In the title compound, C
30H
34N
2O
6, the complete molecule is generated by a crystallographic 2/
m symmetry operation. The 1-oxyl-3-pyrroline-3-carboxylate group lies on a mirror plane. The dihedral angle between the ring planes of the biphenyl fragment is constrained by symmetry to be zero, resulting in rather short intramolecular H

H contact distances of 2.02 Å. In the crystal, molecules are connected along the
a-axis direction by very weak intermolecular methyl–phenyl C—H

π interactions. The C—H bond is not directed to the center of the benzene ring, but mainly to one C atom [C—H

C(
x − 1,
y,
z): H

C = 2.91 Å and C—H

C = 143°].
Supporting information
CCDC reference: 744314
Key indicators
- Single-crystal X-ray study
- T = 169 K
- Mean
(C-C) = 0.002 Å
- R factor = 0.049
- wR factor = 0.126
- Data-to-parameter ratio = 19.8
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT480_ALERT_4_C Long H...A H-Bond Reported H11C .. C3 .. 2.91 Ang.
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
1 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
0 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
1 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
The title compound was prepared similar to the procedure described by Weber
et al. (2002). Single crystals were obtained by
recrystallization of
the compound from a mixture of toluene and n-hexane (3:1).
The H atoms were positioned geometrically and treated as riding:
Cmethyl—H=0.98 Å, Cplanar—H=0.95 Å,
Uiso(H)=1.2Ueq(Cnon-methyl) and
Uiso(H)=1.5Ueq(Cmethyl). The torsion angles about
the C—Cmethyl bonds were refined for the methyl groups.
Data collection: SMART (Siemens, 1995); cell refinement: SAINT (Siemens, 1995); data reduction: SAINT (Siemens, 1995); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
Biphenyl-4,4'-diyl bis(2,2,5,5-tetramethyl-1-oxyl-3-pyrroline-3-carboxylate)
top
Crystal data top
C30H34N2O6 | F(000) = 552 |
Mr = 518.59 | Dx = 1.270 Mg m−3 |
Monoclinic, C2/m | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 77 reflections |
a = 6.931 (2) Å | θ = 3–23° |
b = 9.461 (3) Å | µ = 0.09 mm−1 |
c = 20.805 (4) Å | T = 169 K |
β = 96.059 (14)° | Plate, yellow |
V = 1356.6 (6) Å3 | 0.44 × 0.30 × 0.10 mm |
Z = 2 | |
Data collection top
Siemens SMART 1K CCD diffractometer | 1552 reflections with I > 2σ(I) |
Radiation source: normal-focus sealed tube | Rint = 0.056 |
Graphite monochromator | θmax = 30.5°, θmin = 2.0° |
ω scans | h = −9→9 |
11267 measured reflections | k = −13→12 |
2074 independent reflections | l = −29→29 |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.049 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.126 | H-atom parameters constrained |
S = 1.03 | w = 1/[σ2(Fo2) + (0.06P)2 + 0.9P] where P = (Fo2 + 2Fc2)/3 |
