In the title salt, C
10H
11N
32+·2C
8H
5O
4−, doubly protonated 4,4′-dipyridylamine (dpa) cations participate in N—H
O hydrogen bonding with two hydrogen phthalate anions to form a neutral unit. Both anions contain an intramolecular O—H
O hydrogen bond. In the crystal structure, these units form two-dimensional layers through π–π stacking interactions with a centroid-to-centroid distance of 3.763 (3) Å. In turn, these layers aggregate in three dimensions by additional N—H
O hydrogen bonding. The assignment to the noncentrosymmetric space group
P1 is corroborated by chemically unreasonable aromatic ring bond distances and poor
K scale factor distributions for a disordered model in the centrosymmetric
P space group.
Supporting information
CCDC reference: 709386
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.008 Å
- R factor = 0.060
- wR factor = 0.170
- Data-to-parameter ratio = 7.2
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT410_ALERT_2_A Short Intra H...H Contact H2 .. H9 .. 1.76 Ang.
| Author Response: calculated positions within dpa moieties, across
pyridyl rings
|
PLAT772_ALERT_2_A Suspect O-H Bond in CIF: O2 -- H3A .. 1.37 Ang.
| Author Response: O...H...O bridge in acid moiety
|
PLAT772_ALERT_2_A Suspect O-H Bond in CIF: O7 -- H7A .. 1.37 Ang.
| Author Response: O...H...O bridge in acid moiety
|
Alert level B
PLAT111_ALERT_2_B ADDSYM Detects (Pseudo) Centre of Symmetry ..... 97 PerFi
PLAT113_ALERT_2_B ADDSYM Suggests Possible Pseudo/New Space-group. P-1
| Author Response: assignment to P1 discussed in manuscript
|
Alert level C
PLAT089_ALERT_3_C Poor Data / Parameter Ratio (Zmax .LT. 18) ..... 7.20
PLAT230_ALERT_2_C Hirshfeld Test Diff for N2 -- C6 .. 6.05 su
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.27
PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 8
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C21 - C27 ... 1.55 Ang.
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C26 - C28 ... 1.53 Ang.
PLAT432_ALERT_2_C Short Inter X...Y Contact O5 .. C6 .. 2.99 Ang.
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT063_ALERT_4_C Crystal Probably too Large for Beam Size ....... 0.75 mm
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1
C10 H11 N3
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2
C8 H5 O4
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3
C8 H5 O4
Alert level G
REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is
correct. If it is not, please give the correct count in the
_publ_section_exptl_refinement section of the submitted CIF.
From the CIF: _diffrn_reflns_theta_max 28.04
From the CIF: _reflns_number_total 2513
Count of symmetry unique reflns 2746
Completeness (_total/calc) 91.51%
TEST3: Check Friedels for noncentro structure
Estimate of Friedel pairs measured 0
Fraction of Friedel pairs measured 0.000
Are heavy atom types Z>Si present no
PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 6
PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K
PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K
3 ALERT level A = In general: serious problem
2 ALERT level B = Potentially serious problem
12 ALERT level C = Check and explain
4 ALERT level G = General alerts; check
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
10 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
5 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Phthalic acid was obtained commercially. 4,4'-dipyridylamine was prepared
via a published procedure (Zapf et al., 1998). A mixture
of
phthalic acid (96 mg, 0.58 mmol) and 4,4'-dipyridylamine (50 mg, 0.29 mmol)
was placed in 10.0 g water (550 mmol) in a 25 ml beaker. The solution was then
heated to boiling. Large colourless blocks of the title compound were isolated
after the solution was cooled to 298K and allowed to stand undisturbed for 3 d.
All H atoms bound to C atoms were placed in calculated positions, with C—H =
0.95 Å and refined in riding mode with Uiso = 1.2Ueq(C).
All H atoms bound to O and N atoms were found via Fourier difference
map and refined with Uiso = 1.2Ueq(N) or 1.2Ueq(O).
