Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S2056989018010368/jj2200sup1.cif | |
Chemical Markup Language (CML) file https://doi.org/10.1107/S2056989018010368/jj2200Isup2.cml |
CCDC reference: 1820866
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.004 Å
- R factor = 0.049
- wR factor = 0.151
- Data-to-parameter ratio = 18.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT213_ALERT_2_C Atom C13 has ADP max/min Ratio ..... 3.1 prolat PLAT220_ALERT_2_C Non-Solvent Resd 1 C Ueq(max)/Ueq(min) Range 4.0 Ratio PLAT241_ALERT_2_C High 'MainMol' Ueq as Compared to Neighbors of C13 Check PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of C11 Check PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of C14 Check PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.8 Note PLAT717_ALERT_1_C D...A Unknown or Inconsistent Label .......... . Check
Alert level G PLAT005_ALERT_5_G No Embedded Refinement Details Found in the CIF Please Do ! PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 5 Report PLAT066_ALERT_1_G Predicted and Reported Tmin&Tmax Range Identical ? Check PLAT432_ALERT_2_G Short Inter X...Y Contact O1 ..C10 2.92 Ang. PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 5 Note
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 7 ALERT level C = Check. Ensure it is not caused by an omission or oversight 5 ALERT level G = General information/check it is not something unexpected 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 2 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2004); cell refinement: APEX2 and SAINT (Bruker, 2004); data reduction: SAINT and XPREP (Bruker, 2004); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
C9H10N5+·C7H7O3S− | F(000) = 752 |
Mr = 359.41 | Dx = 1.385 Mg m−3 Dm = 1.381 Mg m−3 Dm measured by Not Measured |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6410 reflections |
a = 11.0060 (6) Å | θ = 5.7–56.4° |
b = 20.7269 (11) Å | µ = 0.21 mm−1 |
c = 7.6213 (4) Å | T = 296 K |
β = 97.468 (2)° | Block, colourless |
V = 1723.83 (16) Å3 | 0.35 × 0.35 × 0.30 mm |
Z = 4 |
Bruker Kappa APEXII CCD diffractometer | 4273 independent reflections |
Radiation source: fine-focus sealed tube | 3325 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
Detector resolution: 18.4 pixels mm-1 | θmax = 28.3°, θmin = 2.7° |
