The title compound, [Ni(C
5H
7O
2)
2(C
5H
5N)
2]·2H
2O, crystallizes with two half-molecules in the asymmetric unit. The Ni
II ion of each unique complex molecule lies on an inversion centre and has an octahedral coordination geometry. The crystal structure features weak O—H
O hydrogen bonds, which form chains running parallel to the
a axis.
Supporting information
CCDC reference: 925118
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.003 Å
- R factor = 0.034
- wR factor = 0.103
- Data-to-parameter ratio = 20.8
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C8
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 24
PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 5
Alert level G
PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF ?
PLAT007_ALERT_5_G Note: Number of Unrefined D-H Atoms ............ 4
PLAT042_ALERT_1_G Calc. and Reported MoietyFormula Strings Differ ?
PLAT153_ALERT_1_G The su's on the Cell Axes are Equal .......... 0.00500 Ang.
PLAT232_ALERT_2_G Hirshfeld Test Diff (M-X) Ni1 -- O1 .. 5.4 su
PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 6
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 7
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
3 ALERT level C = Check. Ensure it is not caused by an omission or oversight
7 ALERT level G = General information/check it is not something unexpected
2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
2 ALERT type 5 Informative message, check
An amount of 0.075 g (0.5 mmol) of mercapto succinic acid was
dissolved in 2 ml of pyridine and 0,1374 g (0.5 mmol) of
nickel(II) acetylacetonate was dissolved in 10 ml methanol. The two solutions
were mixed and stirred for 15 min. The resulting solution was allowed to stand
at room temperature. After several days X-ray quality blue crystals were
obtained. A fragment cut from a larger crystal was used for data collection.
Water hydrogen atoms were tentatively found in the difference density Fourier
map and were refined with an isotropic displacement parameter 1.5 that of the
adjacent oxygen atom. The O—H distances were restrained to be 0.9 Å within
a standard deviation of 0.01 with Uiso(H) = 1.5 Ueq(O) and
the H···H contacts were restraint to 1.40 Å with a standard deviation of
0.02. All other Hydrogen atoms were placed in calculated positions with
C—H distances of 0.93–0.96 Å for aromatic H atoms with Uiso(H)
= 1.2 Ueq(C).
Data collection: APEX2 (Bruker, 2006); cell refinement: SAINT (Bruker, 2006); data reduction: SAINT (Bruker, 2006); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ATOMS (Dowty, 1995); software used to prepare material for publication: WinGX (Farrugia, 2012).
Bis(acetylacetonato-
κ2O,
O')bis(pyridine-
κN)nickel(II)
dihydrate
top
Crystal data top
[Ni(C5H7O2)2(C5H5N)2]·2H2O | F(000) = 952 |
Mr = 451.13 | Dx = 1.326 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9929 reflections |
a = 16.362 (5) Å | θ = 2.6–28.3° |
b = 14.476 (5) Å | µ = 0.89 mm−1 |