The pyridinium N—H bonds were restrained with N—H = 0.89 (2) Å and the
amine N—H bond was restrained with N—H = 0.85 (2) Å. The O—H distances
were allowed to refine. In the absence of significant anomalous
dispersion effects Friedel pairs were merged prior to the final refinement.
Data collection: SMART (Bruker, 2001); cell refinement: SAINT-Plus (Bruker, 2003); data reduction: SAINT-Plus (Bruker, 2003); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: CrystalMaker (Palmer, 2005); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
4,4'-Iminodipyridinium bis(hydrogen phthalate)
top
Crystal data top
C10H11N32+·2C8H5O4− | Z = 1 |
Mr = 503.46 | F(000) = 262 |
Triclinic, P1 | Dx = 1.474 Mg m−3 |
Hall symbol: P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.858 (2) Å | Cell parameters from 6282 reflections |
b = 8.101 (2) Å | θ = 2.1–28.0° |
c = 9.601 (3) Å | µ = 0.11 mm−1 |
α = 85.673 (5)° | T = 293 K |
β = 85.186 (5)° | Block, colourless |
γ = 68.834 (4)° | 0.75 × 0.60 × 0.30 mm |
V = 567.3 (3) Å3 | |
Data collection top
Bruker SMART 1K diffractometer | 2513 independent reflections |
Radiation source: fine-focus sealed tube | 2269 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.014 |
ω scans | θmax = 28.0°, θmin = 2.1° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −10→10 |
Tmin = 0.831, Tmax = 0.967 | k = −10→10 |
6282 measured reflections | l = −12→12 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.060 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.170 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | w = 1/[σ2(Fo2) + (0.0871P)2 + 0.2863P] where P = (Fo2 + 2Fc2)/3 |
2513 reflections | (Δ/σ)max < 0.001 |
349 parameters | Δρmax = 0.56 e Å−3 |
6 restraints | Δρmin = −0.32 e Å−3 |
Crystal data top
C10H11N32+·2C8H5O4− | γ = 68.834 (4)° |
Mr = 503.46 | V = 567.3 (3) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.858 (2) Å | Mo Kα radiation |
b = 8.101 (2) Å | µ = 0.11 mm−1 |
c = 9.601 (3) Å | T = 293 K |
α = 85.673 (5)° | 0.75 × 0.60 × 0.30 mm |
β = 85.186 (5)° | |
Data collection top
Bruker SMART 1K diffractometer | 2513 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2269 reflections with I > 2σ(I) |
Tmin = 0.831, Tmax = 0.967 | Rint = 0.014 |
6282 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.060 | 6 restraints |
wR(F2) = 0.170 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.06 | Δρmax = 0.56 e Å−3 |
2513 reflections | Δρmin = −0.32 e Å−3 |
