In the title centrosymmetric dimeric Cd
II complex, [Cd
2(C
7H
5O
4)
4(C
12H
8N
2)
2(H
2O)
2], the Cd
II cation is coordinated by a bidentate phenanthroline (phen) ligand, three dihydroxybenzoate (dhba) anions and one water molecule in a distorted CdN
2O
4 octahedral geometry. Among the dhba anions, two anions bridge two Cd
II cations to form the dimeric complex with significant different Cd—O bond distances of 2.2215 (19) and 2.406 (2) Å. The centroid–centroid distance of 3.4615 (19) Å between two nearly parallel benzene rings of the dhba and phen ligands coordinating to the same Cd
II cation indicates the existence of intramolecular π–π stacking in the complex. Extensive O—H
O hydrogen bonding and intermolecular weak C—H
O hydrogen bonding help to stabilize the crystal structure. One hydroxy group of the monodentate dhba ligand is disordered over two sites with a site-occupancy ratio of 0.9:0.1.
Supporting information
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.004 Å
- Disorder in main residue
- R factor = 0.028
- wR factor = 0.067
- Data-to-parameter ratio = 13.0
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for O1
PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 6
PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 5
Alert level G
PLAT301_ALERT_3_G Note: Main Residue Disorder ................... 3.00 Perc.
PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3
PLAT128_ALERT_4_G Alternate Setting of Space-group P21/c ....... P21/n
0 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
3 ALERT level C = Check and explain
3 ALERT level G = General alerts; check
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
1 ALERT type 2 Indicator that the structure model may be wrong or deficient
3 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
CdCl2.2.5H2O (0.46 g, 2 mmol), Na2CO3 (0.21 g, 2 mmol) and
2,4-dihydroxybenzoic acid (0.31 g, 2 mmol) was dissolved in a water/ethanol
solution (20 ml, 1:3); then phenanthroline (0.36 g, 2 mmol) was added to above
solution. The mixture was refluxed for 3 h, and then filtered after cooling to
room temperature. Colorless single crystals of the title compound were
obtained after one week.
One hydroxy group of C1-containing dhba ligand is disordered, site occupancies
for O3 and O3' atoms were initially refined and converged to 0.895 (3) and
0.105 (3), they were fixed as 0.9 and 0.1 respectively in the final refinement.
Water H atoms were located in a difference Fourier map and refined with O—H
distance restrains, Uiso(H) = 1.2Ueq(O). Other H atoms were
placed in calculated positions with O—H = 0.82 and C—H = 0.93 Å, and
refined in riding mode with Uiso(H) = 1.2Ueq(O,C). In
the final refinement the C6—C7 distance was constrained to be 1.38±0.01 Å.
Data collection: PROCESS-AUTO (Rigaku, 1998); cell refinement: PROCESS-AUTO (Rigaku, 1998); data reduction: CrystalStructure (Rigaku/MSC, 2002); program(s) used to solve structure: SIR92 (Altomare et al., 1993); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX (Farrugia, 1999).
