Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810047215/is2632sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810047215/is2632Isup2.hkl |
CCDC reference: 803229
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.002 Å
- R factor = 0.024
- wR factor = 0.062
- Data-to-parameter ratio = 14.4
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 18 PLAT915_ALERT_3_C Low Friedel Pair Coverage ...................... 73.50 Perc. PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 11
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.49 From the CIF: _reflns_number_total 3646 Count of symmetry unique reflns 2117 Completeness (_total/calc) 172.22% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 1529 Fraction of Friedel pairs measured 0.722 Are heavy atom types Z>Si present yes PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3 PLAT063_ALERT_4_G Crystal Size Likely too Large for Beam Size .... 0.77 mm PLAT154_ALERT_1_G The su's on the Cell Angles are Equal (x 10000) 100 Deg.
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 3 ALERT level C = Check and explain 4 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The compound has been synthesized using the method available in the literature (Ragavan et al., 2009) and recrystallized using the methanol-chloroform (1:1) mixture (yield 76%, m.p. 436.2–437.5 K).
H atoms were positioned geometrically (C—H = 0.93 or 0.97 Å) and refined using a riding model, with Uiso(H) = 1.2Ueq(C).
Antibacterial and antifungal activities of the azoles are most widely studied and some of them are in clinical practice as anti-microbial agents. However, the azole-resistant strain had led to the development of new antimicrobial compounds. In particular, pyrazole derivatives are extensively studied and used as antimicrobial agents. Pyrazole is an important class of heterocyclic compounds and many pyrazole derivatives are reported to have the broad spectrum of biological properties such as anti-inflammatory, antifungal, herbicidal, anti-tumour, cytotoxic, molecular modelling and antiviral activities. Pyrazole derivatives also act as antiangiogenic agents, A3 adenosine receptor antagonists, neuropeptide YY5 receptor antagonists, kinase inhibitor for treatment of type 2 diabetes, hyperlipidemia, obesity and thrombopiotinmimetics. Recently urea derivatives of pyrazoles have been reported as potent inhibitors of p38 kinase. Since the high electronegativity of halogens (particularly chlorine and fluorine) in the aromatic part of the drug molecules play an important role in enhancing their biological activity, we are interested to have 4-fluoro or 4-chloro substitution in the aryls of 1,5-diaryl pyrazoles. As part of our on-going research aiming the synthesis of new antimicrobial compounds, we have reported the synthesis of novel pyrazole derivatives and their microbial activities (Ragavan et al., 2009; 2010). The structure of the title compound is presented here.
The asymmetric unit of the title compound (Fig. 1), consists of four rings, namely chlorophenyl (C7–C12/Cl1), 4-oxopiperidine-1-carbaldehyde (C16–C21/N3/O1/O2), fluorophenyl(C1–C6/F1) and 1H-pyrazole (N1/N2/C13–C15) rings. The 1H-pyrazole ring is essentially planar [maximum deviation of 0.002 (1) Å at atoms C13 and C15] and makes dihedral angles of 36.73 (7), 18.73 (7) and 60.88 (8)°, with the chlorophenyl [maximum deviation of 0.0077 (4) Å at atom Cl1], fluorophenyl [maximum deviation of 0.0084 (14) Å at atom C6] and 4-oxopiperidine-1-carbaldehyde [with the r.m.s. deviation of 0.3007 (15) Å] rings. Bond lengths (Allen et al., 1987) and angles are normal and comparable to the related structure (Shahani et al., 2010). The molecular structure is stabilized by an intramolecular C17—H17B···N2 hydrogen bond which forms an S(6) ring motif.
In the crystal packing (Fig. 2), intermolecular C14—H14A···F1iiand C7—H7A···F1ii hydrogen bonds (Table 1) connect the neighbouring molecules, generating an R21(7) ring motif. Intermolecular C2—H2A···O1i hydrogen bonds (Table 1) further link the molecules into two-dimensional sheets parallel to the ac plane.
For pyrazole derivatives and their microbial activities, see: Ragavan et al. (2009, 2010). For a related structure, see: Shahani et al. (2010). For ring conformations, see: Cremer & Pople (1975). For hydrogen-bond motifs, see: Bernstein et al. (1995). For bond-length data, see: Allen et al. (1987). For the stability of the temperature controller used in the data collection, see: Cosier & Glazer (1986).
