In the title compound, [Cu(C
5H
3N
2O
2)
2(H
2O)
2], the Cu
II ion, located on an inversion center, exhibits an octahedral coordination geometry. The equatorial plane is defined by two
trans-related
N,
O-bidentate pyridazine-3-carboxylate ligands and the axial positions are occupied by two water molecules. In the crystal, molecules are connected by O—H

O hydrogen bonds between the water molecules and the noncoordinating carboxylate O atoms, forming layers parallel to the
bc plane. The layers are stacked along the
a axis by further O—H

O hydrogen bonds between the water molecules and the coordinating carboxylate O atoms. Weak C—H

O hydrogen bonds are also observed between the pyridazine rings and the water molecules and between the pyridazine rings and the non-coordinating carboxylate O atoms.
Supporting information
CCDC reference: 988680
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.027
- wR factor = 0.065
- Data-to-parameter ratio = 11.6
checkCIF/PLATON results
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Alert level G
PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 3 Note
PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF Please Do !
PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 2 Note
PLAT794_ALERT_5_G Tentative Bond Valency for Cu1 (II) ..... 2.23 Note
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 3 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
0 ALERT level C = Check. Ensure it is not caused by an omission or oversight
5 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
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To a solution of CuCl2.2H2O (34 mg, 0.2 mmol) in water (10 mL) 3-pyridazine
carboxylic acid (48 mg, 0.4 mmol) was dropwise added and the resulting
solution was stirred for 1 h at 80 °C. Blue prismatic crystals suitable for
single-crystal X-ray diffraction were obtained by slow evaporation of the
resulting solution after six days.
H atoms of the water molecules were located in a Fourier difference map and
refined isotropically with O—H bond lengths restrained to 0.88 (1) Å. All H
atoms of the pyridazine ring were positioned geometrically and refined using a
riding model with standard SHELXL parameters.
Data collection: CrysAlis PRO (Agilent, 2012); cell refinement: CrysAlis PRO (Agilent, 2012); data reduction: CrysAlis RED (Agilent, 2012); program(s) used to solve structure: OLEX2 (Dolomanov et al., 2009); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012) and DIAMOND (Brandenburg, 2010); software used to prepare material for publication: WinGX (Farrugia, 2012).
trans-Diaquabis(pyridazine-3-carboxylato-
κ2N2,
O)copper(II)
top
Crystal data top
[Cu(C5H3N2O2)2(H2O)2] | F(000) = 350 |
Mr = 345.76 | Dx = 1.951 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 1663 reflections |
a = 5.4014 (1) Å | θ = 2.8–28.4° |
b = 11.5633 (3) Å | µ = 1.89 mm−1 |
c = 9.6283 (2) Å | T = 100 K |
β = 101.837 (3)° | Prism, blue |
V = 588.58 (2) Å3 | 0.19 × 0.09 × 0.06 mm |
Z = 2 | |
Data collection top
Agilent SuperNova diffractometer | 1216 independent reflections |
Radiation source: Nova (Mo) X-ray micro-source | 1077 reflections with I > 2σ(I) |
Multilayer optics monochromator | Rint = 0.022 |
Detector resolution: 16.2439 pixels mm-1 | θmax = 26.5°, θmin = 2.8° |
ω scans | h = −6→6 |
Absorption correction: numerical (CrysAlis PRO; Agilent, 2012) | k = −13→14 |