c = 9.543 (5) Å | T = 296 K |
β = 91.510 (5)° | Block, blue |
V = 2259.5 (16) Å3 | 0.15 × 0.12 × 0.10 mm |
Z = 4 | |
Data collection top
Bruker APEXII CCD diffractometer | 4298 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.018 |
Graphite monochromator | θmax = 28.3°, θmin = 1.2° |
Detector resolution: 18.4 pixels mm-1 | h = −21→21 |
ϕ and ω scans | k = −18→19 |
55078 measured reflections | l = −12→12 |
5587 independent reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.034 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.103 | H-atom parameters constrained |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0451P)2 + 0.9372P] where P = (Fo2 + 2Fc2)/3 |
5587 reflections | (Δ/σ)max < 0.001 |
269 parameters | Δρmax = 0.22 e Å−3 |
6 restraints | Δρmin = −0.25 e Å−3 |
Crystal data top
[Ni(C5H7O2)2(C5H5N)2]·2H2O | V = 2259.5 (16) Å3 |
Mr = 451.13 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 16.362 (5) Å | µ = 0.89 mm−1 |
b = 14.476 (5) Å | T = 296 K |
c = 9.543 (5) Å | 0.15 × 0.12 × 0.10 mm |
β = 91.510 (5)° | |
Data collection top
Bruker APEXII CCD diffractometer | 4298 reflections with I > 2σ(I) |
55078 measured reflections | Rint = 0.018 |
5587 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.034 | 6 restraints |
wR(F2) = 0.103 | H-atom parameters constrained |
S = 1.05 | Δρmax = 0.22 e Å−3 |
5587 reflections | Δρmin = −0.25 e Å−3 |
269 parameters | |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the rounded
fractional coordinates. All su's are estimated from the variances of the
(full) variance-covariance matrix. The cell e.s.d.'s are taken into account in
the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user
for potential systematic errors. Weighted R-factors wR and all
goodnesses of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The observed criterion of F2 > σ(F2)
is used only for calculating -R-factor-obs etc. and is not
relevant to the choice of reflections for refinement. R-factors based
on F2 are statistically about twice as large as those based on
F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Ni1 | 0.50000 | 0.50000 | 0.50000 | 0.0388 (1) | |
O1 | 0.59123 (8) | 0.40479 (9) | 0.52664 (13) | 0.0504 (4) | |
O2 | 0.47500 (7) | 0.45218 (9) | 0.30232 (12) | 0.0478 (4) | |
N1 | 0.41637 (9) | 0.40607 (11) | 0.58429 (15) | 0.0458 (4) | |
C1 | 0.43286 (13) | 0.36179 (16) | 0.7042 (2) | 0.0623 (7) | |
C2 | 0.38029 (16) | 0.29902 (19) | 0.7614 (3) | 0.0771 (9) | |
C3 | 0.30771 (15) | 0.27972 (18) | 0.6921 (3) | 0.0771 (9) | |
C4 | 0.29001 (13) | 0.32532 (18) | 0.5691 (2) | 0.0703 (8) | |
C5 | 0.34512 (11) | 0.38751 (15) | 0.5184 (2) | 0.0549 (6) | |
C6 | 0.68575 (14) | 0.28756 (18) | 0.4746 (3) | 0.0733 (8) | |
C7 | 0.61380 (11) | 0.34840 (14) | 0.43447 (19) | 0.0502 (6) | |
C8 | 0.57898 (14) | 0.33964 (17) | 0.3012 (2) | 0.0663 (8) | |
C9 | 0.51543 (12) | 0.39087 (14) | 0.24124 (18) | 0.0509 (6) | |
C10 | 0.49162 (19) | 0.3735 (2) | 0.0893 (2) | 0.0821 (9) | |