Data collection: APEX2 (Bruker, 2009); cell refinement: SAINT (Bruker, 2009); data reduction: SAINT (Bruker, 2009); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
C21H17ClFN3O2 | Z = 1 |
Mr = 397.83 | F(000) = 206 |
Triclinic, P1 | Dx = 1.430 Mg m−3 |
Hall symbol: P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.0341 (2) Å | Cell parameters from 9510 reflections |
b = 8.2500 (3) Å | θ = 2.2–35.0° |
c = 10.2448 (3) Å | µ = 0.24 mm−1 |
α = 108.837 (1)° | T = 100 K |
β = 104.782 (1)° | Needle, colourless |
γ = 92.792 (1)° | 0.77 × 0.21 × 0.11 mm |
V = 461.90 (3) Å3 |
Bruker SMART APEXII CCD area-detector diffractometer | 3646 independent reflections |
Radiation source: fine-focus sealed tube | 3596 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.020 |
φ and ω scans | θmax = 27.5°, θmin = 2.2° |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | h = −7→7 |
Tmin = 0.837, Tmax = 0.974 | k = −10→10 |
10178 measured reflections | l = −13→13 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.024 | H-atom parameters constrained |
wR(F2) = 0.062 | w = 1/[σ2(Fo2) + (0.0375P)2 + 0.0616P] where P = (Fo2 + 2Fc2)/3 |
S = 1.05 | (Δ/σ)max = 0.001 |
3646 reflections | Δρmax = 0.17 e Å−3 |
253 parameters | Δρmin = −0.22 e Å−3 |
3 restraints | Absolute structure: Flack (1983), 1556 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.06 (3) |
C21H17ClFN3O2 | γ = 92.792 (1)° |
Mr = 397.83 | V = 461.90 (3) Å3 |
Triclinic, P1 | Z = 1 |
a = 6.0341 (2) Å | Mo Kα radiation |
b = 8.2500 (3) Å | µ = 0.24 mm−1 |
c = 10.2448 (3) Å | T = 100 K |
α = 108.837 (1)° | 0.77 × 0.21 × 0.11 mm |
β = 104.782 (1)° |
Bruker SMART APEXII CCD area-detector diffractometer | 3646 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2009) | 3596 reflections with I > 2σ(I) |
Tmin = 0.837, Tmax = 0.974 | Rint = 0.020 |
10178 measured reflections |
R[F2 > 2σ(F2)] = 0.024 | H-atom parameters constrained |
wR(F2) = 0.062 | Δρmax = 0.17 e Å−3 |
S = 1.05 | Δρmin = −0.22 e Å−3 |
3646 reflections | Absolute structure: Flack (1983), 1556 Friedel pairs |
253 parameters | Absolute structure parameter: 0.06 (3) |
3 restraints |
Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cl1 | −0.18751 (5) | −0.56629 (4) | −0.09987 (4) | 0.02699 (9) | |
F1 | 0.47475 (18) | −0.01865 (15) | −0.50052 (9) | 0.0397 (3) | |
O1 | 1.11635 (17) | 0.26727 (13) | 0.53957 (10) | 0.0225 (2) | |
O2 | 1.85032 (19) | 0.66828 (16) | 0.41014 (12) | 0.0326 (3) | |
N1 | 0.73866 (19) | 0.06297 (14) | 0.07455 (11) | 0.0160 (2) | |
N2 | 0.92725 (19) | 0.18040 (14) | 0.16028 (11) | 0.0171 (2) | |
N3 | 1.27132 (19) | 0.41856 (15) | 0.42751 (11) | 0.0197 (2) | |
C1 | 0.4556 (2) | 0.08181 (18) | −0.13442 (14) | 0.0192 (3) | |
