.17 | Dx = 1.602 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 5491 reflections |
a = 11.3186 (2) Å | θ = 3.5–37.4° |
b = 6.7568 (1) Å | µ = 0.13 mm−1 |
c = 14.5006 (2) Å | T = 100 K |
β = 128.882 (1)° | Block, colourless |
V = 863.27 (2) Å3 | 0.33 × 0.21 × 0.15 mm |
Z = 4 |
Bruker SMART APEXII CCD area-detector diffractometer | 1978 independent reflections |
Radiation source: fine-focus sealed tube | 1754 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
φ and ω scans | θmax = 27.5°, θmin = 3.5° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −14→14 |
Tmin = 0.959, Tmax = 0.981 | k = −8→8 |
9590 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.033 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | w = 1/[σ2(Fo2) + (0.0472P)2 + 0.3584P] where P = (Fo2 + 2Fc2)/3 |
1978 reflections | (Δ/σ)max < 0.001 |
144 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.22 e Å−3 |
C9H8NO+·NO3− | V = 863.27 (2) Å3 |
Mr = 208.17 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.3186 (2) Å | µ = 0.13 mm−1 |
b = 6.7568 (1) Å | T = 100 K |
c = 14.5006 (2) Å | 0.33 × 0.21 × 0.15 mm |
β = 128.882 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 1978 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 1754 reflections with I > 2σ(I) |
Tmin = 0.959, Tmax = 0.981 | Rint = 0.023 |
9590 measured reflections |
R[F2 > 2σ(F2)] = 0.033 | 0 restraints |
wR(F2) = 0.095 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.08 | Δρmax = 0.39 e Å−3 |
1978 reflections | Δρmin = −0.22 e Å−3 |
144 parameters |
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.07908 (9) | 0.09986 (13) | 0.12784 (7) | 0.0167 (2) | |
N1 | −0.13600 (11) | 0.10475 (14) | 0.15595 (8) | 0.0139 (2) | |
C1 | 0.01506 (13) | 0.11333 (16) | 0.25398 (10) | 0.0138 (2) | |
C2 | −0.24612 (13) | 0.10646 (17) | 0.16438 (10) | 0.0163 (2) | |
H2A | −0.3465 | 0.0953 | 0.0961 | 0.020* | |
C3 | −0.21344 (13) | 0.12476 (17) | 0.27446 (10) | 0.0171 (2) | |
H3A | −0.2913 | 0.1279 | 0.2795 | 0.021* | |
C4 | −0.06498 (13) | 0.13802 (17) | 0.37464 (10) | 0.0158 (2) | |
H4A | −0.0424 | 0.1546 | 0.4479 | 0.019* | |
C5 | 0.05450 (13) | 0.12672 (16) | 0.36803 (10) | 0.0144 (2) | |
C6 | 0.21000 (13) | 0.12812 (17) | 0.46913 (10) | 0.0171 (2) | |
H6A | 0.2383 | 0.1339 | 0.5447 | 0.020* | |
C7 | 0.31841 (13) | 0.12080 (18) | 0.45453 (10) | 0.0186 (3) | |
H7A | 0.4204 | 0.1209 | 0.5210 | 0.022* | |
C8 | 0.27878 (13) | 0.11312 (18) | 0.34078 (11) | 0.0177 (2) | |
H8A | 0.3547 | 0.1114 | 0.3334 | 0.021* | |
C9 | 0.12859 (13) | 0.10813 (16) | 0.24054 (10) | 0.0148 (2) | |
O2 | 0.52824 (10) | 0.47945 (18) | 0.24518 (8) | 0.0321 (3) | |
O3 | 0.53907 (10) | 0.42125 (15) | 0.39694 (8) | 0.0239 (2) | |
O4 | 0.74765 (9) | 0.44023 (13) | 0.41965 (7) | 0.0179 (2) | |
N2 | 0.60151 (11) | 0.44742 (16) | 0.35208 (9) | 0.0177 (2) | |
H1N1 | −0.1627 (19) | 0.091 (2) | 0.0852 (16) | 0.028 (4)* | |
H1O1 | 0.145 (2) | 0.056 (3) | 0.1211 (17) | 0.042 (5)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0159 (4) | 0.0230 (4) | 0.0140 (4) | 0.0024 (3) | 0.0108 (3) | 0.0012 (3) |