Ni2 | 0.00000 | 0.50000 | 0.50000 | 0.0454 (1) | |
O3 | 0.05752 (8) | 0.38202 (8) | 0.44348 (15) | 0.0548 (4) | |
O4 | −0.07630 (8) | 0.43023 (9) | 0.62668 (15) | 0.0553 (4) | |
N2 | 0.08437 (10) | 0.51694 (10) | 0.67131 (18) | 0.0518 (5) | |
C11 | 0.16473 (15) | 0.51415 (17) | 0.6544 (3) | 0.0696 (8) | |
C12 | 0.22079 (17) | 0.5225 (2) | 0.7630 (3) | 0.0834 (10) | |
C13 | 0.19364 (18) | 0.53429 (18) | 0.8970 (3) | 0.0774 (9) | |
C14 | 0.11092 (17) | 0.53708 (17) | 0.9161 (3) | 0.0722 (9) | |
C15 | 0.05890 (14) | 0.52919 (14) | 0.8021 (2) | 0.0602 (7) | |
C16 | 0.08741 (14) | 0.22314 (14) | 0.4275 (3) | 0.0663 (8) | |
C17 | 0.03892 (11) | 0.30288 (11) | 0.48564 (19) | 0.0464 (5) | |
C18 | −0.02264 (13) | 0.28323 (12) | 0.5796 (2) | 0.0552 (6) | |
C19 | −0.07502 (11) | 0.34409 (12) | 0.64369 (18) | 0.0449 (5) | |
C20 | −0.13618 (13) | 0.30541 (16) | 0.7449 (2) | 0.0629 (7) | |
O1W | 0.33029 (12) | 0.55261 (16) | 0.2056 (2) | 0.0998 (8) | |
O2W | 0.18999 (13) | 0.41332 (17) | 0.2490 (2) | 0.1108 (9) | |
H1 | 0.48220 | 0.37390 | 0.75120 | 0.0750* | |
H2 | 0.39370 | 0.27000 | 0.84590 | 0.0930* | |
H3 | 0.27140 | 0.23680 | 0.72780 | 0.0930* | |
H4 | 0.24100 | 0.31420 | 0.52040 | 0.0840* | |
H5 | 0.33240 | 0.41800 | 0.43490 | 0.0660* | |
H6A | 0.68450 | 0.27370 | 0.57290 | 0.1100* | |
H6B | 0.73570 | 0.31920 | 0.45470 | 0.1100* | |
H6C | 0.68270 | 0.23120 | 0.42180 | 0.1100* | |
H8 | 0.60090 | 0.29390 | 0.24500 | 0.0800* | |
H10A | 0.43520 | 0.38940 | 0.07350 | 0.1230* | |
H10B | 0.49960 | 0.30950 | 0.06770 | 0.1230* | |
H10C | 0.52500 | 0.41070 | 0.03030 | 0.1230* | |
H11 | 0.18390 | 0.50610 | 0.56430 | 0.0840* | |
H12 | 0.27650 | 0.52020 | 0.74620 | 0.1000* | |
H13 | 0.23040 | 0.54020 | 0.97250 | 0.0930* | |
H14 | 0.09040 | 0.54420 | 1.00550 | 0.0870* | |
H15 | 0.00300 | 0.53250 | 0.81620 | 0.0720* | |
H16A | 0.12230 | 0.24540 | 0.35560 | 0.0990* | |
H16B | 0.05050 | 0.17770 | 0.38880 | 0.0990* | |
H16C | 0.12020 | 0.19580 | 0.50150 | 0.0990* | |
H18 | −0.02930 | 0.22120 | 0.60200 | 0.0660* | |
H20A | −0.18290 | 0.34540 | 0.74740 | 0.0940* | |
H20B | −0.11120 | 0.30130 | 0.83690 | 0.0940* | |
H20C | −0.15310 | 0.24500 | 0.71440 | 0.0940* | |
H11W | 0.35400 | 0.50780 | 0.17200 | 0.1500* | |
H22W | 0.35500 | 0.57180 | 0.27800 | 0.1500* | |
H1W | 0.15010 | 0.41390 | 0.30310 | 0.1660* | |
H2W | 0.20310 | 0.47070 | 0.25810 | 0.1660* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Ni1 | 0.0400 (2) | 0.0425 (2) | 0.0336 (2) | 0.0005 (1) | −0.0026 (1) | −0.0044 (1) |
O1 | 0.0492 (7) | 0.0560 (7) | 0.0456 (6) | 0.0076 (6) | −0.0067 (5) | −0.0061 (6) |
O2 | 0.0511 (7) | 0.0537 (7) | 0.0383 (6) | 0.0006 (6) | −0.0061 (5) | −0.0068 (5) |
N1 | 0.0468 (8) | 0.0504 (8) | 0.0402 (7) | −0.0042 (6) | −0.0011 (6) | −0.0032 (6) |
C1 | 0.0618 (12) | 0.0696 (13) | 0.0550 (11) | −0.0134 (10) | −0.0092 (9) | 0.0098 (10) |
C2 | 0.0854 (17) | 0.0819 (17) | 0.0640 (13) | −0.0222 (13) | 0.0003 (12) | 0.0185 (12) |