349 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | −0.9711 (7) | 0.8965 (7) | 1.1049 (4) | 0.0832 (14) | |
O2 | −0.7469 (5) | 0.7612 (6) | 1.2383 (5) | 0.0712 (12) | |
O3 | −0.6750 (5) | 0.5656 (7) | 1.4411 (6) | 0.0824 (14) | |
H3A | −0.691 (11) | 0.624 (10) | 1.337 (9) | 0.099* | |
O4 | −0.8021 (6) | 0.3983 (6) | 1.5649 (5) | 0.0780 (13) | |
O5 | 0.3019 (7) | 1.2225 (8) | 0.2453 (5) | 0.0926 (17) | |
O6 | 0.0684 (5) | 1.3566 (6) | 0.1220 (5) | 0.0709 (12) | |
H7A | 0.043 (9) | 1.430 (9) | 0.028 (8) | 0.085* | |
O7 | −0.0087 (5) | 1.5473 (6) | −0.0843 (5) | 0.0802 (13) | |
O8 | 0.1036 (5) | 1.7269 (5) | −0.2062 (4) | 0.0654 (10) | |
N1 | −0.6896 (8) | 0.9599 (7) | 0.9469 (5) | 0.0655 (14) | |
H1N | −0.780 (6) | 0.944 (9) | 0.995 (6) | 0.079* | |
N2 | −0.0792 (9) | 1.2304 (7) | 0.3688 (5) | 0.0760 (18) | |
H2N | −0.047 (10) | 1.285 (8) | 0.299 (5) | 0.091* | |
N3 | −0.2299 (5) | 0.9798 (5) | 0.7185 (4) | 0.0495 (8) | |
H3N | −0.121 (5) | 0.902 (6) | 0.751 (6) | 0.059* | |
C1 | −0.7118 (7) | 1.0624 (9) | 0.8305 (7) | 0.0714 (17) | |
H1 | −0.8289 | 1.1282 | 0.8031 | 0.086* | |
C2 | −0.5601 (8) | 1.0716 (7) | 0.7497 (5) | 0.0605 (14) | |
H2 | −0.5747 | 1.1424 | 0.6674 | 0.073* | |
C3 | −0.3924 (6) | 0.9770 (7) | 0.7916 (5) | 0.0533 (12) | |
C4 | −0.3767 (8) | 0.8754 (8) | 0.9177 (6) | 0.0689 (16) | |
H4 | −0.2625 | 0.8122 | 0.9517 | 0.083* | |
C5 | −0.5320 (10) | 0.8709 (8) | 0.9894 (6) | 0.0713 (16) | |
H5 | −0.5226 | 0.8009 | 1.0718 | 0.086* | |
C6 | 0.0413 (8) | 1.1117 (8) | 0.4402 (7) | 0.0668 (15) | |
H6 | 0.1643 | 1.0811 | 0.4115 | 0.080* | |
C7 | −0.0060 (7) | 1.0321 (7) | 0.5539 (6) | 0.0607 (13) | |
H7 | 0.0843 | 0.9471 | 0.6042 | 0.073* | |
C8 | −0.1878 (8) | 1.0729 (6) | 0.5996 (5) | 0.0517 (11) | |
C9 | −0.3186 (7) | 1.1998 (8) | 0.5237 (6) | 0.0618 (14) | |
H9 | −0.4424 | 1.2313 | 0.5500 | 0.074* | |
C10 | −0.2574 (9) | 1.2797 (8) | 0.4051 (6) | 0.0697 (15) | |
H10 | −0.3414 | 1.3673 | 0.3517 | 0.084* | |
C11 | −1.0440 (6) | 0.7547 (6) | 1.3134 (4) | 0.0392 (9) | |
C12 | −1.2276 (6) | 0.8392 (7) | 1.2857 (5) | 0.0508 (11) | |
H12 | −1.2573 | 0.9150 | 1.2065 | 0.061* | |
C13 | −1.3670 (7) | 0.8140 (8) | 1.3720 (7) | 0.0642 (14) | |
H13 | −1.4881 | 0.8714 | 1.3502 | 0.077* | |
C14 | −1.3265 (7) | 0.7059 (8) | 1.4877 (6) | 0.0639 (15) | |
H14 | −1.4203 | 0.6922 | 1.5477 | 0.077* | |
C15 | −1.1462 (7) | 0.6149 (7) | 1.5178 (5) | 0.0547 (12) | |
H15 | −1.1207 | 0.5380 | 1.5967 | 0.066* | |
C16 | −1.0025 (6) | 0.6360 (5) | 1.4328 (4) | 0.0384 (9) | |
