Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810041310/lh5148sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810041310/lh5148Isup2.hkl |
CCDC reference: 799663
Key indicators
- Single-crystal X-ray study
- T = 298 K
- Mean (C-C) = 0.002 Å
- R factor = 0.045
- wR factor = 0.122
- Data-to-parameter ratio = 13.7
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 2 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 40 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 3 C3 H5 N2
Author Response: In order to make these component ions more compact, we have put the N1-N2/C10-C12 imidazole and water O7 molecules outside the unit cell. |
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 5 H2 O
Author Response: In order to make these component ions more compact, we have put the N1-N2/C10-C12 imidazole and water O7 molecules outside the unit cell. |
PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 32
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
All the reagents and solvents were used as obtained without further purification. Piperazine hexahydrate (0.2 mmol, 38.8 mg), imidazole (0.2 mmol, 13.6 mg) and benzene 1,3,5-tricarboxylic acid (0.1 mmol, 42.0 mg) were dissolved in 95% methanol (20 ml). The resulting colorless solution was kept in air for two weeks. Colorless blocks of the title compound suitable for single-crystal X-ray diffraction analysis were grown by slow evaporation of the solution at the bottom of the vessel.
H atoms bonded to C atoms were positioned geometrically with C–H = 0.93Å (aromatic) and 0.97 Å (methylene) and refined in a riding-model approximation [Uiso(H) = 1.2Ueq(C). H atoms bonded to N and O atoms were found in Fourier difference maps with N—H and were refined freely with Uiso(H)= 1.2Ueq(N) or 1.5Ueq(O).
Piperazine has been used in the manufacture of anthelmintic vermicide. In order to improve its pharmaceutical effect, piperazine has been made into tablets containing two or more components (Jacobs et al., 2009; Oswald et al., 2002; Wang & Jia, 2008). In this paper, we report a new four-component piperazine containing adduct and the crystal structure is presented herein.
The formula unit of the title compound is shown in Fig. 1. The asymmetric unit is composed of two imidazolium cations, half a piperazinium cation, one benzene 1,3,5-tricarboxylate trianion and one water molecule. During the crystallization, the carboxylic acid protons of benzene-1,3,5-tricarboxylic acid were transferred to the imidazole and piperazine nitrogen atoms, forming the 4:1:2:2 organic adduct (imidazolium: piperazinium: benzene 1,3,5-tricarboxylate: water). Delocalization of charges on the the imidazolium and the benzene-1,3,5-tricarboxylate ions are reflected in the bond distances of C15—N3, C15—N4, C9—O5 and C9—O6. The mean planes of the three carboxylate groups in the anion twisted away from the central benzene ring with dihedral angles of 13.5 (1)°, 14.5 (1)° and 16.9 (1)°.
In the crystal packing, the component ions are linked into a complex three-dimensional network by a combination of N—H···O, O—H···O and C—H···O hydrogen bonds (Table 1 and Figure 2). A PLATON (Spek, 2009) analysis shows that the crystal structure is further consolidated by a π···π interaction [Cg1···Cg1(1 - x, 1 - y, 2 - z) = 3.393 (2) Å, dihedral angle = 0°, Cg1 is the centroid defined by atoms N3/N4/C13—C15] and a C=O···π interaction (C9···Cg2 = 3.472 (2) Å, O5···Cg2 = 3.363 (2)Å and C9=O5···Cg2 = 84.4 (2)°, Cg2 is th centroid defined by atoms N1/N2/C10—C12). These types of weak interactions have previously been studied (Gao et al., 2009, Schottel et al., 2008).
For applications of multi-component piperazine compounds, see: Jacobs et al. (2009); Oswald et al. (2002); Wang & Jia (2008). For examples of compounds containing weak anion–π interactions, see: Schottel et al. (2008); Gao et al. (2009).
Data collection: SMART (Bruker, 2001); cell refinement: SAINT-Plus (Bruker, 2001); data reduction: SAINT-Plus (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009); software used to prepare material for publication: PLATON (Spek, 2009).