C3 | 0.0743 (15) | 0.0784 (16) | 0.0795 (15) | −0.0278 (13) | 0.0189 (12) | 0.0000 (13) |
C4 | 0.0523 (11) | 0.0885 (16) | 0.0700 (13) | −0.0208 (11) | 0.0018 (10) | −0.0099 (12) |
C5 | 0.0479 (10) | 0.0685 (12) | 0.0480 (9) | −0.0059 (9) | −0.0016 (8) | −0.0052 (9) |
C6 | 0.0612 (13) | 0.0821 (16) | 0.0767 (14) | 0.0246 (12) | 0.0031 (11) | 0.0002 (12) |
C7 | 0.0452 (9) | 0.0539 (10) | 0.0517 (10) | 0.0038 (8) | 0.0076 (7) | −0.0003 (8) |
C8 | 0.0707 (13) | 0.0781 (15) | 0.0503 (11) | 0.0186 (11) | 0.0041 (9) | −0.0187 (10) |
C9 | 0.0597 (11) | 0.0565 (11) | 0.0366 (8) | −0.0056 (9) | 0.0031 (7) | −0.0058 (8) |
C10 | 0.117 (2) | 0.0896 (17) | 0.0392 (10) | 0.0126 (15) | −0.0071 (11) | −0.0138 (11) |
Ni2 | 0.0479 (2) | 0.0291 (2) | 0.0602 (2) | 0.0021 (1) | 0.0166 (2) | 0.0029 (1) |
O3 | 0.0569 (8) | 0.0353 (6) | 0.0730 (9) | 0.0058 (5) | 0.0172 (6) | −0.0004 (6) |
O4 | 0.0558 (7) | 0.0408 (7) | 0.0703 (8) | −0.0018 (6) | 0.0198 (6) | 0.0068 (6) |
N2 | 0.0554 (9) | 0.0389 (7) | 0.0615 (9) | 0.0026 (6) | 0.0120 (7) | 0.0016 (7) |
C11 | 0.0579 (13) | 0.0834 (16) | 0.0680 (14) | 0.0098 (11) | 0.0090 (10) | −0.0047 (11) |
C12 | 0.0616 (14) | 0.102 (2) | 0.0864 (18) | 0.0118 (14) | −0.0030 (13) | −0.0064 (15) |
C13 | 0.0899 (18) | 0.0682 (15) | 0.0734 (15) | 0.0006 (13) | −0.0124 (13) | −0.0001 (12) |
C14 | 0.0941 (18) | 0.0618 (13) | 0.0613 (13) | −0.0074 (13) | 0.0111 (12) | −0.0023 (11) |
C15 | 0.0655 (13) | 0.0493 (10) | 0.0667 (13) | −0.0038 (9) | 0.0165 (10) | −0.0018 (9) |
C16 | 0.0661 (13) | 0.0401 (10) | 0.0920 (16) | 0.0103 (9) | −0.0103 (11) | −0.0159 (10) |
C17 | 0.0490 (9) | 0.0346 (8) | 0.0549 (10) | 0.0015 (7) | −0.0133 (7) | −0.0053 (7) |
C18 | 0.0684 (12) | 0.0327 (8) | 0.0644 (11) | −0.0072 (8) | −0.0026 (9) | 0.0044 (8) |
C19 | 0.0475 (9) | 0.0425 (9) | 0.0442 (9) | −0.0102 (7) | −0.0103 (7) | 0.0058 (7) |
C20 | 0.0660 (12) | 0.0641 (13) | 0.0586 (11) | −0.0177 (10) | 0.0023 (9) | 0.0164 (10) |
O1W | 0.0906 (13) | 0.1176 (17) | 0.0896 (13) | 0.0192 (12) | −0.0296 (10) | −0.0028 (12) |
O2W | 0.1004 (15) | 0.1241 (18) | 0.1093 (16) | 0.0189 (13) | 0.0298 (12) | −0.0021 (13) |
Geometric parameters (Å, º) top
Ni1—O1 | 2.0427 (17) | C1—H1 | 0.9300 |
Ni1—O2 | 2.0407 (16) | C2—H2 | 0.9300 |
Ni1—N1 | 2.1039 (19) | C3—H3 | 0.9300 |
Ni1—O1i | 2.0427 (17) | C4—H4 | 0.9300 |
Ni1—O2i | 2.0407 (16) | C5—H5 | 0.9300 |
Ni1—N1i | 2.1039 (19) | C6—H6A | 0.9600 |
Ni2—N2ii | 2.126 (2) | C6—H6C | 0.9600 |
Ni2—N2 | 2.126 (2) | C6—H6B | 0.9600 |
Ni2—O3 | 2.0299 (16) | C8—H8 | 0.9300 |
Ni2—O4 | 2.0297 (17) | C10—H10B | 0.9600 |
Ni2—O3ii | 2.0298 (16) | C10—H10A | 0.9600 |
Ni2—O4ii | 2.0297 (17) | C10—H10C | 0.9600 |
O1—C7 | 1.262 (2) | C11—C12 | 1.371 (4) |
O2—C9 | 1.259 (2) | C12—C13 | 1.375 (4) |
O3—C17 | 1.254 (2) | C13—C14 | 1.371 (4) |
O4—C19 | 1.258 (2) | C14—C15 | 1.368 (4) |
O1W—H22W | 0.8400 | C16—C17 | 1.514 (3) |
O1W—H11W | 0.8300 | C17—C18 | 1.395 (3) |
O2W—H2W | 0.8600 | C18—C19 | 1.383 (3) |