Bis(µ-2,4-dihydroxybenzoato-
κ2O:
O')bis[aqua(2,4-
dihydroxybenzoato-
κO)(1,10-phenanthroline-
κ2N,
N')cadmium(II)]
top
Crystal data top
[Cd2(C7H5O4)4(C12H8N2)2(H2O)2] | F(000) = 1240 |
Mr = 1233.68 | Dx = 1.757 Mg m−3 |
Monoclinic, P21/n | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2yn | Cell parameters from 15860 reflections |
a = 14.899 (4) Å | θ = 3.1–26.0° |
b = 6.874 (2) Å | µ = 1.00 mm−1 |
c = 23.400 (6) Å | T = 296 K |
β = 103.378 (2)° | Prism, colorless |
V = 2331.4 (11) Å3 | 0.26 × 0.17 × 0.11 mm |
Z = 2 | |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 4654 independent reflections |
Radiation source: fine-focus sealed tube | 4015 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.031 |
Detector resolution: 10.0 pixels mm-1 | θmax = 26.1°, θmin = 3.1° |
ω scans | h = −18→18 |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | k = −8→8 |
Tmin = 0.758, Tmax = 0.890 | l = −29→29 |
19273 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.067 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | w = 1/[σ2(Fo2) + (0.0281P)2 + 1.5199P] where P = (Fo2 + 2Fc2)/3 |
4654 reflections | (Δ/σ)max = 0.001 |
358 parameters | Δρmax = 0.66 e Å−3 |
3 restraints | Δρmin = −0.38 e Å−3 |
Crystal data top
[Cd2(C7H5O4)4(C12H8N2)2(H2O)2] | V = 2331.4 (11) Å3 |
Mr = 1233.68 | Z = 2 |
Monoclinic, P21/n | Mo Kα radiation |
a = 14.899 (4) Å | µ = 1.00 mm−1 |
b = 6.874 (2) Å | T = 296 K |
c = 23.400 (6) Å | 0.26 × 0.17 × 0.11 mm |
β = 103.378 (2)° | |
Data collection top
Rigaku R-AXIS RAPID diffractometer | 4654 independent reflections |
Absorption correction: multi-scan (ABSCOR; Higashi, 1995) | 4015 reflections with I > 2σ(I) |
Tmin = 0.758, Tmax = 0.890 | Rint = 0.031 |
19273 measured reflections | |
Refinement top
R[F2 > 2σ(F2)] = 0.028 | 3 restraints |
wR(F2) = 0.067 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.11 | Δρmax = 0.66 e Å−3 |
4654 reflections | Δρmin = −0.38 e Å−3 |
358 parameters | |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
Cd | 0.397190 (12) | 0.67327 (3) | 0.425111 (8) | 0.03048 (7) | |
N1 | 0.37208 (16) | 0.6779 (3) | 0.32325 (9) | 0.0369 (5) | |
N2 | 0.53505 (15) | 0.7623 (3) | 0.40192 (9) | 0.0329 (5) | |
O1 | 0.25877 (13) | 0.5555 (3) | 0.42507 (10) | 0.0534 (6) | |
O2 | 0.16636 (15) | 0.8085 (3) | 0.39648 (12) | 0.0592 (6) | |
O3 | −0.00646 (15) | 0.7698 (3) | 0.38480 (10) | 0.0421 (5) | 0.90 |
H3A | 0.0419 | 0.8218 | 0.3821 | 0.063* | 0.90 |
O3' | 0.2006 (13) | 0.254 (3) | 0.4445 (9) | 0.040 (4) | 0.10 |