N1 | 0.0159 (5) | 0.0145 (5) | 0.0124 (4) | 0.0001 (4) | 0.0095 (4) | −0.0002 (3) |
C1 | 0.0161 (5) | 0.0114 (5) | 0.0137 (5) | 0.0003 (4) | 0.0094 (4) | 0.0003 (4) |
C2 | 0.0153 (5) | 0.0169 (5) | 0.0167 (5) | −0.0007 (4) | 0.0100 (4) | −0.0008 (4) |
C3 | 0.0189 (5) | 0.0183 (6) | 0.0200 (5) | −0.0007 (4) | 0.0150 (5) | −0.0012 (4) |
C4 | 0.0216 (6) | 0.0138 (5) | 0.0150 (5) | 0.0000 (4) | 0.0130 (5) | −0.0003 (4) |
C5 | 0.0183 (5) | 0.0114 (5) | 0.0146 (5) | −0.0001 (4) | 0.0108 (5) | 0.0000 (4) |
C6 | 0.0198 (5) | 0.0163 (5) | 0.0133 (5) | 0.0006 (4) | 0.0095 (5) | −0.0004 (4) |
C7 | 0.0152 (5) | 0.0191 (6) | 0.0160 (5) | 0.0010 (4) | 0.0071 (4) | −0.0004 (4) |
C8 | 0.0163 (5) | 0.0186 (6) | 0.0203 (6) | 0.0008 (4) | 0.0126 (5) | 0.0003 (4) |
C9 | 0.0184 (5) | 0.0132 (5) | 0.0147 (5) | 0.0010 (4) | 0.0113 (5) | 0.0010 (4) |
O2 | 0.0186 (4) | 0.0607 (7) | 0.0157 (4) | 0.0030 (4) | 0.0101 (4) | 0.0078 (4) |
O3 | 0.0169 (4) | 0.0395 (5) | 0.0197 (4) | −0.0012 (4) | 0.0137 (4) | 0.0007 (4) |
O4 | 0.0121 (4) | 0.0260 (5) | 0.0155 (4) | 0.0000 (3) | 0.0087 (3) | −0.0005 (3) |
N2 | 0.0141 (4) | 0.0238 (5) | 0.0159 (5) | 0.0002 (4) | 0.0098 (4) | −0.0006 (4) |
O1—C9 | 1.3558 (13) | C4—H4A | 0.9300 |
O1—H1O1 | 0.86 (2) | C5—C6 | 1.4170 (15) |
N1—C2 | 1.3266 (15) | C6—C7 | 1.3707 (16) |
N1—C1 | 1.3770 (14) | C6—H6A | 0.9300 |
N1—H1N1 | 0.874 (18) | C7—C8 | 1.4126 (16) |
C1—C9 | 1.4160 (16) | C7—H7A | 0.9300 |
C1—C5 | 1.4196 (15) | C8—C9 | 1.3790 (16) |
C2—C3 | 1.3995 (16) | C8—H8A | 0.9300 |
C2—H2A | 0.9300 | O2—N2 | 1.2343 (13) |
C3—C4 | 1.3701 (16) | O3—N2 | 1.2372 (13) |
C3—H3A | 0.9300 | O4—N2 | 1.2899 (12) |
C4—C5 | 1.4166 (16) | ||
C9—O1—H1O1 | 114.7 (13) | C4—C5—C1 | 117.82 (10) |
C2—N1—C1 | 122.28 (10) | C6—C5—C1 | 118.93 (10) |
C2—N1—H1N1 | 117.2 (11) | C7—C6—C5 | 119.40 (10) |
C1—N1—H1N1 | 120.5 (11) | C7—C6—H6A | 120.3 |
N1—C1—C9 | 120.19 (10) | C5—C6—H6A | 120.3 |
N1—C1—C5 | 118.95 (10) | C6—C7—C8 | 121.52 (11) |
C9—C1—C5 | 120.86 (10) | C6—C7—H7A | 119.2 |
N1—C2—C3 | 120.99 (10) | C8—C7—H7A | 119.2 |
N1—C2—H2A | 119.5 | C9—C8—C7 | 120.63 (11) |
C3—C2—H2A | 119.5 | C9—C8—H8A | 119.7 |
C4—C3—C2 | 119.03 (10) | C7—C8—H8A | 119.7 |
C4—C3—H3A | 120.5 | O1—C9—C8 | 125.09 (10) |
C2—C3—H3A | 120.5 | O1—C9—C1 | 116.28 (10) |
C3—C4—C5 | 120.81 (10) | C8—C9—C1 | 118.62 (10) |
C3—C4—H4A | 119.6 | O2—N2—O3 | 122.01 (10) |
C5—C4—H4A | 119.6 | O2—N2—O4 | 119.39 (9) |
C4—C5—C6 | 123.24 (10) | O3—N2—O4 | 118.60 (9) |
C2—N1—C1—C9 | 179.06 (10) | C4—C5—C6—C7 | −178.64 (11) |
C2—N1—C1—C5 | −0.72 (16) | C1—C5—C6—C7 | 1.38 (16) |
C1—N1—C2—C3 | 2.44 (17) | C5—C6—C7—C8 | 0.40 (18) |
N1—C2—C3—C4 | −0.98 (17) | C6—C7—C8—C9 | −1.52 (18) |
C2—C3—C4—C5 | −2.14 (17) | C7—C8—C9—O1 | −179.71 (11) |
C3—C4—C5—C6 | −176.26 (11) | C7—C8—C9—C1 | 0.77 (17) |
C3—C4—C5—C1 | 3.72 (16) | N1—C1—C9—O1 | 1.69 (15) |
N1—C1—C5—C4 | −2.31 (15) | C5—C1—C9—O1 | −178.53 (10) |
C9—C1—C5—C4 | 177.91 (10) | N1—C1—C9—C8 | −178.75 (10) |
N1—C1—C5—C6 | 177.67 (10) | C5—C1—C9—C8 | 1.03 (16) |
