Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536808009264/ng2441sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536808009264/ng2441Isup2.hkl |
CCDC reference: 688926
Key indicators
- Single-crystal X-ray study
- T = 299 K
- Mean (C-C) = 0.014 Å
- Disorder in main residue
- R factor = 0.089
- wR factor = 0.309
- Data-to-parameter ratio = 15.0
checkCIF/PLATON results
No syntax errors found
Alert level A PLAT241_ALERT_2_A Check High Ueq as Compared to Neighbors for Cl2
Author Response: Cl1, Cl2, Cl3 of the CCl~3~ group are disordered and Cl1 and Cl3 have been refined using a split model. For Cl2 no reliable disorder model could be produced. Because of this disorder displacement parameters are unusually high. |
Alert level B PLAT026_ALERT_3_B Ratio Observed / Unique Reflections too Low .... 30 Perc. PLAT230_ALERT_2_B Hirshfeld Test Diff for Cl2 - Cl3B .. 8.07 su PLAT242_ALERT_2_B Check Low Ueq as Compared to Neighbors for C4 PLAT340_ALERT_3_B Low Bond Precision on C-C Bonds (x 1000) Ang ... 14 PLAT431_ALERT_2_B Short Inter HL..A Contact Cl1A .. Cl2 .. 3.07 Ang.
Alert level C RFACR01_ALERT_3_C The value of the weighted R factor is > 0.25 Weighted R factor given 0.308 STRVA01_ALERT_4_C Flack parameter is too small From the CIF: _refine_ls_abs_structure_Flack -0.400 From the CIF: _refine_ls_abs_structure_Flack_su 0.400 PLAT032_ALERT_4_C Std. Uncertainty in Flack Parameter too High ... 0.40 PLAT033_ALERT_2_C Flack Parameter Value Deviates from zero ....... -0.40 PLAT084_ALERT_2_C High R2 Value .................................. 0.31 PLAT230_ALERT_2_C Hirshfeld Test Diff for Cl1A - Cl1B .. 6.51 su PLAT230_ALERT_2_C Hirshfeld Test Diff for Cl2 - C4 .. 6.91 su PLAT230_ALERT_2_C Hirshfeld Test Diff for Cl3A - Cl3B .. 5.93 su PLAT230_ALERT_2_C Hirshfeld Test Diff for N7 - C8 .. 5.81 su PLAT301_ALERT_3_C Main Residue Disorder ......................... 12.00 Perc. PLAT779_ALERT_2_C Suspect or Irrelevant (Bond) Angle in CIF ...... 43.00 Deg. CL3B -C4 -CL3A 1.555 1.555 1.555 PLAT779_ALERT_2_C Suspect or Irrelevant (Bond) Angle in CIF ...... 32.10 Deg. CL1B -C4 -CL1A 1.555 1.555 1.555
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 26.37 From the CIF: _reflns_number_total 2314 Count of symmetry unique reflns 1427 Completeness (_total/calc) 162.16% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 887 Fraction of Friedel pairs measured 0.622 Are heavy atom types Z>Si present yes PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 37
1 ALERT level A = In general: serious problem 5 ALERT level B = Potentially serious problem 12 ALERT level C = Check and explain 2 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 12 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The title compound was prepared according to the literature method (Shilpa and Gowda, 2007). The purity of the compound was checked by determining its melting point. It was characterized by recording its infrared and NMR spectra (Shilpa and Gowda, 2007). Single crystals of the title compound were obtained from an ethanolic solution and used for X-ray diffraction studies at room temperature.
The H atoms were positioned with idealized geometry using a riding model with C—H = 0.93–0.96 Å, N—H = 0.86 Å. All H atoms were refined with isotropic displacement parameters (set to 1.2 times of the Ueq of the parent atom).
The Cl atoms of CCl3 group are disordered and Cl1 and Cl3 were refined using a split model with site-occupation factors 0.5:0.5. No reliable disorder model could be produced for Cl2. The C—Cl distances were restrained to 1.77 (2) Å and the distances in the disordered groups were restrained to be equal.
