The title compound, [Zn(C7H4NO4)2(C10H14N2O)2(H2O)2], crystallizes as centrosymmetric mononuclear molecules with octahedrally coordinated zinc, all pairs of equivalent ligands being mutually trans. Intramolecular hydrogen bonding links each aqua ligand with an uncoordinated carboxylate O atom, and intermolecular hydrogen bonding between aqua ligands and the carbonyl O atoms of N,N-diethylnicotinamide ligands link the molecules together into chains.
Supporting information
CCDC reference: 175337
Key indicators
- Single-crystal X-ray study
- T = 160 K
- Mean (C-C) = 0.003 Å
- R factor = 0.026
- wR factor = 0.068
- Data-to-parameter ratio = 12.8
checkCIF results
No syntax errors found
ADDSYM reports no extra symmetry
General Notes
ABSTM_02 When printed, the submitted absorption T values will be replaced
by the scaled T values. Since the ratio of scaled T's is
identical to the ratio of reported T values, the scaling does
not imply a change to the absorption corrections used in the
study.
Ratio of Tmax expected/reported 0.905
Tmax scaled 0.868 Tmin scaled 0.743
The title compound was prepared by the reaction of 4.34 g (0.01 mol) of
[Zn(OH2)2(4-O2NC6H4COO)2] and 2.56 g (0.02 mol) of
diethylnicotinamide in 100 ml water. The solution was filtered and set aside
for crystallization at ambient temperature for a few days. Suitable colourless
crystals were obtained.
H atoms were placed geometrically and refined with a riding model (including
free rotation about C—C bonds), and with Uiso constrained to be 1.2
(1.5 for methyl groups) times Ueq of the carrier atom, except for
aqua ligand H atoms, which were refined freely with individual Uiso.
Data collection: DIF4 (Stoe & Cie, 1988); cell refinement: DIF4; data reduction: local programs; program(s) used to solve structure: SHELXTL (Sheldrick, 1997); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and local programs.
Diaquabis(
N,
N-diethylnicotinamide)bis(4-nitrobenzoato)zinc(II)
top
Crystal data top
[Zn(C7H4NO4)2(C10H14N2O)2(H2O)2] | Z = 1 |
Mr = 790.09 | F(000) = 412 |
Triclinic, P1 | Dx = 1.436 Mg m−3 |
a = 7.211 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 8.588 (4) Å | Cell parameters from 36 reflections |
c = 16.515 (7) Å | θ = 10.7–12.5° |
α = 96.00 (2)° | µ = 0.74 mm−1 |
β = 100.79 (2)° | T = 160 K |
γ = 112.09 (3)° | Block, colourless |
V = 913.6 (7) Å3 | 0.42 × 0.27 × 0.19 mm |
Data collection top
Stoe-Siemens four-circle diffractometer | 2889 reflections with I > 2σ(I) |
Radiation source: sealed tube | Rint = 0.020 |
Graphite monochromator | θmax = 25.0°, θmin = 2.6° |
ω/θ scans with on–line profile fitting (Clegg, 1981) | h = −8→8 |
Absorption correction: ψ scan (XPREP; Sheldrick, 1997) | k = −10→10 |
Tmin = 0.821, Tmax = 0.959 | l = −19→19 |
6298 measured reflections | 5 standard reflections every 60 min |