H1A | 0.3585 | 0.1228 | −0.0774 | 0.023* | |
C2 | 0.3886 (3) | 0.06260 (19) | −0.27928 (14) | 0.0235 (3) | |
H2A | 0.2462 | 0.0894 | −0.3215 | 0.028* | |
C3 | 0.5399 (3) | 0.00258 (19) | −0.35841 (14) | 0.0254 (3) | |
C4 | 0.7542 (3) | −0.03780 (19) | −0.30190 (14) | 0.0243 (3) | |
H4A | 0.8525 | −0.0754 | −0.3587 | 0.029* | |
C5 | 0.8185 (2) | −0.02049 (18) | −0.15695 (14) | 0.0200 (3) | |
H5A | 0.9602 | −0.0487 | −0.1154 | 0.024* | |
C6 | 0.6687 (2) | 0.03934 (16) | −0.07542 (13) | 0.0161 (2) | |
C7 | 0.2588 (2) | −0.14175 (17) | 0.15655 (13) | 0.0173 (3) | |
H7A | 0.2749 | −0.0537 | 0.2437 | 0.021* | |
C8 | 0.0689 (2) | −0.27130 (18) | 0.10073 (14) | 0.0190 (3) | |
H8A | −0.0413 | −0.2705 | 0.1498 | 0.023* | |
C9 | 0.0469 (2) | −0.40181 (17) | −0.02954 (15) | 0.0192 (3) | |
C10 | 0.2091 (3) | −0.40594 (18) | −0.10451 (15) | 0.0199 (3) | |
H10A | 0.1914 | −0.4943 | −0.1918 | 0.024* | |
C11 | 0.3994 (2) | −0.27583 (17) | −0.04738 (14) | 0.0188 (3) | |
H11A | 0.5098 | −0.2778 | −0.0966 | 0.023* | |
C12 | 0.4254 (2) | −0.14175 (16) | 0.08395 (13) | 0.0160 (3) | |
C13 | 0.6292 (2) | −0.00678 (16) | 0.15007 (13) | 0.0151 (2) | |
C14 | 0.7564 (2) | 0.07058 (17) | 0.29276 (13) | 0.0172 (3) | |
H14A | 0.7284 | 0.0510 | 0.3719 | 0.021* | |
C15 | 0.9368 (2) | 0.18496 (17) | 0.29308 (13) | 0.0164 (3) | |
C16 | 1.1168 (2) | 0.29506 (17) | 0.42851 (13) | 0.0168 (3) | |
C17 | 1.2640 (2) | 0.49206 (18) | 0.31390 (14) | 0.0202 (3) | |
H17A | 1.2384 | 0.6119 | 0.3472 | 0.024* | |
H17B | 1.1365 | 0.4287 | 0.2296 | 0.024* | |
C18 | 1.4914 (3) | 0.48167 (19) | 0.27422 (15) | 0.0225 (3) | |
H18A | 1.5073 | 0.3614 | 0.2298 | 0.027* | |
H18B | 1.4901 | 0.5391 | 0.2051 | 0.027* | |
C19 | 1.6952 (3) | 0.56654 (19) | 0.40686 (15) | 0.0240 (3) | |
C20 | 1.6883 (2) | 0.5158 (2) | 0.53511 (15) | 0.0239 (3) | |
H20A | 1.8015 | 0.5955 | 0.6202 | 0.029* | |
H20B | 1.7320 | 0.4010 | 0.5200 | 0.029* | |
C21 | 1.4500 (2) | 0.51622 (19) | 0.56187 (14) | 0.0203 (3) | |
H21A | 1.4476 | 0.4642 | 0.6341 | 0.024* | |
H21B | 1.4190 | 0.6344 | 0.5975 | 0.024* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1 | 0.02313 (16) | 0.01987 (16) | 0.03408 (18) | −0.00462 (12) | 0.00415 (13) | 0.00849 (13) |
F1 | 0.0393 (5) | 0.0625 (7) | 0.0143 (4) | −0.0089 (5) | 0.0024 (4) | 0.0159 (4) |
O1 | 0.0247 (5) | 0.0267 (5) | 0.0153 (4) | 0.0003 (4) | 0.0023 (4) | 0.0092 (4) |
O2 | 0.0231 (5) | 0.0389 (6) | 0.0328 (6) | −0.0016 (5) | 0.0122 (4) | 0.0060 (5) |
N1 | 0.0171 (5) | 0.0171 (5) | 0.0133 (5) | −0.0006 (4) | 0.0035 (4) | 0.0058 (4) |
N2 | 0.0162 (5) | 0.0173 (5) | 0.0150 (5) | −0.0008 (4) | 0.0013 (4) | 0.0048 (4) |