4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O | Z = 1 |
Mr = 814.78 | F(000) = 428 |
Triclinic, P1 | Dx = 1.474 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.1548 (4) Å | Cell parameters from 2102 reflections |
b = 9.9424 (5) Å | θ = 2.4–23.2° |
c = 13.3567 (7) Å | µ = 0.12 mm−1 |
α = 96.895 (1)° | T = 298 K |
β = 95.201 (1)° | Block, colorless |
γ = 101.439 (2)° | 0.20 × 0.13 × 0.10 mm |
V = 918.11 (8) Å3 |
Bruker SMART APEX CCD area-detector diffractometer | 3925 independent reflections |
Radiation source: fine focus sealed Siemens Mo tube | 2757 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
0.3° wide ω scans | θmax = 27.0°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −8→9 |
Tmin = 0.967, Tmax = 0.989 | k = −11→12 |
10341 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | w = 1/[σ2(Fo2) + (0.0631P)2 + 0.0369P] where P = (Fo2 + 2Fc2)/3 |
3925 reflections | (Δ/σ)max = 0.001 |
286 parameters | Δρmax = 0.31 e Å−3 |
0 restraints | Δρmin = −0.19 e Å−3 |
4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O | γ = 101.439 (2)° |
Mr = 814.78 | V = 918.11 (8) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.1548 (4) Å | Mo Kα radiation |
b = 9.9424 (5) Å | µ = 0.12 mm−1 |
c = 13.3567 (7) Å | T = 298 K |
α = 96.895 (1)° | 0.20 × 0.13 × 0.10 mm |
β = 95.201 (1)° |
Bruker SMART APEX CCD area-detector diffractometer | 3925 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 2757 reflections with I > 2σ(I) |
Tmin = 0.967, Tmax = 0.989 | Rint = 0.029 |
10341 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 0 restraints |
wR(F2) = 0.122 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.04 | Δρmax = 0.31 e Å−3 |
3925 reflections | Δρmin = −0.19 e Å−3 |
286 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.2128 (2) | −0.05764 (17) | 0.89657 (11) | 0.0263 (4) | |
C2 | 0.1004 (2) | −0.17749 (17) | 0.84080 (11) | 0.0263 (4) | |
H2 | 0.0409 | −0.2481 | 0.8743 | 0.032* | |
C3 | 0.0756 (2) | −0.19338 (17) | 0.73487 (11) | 0.0274 (4) | |
C4 | 0.1609 (2) | −0.08588 (18) | 0.68651 (12) | 0.0295 (4) | |
H4 | 0.1465 | −0.0964 | 0.6159 | 0.035* | |
C5 | 0.2676 (2) | 0.03761 (17) | 0.74101 (12) | 0.0267 (4) | |
C6 | 0.2947 (2) | 0.04896 (17) | 0.84640 (12) | 0.0274 (4) | |
H6 | 0.3694 | 0.1297 | 0.8838 | 0.033* | |
C7 | 0.2458 (2) | −0.04026 (18) | 1.01134 (12) | 0.0297 (4) | |
C8 | −0.0459 (2) | −0.32408 (19) | 0.67241 (12) | 0.0332 (4) | |
C9 | 0.3502 (2) | 0.15651 (19) | 0.68720 (13) | 0.0310 (4) | |
C10 | 0.2728 (3) | −0.0067 (2) | 1.32738 (13) | 0.0391 (5) | |
H10 | 0.3430 | 0.0790 | 1.3175 | 0.047* | |
C11 | 0.1114 (3) | −0.2190 (2) | 1.29964 (14) | 0.0432 (5) | |
H11 | 0.0505 | −0.3063 | 1.2661 | 0.052* | |