O2W—H1W | 0.8400 | C19—C20 | 1.516 (3) |
N1—C5 | 1.337 (2) | C11—H11 | 0.9300 |
N1—C1 | 1.333 (3) | C12—H12 | 0.9300 |
N2—C11 | 1.330 (3) | C13—H13 | 0.9300 |
N2—C15 | 1.338 (3) | C14—H14 | 0.9300 |
C1—C2 | 1.374 (4) | C15—H15 | 0.9300 |
C2—C3 | 1.373 (4) | C16—H16A | 0.9600 |
C3—C4 | 1.371 (4) | C16—H16B | 0.9600 |
C4—C5 | 1.371 (3) | C16—H16C | 0.9600 |
C6—C7 | 1.511 (3) | C18—H18 | 0.9300 |
C7—C8 | 1.386 (3) | C20—H20B | 0.9600 |
C8—C9 | 1.388 (3) | C20—H20C | 0.9600 |
C9—C10 | 1.513 (3) | C20—H20A | 0.9600 |
| | | |
Ni1···O1W | 3.972 (3) | N2···O4ii | 2.944 (3) |
Ni1···O1Wi | 3.972 (3) | N2···O3 | 2.947 (3) |
Ni1···H22W | 3.3100 | N2···O3ii | 2.932 (3) |
Ni1···H22Wi | 3.3100 | C2···C10vi | 3.523 (4) |
Ni2···H1Wii | 3.3700 | C2···C9vi | 3.536 (4) |
Ni2···H1W | 3.3700 | C4···C11 | 3.525 (4) |
O1···N1 | 2.928 (2) | C9···C2v | 3.536 (4) |
O1···O2 | 2.908 (2) | C10···C2v | 3.523 (4) |
O1···N1i | 2.937 (3) | C11···C4 | 3.525 (4) |
O1···O1Wi | 2.896 (3) | C1···H10Bvi | 3.0200 |
O1···O2i | 2.867 (2) | C4···H2v | 3.0800 |
O1···C9 | 2.970 (3) | C5···H2v | 2.9300 |
O1···C5i | 3.215 (3) | C7···H22Wi | 3.0100 |
O1···C1 | 3.195 (3) | C10···H11W | 3.0900 |
O1W···Ni1 | 3.972 (3) | C14···H18vii | 2.9800 |
O1W···O2 | 2.908 (3) | C15···H18vii | 2.9700 |
O1W···O2W | 3.092 (4) | C16···H4 | 2.9500 |
O1W···Ni1 | 3.972 (3) | C17···H1W | 3.0200 |
O1W···O1i | 2.896 (3) | C18···H20Bv | 2.9600 |
O2···O1W | 2.908 (3) | C19···H16Bvi | 3.0900 |
O2···C7 | 2.976 (3) | H1···O2i | 2.6700 |
O2···O1 | 2.908 (2) | H1···O1 | 2.8600 |
O2···C1i | 3.088 (3) | H1W···O3 | 2.1000 |
O2···N1 | 2.957 (2) | H1W···C17 | 3.0200 |
O2···C5 | 3.143 (3) | H1W···Ni2 | 3.3700 |
O2···O1i | 2.867 (2) | H1W···O4ii | 2.6500 |
O2···N1i | 2.905 (2) | H1W···H16A | 2.5300 |
O2W···O1W | 3.092 (4) | H1W···Ni2 | 3.3700 |
O2W···O4ii | 3.180 (3) | H2···C4vi | 3.0800 |
O2W···O3 | 2.926 (3) | H2···C5vi | 2.9300 |
O3···N2ii | 2.932 (3) | H2W···O4ii | 2.7700 |
O3···O4 | 2.922 (2) | H2W···O1W | 2.4600 |
O3···C19 | 2.979 (3) | H3···O2Wvi | 2.5600 |
O3···O2W | 2.926 (3) | H4···C16 | 2.9500 |
O3···C11 | 3.256 (3) | H5···O2W | 2.8900 |
O3···O4ii | 2.818 (2) | H5···O1i | 2.8700 |
O3···N2 | 2.947 (3) | H5···O2 | 2.7300 |
O3···C15ii | 3.246 (3) | H6A···H8vi | 2.3800 |
O4···N2 | 2.934 (3) | H6C···O1Wviii | 2.8600 |
O4···O3ii | 2.818 (2) | H6C···H8 | 2.3100 |
O4···C17 | 2.983 (3) | H8···H10B | 2.3500 |
O4···C15 | 3.091 (3) | H8···H6Av | 2.3800 |
O4···O2Wii | 3.180 (3) | H8···H6C | 2.3100 |
O4···N2ii | 2.944 (3) | H10A···H11W | 2.3800 |
O4···O3 | 2.922 (2) | H10B···C1v | 3.0200 |
O4···C11ii | 3.120 (4) | H10B···H8 | 2.3500 |
O1···H22Wi | 2.0700 | H11···O4ii | 2.6600 |
O1···H5i | 2.8700 | H11W···O2 | 2.4500 |
O1···H1 | 2.8600 | H11W···C10 | 3.0900 |
O1W···H6Ciii | 2.8600 | H11W···H10A | 2.3800 |
O1W···H20Aii | 2.8700 | H13···O1Wix | 2.7300 |
O1W···H13iv | 2.7300 | H14···H15x | 2.5700 |
O1W···H2W | 2.4600 | H15···H14x | 2.5700 |
O2···H1i | 2.6700 | H15···O4 | 2.6500 |