The compound is a weak anamalous scatterer with minor intensity at high θ value. The low fraction of unique data is above the 2σ level (30°).
Data collection: CrysAlis CCD (Oxford Diffraction, 2004); cell refinement: CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: PLATON (Spek, 2003); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
C10H10Cl3NO | F(000) = 544 |
Mr = 266.54 | Dx = 1.514 Mg m−3 |
Orthorhombic, P212121 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2ac 2ab | Cell parameters from 1061 reflections |
a = 4.9173 (9) Å | θ = 2.6–28.1° |
b = 11.290 (1) Å | µ = 0.76 mm−1 |
c = 21.070 (2) Å | T = 299 K |
V = 1169.7 (3) Å3 | Prism, colourless |
Z = 4 | 0.16 × 0.12 × 0.06 mm |
Oxford Diffraction Xcalibur diffractometer with Sapphire CCD detector | 2314 independent reflections |
Radiation source: Enhance (Mo) X-ray Source | 703 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.071 |
Rotation method data acquisition using ω and phi scans. | θmax = 26.4°, θmin = 3.4° |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | h = −6→6 |
Tmin = 0.889, Tmax = 0.956 | k = −14→13 |
6121 measured reflections | l = −26→23 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.088 | H-atom parameters constrained |
wR(F2) = 0.309 | w = 1/[σ2(Fo2) + (0.1675P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.86 | (Δ/σ)max = 0.003 |
2314 reflections | Δρmax = 0.27 e Å−3 |
154 parameters | Δρmin = −0.76 e Å−3 |
37 restraints | Absolute structure: Flack (1983), 887 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: −0.4 (4) |
C10H10Cl3NO | V = 1169.7 (3) Å3 |
Mr = 266.54 | Z = 4 |
Orthorhombic, P212121 | Mo Kα radiation |
a = 4.9173 (9) Å | µ = 0.76 mm−1 |
b = 11.290 (1) Å | T = 299 K |
c = 21.070 (2) Å | 0.16 × 0.12 × 0.06 mm |
Oxford Diffraction Xcalibur diffractometer with Sapphire CCD detector | 2314 independent reflections |
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007) | 703 reflections with I > 2σ(I) |
Tmin = 0.889, Tmax = 0.956 | Rint = 0.071 |
6121 measured reflections |
R[F2 > 2σ(F2)] = 0.088 | H-atom parameters constrained |
wR(F2) = 0.309 | Δρmax = 0.27 e Å−3 |
S = 0.86 | Δρmin = −0.76 e Å−3 |
2314 reflections | Absolute structure: Flack (1983), 887 Friedel pairs |
154 parameters | Absolute structure parameter: −0.4 (4) |
37 restraints |
Experimental. empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cl1A | 0.4909 (19) | 0.3895 (7) | 0.5055 (3) | 0.096 (2) | 0.50 |
Cl1B | 0.301 (3) | 0.3888 (10) | 0.5125 (4) | 0.139 (4) | 0.50 |