H3B | 0.2343 | 0.3426 | 0.4388 | 0.060* | 0.10 |
O4 | −0.11493 (14) | 0.1736 (3) | 0.44782 (11) | 0.0531 (5) | |
H4A | −0.1643 | 0.2313 | 0.4387 | 0.080* | |
O5 | 0.44142 (12) | 0.3360 (3) | 0.43181 (8) | 0.0376 (4) | |
O6 | 0.58823 (14) | 0.2947 (3) | 0.47871 (8) | 0.0465 (5) | |
O7 | 0.71417 (12) | 0.3368 (3) | 0.42386 (8) | 0.0453 (5) | |
H7A | 0.6910 | 0.3342 | 0.4524 | 0.068* | |
O8 | 0.63878 (16) | 0.2938 (4) | 0.21875 (9) | 0.0554 (6) | |
H8A | 0.5953 | 0.2774 | 0.1905 | 0.083* | |
O9 | 0.33412 (15) | 0.9899 (3) | 0.41432 (12) | 0.0584 (6) | |
H9A | 0.2763 (6) | 0.977 (6) | 0.4129 (16) | 0.070* | |
H9B | 0.353 (3) | 1.1085 (18) | 0.4142 (16) | 0.070* | |
C1 | 0.18095 (18) | 0.6359 (5) | 0.41415 (12) | 0.0408 (7) | |
C2 | 0.10138 (17) | 0.5164 (4) | 0.42243 (10) | 0.0324 (5) | |
C3 | 0.01181 (18) | 0.5888 (4) | 0.40876 (11) | 0.0330 (6) | |
H3 | 0.0011 | 0.7142 | 0.3939 | 0.040* | 0.10 |
C4 | −0.06174 (17) | 0.4778 (4) | 0.41683 (11) | 0.0350 (6) | |
H4 | −0.1212 | 0.5289 | 0.4077 | 0.042* | |
C5 | −0.04658 (18) | 0.2906 (4) | 0.43854 (12) | 0.0349 (6) | |
C6 | 0.04272 (16) | 0.2132 (4) | 0.45253 (13) | 0.0386 (6) | |
H6 | 0.0532 | 0.0874 | 0.4672 | 0.046* | |
C7 | 0.11485 (15) | 0.3269 (4) | 0.44412 (11) | 0.0366 (6) | |
H7 | 0.1742 | 0.2758 | 0.4532 | 0.044* | 0.90 |
C8 | 0.52452 (18) | 0.3071 (4) | 0.43170 (11) | 0.0314 (5) | |
C9 | 0.55409 (17) | 0.2915 (3) | 0.37581 (11) | 0.0295 (5) | |
C10 | 0.64719 (18) | 0.3133 (4) | 0.37392 (11) | 0.0338 (5) | |
C11 | 0.67359 (19) | 0.3138 (4) | 0.32113 (12) | 0.0412 (6) | |
H11 | 0.7354 | 0.3295 | 0.3206 | 0.049* | |
C12 | 0.6079 (2) | 0.2908 (4) | 0.26885 (12) | 0.0384 (6) | |
C13 | 0.5157 (2) | 0.2642 (4) | 0.26956 (12) | 0.0378 (6) | |
H13 | 0.4717 | 0.2452 | 0.2347 | 0.045* | |
C14 | 0.49017 (18) | 0.2662 (4) | 0.32251 (12) | 0.0343 (6) | |
H14 | 0.4283 | 0.2501 | 0.3227 | 0.041* | |
C15 | 0.2934 (2) | 0.6307 (5) | 0.28578 (13) | 0.0469 (7) | |
H15 | 0.2427 | 0.5985 | 0.3007 | 0.056* | |
C16 | 0.2839 (3) | 0.6274 (5) | 0.22552 (14) | 0.0568 (9) | |
H16 | 0.2281 | 0.5924 | 0.2006 | 0.068* | |
C17 | 0.3582 (3) | 0.6768 (5) | 0.20315 (13) | 0.0541 (8) | |
H17 | 0.3529 | 0.6768 | 0.1628 | 0.065* | |
C18 | 0.4424 (2) | 0.7273 (4) | 0.24132 (12) | 0.0425 (7) | |
C19 | 0.5236 (3) | 0.7702 (5) | 0.22142 (14) | 0.0523 (8) | |
H19 | 0.5212 | 0.7717 | 0.1813 | 0.063* | |
C20 | 0.6036 (3) | 0.8083 (5) | 0.25983 (15) | 0.0525 (8) | |
H20 | 0.6557 | 0.8362 | 0.2458 | 0.063* | |