ω and φ scan | h = −14→14 |
Absorption correction: multi-scan (SADABS; Bruker, 2004) | k = −27→24 |
Tmin = 0.929, Tmax = 0.939 | l = −9→10 |
20842 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.151 | H-atom parameters constrained |
S = 1.01 | w = 1/[σ2(Fo2) + (0.0845P)2 + 0.7378P] where P = (Fo2 + 2Fc2)/3 |
4277 reflections | (Δ/σ)max = 0.004 |
227 parameters | Δρmax = 0.49 e Å−3 |
0 restraints | Δρmin = −0.43 e Å−3 |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > 2sigma(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
S1 | 0.34811 (4) | 0.91624 (2) | 0.65382 (7) | 0.0341 (2) | |
N1 | 0.90645 (14) | 0.92499 (8) | 0.5823 (2) | 0.0331 (5) | |
N2 | 1.04787 (14) | 0.97433 (9) | 0.7826 (2) | 0.0413 (5) | |
N3 | 0.85035 (14) | 0.97568 (8) | 0.8454 (2) | 0.0328 (5) | |
N4 | 0.64605 (15) | 0.97966 (9) | 0.8776 (2) | 0.0449 (6) | |
N5 | 0.70324 (13) | 0.92814 (7) | 0.6349 (2) | 0.0306 (4) | |
O1 | 0.24577 (13) | 0.95410 (7) | 0.5729 (2) | 0.0463 (5) | |
O2 | 0.45015 (13) | 0.91551 (8) | 0.5499 (2) | 0.0506 (5) | |
O3 | 0.38962 (15) | 0.93469 (8) | 0.8365 (2) | 0.0519 (5) | |
C8 | 0.73449 (16) | 0.96182 (9) | 0.7882 (2) | 0.0313 (5) | |
C9 | 0.93250 (16) | 0.95848 (9) | 0.7378 (2) | 0.0307 (5) | |
C10 | 0.79160 (16) | 0.91143 (8) | 0.5351 (2) | 0.0295 (5) | |
C11 | 0.75537 (17) | 0.87572 (10) | 0.3686 (3) | 0.0347 (5) | |
C12 | 0.8406 (2) | 0.83807 (18) | 0.3023 (4) | 0.0817 (13) | |
C13 | 0.8094 (3) | 0.8038 (2) | 0.1478 (5) | 0.1184 (18) | |
C14 | 0.6952 (3) | 0.80698 (17) | 0.0582 (4) | 0.0729 (10) | |
C15 | 0.6098 (2) | 0.84433 (17) | 0.1229 (3) | 0.0669 (9) | |
C16 | 0.6392 (2) | 0.87874 (14) | 0.2786 (3) | 0.0541 (8) | |
C1 | 0.1803 (4) | 0.63794 (13) | 0.6294 (4) | 0.0804 (13) | |
C2 | 0.2180 (3) | 0.70767 (11) | 0.6442 (3) | 0.0510 (8) | |
C3 | 0.1408 (2) | 0.75664 (11) | 0.5771 (3) | 0.0518 (8) | |
C4 | 0.17777 (18) | 0.82075 (10) | 0.5852 (3) | 0.0407 (6) | |
C5 | 0.29530 (17) | 0.83591 (9) | 0.6579 (2) | 0.0318 (5) | |
C6 | 0.3336 (3) | 0.72421 (12) | 0.7230 (3) | 0.0560 (8) | |
C7 | 0.3737 (2) | 0.78743 (11) | 0.7282 (3) | 0.0478 (7) | |
H2N4 | 0.66290 | 1.00070 | 0.97500 | 0.0540* | |
H1N4 | 0.57120 | 0.97030 | 0.83880 | 0.0540* | |
H2N2 | 1.06960 | 0.99530 | 0.87890 | 0.0500* | |
H1N2 | 1.10170 | 0.96380 | 0.71550 | 0.0500* | |
H1N5 | 0.62810 | 0.91760 | 0.60200 | 0.0370* | |