Cl2 | 0.0276 (14) | 0.5253 (7) | 0.5201 (3) | 0.218 (3) | |
Cl3A | 0.459 (2) | 0.6280 (6) | 0.4526 (3) | 0.102 (2) | 0.50 |
Cl3B | 0.226 (2) | 0.6324 (7) | 0.4737 (5) | 0.141 (3) | 0.50 |
O6 | −0.0518 (17) | 0.4448 (7) | 0.3920 (4) | 0.092 (3) | |
N7 | 0.3670 (16) | 0.4054 (7) | 0.3571 (4) | 0.069 (2) | |
H7N | 0.5356 | 0.4163 | 0.3662 | 0.083* | |
C4 | 0.311 (2) | 0.4931 (7) | 0.4592 (4) | 0.082 (3) | |
C5 | 0.180 (3) | 0.4444 (9) | 0.4003 (6) | 0.075 (3) | |
C8 | 0.308 (2) | 0.3488 (8) | 0.2991 (4) | 0.055 (3) | |
C9 | 0.4334 (19) | 0.2416 (9) | 0.2866 (5) | 0.062 (3) | |
C10 | 0.358 (2) | 0.1877 (10) | 0.2267 (5) | 0.079 (3) | |
H10 | 0.4336 | 0.1151 | 0.2154 | 0.095* | |
C11 | 0.178 (2) | 0.2420 (10) | 0.1863 (4) | 0.067 (3) | |
H11 | 0.1371 | 0.2054 | 0.1480 | 0.080* | |
C12 | 0.055 (2) | 0.3486 (10) | 0.2002 (5) | 0.069 (3) | |
C13 | 0.125 (2) | 0.4011 (9) | 0.2572 (4) | 0.062 (3) | |
H13 | 0.0466 | 0.4735 | 0.2679 | 0.074* | |
C14 | 0.624 (2) | 0.1827 (8) | 0.3309 (5) | 0.075 (3) | |
H14A | 0.5312 | 0.1655 | 0.3700 | 0.090* | |
H14B | 0.7750 | 0.2341 | 0.3392 | 0.090* | |
H14C | 0.6878 | 0.1103 | 0.3123 | 0.090* | |
C15 | −0.138 (2) | 0.4037 (11) | 0.1548 (5) | 0.091 (3) | |
H15A | −0.2838 | 0.3497 | 0.1462 | 0.109* | |
H15B | −0.0441 | 0.4218 | 0.1160 | 0.109* | |
H15C | −0.2094 | 0.4753 | 0.1727 | 0.109* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cl1A | 0.116 (6) | 0.109 (5) | 0.063 (3) | 0.023 (5) | 0.000 (4) | −0.003 (3) |
Cl1B | 0.172 (8) | 0.151 (7) | 0.093 (5) | −0.036 (7) | 0.005 (6) | 0.037 (5) |
Cl2 | 0.213 (6) | 0.278 (7) | 0.163 (4) | 0.011 (6) | 0.007 (4) | −0.053 (4) |
Cl3A | 0.135 (6) | 0.086 (4) | 0.086 (4) | −0.038 (4) | 0.016 (4) | −0.025 (3) |
Cl3B | 0.151 (7) | 0.117 (6) | 0.154 (6) | 0.018 (6) | −0.027 (6) | −0.049 (5) |
O6 | 0.052 (4) | 0.127 (7) | 0.099 (5) | 0.011 (5) | −0.007 (4) | −0.040 (5) |
N7 | 0.049 (5) | 0.068 (5) | 0.092 (6) | −0.004 (5) | −0.014 (5) | 0.016 (5) |
C4 | 0.091 (8) | 0.070 (7) | 0.084 (7) | 0.002 (7) | −0.025 (7) | −0.019 (6) |
C5 | 0.056 (7) | 0.081 (8) | 0.088 (7) | 0.011 (7) | −0.018 (7) | −0.019 (6) |
C8 | 0.055 (6) | 0.061 (6) | 0.048 (5) | −0.009 (6) | 0.004 (6) | −0.005 (5) |
C9 | 0.045 (5) | 0.056 (6) | 0.086 (7) | 0.011 (6) | 0.004 (6) | 0.018 (6) |
C10 | 0.079 (8) | 0.064 (7) | 0.095 (8) | −0.004 (7) | 0.000 (7) | −0.012 (6) |
C11 | 0.077 (8) | 0.064 (7) | 0.061 (6) | −0.004 (7) | 0.005 (6) | 0.005 (5) |
C12 | 0.063 (7) | 0.078 (8) | 0.066 (6) | −0.016 (7) | −0.003 (6) | 0.022 (6) |
C13 | 0.062 (6) | 0.062 (5) | 0.062 (6) | 0.006 (6) | −0.005 (6) | 0.010 (5) |