C21 | 0.6106 (2) | 0.8070 (4) | 0.32217 (13) | 0.0404 (6) | |
C22 | 0.6939 (2) | 0.8440 (5) | 0.36345 (15) | 0.0512 (8) | |
H22 | 0.7474 | 0.8713 | 0.3509 | 0.061* | |
C23 | 0.6955 (2) | 0.8396 (5) | 0.42162 (15) | 0.0502 (8) | |
H23 | 0.7498 | 0.8653 | 0.4493 | 0.060* | |
C24 | 0.6148 (2) | 0.7962 (4) | 0.43937 (13) | 0.0420 (7) | |
H24 | 0.6170 | 0.7908 | 0.4794 | 0.050* | |
C25 | 0.53247 (19) | 0.7677 (4) | 0.34348 (11) | 0.0325 (6) | |
C26 | 0.4460 (2) | 0.7251 (4) | 0.30205 (11) | 0.0337 (6) | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
Cd | 0.02787 (10) | 0.03859 (11) | 0.02644 (10) | −0.00149 (8) | 0.00929 (7) | 0.00251 (8) |
N1 | 0.0418 (12) | 0.0401 (12) | 0.0289 (11) | −0.0037 (11) | 0.0084 (9) | −0.0006 (10) |
N2 | 0.0353 (12) | 0.0348 (11) | 0.0296 (11) | −0.0047 (9) | 0.0100 (9) | 0.0011 (9) |
O1 | 0.0253 (10) | 0.0670 (14) | 0.0680 (14) | −0.0048 (10) | 0.0112 (9) | 0.0102 (12) |
O2 | 0.0403 (12) | 0.0583 (14) | 0.0801 (16) | −0.0100 (10) | 0.0161 (11) | 0.0206 (13) |
O3 | 0.0364 (12) | 0.0399 (12) | 0.0486 (13) | −0.0017 (9) | 0.0067 (10) | 0.0083 (10) |
O3' | 0.029 (9) | 0.031 (9) | 0.064 (13) | 0.004 (8) | 0.016 (9) | 0.006 (9) |
O4 | 0.0311 (10) | 0.0518 (12) | 0.0791 (15) | −0.0038 (9) | 0.0182 (10) | 0.0162 (12) |
O5 | 0.0328 (10) | 0.0374 (10) | 0.0479 (11) | −0.0010 (8) | 0.0202 (8) | 0.0007 (9) |
O6 | 0.0390 (11) | 0.0724 (15) | 0.0296 (10) | 0.0036 (10) | 0.0107 (8) | −0.0020 (10) |
O7 | 0.0266 (9) | 0.0754 (14) | 0.0338 (10) | −0.0018 (10) | 0.0067 (8) | −0.0044 (10) |
O8 | 0.0514 (13) | 0.0872 (17) | 0.0321 (10) | −0.0028 (12) | 0.0187 (9) | −0.0037 (11) |
O9 | 0.0403 (12) | 0.0381 (11) | 0.0909 (17) | −0.0028 (10) | 0.0029 (12) | 0.0015 (12) |
C1 | 0.0298 (14) | 0.0571 (19) | 0.0354 (14) | −0.0078 (13) | 0.0073 (11) | 0.0004 (13) |
C2 | 0.0264 (12) | 0.0460 (15) | 0.0249 (11) | −0.0032 (11) | 0.0062 (10) | −0.0005 (11) |
C3 | 0.0326 (13) | 0.0366 (13) | 0.0290 (12) | 0.0004 (11) | 0.0054 (10) | 0.0004 (11) |
C4 | 0.0230 (12) | 0.0472 (16) | 0.0351 (13) | 0.0031 (11) | 0.0077 (10) | 0.0008 (12) |
C5 | 0.0297 (13) | 0.0415 (15) | 0.0352 (13) | −0.0050 (11) | 0.0112 (11) | −0.0012 (12) |
C6 | 0.0342 (14) | 0.0377 (16) | 0.0445 (15) | 0.0029 (11) | 0.0103 (12) | 0.0067 (12) |
C7 | 0.0238 (12) | 0.0508 (16) | 0.0348 (13) | 0.0049 (12) | 0.0057 (10) | 0.0010 (13) |
C8 | 0.0352 (14) | 0.0268 (12) | 0.0344 (13) | −0.0023 (11) | 0.0127 (11) | 0.0006 (10) |