H12 | 0.91980 | 0.83550 | 0.36160 | 0.0980* | |
H13 | 0.86800 | 0.77810 | 0.10440 | 0.1420* | |
H14 | 0.67540 | 0.78390 | −0.04630 | 0.0870* | |
H15 | 0.53090 | 0.84680 | 0.06220 | 0.0800* | |
H16 | 0.58000 | 0.90400 | 0.32220 | 0.0650* | |
H1A | 0.21910 | 0.61750 | 0.53820 | 0.1200* | |
H1B | 0.09300 | 0.63520 | 0.60040 | 0.1200* | |
H1C | 0.20480 | 0.61660 | 0.74020 | 0.1200* | |
H3 | 0.06200 | 0.74650 | 0.52500 | 0.0620* | |
H4 | 0.12350 | 0.85320 | 0.54190 | 0.0490* | |
H6 | 0.38570 | 0.69210 | 0.77390 | 0.0670* | |
H7 | 0.45300 | 0.79740 | 0.77850 | 0.0570* |
U11 | U22 | U33 | U12 | U13 | U23 | |
S1 | 0.0234 (2) | 0.0389 (3) | 0.0409 (3) | −0.0040 (2) | 0.0079 (2) | −0.0090 (2) |
N1 | 0.0236 (7) | 0.0420 (9) | 0.0334 (8) | 0.0026 (6) | 0.0021 (6) | −0.0055 (6) |
N2 | 0.0245 (8) | 0.0586 (11) | 0.0406 (9) | −0.0045 (7) | 0.0039 (7) | −0.0133 (8) |
N3 | 0.0253 (7) | 0.0397 (9) | 0.0335 (8) | −0.0046 (6) | 0.0041 (6) | −0.0066 (6) |
N4 | 0.0271 (8) | 0.0616 (12) | 0.0476 (10) | −0.0097 (7) | 0.0107 (7) | −0.0249 (8) |
N5 | 0.0222 (7) | 0.0370 (8) | 0.0325 (8) | −0.0047 (6) | 0.0035 (6) | −0.0067 (6) |
O1 | 0.0344 (8) | 0.0381 (8) | 0.0674 (10) | 0.0022 (6) | 0.0108 (7) | 0.0063 (7) |
O2 | 0.0286 (7) | 0.0702 (11) | 0.0558 (10) | −0.0100 (7) | 0.0157 (7) | −0.0144 (8) |
O3 | 0.0491 (9) | 0.0605 (10) | 0.0462 (9) | −0.0117 (8) | 0.0070 (7) | −0.0225 (8) |
C8 | 0.0267 (9) | 0.0337 (9) | 0.0341 (9) | −0.0044 (7) | 0.0062 (7) | −0.0047 (7) |
C9 | 0.0248 (8) | 0.0346 (9) | 0.0321 (9) | 0.0003 (7) | 0.0013 (7) | −0.0009 (7) |
C10 | 0.0254 (8) | 0.0310 (8) | 0.0316 (9) | 0.0018 (6) | 0.0018 (7) | −0.0023 (7) |
C11 | 0.0289 (9) | 0.0420 (10) | 0.0331 (9) | 0.0006 (8) | 0.0032 (7) | −0.0071 (8) |
C12 | 0.0373 (13) | 0.125 (3) | 0.078 (2) | 0.0236 (15) | −0.0105 (13) | −0.062 (2) |
C13 | 0.0559 (18) | 0.187 (4) | 0.107 (3) | 0.037 (2) | −0.0091 (17) | −0.106 (3) |
C14 | 0.0574 (16) | 0.104 (2) | 0.0551 (16) | 0.0007 (15) | −0.0010 (12) | −0.0444 (16) |
C15 | 0.0394 (13) | 0.115 (2) | 0.0445 (13) | −0.0081 (14) | −0.0015 (10) | −0.0290 (15) |
C16 | 0.0315 (11) | 0.0896 (19) | 0.0411 (12) | 0.0025 (11) | 0.0040 (9) | −0.0221 (12) |
C1 | 0.127 (3) | 0.0380 (13) | 0.082 (2) | −0.0115 (15) | 0.036 (2) | −0.0056 (13) |
C2 | 0.0741 (17) | 0.0371 (11) | 0.0458 (12) | −0.0021 (11) | 0.0234 (12) | −0.0037 (9) |