O2···H22W | 2.6200 | H15···O3ii | 2.9200 |
O2···H11W | 2.4500 | H16A···O2W | 2.8700 |
O2···H5 | 2.7300 | H16A···H1W | 2.5300 |
O2W···H5 | 2.8900 | H16B···C19v | 3.0900 |
O2W···H3v | 2.5600 | H16B···H18 | 2.5300 |
O2W···H16A | 2.8700 | H18···C15xi | 2.9700 |
O3···H1W | 2.1000 | H18···C14xi | 2.9800 |
O3···H15ii | 2.9200 | H18···H16B | 2.5300 |
O4···H15 | 2.6500 | H18···H20C | 2.3400 |
O4···H1Wii | 2.6500 | H20A···O1Wii | 2.8700 |
O4···H11ii | 2.6600 | H20B···C18vi | 2.9600 |
O4···H2Wii | 2.7700 | H20C···H18 | 2.3400 |
N1···O1 | 2.928 (2) | H22W···C7i | 3.0100 |
N1···O2 | 2.957 (2) | H22W···Ni1 | 3.3100 |
N1···O1i | 2.937 (3) | H22W···O2 | 2.6200 |
N1···O2i | 2.905 (2) | H22W···Ni1 | 3.3100 |
N2···O4 | 2.934 (3) | H22W···O1i | 2.0700 |
| | | |
O1—Ni1—O2 | 90.81 (5) | C3—C2—H2 | 120.00 |
O1—Ni1—N1 | 89.82 (6) | C4—C3—H3 | 121.00 |
O1—Ni1—O1i | 180.00 | C2—C3—H3 | 121.00 |
O1—Ni1—O2i | 89.19 (5) | C3—C4—H4 | 120.00 |
O1—Ni1—N1i | 90.18 (6) | C5—C4—H4 | 120.00 |
O2—Ni1—N1 | 91.01 (5) | C4—C5—H5 | 119.00 |
O1i—Ni1—O2 | 89.19 (5) | N1—C5—H5 | 119.00 |
O2—Ni1—O2i | 180.00 | H6A—C6—H6B | 109.00 |
O2—Ni1—N1i | 88.99 (5) | H6A—C6—H6C | 109.00 |
O1i—Ni1—N1 | 90.18 (6) | C7—C6—H6A | 109.00 |
O2i—Ni1—N1 | 88.99 (5) | C7—C6—H6B | 109.00 |
N1—Ni1—N1i | 180.00 | H6B—C6—H6C | 110.00 |
O1i—Ni1—O2i | 90.81 (5) | C7—C6—H6C | 109.00 |
O1i—Ni1—N1i | 89.82 (6) | C7—C8—H8 | 116.00 |
O2i—Ni1—N1i | 91.01 (5) | C9—C8—H8 | 116.00 |
O4—Ni2—N2 | 89.80 (6) | H10A—C10—H10C | 109.00 |
O3ii—Ni2—O4 | 87.92 (5) | H10B—C10—H10C | 109.00 |
O4—Ni2—O4ii | 180.00 | C9—C10—H10C | 109.00 |
O4—Ni2—N2ii | 90.20 (6) | H10A—C10—H10B | 110.00 |
O3ii—Ni2—N2 | 89.70 (6) | C9—C10—H10A | 109.00 |
O4ii—Ni2—N2 | 90.20 (6) | C9—C10—H10B | 109.00 |
N2—Ni2—N2ii | 180.00 | N2—C11—C12 | 123.3 (3) |
O3ii—Ni2—O4ii | 92.08 (5) | C11—C12—C13 | 119.2 (3) |
O3ii—Ni2—N2ii | 90.30 (6) | C12—C13—C14 | 118.1 (3) |
O4ii—Ni2—N2ii | 89.80 (6) | C13—C14—C15 | 119.2 (3) |
O3—Ni2—O4 | 92.08 (5) | N2—C15—C14 | 123.4 (2) |
O3—Ni2—N2 | 90.30 (6) | C16—C17—C18 | 118.30 (16) |
O3—Ni2—O3ii | 180.00 | O3—C17—C18 | 125.29 (16) |
O3—Ni2—O4ii | 87.92 (5) | O3—C17—C16 | 116.41 (17) |
O3—Ni2—N2ii | 89.70 (6) | C17—C18—C19 | 128.36 (16) |
Ni1—O1—C7 | 125.16 (12) | O4—C19—C20 | 116.07 (16) |
Ni1—O2—C9 | 124.90 (11) | O4—C19—C18 | 125.66 (17) |
Ni2—O3—C17 | 124.41 (12) | C18—C19—C20 | 118.27 (17) |
Ni2—O4—C19 | 124.19 (12) | C12—C11—H11 | 118.00 |
H11W—O1W—H22W | 111.00 | N2—C11—H11 | 118.00 |
H1W—O2W—H2W | 97.00 | C13—C12—H12 | 120.00 |
Ni1—N1—C1 | 121.33 (13) | C11—C12—H12 | 120.00 |
Ni1—N1—C5 | 121.19 (13) | C14—C13—H13 | 121.00 |
C1—N1—C5 | 117.47 (17) | C12—C13—H13 | 121.00 |
Ni2—N2—C15 | 121.38 (14) | C13—C14—H14 | 120.00 |
C11—N2—C15 | 116.8 (2) | C15—C14—H14 | 120.00 |
Ni2—N2—C11 | 121.83 (16) | N2—C15—H15 | 118.00 |
N1—C1—C2 | 123.0 (2) | C14—C15—H15 | 118.00 |
C1—C2—C3 | 119.1 (2) | C17—C16—H16C | 109.00 |
C2—C3—C4 | 118.4 (2) | H16A—C16—H16B | 110.00 |
C3—C4—C5 | 119.5 (2) | C17—C16—H16B | 109.00 |