C12 | 0.1222 (3) | −0.1753 (2) | 1.39965 (13) | 0.0421 (5) | |
H12 | 0.0702 | −0.2261 | 1.4484 | 0.051* | |
C13 | 0.2479 (3) | 0.3752 (2) | 0.99158 (14) | 0.0401 (5) | |
H13 | 0.2379 | 0.2876 | 1.0111 | 0.048* | |
C14 | 0.2247 (3) | 0.4896 (2) | 1.04845 (14) | 0.0396 (5) | |
H14 | 0.1949 | 0.4961 | 1.1150 | 0.048* | |
C15 | 0.2920 (3) | 0.5449 (2) | 0.90127 (14) | 0.0400 (5) | |
H15 | 0.3176 | 0.5954 | 0.8480 | 0.048* | |
C16 | 0.3894 (3) | 0.4987 (2) | 0.58396 (13) | 0.0422 (5) | |
H16A | 0.3773 | 0.5318 | 0.6539 | 0.051* | |
H16B | 0.2710 | 0.4341 | 0.5557 | 0.051* | |
C17 | 0.5803 (3) | 0.3814 (2) | 0.47501 (14) | 0.0462 (5) | |
H17A | 0.4688 | 0.3126 | 0.4428 | 0.055* | |
H17B | 0.6910 | 0.3387 | 0.4747 | 0.055* | |
N1 | 0.2057 (2) | −0.11215 (17) | 1.25638 (11) | 0.0396 (4) | |
H1A | 0.217 (3) | −0.111 (2) | 1.1923 (16) | 0.048* | |
N2 | 0.2245 (2) | −0.04171 (17) | 1.41557 (11) | 0.0389 (4) | |
H2A | 0.265 (3) | 0.014 (2) | 1.4745 (16) | 0.047* | |
N3 | 0.2891 (2) | 0.41179 (16) | 0.89917 (12) | 0.0374 (4) | |
H3A | 0.320 (3) | 0.355 (2) | 0.8468 (14) | 0.045* | |
N4 | 0.2528 (2) | 0.59528 (17) | 0.99092 (11) | 0.0361 (4) | |
H4A | 0.240 (3) | 0.686 (2) | 1.0107 (14) | 0.043* | |
N5 | 0.5516 (2) | 0.42669 (17) | 0.58090 (11) | 0.0388 (4) | |
H5A | 0.667 (3) | 0.486 (2) | 0.6204 (14) | 0.047* | |
H5B | 0.520 (3) | 0.350 (2) | 0.6120 (15) | 0.047* | |
O1 | 0.3047 (2) | 0.07841 (13) | 1.05718 (9) | 0.0488 (4) | |
O2 | 0.21058 (18) | −0.14867 (12) | 1.05409 (8) | 0.0379 (3) | |
O3 | −0.15144 (18) | −0.40803 (13) | 0.71833 (9) | 0.0450 (4) | |
O4 | −0.0363 (2) | −0.34118 (16) | 0.58017 (9) | 0.0617 (5) | |
O5 | 0.3573 (2) | 0.13542 (13) | 0.59351 (9) | 0.0436 (3) | |
O6 | 0.41142 (19) | 0.27435 (12) | 0.73950 (9) | 0.0415 (3) | |
O7 | 0.4407 (2) | 0.26393 (16) | 1.22724 (10) | 0.0498 (4) | |
H7A | 0.407 (3) | 0.201 (3) | 1.1749 (19) | 0.075* | |
H7B | 0.342 (3) | 0.306 (3) | 1.2364 (18) | 0.075* |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0326 (9) | 0.0259 (9) | 0.0207 (8) | 0.0069 (7) | 0.0028 (6) | 0.0045 (6) |
C2 | 0.0329 (9) | 0.0236 (9) | 0.0223 (8) | 0.0025 (7) | 0.0046 (6) | 0.0073 (6) |
C3 | 0.0293 (8) | 0.0277 (10) | 0.0243 (8) | 0.0042 (7) | 0.0023 (6) | 0.0038 (7) |
C4 | 0.0368 (9) | 0.0330 (10) | 0.0186 (7) | 0.0064 (8) | 0.0040 (6) | 0.0047 (7) |
C5 | 0.0301 (9) | 0.0256 (9) | 0.0265 (8) | 0.0071 (7) | 0.0068 (6) | 0.0069 (7) |
C6 | 0.0330 (9) | 0.0218 (9) | 0.0261 (8) | 0.0036 (7) | 0.0025 (7) | 0.0027 (7) |
C7 | 0.0397 (10) | 0.0282 (10) | 0.0213 (8) | 0.0080 (8) | 0.0034 (7) | 0.0026 (7) |
C8 | 0.0360 (9) | 0.0336 (11) | 0.0256 (8) | 0.0009 (8) | −0.0006 (7) | 0.0013 (7) |