C14 | 0.073 (7) | 0.050 (6) | 0.102 (7) | 0.001 (7) | −0.004 (7) | 0.000 (6) |
C15 | 0.080 (8) | 0.119 (9) | 0.074 (6) | −0.001 (9) | −0.017 (7) | 0.019 (7) |
Cl1A—C4 | 1.761 (11) | C10—C11 | 1.373 (14) |
Cl1B—C4 | 1.628 (11) | C10—H10 | 0.9300 |
Cl2—C4 | 1.931 (10) | C11—C12 | 1.378 (13) |
Cl3A—C4 | 1.693 (10) | C11—H11 | 0.9300 |
Cl3B—C4 | 1.656 (10) | C12—C13 | 1.382 (14) |
O6—C5 | 1.151 (11) | C12—C15 | 1.484 (14) |
N7—C5 | 1.367 (13) | C13—H13 | 0.9300 |
N7—C8 | 1.411 (11) | C14—H14A | 0.9600 |
N7—H7N | 0.8600 | C14—H14B | 0.9600 |
C4—C5 | 1.503 (13) | C14—H14C | 0.9600 |
C8—C9 | 1.383 (12) | C15—H15A | 0.9600 |
C8—C13 | 1.393 (13) | C15—H15B | 0.9600 |
C9—C10 | 1.449 (14) | C15—H15C | 0.9600 |
C9—C14 | 1.480 (12) | ||
C5—N7—C8 | 125.7 (8) | C10—C9—C14 | 121.5 (9) |
C5—N7—H7N | 117.1 | C11—C10—C9 | 121.1 (10) |
C8—N7—H7N | 117.1 | C11—C10—H10 | 119.5 |
C5—C4—Cl1B | 106.9 (8) | C9—C10—H10 | 119.5 |
C5—C4—Cl3B | 113.0 (8) | C10—C11—C12 | 122.8 (10) |
Cl1B—C4—Cl3B | 123.5 (8) | C10—C11—H11 | 118.6 |
C5—C4—Cl3A | 116.5 (7) | C12—C11—H11 | 118.6 |
Cl1B—C4—Cl3A | 136.1 (7) | C11—C12—C13 | 116.8 (9) |
Cl3B—C4—Cl3A | 43.0 (5) | C11—C12—C15 | 120.6 (10) |
C5—C4—Cl1A | 115.4 (7) | C13—C12—C15 | 122.6 (11) |
Cl1B—C4—Cl1A | 32.1 (4) | C12—C13—C8 | 121.9 (9) |
Cl3B—C4—Cl1A | 131.0 (7) | C12—C13—H13 | 119.1 |
Cl3A—C4—Cl1A | 115.4 (7) | C8—C13—H13 | 119.1 |
C5—C4—Cl2 | 107.8 (8) | C9—C14—H14A | 109.5 |
Cl1B—C4—Cl2 | 69.8 (7) | C9—C14—H14B | 109.5 |
Cl3B—C4—Cl2 | 61.1 (6) | H14A—C14—H14B | 109.5 |
Cl3A—C4—Cl2 | 101.2 (5) | C9—C14—H14C | 109.5 |
Cl1A—C4—Cl2 | 96.8 (6) | H14A—C14—H14C | 109.5 |
O6—C5—N7 | 124.5 (10) | H14B—C14—H14C | 109.5 |
O6—C5—C4 | 123.3 (12) | C12—C15—H15A | 109.5 |
N7—C5—C4 | 112.1 (10) | C12—C15—H15B | 109.5 |
C9—C8—C13 | 122.6 (9) | H15A—C15—H15B | 109.5 |
C9—C8—N7 | 118.0 (9) | C12—C15—H15C | 109.5 |
C13—C8—N7 | 119.4 (9) | H15A—C15—H15C | 109.5 |
C8—C9—C10 | 114.8 (9) | H15B—C15—H15C | 109.5 |
C8—C9—C14 | 123.7 (9) | ||
C8—N7—C5—O6 | −7.0 (17) | C13—C8—C9—C10 | −0.2 (13) |
C8—N7—C5—C4 | 176.0 (8) | N7—C8—C9—C10 | 178.7 (9) |
Cl1B—C4—C5—O6 | 84.0 (14) | C13—C8—C9—C14 | −178.4 (9) |
Cl3B—C4—C5—O6 | −55.0 (16) | N7—C8—C9—C14 | 0.6 (13) |
Cl3A—C4—C5—O6 | −102.5 (14) | C8—C9—C10—C11 | 0.6 (14) |
Cl1A—C4—C5—O6 | 117.4 (13) | C14—C9—C10—C11 | 178.8 (9) |
Cl2—C4—C5—O6 | 10.4 (14) | C9—C10—C11—C12 | −1.1 (17) |
Cl1B—C4—C5—N7 | −99.0 (10) | C10—C11—C12—C13 | 1.0 (15) |
Cl3B—C4—C5—N7 | 121.9 (10) | C10—C11—C12—C15 | 179.7 (10) |
Cl3A—C4—C5—N7 | 74.5 (11) | C11—C12—C13—C8 | −0.6 (14) |