2074 reflections | (Δ/σ)max = 0.001 |
105 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.21 e Å−3 |
Crystal data top
C30H34N2O6 | V = 1356.6 (6) Å3 |
Mr = 518.59 | Z = 2 |
Monoclinic, C2/m | Mo Kα radiation |
a = 6.931 (2) Å | µ = 0.09 mm−1 |
b = 9.461 (3) Å | T = 169 K |
c = 20.805 (4) Å | 0.44 × 0.30 × 0.10 mm |
β = 96.059 (14)° | |
Data collection top
Siemens SMART 1K CCD diffractometer | 1552 reflections with I > 2σ(I) |
11267 measured reflections | Rint = 0.056 |
2074 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.049 | 0 restraints |
wR(F2) = 0.126 | H-atom parameters constrained |
S = 1.03 | Δρmax = 0.39 e Å−3 |
2074 reflections | Δρmin = −0.21 e Å−3 |
105 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.58234 (19) | 0.0000 | 0.29187 (6) | 0.0310 (3) | |
O2 | 0.2989 (2) | 0.0000 | 0.33551 (6) | 0.0396 (4) | |
O3 | −0.0951 (2) | 0.0000 | 0.09831 (7) | 0.0323 (3) | |
N1 | 0.0672 (2) | 0.0000 | 0.13356 (7) | 0.0231 (3) | |
C1 | 0.9329 (3) | 0.0000 | 0.46943 (8) | 0.0231 (4) | |
C2 | 0.8678 (2) | 0.12604 (16) | 0.43958 (6) | 0.0317 (3) | |
H2A | 0.9076 | 0.2135 | 0.4592 | 0.038* | |
C3 | 0.7462 (2) | 0.12691 (16) | 0.38187 (7) | 0.0321 (3) | |
H3A | 0.7036 | 0.2137 | 0.3622 | 0.039* | |
C4 | 0.6887 (3) | 0.0000 | 0.35376 (8) | 0.0261 (4) | |
C5 | 0.3862 (3) | 0.0000 | 0.28870 (8) | 0.0211 (4) | |
C6 | 0.2971 (2) | 0.0000 | 0.22093 (8) | 0.0179 (3) | |
C7 | 0.3911 (3) | 0.0000 | 0.16826 (8) | 0.0190 (3) | |
H7A | 0.5285 | 0.0000 | 0.1696 | 0.023* | |
C8 | 0.2570 (3) | 0.0000 | 0.10658 (8) | 0.0205 (3) | |
C9 | 0.0794 (2) | 0.0000 | 0.20539 (8) | 0.0185 (3) | |
C10 | 0.2784 (2) | 0.13302 (16) | 0.06612 (7) | 0.0324 (3) | |
H10A | 0.1799 | 0.1325 | 0.0287 | 0.049* | |
H10B | 0.4079 | 0.1348 | 0.0512 | 0.049* | |
H10C | 0.2611 | 0.2169 | 0.0925 | 0.049* | |
C11 | −0.01778 (19) | 0.13337 (14) | 0.22809 (7) | 0.0261 (3) | |
H11A | −0.1535 | 0.1360 | 0.2093 | 0.039* | |
H11B | 0.0503 | 0.2170 | 0.2142 | 0.039* | |
H11C | −0.0125 | 0.1327 | 0.2753 | 0.039* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0170 (6) | 0.0590 (9) | 0.0159 (6) | 0.000 | −0.0032 (5) | 0.000 |
O2 | 0.0240 (7) | 0.0753 (12) | 0.0194 (6) | 0.000 | 0.0022 (5) | 0.000 |
O3 | 0.0215 (7) | 0.0429 (8) | 0.0295 (7) | 0.000 | −0.0116 (5) | 0.000 |
N1 | 0.0176 (7) | 0.0302 (8) | 0.0200 (7) | 0.000 | −0.0050 (5) | 0.000 |
C1 | 0.0194 (8) | 0.0309 (9) | 0.0182 (8) | 0.000 | −0.0018 (6) | 0.000 |
C2 | 0.0363 (8) | 0.0306 (7) | 0.0256 (7) | 0.0027 (6) | −0.0087 (6) | −0.0022 (5) |
C3 | 0.0340 (8) | 0.0360 (8) | 0.0244 (6) | 0.0067 (6) | −0.0066 (5) | 0.0026 (6) |
C4 | 0.0166 (8) | 0.0452 (11) | 0.0157 (8) | 0.000 | −0.0023 (6) | 0.000 |
C5 | 0.0183 (8) | 0.0246 (8) | 0.0195 (8) | 0.000 | −0.0017 (6) | 0.000 |