C9 | 0.0357 (9) | 0.0301 (10) | 0.0307 (9) | 0.0095 (8) | 0.0088 (7) | 0.0103 (7) |
C10 | 0.0498 (11) | 0.0398 (12) | 0.0308 (9) | 0.0124 (9) | 0.0099 (8) | 0.0090 (8) |
C11 | 0.0501 (11) | 0.0425 (12) | 0.0332 (10) | 0.0025 (9) | 0.0019 (8) | 0.0040 (9) |
C12 | 0.0477 (11) | 0.0478 (13) | 0.0322 (10) | 0.0064 (10) | 0.0094 (8) | 0.0140 (9) |
C13 | 0.0473 (11) | 0.0327 (11) | 0.0427 (10) | 0.0080 (9) | 0.0089 (8) | 0.0128 (9) |
C14 | 0.0465 (11) | 0.0394 (12) | 0.0352 (10) | 0.0105 (9) | 0.0087 (8) | 0.0086 (8) |
C15 | 0.0500 (11) | 0.0342 (12) | 0.0376 (10) | 0.0081 (9) | 0.0112 (8) | 0.0097 (8) |
C16 | 0.0441 (11) | 0.0506 (13) | 0.0269 (9) | −0.0014 (9) | 0.0040 (8) | 0.0040 (8) |
C17 | 0.0566 (12) | 0.0361 (12) | 0.0432 (11) | 0.0085 (10) | −0.0001 (9) | 0.0013 (9) |
N1 | 0.0508 (10) | 0.0500 (11) | 0.0216 (7) | 0.0155 (8) | 0.0074 (7) | 0.0090 (7) |
N2 | 0.0487 (9) | 0.0454 (11) | 0.0233 (7) | 0.0121 (8) | 0.0055 (7) | 0.0035 (7) |
N3 | 0.0446 (9) | 0.0289 (9) | 0.0390 (9) | 0.0081 (7) | 0.0091 (7) | 0.0020 (7) |
N4 | 0.0434 (9) | 0.0264 (9) | 0.0391 (8) | 0.0086 (7) | 0.0076 (7) | 0.0037 (7) |
N5 | 0.0455 (10) | 0.0309 (9) | 0.0344 (8) | −0.0067 (8) | −0.0049 (7) | 0.0143 (7) |
O1 | 0.0874 (11) | 0.0259 (7) | 0.0268 (6) | 0.0060 (7) | −0.0025 (6) | −0.0047 (5) |
O2 | 0.0642 (9) | 0.0285 (7) | 0.0213 (6) | 0.0072 (6) | 0.0072 (5) | 0.0076 (5) |
O3 | 0.0521 (8) | 0.0360 (8) | 0.0371 (7) | −0.0124 (6) | 0.0057 (6) | 0.0016 (6) |
O4 | 0.0783 (11) | 0.0614 (10) | 0.0263 (7) | −0.0223 (8) | 0.0034 (7) | −0.0059 (6) |
O5 | 0.0648 (9) | 0.0375 (8) | 0.0297 (7) | 0.0058 (6) | 0.0163 (6) | 0.0107 (5) |
O6 | 0.0592 (8) | 0.0252 (7) | 0.0393 (7) | 0.0009 (6) | 0.0146 (6) | 0.0079 (6) |
O7 | 0.0637 (10) | 0.0433 (9) | 0.0349 (7) | −0.0004 (7) | 0.0066 (7) | −0.0058 (6) |
C1—C6 | 1.382 (2) | C12—H12 | 0.9300 |
C1—C2 | 1.385 (2) | C13—C14 | 1.337 (3) |
C1—C7 | 1.513 (2) | C13—N3 | 1.369 (2) |
C2—C3 | 1.396 (2) | C13—H13 | 0.9300 |
C2—H2 | 0.9300 | C14—N4 | 1.369 (2) |
C3—C4 | 1.382 (2) | C14—H14 | 0.9300 |
C3—C8 | 1.517 (2) | C15—N3 | 1.317 (2) |
C4—C5 | 1.390 (2) | C15—N4 | 1.318 (2) |
C4—H4 | 0.9300 | C15—H15 | 0.9300 |
C5—C6 | 1.391 (2) | C16—N5 | 1.481 (3) |
C5—C9 | 1.506 (2) | C16—C17i | 1.497 (3) |
C6—H6 | 0.9300 | C16—H16A | 0.9700 |
C7—O1 | 1.236 (2) | C16—H16B | 0.9700 |
C7—O2 | 1.272 (2) | C17—N5 | 1.477 (2) |
C8—O4 | 1.233 (2) | C17—C16i | 1.497 (3) |
C8—O3 | 1.265 (2) | C17—H17A | 0.9700 |
C9—O5 | 1.251 (2) | C17—H17B | 0.9700 |
C9—O6 | 1.264 (2) | N1—H1A | 0.87 (2) |
C10—N1 | 1.307 (2) | N2—H2A | 0.90 (2) |
C10—N2 | 1.324 (2) | N3—H3A | 0.915 (19) |
C10—H10 | 0.9300 | N4—H4A | 0.93 (2) |
C11—C12 | 1.345 (3) | N5—H5A | 0.98 (2) |