Tmin = 0.772, Tmax = 0.898 | l = −12→9 |
2532 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.027 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0235P)2 + 0.6643P] where P = (Fo2 + 2Fc2)/3 |
1216 reflections | (Δ/σ)max < 0.001 |
105 parameters | Δρmax = 0.44 e Å−3 |
3 restraints | Δρmin = −0.45 e Å−3 |
Crystal data top
[Cu(C5H3N2O2)2(H2O)2] | V = 588.58 (2) Å3 |
Mr = 345.76 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 5.4014 (1) Å | µ = 1.89 mm−1 |
b = 11.5633 (3) Å | T = 100 K |
c = 9.6283 (2) Å | 0.19 × 0.09 × 0.06 mm |
β = 101.837 (3)° | |
Data collection top
Agilent SuperNova diffractometer | 1216 independent reflections |
Absorption correction: numerical (CrysAlis PRO; Agilent, 2012) | 1077 reflections with I > 2σ(I) |
Tmin = 0.772, Tmax = 0.898 | Rint = 0.022 |
2532 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.027 | 3 restraints |
wR(F2) = 0.065 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.44 e Å−3 |
1216 reflections | Δρmin = −0.45 e Å−3 |
105 parameters | |
Special details top
Experimental. IR (cm-1): 3554(s), 3315(s),
3233(s), 1628(s), 1571(m), 1578(s), 1365(w),
1231(w), 1152(w), 1091(w), 1072(w), 1039(w),
978(m), 851(m), 785(m), 722(m), 669(w),
536(w), 440(w). |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are
estimated using the full covariance matrix. The cell s.u.'s are taken into
account individually in the estimation of s.u.'s in distances, angles and
torsion angles; correlations between s.u.'s in cell parameters are only used
when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
2σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
C3 | 0.4961 (4) | 0.27046 (19) | 0.4096 (2) | 0.0083 (4) | |
C4 | 0.4421 (4) | 0.15278 (19) | 0.3920 (2) | 0.0107 (4) | |
H4 | 0.5153 | 0.1071 | 0.3318 | 0.013* | |
C5 | 0.2754 (4) | 0.10781 (19) | 0.4680 (2) | 0.0106 (5) | |
H5 | 0.2313 | 0.03 | 0.4606 | 0.013* | |
C6 | 0.1737 (4) | 0.18136 (19) | 0.5564 (2) | 0.0111 (5) | |
H6 | 0.0632 | 0.1503 | 0.6089 | 0.013* | |
C7 | 0.6781 (4) | 0.33471 (19) | 0.3358 (2) | 0.0097 (4) | |
Cu1 | 0.5 | 0.5 | 0.5 | 0.00820 (13) | |
N1 | 0.2267 (3) | 0.29375 (16) | 0.5696 (2) | 0.0101 (4) | |
N2 | 0.3890 (3) | 0.33637 (16) | 0.49462 (18) | 0.0084 (4) | |
O1 | 0.7022 (3) | 0.44303 (13) | 0.36438 (16) | 0.0100 (3) | |
O2 | 0.7873 (3) | 0.28108 (13) | 0.25561 (17) | 0.0135 (4) | |
O1W | 0.1555 (3) | 0.53934 (14) | 0.30161 (17) | 0.0121 (3) | |
H1WA | 0.014 (3) | 0.514 (2) | 0.321 (3) | 0.024 (8)* | |
H1WB | 0.149 (6) | 0.6143 (9) | 0.292 (4) | 0.051 (11)* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
C3 | 0.0088 (10) | 0.0095 (11) | 0.0063 (10) | 0.0001 (8) | 0.0005 (8) | 0.0003 (8) |
C4 | 0.0128 (11) | 0.0094 (11) | 0.0094 (10) | 0.0035 (9) | 0.0014 (9) | −0.0004 (8) |
C5 | 0.0107 (10) | 0.0082 (11) | 0.0117 (11) | −0.0007 (8) | −0.0007 (9) | 0.0019 (8) |
C6 | 0.0106 (10) | 0.0125 (11) | 0.0106 (11) | −0.0011 (9) | 0.0028 (9) | 0.0014 (9) |
C7 | 0.0091 (10) | 0.0120 (11) | 0.0080 (10) | −0.0007 (8) | 0.0018 (9) | 0.0001 (9) |
Cu1 | 0.0111 (2) | 0.0052 (2) | 0.0101 (2) | −0.00061 (14) | 0.00618 (15) | −0.00061 (14) |
N1 | 0.0107 (9) | 0.0099 (9) | 0.0104 (9) | −0.0019 (7) | 0.0039 (8) | −0.0002 (7) |
N2 | 0.0091 (9) | 0.0092 (9) | 0.0072 (9) | 0.0007 (7) | 0.0021 (7) | 0.0013 (7) |
O1 | 0.0112 (7) | 0.0071 (8) | 0.0128 (8) | −0.0012 (6) | 0.0052 (6) | 0.0004 (6) |