C3 | 0.0452 (12) | 0.0456 (12) | 0.0647 (15) | −0.0135 (10) | 0.0078 (11) | −0.0042 (11) |
C4 | 0.0290 (9) | 0.0396 (11) | 0.0525 (12) | −0.0024 (8) | 0.0014 (8) | 0.0017 (9) |
C5 | 0.0291 (9) | 0.0363 (9) | 0.0302 (9) | 0.0009 (7) | 0.0046 (7) | −0.0066 (7) |
C6 | 0.0739 (17) | 0.0424 (12) | 0.0526 (14) | 0.0203 (12) | 0.0120 (12) | 0.0052 (10) |
C7 | 0.0408 (12) | 0.0542 (13) | 0.0454 (12) | 0.0129 (10) | −0.0057 (9) | −0.0053 (10) |
S1—O1 | 1.4437 (15) | C14—C15 | 1.359 (4) |
S1—O2 | 1.4560 (15) | C15—C16 | 1.386 (4) |
S1—O3 | 1.4588 (16) | C12—H12 | 0.9300 |
S1—C5 | 1.7651 (19) | C13—H13 | 0.9300 |
N1—C10 | 1.299 (2) | C14—H14 | 0.9300 |
N1—C9 | 1.371 (2) | C15—H15 | 0.9300 |
N2—C9 | 1.313 (2) | C16—H16 | 0.9300 |
N3—C8 | 1.324 (2) | C1—C2 | 1.504 (4) |
N3—C9 | 1.345 (2) | C2—C3 | 1.379 (3) |
N4—C8 | 1.312 (2) | C2—C6 | 1.378 (4) |
N5—C10 | 1.355 (2) | C3—C4 | 1.389 (3) |
N5—C8 | 1.366 (2) | C4—C5 | 1.376 (3) |
N2—H2N2 | 0.8600 | C5—C7 | 1.386 (3) |
N2—H1N2 | 0.8600 | C6—C7 | 1.382 (3) |
N4—H2N4 | 0.8600 | C1—H1A | 0.9600 |
N4—H1N4 | 0.8600 | C1—H1B | 0.9600 |
N5—H1N5 | 0.8600 | C1—H1C | 0.9600 |
C10—C11 | 1.478 (3) | C3—H3 | 0.9300 |
C11—C12 | 1.367 (4) | C4—H4 | 0.9300 |
C11—C16 | 1.372 (3) | C6—H6 | 0.9300 |
C12—C13 | 1.380 (5) | C7—H7 | 0.9300 |
C13—C14 | 1.352 (5) | ||
O1—S1—O2 | 112.79 (9) | C11—C12—H12 | 120.00 |
O1—S1—O3 | 113.29 (9) | C13—C12—H12 | 120.00 |
O1—S1—C5 | 106.25 (9) | C12—C13—H13 | 119.00 |
O2—S1—O3 | 110.72 (9) | C14—C13—H13 | 119.00 |
O2—S1—C5 | 106.19 (9) | C15—C14—H14 | 120.00 |
O3—S1—C5 | 107.07 (9) | C13—C14—H14 | 120.00 |
C9—N1—C10 | 115.81 (15) | C14—C15—H15 | 120.00 |
C8—N3—C9 | 115.88 (15) | C16—C15—H15 | 120.00 |
C8—N5—C10 | 119.43 (15) | C15—C16—H16 | 120.00 |
C9—N2—H1N2 | 120.00 | C11—C16—H16 | 120.00 |
C9—N2—H2N2 | 120.00 | C1—C2—C3 | 121.9 (3) |
H2N2—N2—H1N2 | 120.00 | C1—C2—C6 | 120.1 (3) |
C8—N4—H1N4 | 120.00 | C3—C2—C6 | 117.9 (2) |
H2N4—N4—H1N4 | 120.00 | C2—C3—C4 | 121.7 (2) |
C8—N4—H2N4 | 120.00 | C3—C4—C5 | 119.42 (19) |
C10—N5—H1N5 | 120.00 | S1—C5—C4 | 120.19 (15) |
C8—N5—H1N5 | 120.00 | S1—C5—C7 | 120.05 (15) |
N3—C8—N4 | 121.04 (16) | C4—C5—C7 | 119.71 (18) |
N4—C8—N5 | 117.84 (16) | C2—C6—C7 | 121.5 (2) |
N3—C8—N5 | 121.13 (16) | C5—C7—C6 | 119.7 (2) |
N1—C9—N2 | 115.97 (16) | C2—C1—H1A | 110.00 |