C11—N1 | 1.361 (2) | N5—H5B | 0.91 (2) |
C11—H11 | 0.9300 | O7—H7A | 0.86 (3) |
C12—N2 | 1.365 (2) | O7—H7B | 0.90 (3) |
C6—C1—C2 | 119.32 (14) | N3—C13—H13 | 126.6 |
C6—C1—C7 | 119.29 (14) | C13—C14—N4 | 107.51 (16) |
C2—C1—C7 | 121.39 (15) | C13—C14—H14 | 126.2 |
C1—C2—C3 | 120.66 (15) | N4—C14—H14 | 126.2 |
C1—C2—H2 | 119.7 | N3—C15—N4 | 109.13 (17) |
C3—C2—H2 | 119.7 | N3—C15—H15 | 125.4 |
C4—C3—C2 | 118.85 (14) | N4—C15—H15 | 125.4 |
C4—C3—C8 | 119.66 (14) | N5—C16—C17i | 110.90 (16) |
C2—C3—C8 | 121.48 (15) | N5—C16—H16A | 109.5 |
C3—C4—C5 | 121.49 (14) | C17i—C16—H16A | 109.5 |
C3—C4—H4 | 119.3 | N5—C16—H16B | 109.5 |
C5—C4—H4 | 119.3 | C17i—C16—H16B | 109.5 |
C4—C5—C6 | 118.38 (15) | H16A—C16—H16B | 108.0 |
C4—C5—C9 | 120.74 (14) | N5—C17—C16i | 111.07 (16) |
C6—C5—C9 | 120.88 (15) | N5—C17—H17A | 109.4 |
C1—C6—C5 | 121.22 (15) | C16i—C17—H17A | 109.4 |
C1—C6—H6 | 119.4 | N5—C17—H17B | 109.4 |
C5—C6—H6 | 119.4 | C16i—C17—H17B | 109.4 |
O1—C7—O2 | 124.44 (15) | H17A—C17—H17B | 108.0 |
O1—C7—C1 | 117.75 (16) | C10—N1—C11 | 108.59 (15) |
O2—C7—C1 | 117.81 (14) | C10—N1—H1A | 124.3 (14) |
O4—C8—O3 | 124.28 (16) | C11—N1—H1A | 127.1 (14) |
O4—C8—C3 | 117.93 (16) | C10—N2—C12 | 108.49 (16) |
O3—C8—C3 | 117.79 (14) | C10—N2—H2A | 122.6 (13) |
O5—C9—O6 | 122.58 (16) | C12—N2—H2A | 128.7 (13) |
O5—C9—C5 | 119.37 (16) | C15—N3—C13 | 108.45 (16) |
O6—C9—C5 | 118.05 (14) | C15—N3—H3A | 125.6 (13) |
N1—C10—N2 | 108.95 (18) | C13—N3—H3A | 125.7 (12) |
N1—C10—H10 | 125.5 | C15—N4—C14 | 108.03 (16) |
N2—C10—H10 | 125.5 | C15—N4—H4A | 126.1 (12) |
C12—C11—N1 | 107.52 (17) | C14—N4—H4A | 125.8 (12) |
C12—C11—H11 | 126.2 | C17—N5—C16 | 110.82 (14) |
N1—C11—H11 | 126.2 | C17—N5—H5A | 113.0 (11) |
C11—C12—N2 | 106.45 (17) | C16—N5—H5A | 110.0 (11) |
C11—C12—H12 | 126.8 | C17—N5—H5B | 108.4 (13) |
N2—C12—H12 | 126.8 | C16—N5—H5B | 107.1 (13) |
C14—C13—N3 | 106.88 (17) | H5A—N5—H5B | 107.3 (16) |
C14—C13—H13 | 126.6 | H7A—O7—H7B | 108 (2) |
C6—C1—C2—C3 | 2.5 (2) | C4—C3—C8—O3 | −166.35 (16) |
C7—C1—C2—C3 | −178.26 (15) | C2—C3—C8—O3 | 12.2 (3) |
C1—C2—C3—C4 | −1.7 (3) | C4—C5—C9—O5 | −14.7 (3) |
C1—C2—C3—C8 | 179.66 (15) | C6—C5—C9—O5 | 165.86 (16) |
C2—C3—C4—C5 | −1.0 (3) | C4—C5—C9—O6 | 165.85 (16) |
C8—C3—C4—C5 | 177.65 (15) | C6—C5—C9—O6 | −13.6 (2) |
C3—C4—C5—C6 | 2.9 (3) | N1—C11—C12—N2 | −0.3 (2) |
C3—C4—C5—C9 | −176.58 (15) | N3—C13—C14—N4 | −0.3 (2) |
C2—C1—C6—C5 | −0.5 (2) | N2—C10—N1—C11 | −0.1 (2) |
C7—C1—C6—C5 | −179.78 (15) | C12—C11—N1—C10 | 0.3 (2) |
C4—C5—C6—C1 | −2.1 (2) | N1—C10—N2—C12 | 0.0 (2) |
C9—C5—C6—C1 | 177.32 (15) | C11—C12—N2—C10 | 0.2 (2) |
C6—C1—C7—O1 | 17.1 (2) | N4—C15—N3—C13 | −0.5 (2) |
