The title compound is built up from the benzodiazepine ring system linked to the pyridyl and pendant dihydropyran rings. In the crystal, N—H
O and C—H
O hydrogen bonds link the molecules into a three-dimensional network. A weak C—H
π interaction is also observed.
Supporting information
CCDC reference: 1890950
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.002 Å
- R factor = 0.040
- wR factor = 0.112
- Data-to-parameter ratio = 14.5
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT480_ALERT_4_C Long H...A H-Bond Reported H5 ..O2 . 2.72 Ang.
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 2.021 Check
Alert level G
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 2 Report
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 30 Note
PLAT933_ALERT_2_G Number of OMIT Records in Embedded .res File ... 1 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 12 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
2 ALERT level C = Check. Ensure it is not caused by an omission or oversight
4 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
2 ALERT type 2 Indicator that the structure model may be wrong or deficient
1 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level A
PUBL024_ALERT_1_A The number of authors is greater than 5.
Please specify the role of each of the co-authors
for your paper.
1 ALERT level A = Data missing that is essential or data in wrong format
0 ALERT level G = General alerts. Data that may be required is missing
Data collection: CrysAlis PRO (Rigaku OD, 2015); cell refinement: CrysAlis PRO (Rigaku OD, 2015); data reduction: CrysAlis PRO (Rigaku OD, 2015); program(s) used to solve structure: SHELXT (Sheldrick, 2015b); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015a); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).
3-(4,4-Dimethyl-2,3,4,5-tetrahydro-1
H-1,5-benzodiazepin-2-ylidene)-6-methyl-3,4-dihydro-2
H-pyran-2,4-dione
top
Crystal data top
C17H18N2O3 | F(000) = 632 |
Mr = 298.33 | Dx = 1.300 Mg m−3 |
Monoclinic, P21/n | Cu Kα radiation, λ = 1.54184 Å |
a = 5.5373 (1) Å | Cell parameters from 4280 reflections |
b = 24.0197 (4) Å | θ = 3.8–71.5° |
c = 11.7815 (3) Å | µ = 0.74 mm−1 |
β = 103.488 (2)° | T = 296 K |
V = 1523.77 (6) Å3 | Prism, yellow |
Z = 4 | 0.42 × 0.38 × 0.16 mm |
Data collection top
Rigaku Oxford Diffraction diffractometer | 2934 independent reflections |
Radiation source: fine-focus sealed X-ray tube, Enhance (Cu) X-ray Source | 2519 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
Detector resolution: 16.0416 pixels mm-1 | θmax = 71.3°, θmin = 3.7° |