C17 | −0.9122 (7) | 0.8067 (6) | 1.2125 (5) | 0.0493 (11) | |
C18 | −0.8166 (7) | 0.5225 (7) | 1.4825 (6) | 0.0586 (12) | |
C21 | 0.3638 (5) | 1.3702 (5) | 0.0345 (4) | 0.0391 (9) | |
C22 | 0.5473 (7) | 1.2878 (7) | 0.0605 (5) | 0.0535 (12) | |
H22 | 0.5797 | 1.2125 | 0.1396 | 0.064* | |
C23 | 0.6836 (7) | 1.3158 (8) | −0.0294 (7) | 0.0640 (14) | |
H23 | 0.8060 | 1.2567 | −0.0120 | 0.077* | |
C24 | 0.6362 (7) | 1.4317 (9) | −0.1449 (6) | 0.0632 (14) | |
H24 | 0.7259 | 1.4535 | −0.2048 | 0.076* | |
C25 | 0.4570 (7) | 1.5131 (7) | −0.1694 (5) | 0.0539 (12) | |
H25 | 0.4265 | 1.5892 | −0.2483 | 0.065* | |
C26 | 0.3158 (6) | 1.4886 (6) | −0.0825 (4) | 0.0420 (9) | |
C27 | 0.2367 (8) | 1.3142 (7) | 0.1443 (5) | 0.0548 (12) | |
C28 | 0.1238 (6) | 1.5967 (6) | −0.1279 (5) | 0.0488 (10) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.080 (3) | 0.110 (4) | 0.055 (2) | −0.037 (3) | 0.000 (2) | 0.034 (2) |
O2 | 0.044 (2) | 0.090 (3) | 0.076 (3) | −0.0278 (18) | 0.0088 (17) | 0.023 (2) |
O3 | 0.0427 (19) | 0.099 (3) | 0.106 (3) | −0.030 (2) | −0.022 (2) | 0.032 (3) |
O4 | 0.081 (3) | 0.072 (3) | 0.072 (3) | −0.020 (2) | −0.018 (2) | 0.032 (2) |
O5 | 0.083 (3) | 0.134 (5) | 0.058 (2) | −0.047 (3) | 0.000 (2) | 0.048 (3) |
O6 | 0.046 (2) | 0.083 (3) | 0.079 (3) | −0.0271 (18) | 0.0162 (18) | 0.022 (2) |
O7 | 0.0424 (18) | 0.088 (3) | 0.108 (3) | −0.0269 (18) | −0.0145 (19) | 0.040 (2) |
O8 | 0.054 (2) | 0.064 (2) | 0.071 (2) | −0.0164 (17) | −0.0107 (17) | 0.0269 (18) |
N1 | 0.071 (3) | 0.081 (3) | 0.061 (3) | −0.051 (3) | 0.032 (2) | −0.020 (2) |
N2 | 0.125 (5) | 0.062 (3) | 0.051 (2) | −0.054 (3) | 0.037 (3) | 0.000 (2) |
N3 | 0.0458 (17) | 0.056 (2) | 0.0426 (18) | −0.0175 (15) | 0.0023 (14) | 0.0135 (15) |
C1 | 0.040 (3) | 0.084 (4) | 0.082 (4) | −0.008 (3) | −0.013 (2) | −0.014 (3) |
C2 | 0.084 (4) | 0.056 (3) | 0.039 (2) | −0.024 (3) | −0.011 (2) | 0.018 (2) |
C3 | 0.045 (2) | 0.070 (3) | 0.050 (3) | −0.028 (2) | 0.0135 (19) | −0.015 (2) |
C4 | 0.063 (3) | 0.066 (3) | 0.051 (3) | 0.006 (2) | −0.005 (2) | 0.010 (2) |
C5 | 0.098 (5) | 0.059 (3) | 0.049 (3) | −0.025 (3) | 0.005 (3) | 0.018 (2) |
C6 | 0.054 (3) | 0.066 (3) | 0.083 (4) | −0.028 (2) | 0.018 (3) | −0.015 (3) |
C7 | 0.049 (3) | 0.067 (3) | 0.057 (3) | −0.009 (2) | −0.007 (2) | −0.003 (2) |
C8 | 0.076 (3) | 0.043 (2) | 0.038 (2) | −0.027 (2) | 0.011 (2) | 0.0008 (17) |
C9 | 0.044 (2) | 0.078 (4) | 0.063 (3) | −0.021 (2) | 0.007 (2) | −0.014 (3) |
C10 | 0.082 (4) | 0.058 (3) | 0.058 (3) | −0.012 (3) | −0.018 (3) | 0.014 (2) |