N3 | 0.0203 (6) | 0.0210 (6) | 0.0139 (5) | −0.0026 (5) | −0.0014 (4) | 0.0065 (4) |
C1 | 0.0194 (6) | 0.0214 (7) | 0.0187 (6) | −0.0005 (5) | 0.0056 (5) | 0.0097 (5) |
C2 | 0.0222 (7) | 0.0291 (8) | 0.0196 (7) | −0.0038 (6) | 0.0001 (5) | 0.0145 (6) |
C3 | 0.0308 (7) | 0.0295 (8) | 0.0129 (6) | −0.0090 (6) | 0.0024 (5) | 0.0085 (5) |
C4 | 0.0281 (7) | 0.0243 (7) | 0.0183 (6) | −0.0055 (6) | 0.0098 (6) | 0.0033 (5) |
C5 | 0.0199 (6) | 0.0182 (6) | 0.0196 (6) | −0.0016 (5) | 0.0057 (5) | 0.0041 (5) |
C6 | 0.0197 (6) | 0.0160 (6) | 0.0127 (5) | −0.0023 (5) | 0.0040 (5) | 0.0062 (4) |
C7 | 0.0203 (6) | 0.0173 (6) | 0.0151 (6) | 0.0034 (5) | 0.0039 (5) | 0.0075 (5) |
C8 | 0.0187 (6) | 0.0213 (7) | 0.0206 (6) | 0.0038 (5) | 0.0061 (5) | 0.0114 (5) |
C9 | 0.0175 (6) | 0.0159 (6) | 0.0244 (7) | −0.0009 (5) | 0.0019 (5) | 0.0109 (5) |
C10 | 0.0240 (7) | 0.0165 (6) | 0.0182 (6) | 0.0011 (5) | 0.0051 (5) | 0.0055 (5) |
C11 | 0.0211 (6) | 0.0174 (6) | 0.0184 (6) | 0.0012 (5) | 0.0062 (5) | 0.0068 (5) |
C12 | 0.0179 (6) | 0.0149 (6) | 0.0155 (5) | 0.0021 (5) | 0.0017 (5) | 0.0081 (5) |
C13 | 0.0174 (6) | 0.0142 (6) | 0.0154 (5) | 0.0035 (5) | 0.0055 (5) | 0.0065 (5) |
C14 | 0.0206 (6) | 0.0178 (6) | 0.0138 (6) | 0.0028 (5) | 0.0045 (5) | 0.0065 (5) |
C15 | 0.0182 (6) | 0.0161 (6) | 0.0147 (6) | 0.0035 (5) | 0.0031 (5) | 0.0060 (5) |
C16 | 0.0172 (6) | 0.0172 (6) | 0.0151 (6) | 0.0044 (5) | 0.0027 (5) | 0.0055 (5) |
C17 | 0.0202 (6) | 0.0202 (6) | 0.0195 (6) | −0.0005 (5) | 0.0022 (5) | 0.0090 (5) |
C18 | 0.0258 (7) | 0.0229 (7) | 0.0192 (6) | 0.0035 (6) | 0.0074 (5) | 0.0070 (5) |
C19 | 0.0196 (7) | 0.0237 (7) | 0.0260 (7) | 0.0062 (6) | 0.0086 (5) | 0.0033 (6) |
C20 | 0.0190 (7) | 0.0258 (7) | 0.0218 (7) | 0.0029 (6) | 0.0021 (5) | 0.0047 (5) |
C21 | 0.0192 (6) | 0.0224 (7) | 0.0144 (6) | −0.0004 (5) | 0.0011 (5) | 0.0032 (5) |
Cl1—C9 | 1.7387 (14) | C8—C9 | 1.3877 (19) |
F1—C3 | 1.3570 (14) | C8—H8A | 0.9300 |
O1—C16 | 1.2317 (16) | C9—C10 | 1.385 (2) |
O2—C19 | 1.2130 (19) | C10—C11 | 1.394 (2) |
N1—N2 | 1.3558 (15) | C10—H10A | 0.9300 |
N1—C13 | 1.3701 (17) | C11—C12 | 1.4045 (18) |
N1—C6 | 1.4299 (15) | C11—H11A | 0.9300 |
N2—C15 | 1.3352 (16) | C12—C13 | 1.4714 (18) |
N3—C16 | 1.3515 (18) | C13—C14 | 1.3823 (17) |
N3—C21 | 1.4657 (15) | C14—C15 | 1.4039 (19) |
N3—C17 | 1.4684 (17) | C14—H14A | 0.9300 |
C1—C6 | 1.3875 (19) | C15—C16 | 1.5004 (17) |
C1—C2 | 1.3881 (18) | C17—C18 | 1.526 (2) |
C1—H1A | 0.9300 | C17—H17A | 0.9700 |
C2—C3 | 1.378 (2) | C17—H17B | 0.9700 |
C2—H2A | 0.9300 | C18—C19 | 1.516 (2) |
C3—C4 | 1.379 (2) | C18—H18A | 0.9700 |
C4—C5 | 1.3927 (18) | C18—H18B | 0.9700 |
C4—H4A | 0.9300 | C19—C20 | 1.511 (2) |
C5—C6 | 1.3862 (18) | C20—C21 | 1.531 (2) |