3214 independent reflections | intensity decay: 1% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.026 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.068 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0275P)2 + 0.4095P] where P = (Fo2 + 2Fc2)/3 |
3214 reflections | (Δ/σ)max < 0.001 |
251 parameters | Δρmax = 0.33 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
Crystal data top
[Zn(C7H4NO4)2(C10H14N2O)2(H2O)2] | γ = 112.09 (3)° |
Mr = 790.09 | V = 913.6 (7) Å3 |
Triclinic, P1 | Z = 1 |
a = 7.211 (3) Å | Mo Kα radiation |
b = 8.588 (4) Å | µ = 0.74 mm−1 |
c = 16.515 (7) Å | T = 160 K |
α = 96.00 (2)° | 0.42 × 0.27 × 0.19 mm |
β = 100.79 (2)° | |
Data collection top
Stoe-Siemens four-circle diffractometer | 2889 reflections with I > 2σ(I) |
Absorption correction: ψ scan (XPREP; Sheldrick, 1997) | Rint = 0.020 |
Tmin = 0.821, Tmax = 0.959 | 5 standard reflections every 60 min |
6298 measured reflections | intensity decay: 1% |
3214 independent reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.026 | 0 restraints |
wR(F2) = 0.068 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.33 e Å−3 |
3214 reflections | Δρmin = −0.26 e Å−3 |
251 parameters | |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
Zn | 0.5000 | 0.5000 | 0.5000 | 0.01697 (9) | |
O1 | 0.79004 (19) | 0.50312 (18) | 0.56174 (8) | 0.0227 (3) | |
H1A | 0.813 (4) | 0.570 (3) | 0.6084 (17) | 0.049 (7)* | |
H1B | 0.787 (4) | 0.414 (3) | 0.5760 (14) | 0.039 (7)* | |
N1 | 0.6747 (2) | 0.71783 (17) | 0.45183 (8) | 0.0183 (3) | |
C1 | 0.6537 (3) | 0.8666 (2) | 0.46307 (10) | 0.0201 (3) | |
H1 | 0.5623 | 0.8779 | 0.4956 | 0.024* | |
C2 | 0.7599 (3) | 1.0046 (2) | 0.42920 (11) | 0.0220 (4) | |
H2 | 0.7413 | 1.1083 | 0.4385 | 0.026* | |
C3 | 0.8932 (3) | 0.9895 (2) | 0.38164 (11) | 0.0218 (4) | |
H3 | 0.9659 | 1.0817 | 0.3570 | 0.026* | |
C4 | 0.9188 (2) | 0.8365 (2) | 0.37061 (10) | 0.0182 (3) | |
C5 | 0.8087 (2) | 0.7051 (2) | 0.40749 (10) | 0.0186 (3) | |
H5 | 0.8288 | 0.6018 | 0.4012 | 0.022* | |
C6 | 1.0807 (3) | 0.8142 (2) | 0.33073 (10) | 0.0199 (4) | |
O2 | 1.21846 (19) | 0.78446 (16) | 0.37503 (8) | 0.0270 (3) | |
N2 | 1.0770 (2) | 0.82976 (18) | 0.25073 (9) | 0.0229 (3) | |
C7 | 0.9084 (3) | 0.8481 (2) | 0.19266 (11) | 0.0297 (4) | |
H7A | 0.9675 | 0.9476 | 0.1661 | 0.036* | |
H7B | 0.8163 | 0.8717 | 0.2250 | 0.036* | |
C8 | 0.7817 (4) | 0.6905 (3) | 0.12447 (15) | 0.0529 (6) | |
H8A | 0.6644 | 0.7059 | 0.0911 | 0.079* | |
H8B | 0.7306 | 0.5899 | 0.1503 | 0.079* | |
H8C | 0.8681 | 0.6741 | 0.0880 | 0.079* | |
C9 | 1.2497 (3) | 0.8191 (2) | 0.21772 (12) | 0.0294 (4) | |
H9A | 1.3808 | 0.8874 | 0.2603 | 0.035* | |
H9B | 1.2549 | 0.8712 | 0.1670 | 0.035* | |
C10 | 1.2343 (4) | 0.6371 (3) | 0.19520 (15) | 0.0405 (5) | |
H10A | 1.3550 | 0.6402 | 0.1751 | 0.061* | |
H10B | 1.1084 | 0.5698 | 0.1510 | 0.061* | |
H10C | 1.2295 | 0.5844 | 0.2450 | 0.061* | |
O3 | 0.50606 (18) | 0.33955 (14) | 0.39517 (7) | 0.0205 (3) | |
C11 | 0.3897 (3) | 0.3038 (2) | 0.32227 (10) | 0.0184 (3) | |