C11 | 0.037 (2) | 0.048 (2) | 0.0359 (19) | −0.0200 (17) | −0.0010 (16) | 0.0031 (16) |
C12 | 0.040 (2) | 0.059 (3) | 0.051 (3) | −0.016 (2) | −0.0064 (19) | 0.009 (2) |
C13 | 0.036 (2) | 0.077 (4) | 0.077 (4) | −0.018 (2) | −0.004 (2) | 0.002 (3) |
C14 | 0.047 (3) | 0.078 (4) | 0.076 (4) | −0.037 (3) | 0.015 (2) | −0.001 (3) |
C15 | 0.060 (3) | 0.065 (3) | 0.048 (3) | −0.036 (2) | 0.006 (2) | 0.009 (2) |
C16 | 0.041 (2) | 0.041 (2) | 0.038 (2) | −0.0194 (17) | −0.0055 (16) | 0.0053 (16) |
C17 | 0.054 (3) | 0.055 (3) | 0.041 (2) | −0.025 (2) | 0.0030 (19) | 0.0045 (19) |
C18 | 0.054 (3) | 0.057 (3) | 0.064 (3) | −0.019 (2) | −0.012 (2) | 0.009 (2) |
C21 | 0.038 (2) | 0.040 (2) | 0.039 (2) | −0.0150 (16) | −0.0002 (16) | 0.0020 (16) |
C22 | 0.051 (3) | 0.058 (3) | 0.052 (3) | −0.020 (2) | −0.016 (2) | 0.014 (2) |
C23 | 0.034 (2) | 0.077 (3) | 0.083 (4) | −0.024 (2) | −0.004 (2) | 0.002 (3) |
C24 | 0.047 (3) | 0.088 (4) | 0.061 (3) | −0.037 (3) | 0.015 (2) | 0.004 (3) |
C25 | 0.050 (3) | 0.065 (3) | 0.049 (3) | −0.027 (2) | −0.001 (2) | 0.014 (2) |
C26 | 0.0350 (19) | 0.052 (2) | 0.041 (2) | −0.0199 (17) | 0.0055 (16) | −0.0010 (18) |
C27 | 0.062 (3) | 0.058 (3) | 0.045 (2) | −0.026 (2) | 0.015 (2) | 0.004 (2) |
C28 | 0.042 (2) | 0.051 (2) | 0.051 (2) | −0.0165 (18) | −0.0068 (18) | 0.013 (2) |
Geometric parameters (Å, º) top
O1—C17 | 1.238 (6) | C7—C8 | 1.385 (7) |
O2—C17 | 1.257 (6) | C7—H7 | 0.9300 |
O2—H3A | 1.37 (9) | C8—C9 | 1.376 (8) |
O3—C18 | 1.305 (7) | C9—C10 | 1.403 (8) |
O3—H3A | 1.07 (9) | C9—H9 | 0.9300 |
O4—C18 | 1.210 (6) | C10—H10 | 0.9300 |
O5—C27 | 1.206 (7) | C11—C12 | 1.395 (6) |
O6—C27 | 1.273 (7) | C11—C16 | 1.420 (6) |
O6—H7A | 1.03 (8) | C11—C17 | 1.507 (6) |
O7—C28 | 1.273 (6) | C12—C13 | 1.383 (7) |
O7—H7A | 1.37 (8) | C12—H12 | 0.9300 |
O8—C28 | 1.218 (6) | C13—C14 | 1.347 (8) |
N1—C5 | 1.271 (9) | C13—H13 | 0.9300 |
N1—C1 | 1.325 (9) | C14—C15 | 1.385 (8) |
N1—H1N | 0.86 (6) | C14—H14 | 0.9300 |
N2—C6 | 1.282 (9) | C15—C16 | 1.391 (6) |
N2—C10 | 1.333 (9) | C15—H15 | 0.9300 |
N2—H2N | 0.85 (6) | C16—C18 | 1.513 (7) |
N3—C8 | 1.403 (5) | C21—C22 | 1.388 (6) |
N3—C3 | 1.411 (5) | C21—C26 | 1.404 (6) |
N3—H3N | 0.92 (5) | C21—C27 | 1.547 (6) |
C1—C2 | 1.389 (9) | C22—C23 | 1.391 (7) |
C1—H1 | 0.9300 | C22—H22 | 0.9300 |
C2—C3 | 1.342 (8) | C23—C24 | 1.382 (9) |
C2—H2 | 0.9300 | C23—H23 | 0.9300 |
C3—C4 | 1.400 (7) | C24—C25 | 1.355 (8) |
C4—C5 | 1.361 (9) | C24—H24 | 0.9300 |
C4—H4 | 0.9300 | C25—C26 | 1.394 (6) |