C5—H5A | 0.9300 | C20—H20A | 0.9700 |
C7—C8 | 1.3903 (19) | C20—H20B | 0.9700 |
C7—C12 | 1.3951 (19) | C21—H21A | 0.9700 |
C7—H7A | 0.9300 | C21—H21B | 0.9700 |
N2—N1—C13 | 112.88 (10) | C7—C12—C13 | 119.32 (11) |
N2—N1—C6 | 118.05 (11) | C11—C12—C13 | 121.72 (12) |
C13—N1—C6 | 128.81 (11) | N1—C13—C14 | 105.49 (12) |
C15—N2—N1 | 104.32 (11) | N1—C13—C12 | 124.42 (11) |
C16—N3—C21 | 118.56 (11) | C14—C13—C12 | 130.04 (12) |
C16—N3—C17 | 128.10 (11) | C13—C14—C15 | 105.57 (12) |
C21—N3—C17 | 112.47 (11) | C13—C14—H14A | 127.2 |
C6—C1—C2 | 119.43 (13) | C15—C14—H14A | 127.2 |
C6—C1—H1A | 120.3 | N2—C15—C14 | 111.75 (11) |
C2—C1—H1A | 120.3 | N2—C15—C16 | 125.60 (12) |
C3—C2—C1 | 117.83 (13) | C14—C15—C16 | 122.64 (11) |
C3—C2—H2A | 121.1 | O1—C16—N3 | 122.03 (11) |
C1—C2—H2A | 121.1 | O1—C16—C15 | 116.83 (12) |
F1—C3—C2 | 118.27 (13) | N3—C16—C15 | 121.13 (11) |
F1—C3—C4 | 117.82 (13) | N3—C17—C18 | 110.09 (11) |
C2—C3—C4 | 123.90 (12) | N3—C17—H17A | 109.6 |
C3—C4—C5 | 117.84 (13) | C18—C17—H17A | 109.6 |
C3—C4—H4A | 121.1 | N3—C17—H17B | 109.6 |
C5—C4—H4A | 121.1 | C18—C17—H17B | 109.6 |
C6—C5—C4 | 119.19 (12) | H17A—C17—H17B | 108.2 |
C6—C5—H5A | 120.4 | C19—C18—C17 | 110.61 (11) |
C4—C5—H5A | 120.4 | C19—C18—H18A | 109.5 |
C5—C6—C1 | 121.79 (12) | C17—C18—H18A | 109.5 |
C5—C6—N1 | 119.07 (11) | C19—C18—H18B | 109.5 |
C1—C6—N1 | 119.11 (12) | C17—C18—H18B | 109.5 |
C8—C7—C12 | 121.09 (12) | H18A—C18—H18B | 108.1 |
C8—C7—H7A | 119.5 | O2—C19—C20 | 122.68 (13) |
C12—C7—H7A | 119.5 | O2—C19—C18 | 122.62 (14) |
C9—C8—C7 | 118.83 (13) | C20—C19—C18 | 114.69 (13) |
C9—C8—H8A | 120.6 | C19—C20—C21 | 113.13 (11) |
C7—C8—H8A | 120.6 | C19—C20—H20A | 109.0 |
C10—C9—C8 | 121.64 (13) | C21—C20—H20A | 109.0 |
C10—C9—Cl1 | 118.91 (10) | C19—C20—H20B | 109.0 |
C8—C9—Cl1 | 119.45 (11) | C21—C20—H20B | 109.0 |
C9—C10—C11 | 119.11 (12) | H20A—C20—H20B | 107.8 |
C9—C10—H10A | 120.4 | N3—C21—C20 | 109.72 (11) |
C11—C10—H10A | 120.4 | N3—C21—H21A | 109.7 |
C10—C11—C12 | 120.45 (13) | C20—C21—H21A | 109.7 |
C10—C11—H11A | 119.8 | N3—C21—H21B | 109.7 |
C12—C11—H11A | 119.8 | C20—C21—H21B | 109.7 |
C7—C12—C11 | 118.89 (13) | H21A—C21—H21B | 108.2 |
C13—N1—N2—C15 | −0.07 (13) | C6—N1—C13—C12 | 8.4 (2) |
C6—N1—N2—C15 | 174.57 (11) | C7—C12—C13—N1 | −146.36 (12) |
C6—C1—C2—C3 | −0.5 (2) | C11—C12—C13—N1 | 36.75 (19) |
C1—C2—C3—F1 | 179.21 (13) | C7—C12—C13—C14 | 36.9 (2) |
C1—C2—C3—C4 | −0.6 (2) | C11—C12—C13—C14 | −140.04 (14) |
F1—C3—C4—C5 | −178.30 (12) | N1—C13—C14—C15 | 0.40 (14) |
C2—C3—C4—C5 | 1.5 (2) | C12—C13—C14—C15 | 177.65 (12) |
C3—C4—C5—C6 | −1.3 (2) | N1—N2—C15—C14 | 0.34 (14) |
C4—C5—C6—C1 | 0.3 (2) | N1—N2—C15—C16 | 179.57 (11) |