O4 | 0.20852 (18) | 0.29485 (15) | 0.30447 (7) | 0.0240 (3) | |
C12 | 0.4800 (3) | 0.2719 (2) | 0.24946 (10) | 0.0191 (3) | |
C13 | 0.6763 (3) | 0.2716 (2) | 0.26350 (11) | 0.0207 (4) | |
H13 | 0.7549 | 0.2913 | 0.3194 | 0.025* | |
C14 | 0.7586 (3) | 0.2426 (2) | 0.19654 (11) | 0.0230 (4) | |
H14 | 0.8922 | 0.2417 | 0.2057 | 0.028* | |
C15 | 0.6390 (3) | 0.2151 (2) | 0.11612 (11) | 0.0232 (4) | |
C16 | 0.4439 (3) | 0.2160 (2) | 0.09983 (11) | 0.0244 (4) | |
H16 | 0.3664 | 0.1974 | 0.0438 | 0.029* | |
C17 | 0.3649 (3) | 0.2446 (2) | 0.16737 (11) | 0.0223 (4) | |
H17 | 0.2314 | 0.2457 | 0.1578 | 0.027* | |
N3 | 0.7240 (2) | 0.1864 (2) | 0.04415 (9) | 0.0288 (4) | |
O5 | 0.8860 (2) | 0.1667 (2) | 0.05764 (9) | 0.0508 (4) | |
O6 | 0.6269 (2) | 0.1804 (2) | −0.02622 (8) | 0.0408 (4) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Zn | 0.01512 (15) | 0.01988 (15) | 0.01763 (15) | 0.00705 (11) | 0.00675 (10) | 0.00605 (10) |
O1 | 0.0206 (7) | 0.0264 (7) | 0.0252 (7) | 0.0128 (5) | 0.0069 (5) | 0.0072 (6) |
N1 | 0.0146 (7) | 0.0212 (7) | 0.0200 (7) | 0.0070 (6) | 0.0058 (6) | 0.0062 (5) |
C1 | 0.0177 (8) | 0.0247 (8) | 0.0211 (8) | 0.0106 (7) | 0.0075 (7) | 0.0049 (7) |
C2 | 0.0221 (9) | 0.0217 (8) | 0.0266 (9) | 0.0122 (7) | 0.0080 (7) | 0.0062 (7) |
C3 | 0.0200 (9) | 0.0220 (8) | 0.0246 (9) | 0.0074 (7) | 0.0079 (7) | 0.0096 (7) |
C4 | 0.0149 (8) | 0.0216 (8) | 0.0180 (8) | 0.0071 (7) | 0.0040 (6) | 0.0051 (6) |
C5 | 0.0173 (8) | 0.0199 (8) | 0.0202 (8) | 0.0085 (7) | 0.0056 (7) | 0.0046 (6) |
C6 | 0.0175 (8) | 0.0176 (8) | 0.0258 (9) | 0.0064 (7) | 0.0080 (7) | 0.0064 (7) |
O2 | 0.0214 (6) | 0.0356 (7) | 0.0317 (7) | 0.0163 (6) | 0.0106 (5) | 0.0132 (6) |
N2 | 0.0256 (8) | 0.0261 (8) | 0.0258 (8) | 0.0148 (6) | 0.0144 (6) | 0.0108 (6) |
C7 | 0.0378 (11) | 0.0367 (10) | 0.0255 (9) | 0.0227 (9) | 0.0121 (8) | 0.0146 (8) |
C8 | 0.0507 (15) | 0.0595 (15) | 0.0454 (13) | 0.0287 (13) | −0.0042 (11) | 0.0016 (11) |
C9 | 0.0346 (11) | 0.0293 (10) | 0.0364 (10) | 0.0162 (8) | 0.0253 (9) | 0.0144 (8) |
C10 | 0.0518 (14) | 0.0359 (11) | 0.0529 (13) | 0.0267 (10) | 0.0336 (11) | 0.0163 (10) |
O3 | 0.0213 (6) | 0.0238 (6) | 0.0182 (6) | 0.0099 (5) | 0.0072 (5) | 0.0044 (5) |
C11 | 0.0203 (9) | 0.0140 (7) | 0.0209 (8) | 0.0050 (6) | 0.0081 (7) | 0.0059 (6) |
O4 | 0.0171 (6) | 0.0303 (7) | 0.0246 (6) | 0.0087 (5) | 0.0073 (5) | 0.0042 (5) |
C12 | 0.0198 (8) | 0.0157 (8) | 0.0214 (8) | 0.0052 (7) | 0.0078 (7) | 0.0044 (6) |
C13 | 0.0199 (9) | 0.0221 (8) | 0.0199 (8) | 0.0087 (7) | 0.0041 (7) | 0.0040 (7) |
C14 | 0.0188 (9) | 0.0258 (9) | 0.0255 (9) | 0.0102 (7) | 0.0063 (7) | 0.0037 (7) |
C15 | 0.0255 (9) | 0.0249 (9) | 0.0214 (9) | 0.0107 (7) | 0.0102 (7) | 0.0035 (7) |
C16 | 0.0236 (9) | 0.0302 (9) | 0.0191 (8) | 0.0118 (8) | 0.0034 (7) | 0.0033 (7) |
C17 | 0.0178 (8) | 0.0256 (9) | 0.0235 (9) | 0.0091 (7) | 0.0045 (7) | 0.0045 (7) |