C2—C1—C7—O1 | −162.20 (16) | C14—C13—N3—C15 | 0.5 (2) |
C6—C1—C7—O2 | −163.16 (15) | N3—C15—N4—C14 | 0.3 (2) |
C2—C1—C7—O2 | 17.6 (2) | C13—C14—N4—C15 | 0.0 (2) |
C4—C3—C8—O4 | 13.2 (3) | C16i—C17—N5—C16 | 56.2 (2) |
C2—C3—C8—O4 | −168.22 (17) | C17i—C16—N5—C17 | −56.1 (2) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2 | 0.87 (2) | 1.83 (2) | 2.6870 (18) | 166.9 (19) |
N2—H2A···O5ii | 0.90 (2) | 1.86 (2) | 2.7522 (19) | 177.4 (19) |
N3—H3A···O6 | 0.915 (19) | 1.80 (2) | 2.701 (2) | 168.8 (18) |
N4—H4A···O2iii | 0.93 (2) | 1.74 (2) | 2.668 (2) | 176.6 (18) |
N5—H5A···O3iv | 0.98 (2) | 1.83 (2) | 2.7872 (19) | 166.7 (17) |
N5—H5A···O4iv | 0.98 (2) | 2.60 (2) | 3.366 (2) | 135.7 (14) |
N5—H5B···O5 | 0.91 (2) | 2.19 (2) | 2.985 (2) | 145.2 (16) |
N5—H5B···O6 | 0.91 (2) | 2.10 (2) | 2.888 (2) | 145.1 (18) |
O7—H7A···O1 | 0.86 (3) | 1.86 (3) | 2.7184 (17) | 171 (2) |
O7—H7B···O3v | 0.90 (3) | 1.95 (3) | 2.840 (2) | 169 (2) |
C10—H10···O7 | 0.93 | 2.35 | 3.217 (3) | 156 |
C12—H12···O4ii | 0.93 | 2.32 | 3.244 (2) | 175 |
C13—H13···O1 | 0.93 | 2.36 | 3.267 (2) | 164 |
C14—H14···O3v | 0.93 | 2.51 | 3.372 (2) | 154 |
C15—H15···O7vi | 0.93 | 2.38 | 3.186 (2) | 145 |
C16—H16B···O4vii | 0.97 | 2.32 | 3.200 (2) | 150 |
C16—H16A···O7vi | 0.97 | 2.48 | 3.207 (2) | 132 |
Symmetry codes: (ii) x, y, z+1; (iii) x, y+1, z; (iv) x+1, y+1, z; (v) −x, −y, −z+2; (vi) −x+1, −y+1, −z+2; (vii) −x, −y, −z+1. |
Experimental details
Crystal data | |
Chemical formula | 4C3H5N2+·C4H12N2+·2C9H3O63−·2H2O |
Mr | 814.78 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 298 |
a, b, c (Å) | 7.1548 (4), 9.9424 (5), 13.3567 (7) |
α, β, γ (°) | 96.895 (1), 95.201 (1), 101.439 (2) |
V (Å3) | 918.11 (8) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.12 |
Crystal size (mm) | 0.20 × 0.13 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART APEX CCD area-detector |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.967, 0.989 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10341, 3925, 2757 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.639 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.122, 1.04 |
No. of reflections | 3925 |
No. of parameters | 286 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.31, −0.19 |
Computer programs: SMART (Bruker, 2001), SAINT-Plus (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008) and PLATON (Spek, 2009), PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O2 | 0.87 (2) | 1.83 (2) | 2.6870 (18) | 166.9 (19) |
N2—H2A···O5i | 0.90 (2) | 1.86 (2) | 2.7522 (19) | 177.4 (19) |
N3—H3A···O6 | 0.915 (19) | 1.80 (2) | 2.701 (2) | 168.8 (18) |
N4—H4A···O2ii | 0.93 (2) | 1.74 (2) | 2.668 (2) | 176.6 (18) |