C4—C5—C6—N1 | −177.75 (12) | C13—C14—C15—N2 | −0.47 (15) |
C2—C1—C6—C5 | 0.6 (2) | C13—C14—C15—C16 | −179.73 (11) |
C2—C1—C6—N1 | 178.67 (12) | C21—N3—C16—O1 | 2.92 (18) |
N2—N1—C6—C5 | 62.36 (15) | C17—N3—C16—O1 | −165.56 (13) |
C13—N1—C6—C5 | −123.97 (15) | C21—N3—C16—C15 | −177.10 (11) |
N2—N1—C6—C1 | −115.72 (14) | C17—N3—C16—C15 | 14.4 (2) |
C13—N1—C6—C1 | 57.94 (19) | N2—C15—C16—O1 | −171.13 (13) |
C12—C7—C8—C9 | −0.09 (18) | C14—C15—C16—O1 | 8.02 (18) |
C7—C8—C9—C10 | 0.12 (19) | N2—C15—C16—N3 | 8.88 (19) |
C7—C8—C9—Cl1 | 179.22 (10) | C14—C15—C16—N3 | −171.97 (12) |
C8—C9—C10—C11 | 0.13 (19) | C16—N3—C17—C18 | −127.53 (14) |
Cl1—C9—C10—C11 | −178.98 (10) | C21—N3—C17—C18 | 63.42 (14) |
C9—C10—C11—C12 | −0.41 (19) | N3—C17—C18—C19 | −54.44 (15) |
C8—C7—C12—C11 | −0.19 (18) | C17—C18—C19—O2 | −132.83 (14) |
C8—C7—C12—C13 | −177.17 (11) | C17—C18—C19—C20 | 46.56 (16) |
C10—C11—C12—C7 | 0.44 (19) | O2—C19—C20—C21 | 134.59 (15) |
C10—C11—C12—C13 | 177.34 (12) | C18—C19—C20—C21 | −44.80 (16) |
N2—N1—C13—C14 | −0.21 (14) | C16—N3—C21—C20 | 129.76 (13) |
C6—N1—C13—C14 | −174.15 (12) | C17—N3—C21—C20 | −60.04 (15) |
N2—N1—C13—C12 | −177.66 (11) | C19—C20—C21—N3 | 49.66 (16) |
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2A···O1i | 0.93 | 2.38 | 3.1196 (19) | 136 |
C7—H7A···F1ii | 0.93 | 2.50 | 3.2099 (15) | 133 |
C14—H14A···F1ii | 0.93 | 2.41 | 3.2614 (17) | 153 |
C17—H17B···N2 | 0.97 | 2.16 | 2.9091 (18) | 133 |
Symmetry codes: (i) x−1, y, z−1; (ii) x, y, z+1. |
Experimental details
Crystal data | |
Chemical formula | C21H17ClFN3O2 |
Mr | 397.83 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 6.0341 (2), 8.2500 (3), 10.2448 (3) |
α, β, γ (°) | 108.837 (1), 104.782 (1), 92.792 (1) |
V (Å3) | 461.90 (3) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.24 |
Crystal size (mm) | 0.77 × 0.21 × 0.11 |
Data collection | |
Diffractometer | Bruker SMART APEXII CCD area-detector |
Absorption correction | Multi-scan (SADABS; Bruker, 2009) |
Tmin, Tmax | 0.837, 0.974 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10178, 3646, 3596 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.024, 0.062, 1.05 |
No. of reflections | 3646 |
No. of parameters | 253 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.17, −0.22 |
Absolute structure | Flack (1983), 1556 Friedel pairs |
Absolute structure parameter | 0.06 (3) |
Computer programs: APEX2 (Bruker, 2009), SAINT (Bruker, 2009), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
C2—H2A···O1i | 0.93 | 2.38 | 3.1196 (19) | 136 |
C7—H7A···F1ii | 0.93 | 2.50 | 3.2099 (15) | 133 |
C14—H14A···F1ii | 0.93 | 2.41 | 3.2614 (17) | 153 |
C17—H17B···N2 | 0.97 | 2.16 | 2.9091 (18) | 133 |