C6 | 0.0164 (7) | 0.0172 (7) | 0.0192 (8) | 0.000 | −0.0020 (6) | 0.000 |
C7 | 0.0179 (8) | 0.0188 (8) | 0.0193 (8) | 0.000 | −0.0021 (6) | 0.000 |
C8 | 0.0211 (8) | 0.0226 (8) | 0.0169 (7) | 0.000 | −0.0015 (6) | 0.000 |
C9 | 0.0159 (7) | 0.0193 (8) | 0.0199 (8) | 0.000 | −0.0006 (6) | 0.000 |
C10 | 0.0376 (8) | 0.0321 (7) | 0.0262 (7) | −0.0044 (6) | −0.0032 (6) | 0.0093 (6) |
C11 | 0.0200 (6) | 0.0234 (6) | 0.0346 (7) | 0.0024 (5) | 0.0012 (5) | −0.0035 (5) |
Geometric parameters (Å, º) top
O1—C5 | 1.354 (2) | C6—C7 | 1.332 (2) |
O1—C4 | 1.414 (2) | C6—C9 | 1.509 (2) |
O2—C5 | 1.199 (2) | C7—C8 | 1.503 (2) |
O3—N1 | 1.2766 (19) | C7—H7A | 0.9500 |
N1—C8 | 1.484 (2) | C8—C10i | 1.5299 (17) |
N1—C9 | 1.488 (2) | C8—C10 | 1.5299 (17) |
C1—C2i | 1.3970 (17) | C9—C11 | 1.5285 (16) |
C1—C2 | 1.3971 (17) | C9—C11i | 1.5285 (16) |
C1—C1ii | 1.495 (3) | C10—H10A | 0.9800 |
C2—C3 | 1.3922 (19) | C10—H10B | 0.9800 |
C2—H2A | 0.9500 | C10—H10C | 0.9800 |
C3—C4 | 1.3760 (17) | C11—H11A | 0.9800 |
C3—H3A | 0.9500 | C11—H11B | 0.9800 |
C4—C3i | 1.3761 (17) | C11—H11C | 0.9800 |
C5—C6 | 1.478 (2) | | |
| | | |
C5—O1—C4 | 117.92 (14) | N1—C8—C7 | 99.78 (13) |
O3—N1—C8 | 123.07 (14) | N1—C8—C10i | 110.45 (10) |
O3—N1—C9 | 122.02 (15) | C7—C8—C10i | 112.51 (9) |
C8—N1—C9 | 114.91 (13) | N1—C8—C10 | 110.45 (10) |
C2i—C1—C2 | 117.19 (16) | C7—C8—C10 | 112.51 (9) |
C2i—C1—C1ii | 121.40 (8) | C10i—C8—C10 | 110.69 (15) |
C2—C1—C1ii | 121.40 (8) | N1—C9—C6 | 99.50 (13) |
C3—C2—C1 | 121.74 (13) | N1—C9—C11 | 109.27 (9) |
C3—C2—H2A | 119.1 | C6—C9—C11 | 113.40 (9) |
C1—C2—H2A | 119.1 | N1—C9—C11i | 109.28 (9) |
C4—C3—C2 | 118.90 (13) | C6—C9—C11i | 113.40 (9) |
C4—C3—H3A | 120.6 | C11—C9—C11i | 111.28 (15) |
C2—C3—H3A | 120.6 | C8—C10—H10A | 109.5 |
C3—C4—C3i | 121.52 (17) | C8—C10—H10B | 109.5 |
C3—C4—O1 | 119.12 (8) | H10A—C10—H10B | 109.5 |
C3i—C4—O1 | 119.12 (8) | C8—C10—H10C | 109.5 |
O2—C5—O1 | 123.36 (16) | H10A—C10—H10C | 109.5 |
O2—C5—C6 | 125.39 (17) | H10B—C10—H10C | 109.5 |
O1—C5—C6 | 111.25 (14) | C9—C11—H11A | 109.5 |
C7—C6—C5 | 126.39 (16) | C9—C11—H11B | 109.5 |
C7—C6—C9 | 112.83 (14) | H11A—C11—H11B | 109.5 |
C5—C6—C9 | 120.78 (14) | C9—C11—H11C | 109.5 |
C6—C7—C8 | 112.99 (16) | H11A—C11—H11C | 109.5 |
C6—C7—H7A | 123.5 | H11B—C11—H11C | 109.5 |
C8—C7—H7A | 123.5 | | |
| | | |
C2i—C1—C2—C3 | −1.2 (3) | C9—N1—C8—C10i | 118.61 (10) |
C1ii—C1—C2—C3 | 178.55 (19) | O3—N1—C8—C10 | 61.39 (10) |
C1—C2—C3—C4 | 0.1 (2) | C9—N1—C8—C10 | −118.61 (10) |
C2—C3—C4—C3i | 1.0 (3) | C6—C7—C8—N1 | 0.0 |
C2—C3—C4—O1 | −173.34 (14) | C6—C7—C8—C10i | −117.08 (11) |
C5—O1—C4—C3 | −92.77 (15) | C6—C7—C8—C10 | 117.08 (11) |
C5—O1—C4—C3i | 92.77 (15) | O3—N1—C9—C6 | 180.0 |
C4—O1—C5—O2 | 0.0 | C8—N1—C9—C6 | 0.0 |