N1—C5—C4 | 122.63 (18) | H16B—C16—H16C | 110.00 |
C6—C7—C8 | 118.55 (19) | H16A—C16—H16C | 109.00 |
O1—C7—C8 | 125.31 (18) | C17—C16—H16A | 109.00 |
O1—C7—C6 | 116.13 (18) | C17—C18—H18 | 116.00 |
C7—C8—C9 | 127.9 (2) | C19—C18—H18 | 116.00 |
O2—C9—C10 | 115.84 (18) | C19—C20—H20B | 109.00 |
O2—C9—C8 | 125.64 (17) | C19—C20—H20C | 109.00 |
C8—C9—C10 | 118.52 (19) | H20A—C20—H20C | 109.00 |
N1—C1—H1 | 118.00 | H20B—C20—H20C | 109.00 |
C2—C1—H1 | 119.00 | H20A—C20—H20B | 110.00 |
C1—C2—H2 | 120.00 | C19—C20—H20A | 109.00 |
| | | |
O2—Ni1—O1—C7 | 2.88 (15) | Ni1—O1—C7—C6 | 176.78 (14) |
N1—Ni1—O1—C7 | 93.89 (15) | Ni1—O1—C7—C8 | −2.0 (3) |
O2i—Ni1—O1—C7 | −177.12 (15) | Ni1—O2—C9—C8 | 6.1 (3) |
N1i—Ni1—O1—C7 | −86.11 (15) | Ni1—O2—C9—C10 | −173.57 (15) |
O1—Ni1—O2—C9 | −4.80 (15) | Ni2—O3—C17—C18 | −1.4 (3) |
N1—Ni1—O2—C9 | −94.64 (15) | Ni2—O3—C17—C16 | 178.01 (14) |
O1i—Ni1—O2—C9 | 175.20 (15) | Ni2—O4—C19—C20 | 178.97 (12) |
N1i—Ni1—O2—C9 | 85.37 (15) | Ni2—O4—C19—C18 | −0.4 (3) |
O1—Ni1—N1—C1 | 49.00 (15) | C1—N1—C5—C4 | −0.3 (3) |
O2—Ni1—N1—C1 | 139.81 (15) | Ni1—N1—C1—C2 | −179.04 (18) |
O1i—Ni1—N1—C1 | −131.00 (15) | Ni1—N1—C5—C4 | 178.68 (16) |
O2i—Ni1—N1—C1 | −40.19 (15) | C5—N1—C1—C2 | 0.0 (3) |
O1—Ni1—N1—C5 | −129.99 (15) | Ni2—N2—C11—C12 | −178.3 (2) |
O2—Ni1—N1—C5 | −39.18 (15) | C15—N2—C11—C12 | 0.4 (3) |
O1i—Ni1—N1—C5 | 50.01 (15) | C11—N2—C15—C14 | −1.2 (3) |
O2i—Ni1—N1—C5 | 140.82 (15) | Ni2—N2—C15—C14 | 177.59 (17) |
O4ii—Ni2—N2—C15 | 145.01 (15) | N1—C1—C2—C3 | 0.7 (4) |
O4—Ni2—O3—C17 | 1.15 (15) | C1—C2—C3—C4 | −1.1 (4) |
N2—Ni2—O3—C17 | 90.97 (15) | C2—C3—C4—C5 | 0.7 (4) |
O4ii—Ni2—O3—C17 | −178.85 (15) | C3—C4—C5—N1 | 0.0 (3) |
N2ii—Ni2—O3—C17 | −89.04 (15) | O1—C7—C8—C9 | 1.8 (4) |
O3—Ni2—O4—C19 | −0.32 (15) | C6—C7—C8—C9 | −177.0 (2) |
N2—Ni2—O4—C19 | −90.61 (15) | C7—C8—C9—C10 | 175.5 (2) |
O3ii—Ni2—O4—C19 | 179.68 (15) | C7—C8—C9—O2 | −4.1 (4) |
N2ii—Ni2—O4—C19 | 89.39 (15) | N2—C11—C12—C13 | 0.1 (4) |
O3—Ni2—N2—C11 | 51.62 (16) | C11—C12—C13—C14 | 0.1 (4) |
O4—Ni2—N2—C11 | 143.71 (16) | C12—C13—C14—C15 | −0.8 (4) |
O3ii—Ni2—N2—C11 | −128.38 (16) | C13—C14—C15—N2 | 1.4 (4) |
O4ii—Ni2—N2—C11 | −36.29 (16) | O3—C17—C18—C19 | 0.5 (3) |
O3—Ni2—N2—C15 | −127.07 (15) | C16—C17—C18—C19 | −178.9 (2) |
O4—Ni2—N2—C15 | −34.99 (15) | C17—C18—C19—C20 | −178.79 (19) |
O3ii—Ni2—N2—C15 | 52.93 (15) | C17—C18—C19—O4 | 0.5 (3) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x, −y+1, −z+1; (iii) −x+1, y+1/2, −z+1/2; (iv) x, y, z−1; (v) x, −y+1/2, z−1/2; (vi) x, −y+1/2, z+1/2; (vii) −x, y+1/2, −z+3/2; (viii) −x+1, y−1/2, −z+1/2; (ix) x, y, z+1; (x) −x, −y+1, −z+2; (xi) −x, y−1/2, −z+3/2. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2W—H1W···O3 | 0.84 | 2.10 | 2.926 (3) | 166 |
O2W—H2W···O1W | 0.86 | 2.46 | 3.092 (4) | 131 |
O1W—H11W···O2 | 0.83 | 2.45 | 2.908 (3) | 116 |
O1W—H22W···O1i | 0.84 | 2.07 | 2.896 (3) | 169 |