Symmetry codes: (i) x−1, y, z−1; (ii) x, y, z+1. |
Antibacterial and antifungal activities of the azoles are most widely studied and some of them are in clinical practice as anti-microbial agents. However, the azole-resistant strain had led to the development of new antimicrobial compounds. In particular, pyrazole derivatives are extensively studied and used as antimicrobial agents. Pyrazole is an important class of heterocyclic compounds and many pyrazole derivatives are reported to have the broad spectrum of biological properties such as anti-inflammatory, antifungal, herbicidal, anti-tumour, cytotoxic, molecular modelling and antiviral activities. Pyrazole derivatives also act as antiangiogenic agents, A3 adenosine receptor antagonists, neuropeptide YY5 receptor antagonists, kinase inhibitor for treatment of type 2 diabetes, hyperlipidemia, obesity and thrombopiotinmimetics. Recently urea derivatives of pyrazoles have been reported as potent inhibitors of p38 kinase. Since the high electronegativity of halogens (particularly chlorine and fluorine) in the aromatic part of the drug molecules play an important role in enhancing their biological activity, we are interested to have 4-fluoro or 4-chloro substitution in the aryls of 1,5-diaryl pyrazoles. As part of our on-going research aiming the synthesis of new antimicrobial compounds, we have reported the synthesis of novel pyrazole derivatives and their microbial activities (Ragavan et al., 2009; 2010). The structure of the title compound is presented here.
The asymmetric unit of the title compound (Fig. 1), consists of four rings, namely chlorophenyl (C7–C12/Cl1), 4-oxopiperidine-1-carbaldehyde (C16–C21/N3/O1/O2), fluorophenyl(C1–C6/F1) and 1H-pyrazole (N1/N2/C13–C15) rings. The 1H-pyrazole ring is essentially planar [maximum deviation of 0.002 (1) Å at atoms C13 and C15] and makes dihedral angles of 36.73 (7), 18.73 (7) and 60.88 (8)°, with the chlorophenyl [maximum deviation of 0.0077 (4) Å at atom Cl1], fluorophenyl [maximum deviation of 0.0084 (14) Å at atom C6] and 4-oxopiperidine-1-carbaldehyde [with the r.m.s. deviation of 0.3007 (15) Å] rings. Bond lengths (Allen et al., 1987) and angles are normal and comparable to the related structure (Shahani et al., 2010). The molecular structure is stabilized by an intramolecular C17—H17B···N2 hydrogen bond which forms an S(6) ring motif.
In the crystal packing (Fig. 2), intermolecular C14—H14A···F1iiand C7—H7A···F1ii hydrogen bonds (Table 1) connect the neighbouring molecules, generating an R21(7) ring motif. Intermolecular C2—H2A···O1i hydrogen bonds (Table 1) further link the molecules into two-dimensional sheets parallel to the ac plane.