ω scans | h = −5→6 |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD 2015) | k = −27→29 |
Tmin = 0.700, Tmax = 1.000 | l = −14→14 |
9860 measured reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.040 | w = 1/[σ2(Fo2) + (0.0578P)2 + 0.3037P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.112 | (Δ/σ)max = 0.001 |
S = 1.05 | Δρmax = 0.20 e Å−3 |
2934 reflections | Δρmin = −0.16 e Å−3 |
203 parameters | Extinction correction: SHELXL2014 (Sheldrick, 2015a), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0020 (3) |
Primary atom site location: dual | |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.9607 (2) | 0.55040 (5) | 0.34659 (11) | 0.0620 (4) | |
O2 | 0.3736 (2) | 0.69299 (4) | 0.35380 (9) | 0.0499 (3) | |
O3 | 0.45601 (19) | 0.62933 (4) | 0.48899 (9) | 0.0430 (3) | |
N1 | 0.8514 (2) | 0.61406 (5) | 0.17042 (11) | 0.0406 (3) | |
H1 | 0.9435 | 0.5909 | 0.2170 | 0.049* | |
N2 | 0.7655 (3) | 0.71643 (5) | 0.01003 (11) | 0.0478 (3) | |
H2 | 0.7686 | 0.7426 | −0.0394 | 0.057* | |
C1 | 0.6776 (2) | 0.63806 (5) | 0.21295 (12) | 0.0350 (3) | |
C2 | 0.5128 (2) | 0.67882 (6) | 0.13633 (12) | 0.0382 (3) | |
H2A | 0.3856 | 0.6910 | 0.1752 | 0.046* | |
H2B | 0.4303 | 0.6602 | 0.0648 | 0.046* | |
C3 | 0.6492 (2) | 0.73059 (5) | 0.10487 (11) | 0.0342 (3) | |
C4 | 0.8700 (2) | 0.66752 (6) | −0.01123 (12) | 0.0377 (3) | |
C5 | 0.9507 (3) | 0.66471 (7) | −0.11604 (14) | 0.0491 (4) | |
H5 | 0.9191 | 0.6948 | −0.1670 | 0.059* | |
C6 | 1.0733 (4) | 0.61968 (8) | −0.14591 (17) | 0.0644 (5) | |
H6 | 1.1245 | 0.6198 | −0.2157 | 0.077* | |
C7 | 1.1215 (4) | 0.57393 (8) | −0.0726 (2) | 0.0733 (6) | |
H7 | 1.2073 | 0.5434 | −0.0917 | 0.088* | |
C8 | 1.0400 (4) | 0.57462 (7) | 0.02874 (18) | 0.0597 (5) | |
H8 | 1.0711 | 0.5439 | 0.0780 | 0.072* | |
C9 | 0.9117 (3) | 0.62000 (6) | 0.06068 (13) | 0.0406 (3) | |
C10 | 0.6538 (2) | 0.62144 (5) | 0.32672 (12) | 0.0355 (3) | |
C11 | 0.7997 (3) | 0.57556 (6) | 0.38662 (13) | 0.0434 (3) | |
C12 | 0.7494 (3) | 0.55810 (6) | 0.49603 (13) | 0.0483 (4) | |
H12 | 0.8365 | 0.5281 | 0.5357 | 0.058* | |
C13 | 0.5820 (3) | 0.58377 (6) | 0.54124 (13) | 0.0429 (3) | |
C14 | 0.4890 (2) | 0.65029 (5) | 0.38391 (11) | 0.0360 (3) | |
C15 | 0.5058 (4) | 0.56883 (8) | 0.65044 (15) | 0.0594 (4) | |
H15A | 0.5417 | 0.5993 | 0.7045 | 0.089* | |
H15B | 0.5957 | 0.5364 | 0.6845 | 0.089* | |
H15C | 0.3309 | 0.5611 | 0.6327 | 0.089* | |
C16 | 0.8401 (3) | 0.75272 (6) | 0.20995 (13) | 0.0459 (4) | |
H16A | 0.9684 | 0.7255 | 0.2348 | 0.069* | |