C5—H5 | 0.9300 | C25—H25 | 0.9300 |
C6—C7 | 1.321 (9) | C26—C28 | 1.527 (6) |
C6—H6 | 0.9300 | | |
| | | |
C17—O2—H3A | 114 (4) | C13—C12—C11 | 122.2 (4) |
C18—O3—H3A | 110 (4) | C13—C12—H12 | 118.9 |
C27—O6—H7A | 109 (4) | C11—C12—H12 | 118.9 |
C28—O7—H7A | 109 (3) | C14—C13—C12 | 119.7 (5) |
C5—N1—C1 | 121.9 (5) | C14—C13—H13 | 120.2 |
C5—N1—H1N | 116 (5) | C12—C13—H13 | 120.2 |
C1—N1—H1N | 122 (5) | C13—C14—C15 | 120.4 (5) |
C6—N2—C10 | 122.0 (5) | C13—C14—H14 | 119.8 |
C6—N2—H2N | 120 (5) | C15—C14—H14 | 119.8 |
C10—N2—H2N | 118 (5) | C14—C15—C16 | 121.4 (5) |
C8—N3—C3 | 135.3 (4) | C14—C15—H15 | 119.3 |
C8—N3—H3N | 108 (4) | C16—C15—H15 | 119.3 |
C3—N3—H3N | 117 (4) | C15—C16—C11 | 118.6 (4) |
N1—C1—C2 | 119.9 (5) | C15—C16—C18 | 113.1 (4) |
N1—C1—H1 | 120.0 | C11—C16—C18 | 128.3 (4) |
C2—C1—H1 | 120.0 | O1—C17—O2 | 121.0 (5) |
C3—C2—C1 | 119.2 (5) | O1—C17—C11 | 118.5 (5) |
C3—C2—H2 | 120.4 | O2—C17—C11 | 120.5 (4) |
C1—C2—H2 | 120.4 | O4—C18—O3 | 120.8 (5) |
C2—C3—C4 | 118.6 (5) | O4—C18—C16 | 119.8 (5) |
C2—C3—N3 | 123.6 (5) | O3—C18—C16 | 119.3 (5) |
C4—C3—N3 | 117.8 (5) | C22—C21—C26 | 118.9 (4) |
C5—C4—C3 | 118.6 (5) | C22—C21—C27 | 112.6 (4) |
C5—C4—H4 | 120.7 | C26—C21—C27 | 128.5 (4) |
C3—C4—H4 | 120.7 | C21—C22—C23 | 121.3 (4) |
N1—C5—C4 | 121.8 (5) | C21—C22—H22 | 119.4 |
N1—C5—H5 | 119.1 | C23—C22—H22 | 119.4 |
C4—C5—H5 | 119.1 | C24—C23—C22 | 119.6 (5) |
N2—C6—C7 | 121.3 (5) | C24—C23—H23 | 120.2 |
N2—C6—H6 | 119.4 | C22—C23—H23 | 120.2 |
C7—C6—H6 | 119.4 | C25—C24—C23 | 118.9 (4) |
C6—C7—C8 | 121.1 (5) | C25—C24—H24 | 120.5 |
C6—C7—H7 | 119.4 | C23—C24—H24 | 120.5 |
C8—C7—H7 | 119.4 | C24—C25—C26 | 123.4 (4) |
C9—C8—C7 | 118.2 (4) | C24—C25—H25 | 118.3 |
C9—C8—N3 | 123.2 (5) | C26—C25—H25 | 118.3 |
C7—C8—N3 | 118.5 (5) | C25—C26—C21 | 117.8 (4) |
C8—C9—C10 | 117.3 (5) | C25—C26—C28 | 114.7 (4) |
C8—C9—H9 | 121.4 | C21—C26—C28 | 127.5 (3) |
C10—C9—H9 | 121.4 | O5—C27—O6 | 121.4 (5) |
N2—C10—C9 | 120.1 (5) | O5—C27—C21 | 119.0 (5) |
N2—C10—H10 | 119.9 | O6—C27—C21 | 119.4 (4) |
C9—C10—H10 | 119.9 | O8—C28—O7 | 122.3 (5) |
C12—C11—C16 | 117.7 (4) | O8—C28—C26 | 118.4 (4) |
C12—C11—C17 | 114.6 (4) | O7—C28—C26 | 119.3 (4) |
C16—C11—C17 | 127.7 (4) | | |
| | | |
C5—N1—C1—C2 | 1.5 (9) | C12—C11—C16—C18 | 177.2 (5) |
N1—C1—C2—C3 | −0.6 (9) | C17—C11—C16—C18 | −4.8 (8) |
C1—C2—C3—C4 | −1.4 (8) | C12—C11—C17—O1 | −10.2 (7) |
C1—C2—C3—N3 | −178.7 (5) | C16—C11—C17—O1 | 171.7 (5) |
C8—N3—C3—C2 | 3.8 (8) | C12—C11—C17—O2 | 169.0 (5) |