C9—C1—C5—C6 | −2.11 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···O4i | 0.874 (18) | 1.944 (18) | 2.8112 (12) | 171.6 (15) |
O1—H1O1···O4ii | 0.86 (3) | 1.83 (3) | 2.6794 (16) | 169 (2) |
C2—H2A···O3iii | 0.93 | 2.53 | 3.106 (2) | 120 |
C2—H2A···O3i | 0.93 | 2.31 | 3.0247 (14) | 133 |
C8—H8A···O2ii | 0.93 | 2.40 | 3.249 (2) | 152 |
Symmetry codes: (i) x−1, −y+1/2, z−1/2; (ii) −x+1, y−1/2, −z+1/2; (iii) −x, y−1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C9H8NO+·NO3− |
Mr | 208.17 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 11.3186 (2), 6.7568 (1), 14.5006 (2) |
β (°) | 128.882 (1) |
V (Å3) | 863.27 (2) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.13 |
Crystal size (mm) | 0.33 × 0.21 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.959, 0.981 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9590, 1978, 1754 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.033, 0.095, 1.08 |
No. of reflections | 1978 |
No. of parameters | 144 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.39, −0.22 |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N1···O4i | 0.874 (18) | 1.944 (18) | 2.8112 (12) | 171.6 (15) |
O1—H1O1···O4ii | 0.86 (3) | 1.83 (3) | 2.6794 (16) | 169 (2) |
C2—H2A···O3iii | 0.93 | 2.53 | 3.106 (2) | 120 |
C2—H2A···O3i | 0.93 | 2.31 | 3.0247 (14) | 133.3 |
C8—H8A···O2ii | 0.93 | 2.40 | 3.249 (2) | 152 |
Symmetry codes: (i) x−1, −y+1/2, z−1/2; (ii) −x+1, y−1/2, −z+1/2; (iii) −x, y−1/2, −z+1/2. |
Recently, hydrogen-bonding patterns involving quinoline and its derivatives with organic acid have been investigated (Loh et al., 2010a,b,c,d). Syntheses of the quinoline derivatives were discussed earlier (Sasaki et al., 1998; Reux et al., 2009). Quinolines and their derivatives are very important compounds because of their wide occurrence in natural products (Morimoto et al., 1991; Michael, 1997) and biologically active compounds (Markees et al., 1970; Campbell et al., 1988). Herein we report the synthesis of 8-hydroxyquinolin-1-ium nitrate.
The asymmetric unit of the title compound (Fig. 1) consists of one 8-hydroxyquinolin-1-ium cation (C1–C10/N1/N2) and one nitrate anion (O2–O4/N2). One proton is transferred from the hydroxyl group of nitric acid to the atom N1 of 8-hydroxyquinoline during the crystallization, resulting in the formation of salt. The quinoline ring system (C1–C9/N1) is approximately planar with a maximum deviation of 0.043 (1) Å at atom C4. Bond lengths (Allen et al., 1987) and angles are within the normal ranges and are comparable to the related structures (Loh et al., 2010a,b,c,d).
In the crystal packing (Fig. 2), R22(7) ring motifs are formed by intermolecular N1—H1N1···O4 and C2—H2A···O3 hydrogen bonds (Table 1). In addition, pairs of intermolecular O1—H1O1···O4 and C8—H8A···O2 hydrogen bonds (Table 1) link the cations and anions together to generate another set of R22(8) ring motifs. These sets of ring motifs are further linked into ribbons along the a axis via intermolecular C2—H2A···O3 hydrogen bonds (Table 1).