C4—O1—C5—C6 | 180.0 | O3—N1—C9—C11 | −60.99 (10) |
O2—C5—C6—C7 | 180.0 | C8—N1—C9—C11 | 119.01 (10) |
O1—C5—C6—C7 | 0.0 | O3—N1—C9—C11i | 60.99 (10) |
O2—C5—C6—C9 | 0.0 | C8—N1—C9—C11i | −119.01 (10) |
O1—C5—C6—C9 | 180.0 | C7—C6—C9—N1 | 0.0 |
C5—C6—C7—C8 | 180.0 | C5—C6—C9—N1 | 180.0 |
C9—C6—C7—C8 | 0.0 | C7—C6—C9—C11 | −115.91 (11) |
O3—N1—C8—C7 | 180.0 | C5—C6—C9—C11 | 64.09 (11) |
C9—N1—C8—C7 | 0.0 | C7—C6—C9—C11i | 115.92 (11) |
O3—N1—C8—C10i | −61.39 (10) | C5—C6—C9—C11i | −64.08 (11) |
Symmetry codes: (i) x, −y, z; (ii) −x+2, −y, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11C···C3iii | 0.98 | 2.91 | 3.745 (2) | 143 |
Symmetry code: (iii) x−1, y, z. |
Experimental details
Crystal data |
Chemical formula | C30H34N2O6 |
Mr | 518.59 |
Crystal system, space group | Monoclinic, C2/m |
Temperature (K) | 169 |
a, b, c (Å) | 6.931 (2), 9.461 (3), 20.805 (4) |
β (°) | 96.059 (14) |
V (Å3) | 1356.6 (6) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.44 × 0.30 × 0.10 |
|
Data collection |
Diffractometer | Siemens SMART 1K CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11267, 2074, 1552 |
Rint | 0.056 |
(sin θ/λ)max (Å−1) | 0.714 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.049, 0.126, 1.03 |
No. of reflections | 2074 |
No. of parameters | 105 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.39, −0.21 |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C11—H11C···C3i | 0.98 | 2.91 | 3.745 (2) | 143 |
Symmetry code: (i) x−1, y, z. |
The title compound was prepared as a reference compound for pulsed electron-electron double resonance measurements (Weber et al., 2002).
The molecular structure is shown in Fig. 1. The molecule has 2/m symmetry: atoms C1, C4, O1, C5, O2, C6, C7, C8, C9, N1 and O3 lie on a mirror plane. There is a twofold axis perpendicular to this mirror plane and passing through the center of the central C—C single bond. There also is an inversion center at the midpoint of the central C—C single bond. The two six-membered rings of the biphenyl group are coplanar by symmetry, resulting in rather short intramolecular H···H contact distances of 2.02 A. The 1-oxyl-3-pyrroline-3-carboxylate group is planar. Approximate planarity of this group also has been observed in a number of related crystal structures (Papoutsakis et al., 1999; Boeyens & Kruger, 1970; Bolte, 2006; Duskova et al., 2001; Godt et al., 2000; Wiley et al., 1989 and Wiley et al., 1991)
The crystal packing is shown in Fig 2. The molecules are connected along the a-direction by four symmetry-equivalent very weak intermolecular Cmethyl—H···π(phenyl) interactions (Table 1). The Cmethyl—H bond is not directed to the center of the phenyl ring, but mainly to one C atom. There are no other short intermolecular contacts.