C3—H3···O2Wvi | 0.93 | 2.56 | 3.445 (4) | 159 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (vi) x, −y+1/2, z+1/2. |
Experimental details
Crystal data |
Chemical formula | [Ni(C5H7O2)2(C5H5N)2]·2H2O |
Mr | 451.13 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 296 |
a, b, c (Å) | 16.362 (5), 14.476 (5), 9.543 (5) |
β (°) | 91.510 (5) |
V (Å3) | 2259.5 (16) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.89 |
Crystal size (mm) | 0.15 × 0.12 × 0.10 |
|
Data collection |
Diffractometer | Bruker APEXII CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 55078, 5587, 4298 |
Rint | 0.018 |
(sin θ/λ)max (Å−1) | 0.667 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.034, 0.103, 1.05 |
No. of reflections | 5587 |
No. of parameters | 269 |
No. of restraints | 6 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.22, −0.25 |
Selected bond lengths (Å) topNi1—O1 | 2.0427 (17) | Ni2—N2 | 2.126 (2) |
Ni1—O2 | 2.0407 (16) | Ni2—O3 | 2.0299 (16) |
Ni1—N1 | 2.1039 (19) | Ni2—O4 | 2.0297 (17) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O2W—H1W···O3 | 0.8400 | 2.1000 | 2.926 (3) | 166.00 |
O2W—H2W···O1W | 0.8600 | 2.4600 | 3.092 (4) | 131.00 |
O1W—H11W···O2 | 0.8300 | 2.4500 | 2.908 (3) | 116.00 |
O1W—H22W···O1i | 0.8400 | 2.0700 | 2.896 (3) | 169.00 |
Symmetry code: (i) −x+1, −y+1, −z+1. |
The crystal structure of the title compound Ni(acac)2(py)2.2H2O, where acac = acetylacetonate and py = pyridine, is composed of two crystallographically independent Ni complexes with similar geometry and with the Ni(II) atoms located on inversion centres as well as two water molecules located on general positions (Fig. 1). Both Ni(II) atoms have octahedral coordination geometry with the basal plane defined by the four oxygen atoms of the chelating acac (O1, O1i, O2, O2i) and (O3, O3ii, O4, O4ii) for Ni1 and Ni2 respectively, the axial positions are occupied by pyridine N atoms. Related structures have been reported previously in literature: the structure published by Elder (1968) is the anhydrate of the title compound, Zukerman-Schpector et al. (2007) published a methyl pyridine derivative, and the 3 and 4-cyanopyridine derivatives were also reported by Zukerman-Schpector and co-workers (2000). Other structures have been obtained with derivatives of acac: 1,3-diphenyl-1,3-propanedionato (Soldatov, et al., (2001)) and 4-pyridyltetrathiafulvalene (Wang, et al., (2006)). All the bond lengths and angles are in the normal range (Elder et al., 1968; Zukerman-Schpector et al., 2000; Wang et al., 2006). The two independent units are linked to each other by weak O—H···O hydrogen bonds (see Table 2 for geometric details) which form a one-dimensional chain, running parallel to a as shown in Fig. 2. Another feature in this crystal structure is the presence of C—H···π interactions, which further stabilize the crystal packing. These C—H···π interactions are present between the C—H group of acac and an adjacent pyridine rings with a H···π distance of 3.183 Å (Fig. 2).