N3 | 0.0275 (9) | 0.0370 (9) | 0.0237 (8) | 0.0137 (7) | 0.0104 (7) | 0.0032 (7) |
O5 | 0.0353 (9) | 0.0909 (13) | 0.0347 (8) | 0.0367 (9) | 0.0119 (7) | −0.0008 (8) |
O6 | 0.0475 (9) | 0.0642 (10) | 0.0221 (7) | 0.0314 (8) | 0.0146 (6) | 0.0116 (7) |
Geometric parameters (Å, º) top
Zn—O1i | 2.1373 (15) | C8—H8A | 0.980 |
Zn—O1 | 2.1373 (15) | C8—H8B | 0.980 |
Zn—O3i | 2.1149 (14) | C8—H8C | 0.980 |
Zn—O3 | 2.1149 (14) | C9—C10 | 1.525 (3) |
Zn—N1 | 2.1527 (16) | C9—H9A | 0.990 |
Zn—N1i | 2.1527 (16) | C9—H9B | 0.990 |
O1—H1A | 0.86 (3) | C10—H10A | 0.980 |
O1—H1B | 0.81 (3) | C10—H10B | 0.980 |
N1—C1 | 1.340 (2) | C10—H10C | 0.980 |
N1—C5 | 1.345 (2) | C11—O3 | 1.264 (2) |
C1—C2 | 1.386 (2) | C11—O4 | 1.255 (2) |
C1—H1 | 0.950 | C11—C12 | 1.518 (2) |
C2—C3 | 1.383 (2) | C12—C13 | 1.392 (3) |
C2—H2 | 0.950 | C12—C17 | 1.395 (2) |
C3—C4 | 1.392 (2) | C13—C14 | 1.392 (2) |
C3—H3 | 0.950 | C13—H13 | 0.950 |
C4—C5 | 1.387 (2) | C14—C15 | 1.384 (3) |
C4—C6 | 1.504 (2) | C14—H14 | 0.950 |
C5—H5 | 0.950 | C15—C16 | 1.385 (3) |
C6—O2 | 1.243 (2) | C15—N3 | 1.474 (2) |
C6—N2 | 1.338 (2) | C16—C17 | 1.384 (2) |
N2—C7 | 1.470 (2) | C16—H16 | 0.950 |
N2—C9 | 1.479 (2) | C17—H17 | 0.950 |
C7—C8 | 1.517 (3) | N3—O6 | 1.225 (2) |
C7—H7A | 0.990 | N3—O5 | 1.225 (2) |
C7—H7B | 0.990 | | |
| | | |
O3i—Zn—O3 | 180.0 | C8—C7—H7B | 108.9 |
O3i—Zn—O1i | 87.54 (6) | H7A—C7—H7B | 107.8 |
O3—Zn—O1i | 92.46 (6) | C7—C8—H8A | 109.5 |
O3i—Zn—O1 | 92.46 (6) | C7—C8—H8B | 109.5 |
O3—Zn—O1 | 87.54 (6) | H8A—C8—H8B | 109.5 |
O1i—Zn—O1 | 180.0 | C7—C8—H8C | 109.5 |
O3i—Zn—N1 | 91.46 (6) | H8A—C8—H8C | 109.5 |
O3—Zn—N1 | 88.54 (6) | H8B—C8—H8C | 109.5 |
O1i—Zn—N1 | 93.29 (6) | N2—C9—C10 | 114.03 (16) |
O1—Zn—N1 | 86.71 (6) | N2—C9—H9A | 108.7 |
O3i—Zn—N1i | 88.54 (6) | C10—C9—H9A | 108.7 |
O3—Zn—N1i | 91.46 (6) | N2—C9—H9B | 108.7 |
O1i—Zn—N1i | 86.71 (6) | C10—C9—H9B | 108.7 |
O1—Zn—N1i | 93.29 (6) | H9A—C9—H9B | 107.6 |
N1—Zn—N1i | 180.0 | C9—C10—H10A | 109.5 |
Zn—O1—H1A | 99.5 (17) | C9—C10—H10B | 109.5 |
Zn—O1—H1B | 116.0 (17) | H10A—C10—H10B | 109.5 |
H1A—O1—H1B | 103 (2) | C9—C10—H10C | 109.5 |
C1—N1—C5 | 118.01 (14) | H10A—C10—H10C | 109.5 |
C1—N1—Zn | 122.64 (11) | H10B—C10—H10C | 109.5 |
C5—N1—Zn | 119.34 (11) | C11—O3—Zn | 125.41 (11) |
N1—C1—C2 | 122.72 (16) | O4—C11—O3 | 126.30 (15) |
N1—C1—H1 | 118.6 | O4—C11—C12 | 117.12 (15) |
C2—C1—H1 | 118.6 | O3—C11—C12 | 116.58 (15) |
C3—C2—C1 | 119.11 (16) | C13—C12—C17 | 119.74 (16) |
C3—C2—H2 | 120.4 | C13—C12—C11 | 120.96 (15) |
C1—C2—H2 | 120.4 | C17—C12—C11 | 119.29 (16) |
C2—C3—C4 | 118.71 (15) | C14—C13—C12 | 120.75 (16) |
C2—C3—H3 | 120.6 | C14—C13—H13 | 119.6 |
C4—C3—H3 | 120.6 | C12—C13—H13 | 119.6 |
C5—C4—C3 | 118.59 (16) | C15—C14—C13 | 117.69 (17) |
C5—C4—C6 | 117.71 (15) | C15—C14—H14 | 121.2 |
C3—C4—C6 | 123.16 (15) | C13—C14—H14 | 121.2 |
N1—C5—C4 | 122.82 (15) | C14—C15—C16 | 123.11 (16) |
N1—C5—H5 | 118.6 | C14—C15—N3 | 118.69 (16) |