H16B | 0.7605 | 0.7602 | 0.2725 | 0.069* | |
H16C | 0.9118 | 0.7864 | 0.1888 | 0.069* | |
C17 | 0.4561 (3) | 0.77557 (6) | 0.05783 (13) | 0.0457 (4) | |
H17A | 0.5355 | 0.8065 | 0.0297 | 0.069* | |
H17B | 0.3814 | 0.7880 | 0.1192 | 0.069* | |
H17C | 0.3303 | 0.7605 | −0.0049 | 0.069* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0764 (8) | 0.0527 (7) | 0.0685 (8) | 0.0335 (6) | 0.0406 (6) | 0.0244 (6) |
O2 | 0.0595 (7) | 0.0469 (6) | 0.0441 (6) | 0.0227 (5) | 0.0136 (5) | 0.0028 (4) |
O3 | 0.0484 (6) | 0.0432 (5) | 0.0407 (5) | 0.0071 (4) | 0.0171 (4) | 0.0020 (4) |
N1 | 0.0468 (7) | 0.0331 (6) | 0.0463 (7) | 0.0048 (5) | 0.0197 (5) | 0.0062 (5) |
N2 | 0.0655 (8) | 0.0409 (6) | 0.0456 (7) | 0.0080 (6) | 0.0304 (6) | 0.0104 (5) |
C1 | 0.0371 (7) | 0.0296 (6) | 0.0400 (7) | −0.0031 (5) | 0.0122 (5) | 0.0007 (5) |
C2 | 0.0335 (6) | 0.0443 (7) | 0.0373 (7) | −0.0013 (5) | 0.0095 (5) | 0.0056 (6) |
C3 | 0.0351 (7) | 0.0353 (7) | 0.0338 (6) | 0.0037 (5) | 0.0110 (5) | 0.0048 (5) |
C4 | 0.0371 (7) | 0.0405 (7) | 0.0375 (7) | −0.0075 (5) | 0.0131 (5) | −0.0052 (5) |
C5 | 0.0563 (9) | 0.0541 (9) | 0.0424 (8) | −0.0096 (7) | 0.0225 (7) | −0.0055 (6) |
C6 | 0.0835 (13) | 0.0615 (10) | 0.0630 (11) | −0.0134 (9) | 0.0472 (10) | −0.0181 (9) |
C7 | 0.0968 (15) | 0.0455 (9) | 0.0989 (15) | −0.0026 (9) | 0.0660 (13) | −0.0179 (9) |
C8 | 0.0756 (12) | 0.0344 (7) | 0.0830 (12) | −0.0005 (7) | 0.0469 (10) | −0.0019 (7) |
C9 | 0.0441 (7) | 0.0350 (7) | 0.0486 (8) | −0.0060 (5) | 0.0223 (6) | −0.0053 (6) |
C10 | 0.0395 (7) | 0.0297 (6) | 0.0389 (7) | 0.0018 (5) | 0.0125 (6) | 0.0026 (5) |
C11 | 0.0495 (8) | 0.0355 (7) | 0.0492 (8) | 0.0087 (6) | 0.0197 (6) | 0.0079 (6) |
C12 | 0.0584 (9) | 0.0408 (7) | 0.0483 (8) | 0.0116 (6) | 0.0178 (7) | 0.0142 (6) |
C13 | 0.0509 (8) | 0.0389 (7) | 0.0398 (7) | −0.0001 (6) | 0.0128 (6) | 0.0038 (6) |
C14 | 0.0378 (7) | 0.0342 (6) | 0.0351 (6) | 0.0023 (5) | 0.0067 (5) | −0.0004 (5) |
C15 | 0.0751 (11) | 0.0606 (10) | 0.0477 (9) | 0.0014 (8) | 0.0251 (8) | 0.0077 (7) |
C16 | 0.0445 (8) | 0.0412 (8) | 0.0490 (8) | 0.0001 (6) | 0.0048 (6) | −0.0002 (6) |
C17 | 0.0462 (8) | 0.0482 (8) | 0.0437 (8) | 0.0121 (6) | 0.0127 (6) | 0.0121 (6) |
Geometric parameters (Å, º) top
O1—C11 | 1.2569 (18) | C6—H6 | 0.9300 |
O2—C14 | 1.2167 (17) | C6—C7 | 1.385 (3) |
O3—C13 | 1.3649 (18) | C7—H7 | 0.9300 |
O3—C14 | 1.3874 (16) | C7—C8 | 1.372 (3) |
N1—H1 | 0.8600 | C8—H8 | 0.9300 |
N1—C1 | 1.3168 (18) | C8—C9 | 1.400 (2) |
N1—C9 | 1.4158 (18) | C10—C11 | 1.4487 (18) |
N2—H2 | 0.8600 | C10—C14 | 1.4331 (18) |