C9 | 0.0302 (13) | 0.0291 (13) | 0.0303 (12) | 0.0017 (10) | 0.0095 (10) | 0.0008 (10) |
C10 | 0.0299 (13) | 0.0385 (14) | 0.0329 (13) | −0.0012 (11) | 0.0073 (10) | 0.0013 (11) |
C11 | 0.0332 (14) | 0.0554 (17) | 0.0382 (14) | −0.0019 (13) | 0.0151 (12) | −0.0014 (13) |
C12 | 0.0438 (16) | 0.0425 (16) | 0.0328 (14) | 0.0027 (12) | 0.0166 (12) | 0.0010 (12) |
C13 | 0.0397 (15) | 0.0419 (15) | 0.0291 (13) | 0.0041 (12) | 0.0026 (11) | −0.0043 (12) |
C14 | 0.0290 (13) | 0.0365 (14) | 0.0367 (14) | 0.0006 (11) | 0.0061 (11) | −0.0024 (11) |
C15 | 0.0464 (17) | 0.0512 (18) | 0.0398 (15) | −0.0067 (14) | 0.0027 (13) | −0.0059 (14) |
C16 | 0.061 (2) | 0.063 (2) | 0.0383 (16) | −0.0058 (17) | −0.0045 (15) | −0.0064 (15) |
C17 | 0.081 (2) | 0.0488 (17) | 0.0279 (14) | 0.0025 (17) | 0.0036 (15) | −0.0025 (13) |
C18 | 0.069 (2) | 0.0309 (14) | 0.0298 (14) | 0.0020 (13) | 0.0174 (14) | 0.0001 (11) |
C19 | 0.083 (3) | 0.0474 (18) | 0.0335 (15) | 0.0018 (17) | 0.0284 (16) | 0.0039 (13) |
C20 | 0.068 (2) | 0.0501 (18) | 0.0532 (19) | 0.0054 (16) | 0.0422 (18) | 0.0091 (15) |
C21 | 0.0474 (16) | 0.0354 (14) | 0.0449 (16) | 0.0050 (13) | 0.0239 (13) | 0.0077 (12) |
C22 | 0.0439 (17) | 0.0514 (18) | 0.065 (2) | 0.0025 (14) | 0.0273 (15) | 0.0150 (16) |
C23 | 0.0346 (15) | 0.0570 (19) | 0.0565 (19) | −0.0060 (14) | 0.0057 (13) | 0.0112 (16) |
C24 | 0.0410 (15) | 0.0470 (17) | 0.0367 (14) | −0.0058 (13) | 0.0063 (12) | 0.0069 (13) |
C25 | 0.0439 (15) | 0.0260 (12) | 0.0311 (13) | 0.0001 (11) | 0.0162 (12) | 0.0037 (10) |
C26 | 0.0464 (16) | 0.0259 (13) | 0.0295 (13) | 0.0000 (11) | 0.0100 (11) | 0.0012 (10) |
Geometric parameters (Å, º) top
Cd—N1 | 2.326 (2) | C5—C6 | 1.400 (4) |
Cd—N2 | 2.324 (2) | C6—C7 | 1.379 (4) |
Cd—O1 | 2.215 (2) | C6—H6 | 0.9300 |
Cd—O5 | 2.406 (2) | C7—H7 | 0.9300 |
Cd—O6i | 2.2215 (19) | C8—C9 | 1.477 (3) |
Cd—O9 | 2.361 (2) | C9—C14 | 1.394 (4) |
N1—C15 | 1.331 (4) | C9—C10 | 1.406 (4) |
N1—C26 | 1.348 (4) | C10—C11 | 1.380 (4) |
N2—C24 | 1.324 (3) | C11—C12 | 1.388 (4) |
N2—C25 | 1.360 (3) | C11—H11 | 0.9300 |
O1—C1 | 1.256 (3) | C12—C13 | 1.390 (4) |
O2—C1 | 1.258 (4) | C13—C14 | 1.378 (4) |
O3—C3 | 1.366 (3) | C13—H13 | 0.9300 |
O3—H3A | 0.8200 | C14—H14 | 0.9300 |
O3'—C7 | 1.370 (18) | C15—C16 | 1.384 (4) |
O3'—H3B | 0.8200 | C15—H15 | 0.9300 |
O4—C5 | 1.354 (3) | C16—C17 | 1.373 (5) |
O4—H4A | 0.8200 | C16—H16 | 0.9300 |
O5—C8 | 1.254 (3) | C17—C18 | 1.404 (5) |
O6—C8 | 1.279 (3) | C17—H17 | 0.9300 |
O6—Cdi | 2.222 (2) | C18—C26 | 1.410 (4) |