O2 | 0.0158 (8) | 0.0120 (8) | 0.0152 (8) | −0.0009 (6) | 0.0094 (7) | −0.0033 (6) |
O1W | 0.0101 (8) | 0.0105 (8) | 0.0161 (8) | 0.0006 (6) | 0.0037 (7) | 0.0023 (7) |
Geometric parameters (Å, º) top
C3—N2 | 1.334 (3) | C7—C3 | 1.520 (3) |
C3—C4 | 1.395 (3) | Cu1—O1i | 1.9792 (15) |
C3—C7 | 1.520 (3) | Cu1—O1 | 1.9792 (15) |
C4—C5 | 1.374 (3) | Cu1—N2 | 1.9822 (18) |
C4—H4 | 0.93 | Cu1—N2i | 1.9822 (18) |
C5—C6 | 1.393 (3) | Cu1—O1W | 2.4207 (16) |
C5—H5 | 0.93 | Cu1—O1Wi | 2.4207 (16) |
C6—N1 | 1.331 (3) | N1—N2 | 1.339 (3) |
C6—H6 | 0.93 | O1W—H1WA | 0.872 (10) |
C7—O2 | 1.231 (3) | O1W—H1WB | 0.872 (10) |
C7—O1 | 1.283 (3) | | |
| | | |
N2—C3—C4 | 121.7 (2) | O1i—Cu1—N2i | 82.52 (7) |
N2—C3—C7 | 114.28 (19) | N2—Cu1—N2i | 180 |
C4—C3—C7 | 124.0 (2) | O1—Cu1—O1W | 88.90 (6) |
C5—C4—C3 | 116.6 (2) | O1i—Cu1—O1W | 91.10 (6) |
C5—C4—H4 | 121.7 | N2—Cu1—O1W | 88.82 (6) |
C3—C4—H4 | 121.7 | N2i—Cu1—O1W | 91.18 (6) |
C4—C5—C6 | 118.6 (2) | O1—Cu1—O1Wi | 91.10 (6) |
C4—C5—H5 | 120.7 | O1i—Cu1—O1Wi | 88.90 (6) |
C6—C5—H5 | 120.7 | N2—Cu1—O1Wi | 91.18 (6) |
N1—C6—C5 | 123.4 (2) | N2i—Cu1—O1Wi | 88.82 (6) |
N1—C6—H6 | 118.3 | O1W—Cu1—O1Wi | 180 |
C5—C6—H6 | 118.3 | C6—N1—N2 | 117.37 (19) |
O2—C7—O1 | 125.8 (2) | C3—N2—N1 | 122.33 (19) |
O2—C7—C3 | 119.1 (2) | C3—N2—Cu1 | 113.24 (15) |
O1—C7—C3 | 115.06 (19) | N1—N2—Cu1 | 124.43 (14) |
O1i—Cu1—O1 | 180 | C7—O1—Cu1 | 114.89 (13) |
O1—Cu1—N2 | 82.52 (7) | Cu1—O1W—H1WA | 109.8 (19) |
O1i—Cu1—N2 | 97.48 (7) | Cu1—O1W—H1WB | 106 (2) |
O1—Cu1—N2i | 97.48 (7) | H1WA—O1W—H1WB | 109 (2) |
| | | |
N2—C3—C4—C5 | −0.8 (3) | O1W—Cu1—N2—C3 | 89.46 (15) |
C7—C3—C4—C5 | 179.22 (19) | O1Wi—Cu1—N2—C3 | −90.54 (15) |
C3—C4—C5—C6 | −0.2 (3) | O1—Cu1—N2—N1 | 179.32 (17) |
C4—C5—C6—N1 | 1.1 (3) | O1i—Cu1—N2—N1 | −0.68 (17) |
C5—C6—N1—N2 | −0.9 (3) | O1W—Cu1—N2—N1 | −91.63 (16) |
C4—C3—N2—N1 | 1.0 (3) | O1Wi—Cu1—N2—N1 | 88.37 (16) |
C7—C3—N2—N1 | −179.04 (18) | O2—C7—O1—Cu1 | −179.34 (18) |
C4—C3—N2—Cu1 | 179.92 (16) | C3—C7—O1—Cu1 | 0.8 (2) |
C7—C3—N2—Cu1 | −0.1 (2) | N2—Cu1—O1i—C7i | −179.30 (15) |
C6—N1—N2—C3 | −0.1 (3) | N2—Cu1—O1—C7 | −0.70 (15) |
C6—N1—N2—Cu1 | −178.91 (15) | O1W—Cu1—O1—C7 | −89.65 (15) |
O1—Cu1—N2—C3 | 0.41 (14) | O1Wi—Cu1—O1—C7 | 90.35 (15) |
O1i—Cu1—N2—C3 | −179.59 (14) | | |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O1ii | 0.87 (2) | 1.99 (2) | 2.865 (2) | 175 (2) |
O1W—H1WB···O2iii | 0.87 (1) | 2.03 (2) | 2.878 (2) | 165 (3) |
C4—H4···O1Wiv | 0.93 | 2.52 | 3.403 (3) | 158 |
C6—H6···O2v | 0.93 | 2.39 | 3.141 (3) | 138 |
Symmetry codes: (ii) x−1, y, z; (iii) −x+1, y+1/2, −z+1/2; (iv) −x+1, y−1/2, −z+1/2; (v) x−1, −y+1/2, z+1/2. |
Selected bond lengths (Å) topCu1—O1 | 1.9792 (15) | Cu1—O1W | 2.4207 (16) |
Cu1—N2 | 1.9822 (18) | | |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O1i | 0.874 (19) | 1.993 (19) | 2.865 (2) | 175 (2) |
O1W—H1WB···O2ii | 0.872 (11) | 2.028 (15) | 2.878 (2) | 165 (3) |
C4—H4···O1Wiii | 0.930 | 2.52 | 3.403 (3) | 158 |
C6—H6···O2iv | 0.930 | 2.39 | 3.141 (3) | 138 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+1, y−1/2, −z+1/2; (iv) x−1, −y+1/2, z+1/2. |
The metal ion, the pyridazine ring and carboxylate atoms are coplanar. As expected, the Cu—O and Cu—N distances (Table 1) are similar to the Zn(II) and Co(II) analogue compounds (Gryz et al., 2004; Artetxe et al., 2013). Table 2 summarizes the geometrical parameters of the O—H···O and C—H···O hydrogen bonding interactions.