N2—C3 | 1.4542 (17) | C11—C12 | 1.443 (2) |
N2—C4 | 1.3584 (19) | C12—H12 | 0.9300 |
C1—C2 | 1.4907 (18) | C12—C13 | 1.324 (2) |
C1—C10 | 1.4338 (18) | C13—C15 | 1.488 (2) |
C2—H2A | 0.9700 | C15—H15A | 0.9600 |
C2—H2B | 0.9700 | C15—H15B | 0.9600 |
C2—C3 | 1.5444 (18) | C15—H15C | 0.9600 |
C3—C16 | 1.524 (2) | C16—H16A | 0.9600 |
C3—C17 | 1.5301 (18) | C16—H16B | 0.9600 |
C4—C5 | 1.4094 (19) | C16—H16C | 0.9600 |
C4—C9 | 1.408 (2) | C17—H17A | 0.9600 |
C5—H5 | 0.9300 | C17—H17B | 0.9600 |
C5—C6 | 1.366 (2) | C17—H17C | 0.9600 |
| | | |
O1···N1 | 2.5351 (18) | C6···H2Biv | 2.95 |
O1···C12i | 3.379 (2) | C7···H2Biv | 2.92 |
O2···N2ii | 2.9990 (16) | C8···H2Biv | 2.94 |
O2···C2 | 2.8628 (17) | C9···H2B | 2.85 |
O1···H12i | 2.45 | C11···H1 | 2.35 |
O1···H1 | 1.79 | C14···H2A | 2.58 |
O2···H2A | 2.12 | C14···H17Ciii | 2.95 |
O2···H2ii | 2.16 | C16···O2iv | 3.3648 (19) |
O2···H5ii | 2.72 | H1···H8 | 2.24 |
O2···H17Ciii | 2.91 | H2···H5 | 2.21 |
N1···N2 | 3.0698 (17) | H2···H17A | 2.27 |
N1···C16 | 3.3656 (19) | H2···H17C | 2.59 |
N2···N1 | 3.0698 (17) | H2A···H17B | 2.42 |
N1···H16A | 2.8152 | H2B···H17C | 2.57 |
C4···C2iv | 3.5887 (17) | H5···H16Bv | 2.42 |
C9···C2iv | 3.533 (2) | H5···H17Bv | 2.51 |
C14···C17iii | 3.404 (2) | H12···H15B | 2.45 |
C1···H16A | 2.62 | H12···H12i | 2.55 |
C4···H2B | 2.79 | H16A···O2iv | 2.48 |
C5···H2Biv | 2.99 | H16B···H17B | 2.52 |
C5···H16Bv | 2.99 | H16C···H17A | 2.50 |
| | | |
C13—O3—C14 | 122.24 (11) | C4—C9—N1 | 126.21 (12) |
C1—N1—H1 | 114.6 | C8—C9—N1 | 114.18 (14) |
C1—N1—C9 | 130.71 (12) | C8—C9—C4 | 119.45 (14) |
C9—N1—H1 | 114.6 | C1—C10—C11 | 120.32 (12) |
C3—N2—H2 | 115.5 | C14—C10—C1 | 120.82 (12) |
C4—N2—H2 | 115.5 | C14—C10—C11 | 118.85 (12) |
C4—N2—C3 | 128.91 (11) | O1—C11—C10 | 123.15 (13) |
N1—C1—C2 | 117.10 (12) | O1—C11—C12 | 119.80 (13) |
N1—C1—C10 | 117.94 (12) | C12—C11—C10 | 117.03 (12) |
C10—C1—C2 | 124.90 (12) | C11—C12—H12 | 119.2 |
C1—C2—H2A | 108.7 | C13—C12—C11 | 121.53 (13) |
C1—C2—H2B | 108.7 | C13—C12—H12 | 119.2 |
C1—C2—C3 | 114.17 (11) | O3—C13—C15 | 111.40 (13) |
H2A—C2—H2B | 107.6 | C12—C13—O3 | 121.61 (13) |
C3—C2—H2A | 108.7 | C12—C13—C15 | 126.99 (14) |
C3—C2—H2B | 108.7 | O2—C14—O3 | 113.36 (12) |
N2—C3—C2 | 108.97 (11) | O2—C14—C10 | 128.26 (13) |
N2—C3—C16 | 110.99 (12) | O3—C14—C10 | 118.35 (11) |
N2—C3—C17 | 106.51 (11) | C13—C15—H15A | 109.5 |
C16—C3—C2 | 111.80 (11) | C13—C15—H15B | 109.5 |
C16—C3—C17 | 109.98 (12) | C13—C15—H15C | 109.5 |
C17—C3—C2 | 108.41 (11) | H15A—C15—H15B | 109.5 |
N2—C4—C5 | 116.02 (13) | H15A—C15—H15C | 109.5 |