O7—C10 | 1.359 (3) | C18—C19 | 1.425 (5) |
O7—H7A | 0.8200 | C19—C20 | 1.342 (5) |
O8—C12 | 1.355 (3) | C19—H19 | 0.9300 |
O8—H8A | 0.8200 | C20—C21 | 1.438 (4) |
O9—H9A | 0.860 (11) | C20—H20 | 0.9300 |
O9—H9B | 0.862 (14) | C21—C25 | 1.395 (4) |
C1—C2 | 1.491 (4) | C21—C22 | 1.407 (4) |
C2—C3 | 1.390 (4) | C22—C23 | 1.356 (5) |
C2—C7 | 1.395 (4) | C22—H22 | 0.9300 |
C3—C4 | 1.384 (4) | C23—C24 | 1.392 (4) |
C3—H3 | 0.9300 | C23—H23 | 0.9300 |
C4—C5 | 1.382 (4) | C24—H24 | 0.9300 |
C4—H4 | 0.9300 | C25—C26 | 1.452 (4) |
| | | |
O1—Cd—O6i | 84.81 (8) | O5—C8—O6 | 123.0 (2) |
O1—Cd—N2 | 165.66 (8) | O5—C8—C9 | 120.7 (2) |
O6i—Cd—N2 | 109.02 (8) | O6—C8—C9 | 116.3 (2) |
O1—Cd—N1 | 94.34 (8) | C14—C9—C10 | 117.4 (2) |
O6i—Cd—N1 | 172.63 (8) | C14—C9—C8 | 121.3 (2) |
N2—Cd—N1 | 72.45 (8) | C10—C9—C8 | 121.2 (2) |
O1—Cd—O9 | 89.40 (8) | O7—C10—C11 | 117.7 (2) |
O6i—Cd—O9 | 87.72 (9) | O7—C10—C9 | 121.3 (2) |
N2—Cd—O9 | 94.81 (8) | C11—C10—C9 | 121.1 (2) |
N1—Cd—O9 | 84.96 (9) | C10—C11—C12 | 120.0 (3) |
O1—Cd—O5 | 83.61 (8) | C10—C11—H11 | 120.0 |
O6i—Cd—O5 | 93.93 (7) | C12—C11—H11 | 120.0 |
N2—Cd—O5 | 91.45 (7) | O8—C12—C11 | 116.7 (3) |
N1—Cd—O5 | 93.25 (7) | O8—C12—C13 | 123.1 (3) |
O9—Cd—O5 | 172.64 (7) | C11—C12—C13 | 120.1 (2) |
C15—N1—C26 | 119.1 (2) | C14—C13—C12 | 119.2 (2) |
C15—N1—Cd | 125.4 (2) | C14—C13—H13 | 120.4 |
C26—N1—Cd | 115.42 (17) | C12—C13—H13 | 120.4 |
C24—N2—C25 | 118.2 (2) | C13—C14—C9 | 122.2 (2) |
C24—N2—Cd | 126.73 (18) | C13—C14—H14 | 118.9 |
C25—N2—Cd | 114.91 (17) | C9—C14—H14 | 118.9 |
C1—O1—Cd | 130.9 (2) | N1—C15—C16 | 122.8 (3) |
C3—O3—H3A | 109.5 | N1—C15—H15 | 118.6 |
C7—O3'—H3B | 109.5 | C16—C15—H15 | 118.6 |
C5—O4—H4A | 109.5 | C17—C16—C15 | 118.9 (3) |
C8—O5—Cd | 114.07 (16) | C17—C16—H16 | 120.6 |
C8—O6—Cdi | 138.08 (18) | C15—C16—H16 | 120.6 |
C10—O7—H7A | 109.5 | C16—C17—C18 | 119.9 (3) |
C12—O8—H8A | 109.5 | C16—C17—H17 | 120.0 |
Cd—O9—H9A | 106 (3) | C18—C17—H17 | 120.0 |
Cd—O9—H9B | 139 (3) | C17—C18—C26 | 117.3 (3) |
H9A—O9—H9B | 115 (4) | C17—C18—C19 | 123.0 (3) |
O1—C1—O2 | 124.3 (3) | C26—C18—C19 | 119.6 (3) |
O1—C1—C2 | 117.0 (3) | C20—C19—C18 | 120.8 (3) |
O2—C1—C2 | 118.7 (3) | C20—C19—H19 | 119.6 |
C3—C2—C7 | 117.9 (2) | C18—C19—H19 | 119.6 |
C3—C2—C1 | 121.5 (3) | C19—C20—C21 | 121.5 (3) |
C7—C2—C1 | 120.7 (2) | C19—C20—H20 | 119.2 |
O3—C3—C4 | 118.0 (2) | C21—C20—H20 | 119.2 |
O3—C3—C2 | 120.7 (2) | C25—C21—C22 | 117.7 (3) |
C4—C3—C2 | 121.3 (2) | C25—C21—C20 | 119.5 (3) |
C4—C3—H3 | 119.3 | C22—C21—C20 | 122.7 (3) |