N1—C9—N3 | 125.41 (16) | C2—C1—H1B | 109.00 |
N2—C9—N3 | 118.62 (15) | C2—C1—H1C | 109.00 |
N1—C10—N5 | 122.18 (15) | H1A—C1—H1B | 109.00 |
N5—C10—C11 | 118.46 (16) | H1A—C1—H1C | 109.00 |
N1—C10—C11 | 119.35 (16) | H1B—C1—H1C | 109.00 |
C12—C11—C16 | 118.8 (2) | C2—C3—H3 | 119.00 |
C10—C11—C12 | 118.80 (19) | C4—C3—H3 | 119.00 |
C10—C11—C16 | 122.43 (19) | C3—C4—H4 | 120.00 |
C11—C12—C13 | 120.2 (2) | C5—C4—H4 | 120.00 |
C12—C13—C14 | 121.2 (3) | C2—C6—H6 | 119.00 |
C13—C14—C15 | 119.1 (3) | C7—C6—H6 | 119.00 |
C14—C15—C16 | 120.6 (2) | C5—C7—H7 | 120.00 |
C11—C16—C15 | 120.2 (2) | C6—C7—H7 | 120.00 |
O1—S1—C5—C4 | 2.32 (18) | N1—C10—C11—C16 | −156.7 (2) |
O2—S1—C5—C4 | −118.00 (16) | N5—C10—C11—C12 | −155.5 (2) |
O3—S1—C5—C4 | 123.67 (16) | C16—C11—C12—C13 | −0.1 (4) |
O1—S1—C5—C7 | 179.78 (16) | C10—C11—C16—C15 | 180.0 (2) |
O2—S1—C5—C7 | 59.47 (17) | C10—C11—C12—C13 | 179.6 (3) |
O3—S1—C5—C7 | −58.87 (18) | C12—C11—C16—C15 | −0.3 (4) |
C10—N1—C9—N3 | 2.6 (3) | C11—C12—C13—C14 | 0.6 (6) |
C10—N1—C9—N2 | −177.59 (17) | C12—C13—C14—C15 | −0.5 (6) |
C9—N1—C10—N5 | −1.3 (2) | C13—C14—C15—C16 | 0.0 (5) |
C9—N1—C10—C11 | 179.67 (16) | C14—C15—C16—C11 | 0.4 (4) |
C8—N3—C9—N2 | 176.08 (17) | C1—C2—C6—C7 | 175.7 (2) |
C8—N3—C9—N1 | −4.1 (3) | C1—C2—C3—C4 | −177.5 (2) |
C9—N3—C8—N5 | 4.3 (3) | C6—C2—C3—C4 | 1.0 (4) |
C9—N3—C8—N4 | −176.10 (17) | C3—C2—C6—C7 | −2.9 (4) |
C10—N5—C8—N4 | 177.08 (16) | C2—C3—C4—C5 | 1.7 (3) |
C8—N5—C10—C11 | −179.23 (16) | C3—C4—C5—C7 | −2.5 (3) |
C10—N5—C8—N3 | −3.3 (3) | C3—C4—C5—S1 | 174.99 (16) |
C8—N5—C10—N1 | 1.7 (3) | S1—C5—C7—C6 | −176.79 (17) |
N5—C10—C11—C16 | 24.2 (3) | C4—C5—C7—C6 | 0.7 (3) |
N1—C10—C11—C12 | 23.6 (3) | C2—C6—C7—C5 | 2.1 (4) |
Cg1 and Cg3 are the centroids of the N1/C9/N3/C8/N5/C10 and C2–C5/C6/C7 rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
N4—H2N4···O3i | 0.86 | 2.10 | 2.877 (2) | 150 |
N4—H1N4···O3 | 0.86 | 2.13 | 2.950 (2) | 160 |
N2—H2N2···N3ii | 0.86 | 2.25 | 3.089 (2) | 164 |
N2—H1N2···O1iii | 0.86 | 2.05 | 2.895 (2) | 169 |
N5—H1N5···O2 | 0.86 | 1.95 | 2.789 (2) | 165 |
C16—H16···O2 | 0.93 | 2.40 | 3.210 (3) | 146 |
S1—O1···Cg1iv | 2.93 (1) | 4.1695 (8) | 142 (1) | |
Cg3—Cg3 | 3.9192 (13) |
Symmetry codes: (i) −x+1, −y+2, −z+2; (ii) −x+2, −y+2, −z+2; (iii) x+1, y, z; (iv) −x+1, −y+2, −z+1; (v) x, −y+3/2, z+1/2. |