N2—C4—C9 | 127.38 (12) | H15B—C15—H15C | 109.5 |
C9—C4—C5 | 116.58 (13) | C3—C16—H16A | 109.5 |
C4—C5—H5 | 118.6 | C3—C16—H16B | 109.5 |
C6—C5—C4 | 122.80 (16) | C3—C16—H16C | 109.5 |
C6—C5—H5 | 118.6 | H16A—C16—H16B | 109.5 |
C5—C6—H6 | 119.9 | H16A—C16—H16C | 109.5 |
C5—C6—C7 | 120.20 (15) | H16B—C16—H16C | 109.5 |
C7—C6—H6 | 119.9 | C3—C17—H17A | 109.5 |
C6—C7—H7 | 120.7 | C3—C17—H17B | 109.5 |
C8—C7—C6 | 118.58 (16) | C3—C17—H17C | 109.5 |
C8—C7—H7 | 120.7 | H17A—C17—H17B | 109.5 |
C7—C8—H8 | 118.9 | H17A—C17—H17C | 109.5 |
C7—C8—C9 | 122.30 (17) | H17B—C17—H17C | 109.5 |
C9—C8—H8 | 118.9 | | |
| | | |
C9—N1—C1—C10 | 177.02 (13) | C1—N1—C9—C8 | −157.26 (15) |
C9—N1—C1—C2 | −0.3 (2) | C1—N1—C9—C4 | 27.4 (2) |
N1—C1—C2—C3 | −63.12 (16) | N1—C1—C10—C14 | 172.65 (12) |
C10—C1—C2—C3 | 119.73 (14) | C2—C1—C10—C14 | −10.2 (2) |
C4—N2—C3—C16 | 88.57 (18) | N1—C1—C10—C11 | −6.4 (2) |
C4—N2—C3—C17 | −151.73 (15) | C2—C1—C10—C11 | 170.76 (13) |
C4—N2—C3—C2 | −35.0 (2) | C14—C10—C11—O1 | −175.06 (15) |
C1—C2—C3—N2 | 80.67 (14) | C1—C10—C11—O1 | 4.0 (2) |
C1—C2—C3—C16 | −42.38 (16) | C14—C10—C11—C12 | 6.4 (2) |
C1—C2—C3—C17 | −163.79 (12) | C1—C10—C11—C12 | −174.60 (13) |
C3—N2—C4—C9 | −6.6 (3) | O1—C11—C12—C13 | 179.64 (16) |
C3—N2—C4—C5 | 174.97 (14) | C10—C11—C12—C13 | −1.7 (2) |
N2—C4—C5—C6 | 175.76 (16) | C11—C12—C13—O3 | −2.6 (3) |
C9—C4—C5—C6 | −2.8 (2) | C11—C12—C13—C15 | 177.58 (16) |
C4—C5—C6—C7 | 0.6 (3) | C14—O3—C13—C12 | 2.2 (2) |
C5—C6—C7—C8 | 1.1 (3) | C14—O3—C13—C15 | −177.94 (13) |
C6—C7—C8—C9 | −0.4 (3) | C13—O3—C14—O2 | −175.69 (13) |
C7—C8—C9—C4 | −1.9 (3) | C13—O3—C14—C10 | 2.60 (19) |
C7—C8—C9—N1 | −177.57 (18) | C1—C10—C14—O2 | −7.8 (2) |
N2—C4—C9—C8 | −174.98 (16) | C11—C10—C14—O2 | 171.19 (14) |
C5—C4—C9—C8 | 3.4 (2) | C1—C10—C14—O3 | 174.15 (12) |
N2—C4—C9—N1 | 0.1 (2) | C11—C10—C14—O3 | −6.81 (19) |
C5—C4—C9—N1 | 178.49 (14) | | |
Symmetry codes: (i) −x+2, −y+1, −z+1; (ii) x−1/2, −y+3/2, z+1/2; (iii) x+1/2, −y+3/2, z+1/2; (iv) x+1, y, z; (v) x+1/2, −y+3/2, z−1/2. |
Hydrogen-bond geometry (Å, º) topCg is the centroid of the C4–C9 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O1 | 0.86 | 1.79 | 2.5351 (18) | 143 |
N2—H2···O2v | 0.86 | 2.16 | 2.9990 (16) | 166 |
C2—H2A···O2 | 0.97 | 2.12 | 2.8628 (17) | 132 |
C5—H5···O2v | 0.93 | 2.72 | 3.453 (2) | 136 |
C12—H12···O1i | 0.93 | 2.45 | 3.3789 (18) | 174 |
C16—H16A···O2iv | 0.96 | 2.48 | 3.3646 (18) | 154 |
C2—H2B···Cgvi | 0.97 | 2.63 | 3.4428 (15) | 141 |
Symmetry codes: (i) −x+2, −y+1, −z+1; (iv) x+1, y, z; (v) x+1/2, −y+3/2, z−1/2; (vi) x−1, y, z. |