C2—C3—H3 | 119.3 | C23—C22—C21 | 119.5 (3) |
C5—C4—C3 | 119.7 (2) | C23—C22—H22 | 120.2 |
C5—C4—H4 | 120.1 | C21—C22—H22 | 120.2 |
C3—C4—H4 | 120.1 | C22—C23—C24 | 119.2 (3) |
O4—C5—C4 | 123.1 (2) | C22—C23—H23 | 120.4 |
O4—C5—C6 | 116.5 (2) | C24—C23—H23 | 120.4 |
C4—C5—C6 | 120.4 (2) | N2—C24—C23 | 123.0 (3) |
C7—C6—C5 | 118.7 (2) | N2—C24—H24 | 118.5 |
C7—C6—H6 | 120.6 | C23—C24—H24 | 118.5 |
C5—C6—H6 | 120.6 | N2—C25—C21 | 122.2 (3) |
O3'—C7—C6 | 123.2 (8) | N2—C25—C26 | 118.7 (2) |
O3'—C7—C2 | 113.5 (8) | C21—C25—C26 | 119.1 (2) |
C6—C7—C2 | 122.0 (2) | N1—C26—C18 | 122.0 (3) |
C6—C7—H7 | 119.0 | N1—C26—C25 | 118.5 (2) |
C2—C7—H7 | 119.0 | C18—C26—C25 | 119.5 (3) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3A···O2 | 0.82 | 1.81 | 2.540 (3) | 148 |
O3′—H3B···O1 | 0.82 | 1.56 | 2.332 (19) | 156 |
O4—H4A···O7ii | 0.82 | 1.91 | 2.719 (3) | 172 |
O7—H7A···O6 | 0.82 | 1.80 | 2.523 (3) | 147 |
O8—H8A···O3iii | 0.82 | 1.94 | 2.752 (3) | 169 |
O9—H9A···O2 | 0.86 (1) | 1.97 (2) | 2.738 (3) | 148 (3) |
O9—H9B···O5iv | 0.86 (1) | 2.03 (2) | 2.842 (3) | 158 (3) |
C24—H24···O5i | 0.93 | 2.58 | 3.433 (4) | 152 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x, y+1, z. |
Experimental details
Crystal data |
Chemical formula | [Cd2(C7H5O4)4(C12H8N2)2(H2O)2] |
Mr | 1233.68 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 14.899 (4), 6.874 (2), 23.400 (6) |
β (°) | 103.378 (2) |
V (Å3) | 2331.4 (11) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.00 |
Crystal size (mm) | 0.26 × 0.17 × 0.11 |
|
Data collection |
Diffractometer | Rigaku R-AXIS RAPID diffractometer |
Absorption correction | Multi-scan (ABSCOR; Higashi, 1995) |
Tmin, Tmax | 0.758, 0.890 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 19273, 4654, 4015 |
Rint | 0.031 |
(sin θ/λ)max (Å−1) | 0.619 |
|
Refinement |
R[F2 > 2σ(F2)], wR(F2), S | 0.028, 0.067, 1.11 |
No. of reflections | 4654 |
No. of parameters | 358 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.66, −0.38 |
Selected bond lengths (Å) topCd—N1 | 2.326 (2) | Cd—O5 | 2.406 (2) |
Cd—N2 | 2.324 (2) | Cd—O6i | 2.2215 (19) |
Cd—O1 | 2.215 (2) | Cd—O9 | 2.361 (2) |
Symmetry code: (i) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H3A···O2 | 0.82 | 1.81 | 2.540 (3) | 148 |
O3'—H3B···O1 | 0.82 | 1.56 | 2.332 (19) | 156 |
O4—H4A···O7ii | 0.82 | 1.91 | 2.719 (3) | 172 |
O7—H7A···O6 | 0.82 | 1.80 | 2.523 (3) | 147 |
O8—H8A···O3iii | 0.82 | 1.94 | 2.752 (3) | 169 |