Cl1A—C4—C5—N7 | −65.6 (11) | C15—C12—C13—C8 | −179.3 (9) |
Cl2—C4—C5—N7 | −172.6 (7) | C9—C8—C13—C12 | 0.3 (14) |
C5—N7—C8—C9 | −127.3 (10) | N7—C8—C13—C12 | −178.7 (9) |
C5—N7—C8—C13 | 51.7 (12) |
D—H···A | D—H | H···A | D···A | D—H···A |
N7—H7N···O6i | 0.86 | 2.12 | 2.984 (11) | 178 |
Symmetry code: (i) x+1, y, z. |
Experimental details
Crystal data | |
Chemical formula | C10H10Cl3NO |
Mr | 266.54 |
Crystal system, space group | Orthorhombic, P212121 |
Temperature (K) | 299 |
a, b, c (Å) | 4.9173 (9), 11.290 (1), 21.070 (2) |
V (Å3) | 1169.7 (3) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.76 |
Crystal size (mm) | 0.16 × 0.12 × 0.06 |
Data collection | |
Diffractometer | Oxford Diffraction Xcalibur diffractometer with Sapphire CCD detector |
Absorption correction | Multi-scan (CrysAlis RED; Oxford Diffraction, 2007) |
Tmin, Tmax | 0.889, 0.956 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6121, 2314, 703 |
Rint | 0.071 |
(sin θ/λ)max (Å−1) | 0.625 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.088, 0.309, 0.86 |
No. of reflections | 2314 |
No. of parameters | 154 |
No. of restraints | 37 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.27, −0.76 |
Absolute structure | Flack (1983), 887 Friedel pairs |
Absolute structure parameter | −0.4 (4) |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2004), CrysAlis RED (Oxford Diffraction, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N7—H7N···O6i | 0.86 | 2.12 | 2.984 (11) | 177.9 |
Symmetry code: (i) x+1, y, z. |
In the present work, the structure of 2,2,2-trichloro-N- (2,5-dimethylphenyl)acetamide (25DMPTCA) has been determined to study the effect of substituents on the structures of N-aromatic amides (Gowda, Foro et al., 2007; Gowda, Kožíšek et al., 2007). The conformation of the N—H bond in 25DMPTCA is syn to the 2-methyl and anti to the 5-methyl substituents in the aromatic ring (Fig. 1), similar to the syn conformation observed with respect to the 2-methyl substituent in 2,2,2-trichloro-N-(2-methylphenyl)acetamide (2MPTCA) (Gowda, Kožíšek et al., 2007). The bond parameters in 25DMPTCA are similar to those in 2MPTCA, 2,2,2-trichloro-N-(2,6-dimethylphenyl)- acetamide and other acetanilides (Gowda, Foro et al., 2007; Gowda, Kožíšek et al., 2007). The intermolecular N—H···O hydrogen bonds link the molecules into chains (Table 1 and Fig.2). The Cl atoms of CCl3 group are disordered and Cl1 and Cl3 were refined using a split model with site-occupation factors 0.5:0.5. No reliable disorder model could be produced for Cl2.