C4—C5—H5 | 118.6 | C16—C15—N3 | 118.18 (16) |
O2—C6—N2 | 121.81 (16) | C17—C16—C15 | 118.22 (16) |
O2—C6—C4 | 117.72 (15) | C17—C16—H16 | 120.9 |
N2—C6—C4 | 120.45 (15) | C15—C16—H16 | 120.9 |
C6—N2—C7 | 124.48 (15) | C16—C17—C12 | 120.48 (17) |
C6—N2—C9 | 117.40 (15) | C16—C17—H17 | 119.8 |
C7—N2—C9 | 118.04 (15) | C12—C17—H17 | 119.8 |
N2—C7—C8 | 113.16 (17) | O6—N3—O5 | 123.39 (16) |
N2—C7—H7A | 108.9 | O6—N3—C15 | 118.20 (16) |
C8—C7—H7A | 108.9 | O5—N3—C15 | 118.39 (15) |
N2—C7—H7B | 108.9 | | |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O4i | 0.86 (3) | 1.82 (3) | 2.659 (2) | 164 (3) |
O1—H1B···O2ii | 0.81 (3) | 1.95 (3) | 2.765 (2) | 173 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+1, −z+1. |
Experimental details
Crystal data |
Chemical formula | [Zn(C7H4NO4)2(C10H14N2O)2(H2O)2] |
Mr | 790.09 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 160 |
a, b, c (Å) | 7.211 (3), 8.588 (4), 16.515 (7) |
α, β, γ (°) | 96.00 (2), 100.79 (2), 112.09 (3) |
V (Å3) | 913.6 (7) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.74 |
Crystal size (mm) | 0.42 × 0.27 × 0.19 |
|
Data collection |
Diffractometer | Stoe-Siemens four-circle diffractometer |
Absorption correction | ψ scan (XPREP; Sheldrick, 1997) |
Tmin, Tmax | 0.821, 0.959 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6298, 3214, 2889 |
Rint | 0.020 |
(sin θ/λ)max (Å−1) | 0.595 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.026, 0.068, 1.10 |
No. of reflections | 3214 |
No. of parameters | 251 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.33, −0.26 |
Selected geometric parameters (Å, º) topZn—O1 | 2.1373 (15) | C11—O3 | 1.264 (2) |
Zn—O3 | 2.1149 (14) | C11—O4 | 1.255 (2) |
Zn—N1 | 2.1527 (16) | | |
| | | |
O3—Zn—O1 | 87.54 (6) | O1—Zn—N1 | 86.71 (6) |
O3—Zn—N1 | 88.54 (6) | C11—O3—Zn | 125.41 (11) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O1—H1A···O4i | 0.86 (3) | 1.82 (3) | 2.659 (2) | 164 (3) |
O1—H1B···O2ii | 0.81 (3) | 1.95 (3) | 2.765 (2) | 173 (2) |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+2, −y+1, −z+1. |
The title compound, (I), was prepared as part of a series of studies of the coordination chemistry of the ligand N,N-diethylnicotinamide (DENA). It has a molecular structure (Fig. 1) very similar to that of the corresponding complex in which 2-hydroxybenzoate (salicylate) replaces 4-nitrobenzoate, reported in a parallel publication (Necefoglu et al., 2001). Coordination of zinc is close to regular octahedral, with all pairs of equivalent ligands mutually trans across a crystallographic inversion centre.
Each aqua ligand is involved as donor in two hydrogen bonds. One of these is intramolecular, to an uncoordinated carboxylate oxygen atom, lengthening the C═O nominal double bond to almost the same as C—O for the coordinated O atom. The other is intermolecular, linking the molecules together in chains along the a axis.