N5—H5A···O3iii | 0.98 (2) | 1.83 (2) | 2.7872 (19) | 166.7 (17) |
N5—H5A···O4iii | 0.98 (2) | 2.60 (2) | 3.366 (2) | 135.7 (14) |
N5—H5B···O5 | 0.91 (2) | 2.19 (2) | 2.985 (2) | 145.2 (16) |
N5—H5B···O6 | 0.91 (2) | 2.10 (2) | 2.888 (2) | 145.1 (18) |
O7—H7A···O1 | 0.86 (3) | 1.86 (3) | 2.7184 (17) | 171 (2) |
O7—H7B···O3iv | 0.90 (3) | 1.95 (3) | 2.840 (2) | 169 (2) |
C10—H10···O7 | 0.93 | 2.35 | 3.217 (3) | 155.9 |
C12—H12···O4i | 0.93 | 2.32 | 3.244 (2) | 174.8 |
C13—H13···O1 | 0.93 | 2.36 | 3.267 (2) | 164.1 |
C14—H14···O3iv | 0.93 | 2.51 | 3.372 (2) | 154.0 |
C15—H15···O7v | 0.93 | 2.38 | 3.186 (2) | 145.4 |
C16—H16B···O4vi | 0.97 | 2.32 | 3.200 (2) | 150.1 |
C16—H16A···O7v | 0.97 | 2.48 | 3.207 (2) | 131.7 |
Symmetry codes: (i) x, y, z+1; (ii) x, y+1, z; (iii) x+1, y+1, z; (iv) −x, −y, −z+2; (v) −x+1, −y+1, −z+2; (vi) −x, −y, −z+1. |
Piperazine has been used in the manufacture of anthelmintic vermicide. In order to improve its pharmaceutical effect, piperazine has been made into tablets containing two or more components (Jacobs et al., 2009; Oswald et al., 2002; Wang & Jia, 2008). In this paper, we report a new four-component piperazine containing adduct and the crystal structure is presented herein.
The formula unit of the title compound is shown in Fig. 1. The asymmetric unit is composed of two imidazolium cations, half a piperazinium cation, one benzene 1,3,5-tricarboxylate trianion and one water molecule. During the crystallization, the carboxylic acid protons of benzene-1,3,5-tricarboxylic acid were transferred to the imidazole and piperazine nitrogen atoms, forming the 4:1:2:2 organic adduct (imidazolium: piperazinium: benzene 1,3,5-tricarboxylate: water). Delocalization of charges on the the imidazolium and the benzene-1,3,5-tricarboxylate ions are reflected in the bond distances of C15—N3, C15—N4, C9—O5 and C9—O6. The mean planes of the three carboxylate groups in the anion twisted away from the central benzene ring with dihedral angles of 13.5 (1)°, 14.5 (1)° and 16.9 (1)°.
In the crystal packing, the component ions are linked into a complex three-dimensional network by a combination of N—H···O, O—H···O and C—H···O hydrogen bonds (Table 1 and Figure 2). A PLATON (Spek, 2009) analysis shows that the crystal structure is further consolidated by a π···π interaction [Cg1···Cg1(1 - x, 1 - y, 2 - z) = 3.393 (2) Å, dihedral angle = 0°, Cg1 is the centroid defined by atoms N3/N4/C13—C15] and a C=O···π interaction (C9···Cg2 = 3.472 (2) Å, O5···Cg2 = 3.363 (2)Å and C9=O5···Cg2 = 84.4 (2)°, Cg2 is th centroid defined by atoms N1/N2/C10—C12). These types of weak interactions have previously been studied (Gao et al., 2009, Schottel et al., 2008).