C8—N3—C3—C4 | −173.6 (5) | C16—C11—C17—O2 | −9.0 (8) |
C2—C3—C4—C5 | 2.7 (9) | C15—C16—C18—O4 | 17.3 (7) |
N3—C3—C4—C5 | −179.9 (5) | C11—C16—C18—O4 | −162.1 (5) |
C1—N1—C5—C4 | −0.2 (10) | C15—C16—C18—O3 | −159.4 (5) |
C3—C4—C5—N1 | −1.9 (10) | C11—C16—C18—O3 | 21.3 (8) |
C10—N2—C6—C7 | 0.1 (10) | C26—C21—C22—C23 | −2.2 (8) |
N2—C6—C7—C8 | 0.5 (9) | C27—C21—C22—C23 | 177.6 (5) |
C6—C7—C8—C9 | −0.4 (8) | C21—C22—C23—C24 | 1.9 (9) |
C6—C7—C8—N3 | 178.0 (5) | C22—C23—C24—C25 | −1.3 (10) |
C3—N3—C8—C9 | 1.6 (8) | C23—C24—C25—C26 | 1.2 (10) |
C3—N3—C8—C7 | −176.7 (5) | C24—C25—C26—C21 | −1.4 (8) |
C7—C8—C9—C10 | −0.3 (8) | C24—C25—C26—C28 | 178.6 (5) |
N3—C8—C9—C10 | −178.6 (5) | C22—C21—C26—C25 | 1.9 (7) |
C6—N2—C10—C9 | −0.8 (9) | C27—C21—C26—C25 | −177.9 (5) |
C8—C9—C10—N2 | 0.9 (9) | C22—C21—C26—C28 | −178.1 (5) |
C16—C11—C12—C13 | 1.7 (7) | C27—C21—C26—C28 | 2.1 (8) |
C17—C11—C12—C13 | −176.5 (5) | C22—C21—C27—O5 | 6.8 (7) |
C11—C12—C13—C14 | 0.6 (9) | C26—C21—C27—O5 | −173.4 (6) |
C12—C13—C14—C15 | −2.4 (9) | C22—C21—C27—O6 | −168.9 (5) |
C13—C14—C15—C16 | 1.9 (9) | C26—C21—C27—O6 | 10.9 (8) |
C14—C15—C16—C11 | 0.4 (7) | C25—C26—C28—O8 | −20.4 (7) |
C14—C15—C16—C18 | −179.0 (5) | C21—C26—C28—O8 | 159.6 (5) |
C12—C11—C16—C15 | −2.2 (6) | C25—C26—C28—O7 | 158.8 (5) |
C17—C11—C16—C15 | 175.9 (5) | C21—C26—C28—O7 | −21.2 (8) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3A···O2 | 1.07 (9) | 1.37 (9) | 2.386 (6) | 155 (7) |
O6—H7A···O7 | 1.03 (8) | 1.37 (8) | 2.396 (6) | 172 (7) |
N1—H1N···O1 | 0.86 (6) | 1.90 (6) | 2.757 (6) | 177 (7) |
N2—H2N···O6 | 0.85 (6) | 2.00 (6) | 2.834 (5) | 167 (7) |
N3—H3N···O8i | 0.92 (5) | 1.88 (5) | 2.794 (5) | 172 (5) |
Symmetry code: (i) x, y−1, z+1. |
Experimental details
Crystal data |
Chemical formula | C10H11N32+·2C8H5O4− |
Mr | 503.46 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.858 (2), 8.101 (2), 9.601 (3) |
α, β, γ (°) | 85.673 (5), 85.186 (5), 68.834 (4) |
V (Å3) | 567.3 (3) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.75 × 0.60 × 0.30 |
|
Data collection |
Diffractometer | Bruker SMART 1K diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.831, 0.967 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6282, 2513, 2269 |
Rint | 0.014 |
(sin θ/λ)max (Å−1) | 0.661 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.060, 0.170, 1.06 |
No. of reflections | 2513 |
No. of parameters | 349 |