O9—H9A···O2 | 0.860 (11) | 1.969 (19) | 2.738 (3) | 148 (3) |
O9—H9B···O5iv | 0.862 (14) | 2.03 (2) | 2.842 (3) | 158 (3) |
C24—H24···O5i | 0.93 | 2.58 | 3.433 (4) | 152 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) x−1, y, z; (iii) −x+1/2, y−1/2, −z+1/2; (iv) x, y+1, z. |
The π-π stacking between aromatic rings is an important non-covalent interaction and correlated with the electron transfer process in some biological systems (Deisenhofer & Michel, 1989). As a continuous work of the series investigation on the nature of π-π stacking (Li et al., 2005), we prepared the title CdII complex which contains a double-hydroxy substituted benzoate ligand. We present here its crystal structure to compare with those incorporating monohydroxybenzoate ligand and to show the effect of hydroxy substitution on the benzene ring to π-π stacking between aromatic rings.
The molecular structure of the title compound is shown in Fig. 1. The dimeric CdII complex locates across on an inversion center. Each CdII atom is coordinated by one phenanthroline (phen), one water molecule and three dihydroxybenzoate (dhba) dianions in a distorted octahedral geometry (Table 1). The C1-containg dhba is monodentately coordinated to a CdII atom and is well coplanar with the Cd atom [the maximum atomic deviation 0.071 (3) Å (Cd)] while the C8-conating dhba bridges two Cd atoms to form the dimeric complex.
It is notable that intra-molecular π-π stacking exists in the dimeric complex. Partially overlapped arrangement between nearly parallel C9-containg benzene ring and phen ring system [dihedral angle 6.56°] is observed in the molecular structure; the shorter centroids distance of 3.4615 (19) Å between C9-benzene and C19-benzene rings suggests the existence of intramolecualr π-π stacking. The perpendicular distance of centroid of C9-benzene ring on C19-benzene ring and perpendicular distance of centroid of C19-benzene ring on C9-benzene ring are 3.365 and 3.388 Å. Intra-molecular π-π stacking was previously observed in a SrII complex with hydroxybenzoate ligand (Su et al., 2007). π-π stacking involving dhba ligand in a NiII complex was reported by Yang et al. (2006).
Intermolecular π-π stacking is also present in the crystal structure; the centroid distance between C9-ring and C19i-ring is 3.754 (2) Å [symmetry code: (i) x, -1 + y, z] (Fig. 2).
Extensive O—H···O hydrogen bonding and intermolecular weak C—H···O hydrogen bonding (Table 2) help to stabilize the crystal structure.