No. of restraints | 6 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.56, −0.32 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3A···O2 | 1.07 (9) | 1.37 (9) | 2.386 (6) | 155 (7) |
O6—H7A···O7 | 1.03 (8) | 1.37 (8) | 2.396 (6) | 172 (7) |
N1—H1N···O1 | 0.86 (6) | 1.90 (6) | 2.757 (6) | 177 (7) |
N2—H2N···O6 | 0.85 (6) | 2.00 (6) | 2.834 (5) | 167 (7) |
N3—H3N···O8i | 0.92 (5) | 1.88 (5) | 2.794 (5) | 172 (5) |
Symmetry code: (i) x, y−1, z+1. |
Co-crystals containing carboxylic acids and imines have exhibited enticing physical properties such as ferroelectricity (Horiuchi et al., 2005). Proton transfer between carboxylic acid and pyridine components has been observed in this class of co-crystals (Bhogala & Nangia, 2003). Charge-separated hydrogen bonding interactions serve to promote the stability of these co-crystals (Steiner, 2002). Because of locked conformation between its pyridyl rings in the solid-state, crystals of pure dpa are noncentrosymmetric (Cordes et al., 2006). Coordination polymers containing dpa have been observed to crystallize in noncentrosymmetric space groups (Montney et al., 2007). Thus we have sought to prepare chiral dpa-containing co-crystals.
The asymmetric unit of the title salt contains a doubly protonated [H2dpa]2+ dication, and two hydrogen phthalate ([phtH]-) ions (Fig. 1). The similar C—O bond lengths at the carboxylate termini marked by C17 and C28 indicate the presence of delocalized π bonds. On the other hand the C—O bond distances at C18 and C27 show greater C═O and C—O single bond character.
Each [H2dpa]2+ dication is linked to [Hpht]- anions on either side to form neutral [H2dpa][[Hpht]2 units, via N—H···O hydrogen bonding donation from both of its pyridinium termini to [Hpht]- carboxylate oxygen atoms. These neutral units then engage in π–π stacking between pyridyl and benzene rings (centroid-to-centroid distance = 3.763 Å) to construct pseudo two-dimensional layer patterns that lie parallel to the (101) crystal planes (Fig. 2).
The [H2dpa][[Hpht]2 layers are connected into the pseudo three-dimensional structure of the title compound via N—H···O hydrogen bonding mechanisms instilled by the central amine units of the [H2dpa]2+ dications (Fig. 3). Geometric parameters for the hydrogen bonding interactions are given in Table 1.
The assignment to the noncentrosymmetric space group P1 is corroborated by chemically unreasonable aromatic ring bond distances (1.0 and 1.7 Å) and poor K scale factors distributions for a disordered model in the centrosymmetric P1 space group.