Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536803008924/ob6239sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536803008924/ob6239Isup2.hkl |
CCDC reference: 214636
The title compound, (I), was synthesized from commercially available 1,14-tetradecanedioic acid (Tokyo Kasei Kogyo Co. Ltd) by esterification, reduction, and bromination. The pure compound was obtained through fractional distillation and recrystallization. The single-crystal of (I) used for the X-ray analysis was grown by slow evaporation from a solution containing a mixture of n-heptane and 2-propanol (1:3).
All H atoms were located at idealized positions (C—H = 0.95 Å). The H-atom isotropic displacement parameters were set to be 1.2 Ueq of the parent C atom.
Data collection: MSC/AFC Diffractometer Control Software Molecular Structure Corporation, 1992); cell refinement: MSC/AFC Diffractometer Control Software; data reduction: CrystalStructure (Molecular Structure Corporation & Rigaku, 2001); program(s) used to solve structure: SIR92 (Altomare et al., 1994); program(s) used to refine structure: CRYSTALS (Watkin et al., 1996); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: CrystalStructure.
C14H28Br2 | F(000) = 364.00 |
Mr = 356.16 | Dx = 1.440 Mg m−3 |
Monoclinic, P21/n | Melting point: 322.9(4) K |
Hall symbol: -P 2yn | Cu Kα radiation, λ = 1.54178 Å |
a = 5.486 (6) Å | Cell parameters from 22 reflections |
b = 5.389 (7) Å | θ = 9.6–19.9° |
c = 27.827 (4) Å | µ = 6.06 mm−1 |
β = 93.38 (4)° | T = 296 K |
V = 821.2 (14) Å3 | Plate, colorless |
Z = 2 | 0.43 × 0.43 × 0.08 mm |
Rigaku AFC-5R diffractometer | Rint = 0.038 |
ω scans | θmax = 70.1° |
Absorption correction: numerical (NUMABS; Higashi, 1999) | h = −6→1 |
Tmin = 0.208, Tmax = 0.782 | k = 0→6 |
2304 measured reflections | l = −33→33 |
1563 independent reflections | 1 standard reflections every 150 reflections |
1305 reflections with F2 > 2σ(F2) | intensity decay: 2.8% |
Refinement on F2 | w = 1/[0.0002Fo2 + 8.4σ2(Fo) + 0.21]/(4Fo2) |
R[F2 > 2σ(F2)] = 0.043 | (Δ/σ)max < 0.001 |
wR(F2) = 0.099 | Δρmax = 0.54 e Å−3 |
S = 1.00 | Δρmin = −0.55 e Å−3 |
1563 reflections | Extinction correction: Larson (1970) |
74 parameters | Extinction coefficient: 24.8 (2) |
H-atom parameters not refined |
C14H28Br2 | V = 821.2 (14) Å3 |
Mr = 356.16 | Z = 2 |
Monoclinic, P21/n | Cu Kα radiation |
a = 5.486 (6) Å | µ = 6.06 mm−1 |
b = 5.389 (7) Å | T = 296 K |
c = 27.827 (4) Å | 0.43 × 0.43 × 0.08 mm |
β = 93.38 (4)° |
Rigaku AFC-5R diffractometer | 1305 reflections with F2 > 2σ(F2) |
Absorption correction: numerical (NUMABS; Higashi, 1999) | Rint = 0.038 |
Tmin = 0.208, Tmax = 0.782 | 1 standard reflections every 150 reflections |
2304 measured reflections | intensity decay: 2.8% |
1563 independent reflections |
R[F2 > 2σ(F2)] = 0.043 | 74 parameters |
wR(F2) = 0.099 | H-atom parameters not refined |
S = 1.00 | Δρmax = 0.54 e Å−3 |
1563 reflections | Δρmin = −0.55 e Å−3 |
Refinement. Refinement using reflections with F2 > −3.0 σ(F2). The weighted R-factor (wR) and goodness of fit (S) are based on F2. R-factor (gt) are based on F. The threshold expression of F2 > 2.0 σ(F2) is used only for calculating R-factor (gt). |
x | y | z | Uiso*/Ueq | ||
Br1 | −0.1134 (1) | 0.8399 (1) | 0.21295 (2) | 0.0779 (2) | |
C1 | 0.0619 (9) | 0.5449 (9) | 0.1940 (2) | 0.072 (1) | |
C2 | 0.2116 (8) | 0.5888 (9) | 0.1518 (2) | 0.066 (1) | |
C3 | 0.3428 (9) | 0.3564 (8) | 0.1376 (1) | 0.066 (1) | |
C4 | 0.4975 (8) | 0.3954 (8) | 0.0945 (1) | 0.065 (1) | |
C5 | 0.6325 (8) | 0.1670 (8) | 0.0796 (1) | 0.063 (1) | |
C6 | 0.7857 (8) | 0.2070 (8) | 0.0365 (1) | 0.065 (1) | |
C7 | 0.9241 (8) | −0.0196 (9) | 0.0214 (1) | 0.064 (1) | |
H1 | 0.1669 | 0.4926 | 0.2204 | 0.0868* | |
H2 | −0.0534 | 0.4178 | 0.1860 | 0.0868* | |
H3 | 0.1075 | 0.6427 | 0.1254 | 0.0788* | |
H4 | 0.3289 | 0.7140 | 0.1599 | 0.0788* | |
H5 | 0.4462 | 0.3029 | 0.1642 | 0.0786* | |
H6 | 0.2248 | 0.2316 | 0.1297 | 0.0786* | |
H7 | 0.3933 | 0.4483 | 0.0681 | 0.0777* | |
H8 | 0.6141 | 0.5214 | 0.1025 | 0.0777* | |
H9 | 0.7374 | 0.1145 | 0.1060 | 0.0759* | |
H10 | 0.5162 | 0.0407 | 0.0717 | 0.0759* | |
H11 | 0.6802 | 0.2580 | 0.0100 | 0.0783* | |
H12 | 0.9006 | 0.3348 | 0.0443 | 0.0783* | |
H13 | 1.0299 | −0.0704 | 0.0479 | 0.0771* | |
H14 | 0.8093 | −0.1476 | 0.0137 | 0.0771* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Br1 | 0.0904 (5) | 0.0653 (3) | 0.0810 (4) | 0.0090 (3) | 0.0306 (3) | −0.0013 (3) |
C1 | 0.086 (3) | 0.062 (3) | 0.072 (3) | 0.012 (2) | 0.026 (3) | 0.005 (2) |
C2 | 0.071 (3) | 0.060 (2) | 0.067 (2) | 0.002 (2) | 0.017 (2) | 0.003 (2) |
C3 | 0.073 (3) | 0.064 (3) | 0.061 (2) | 0.006 (2) | 0.019 (2) | 0.002 (2) |
C4 | 0.072 (3) | 0.063 (3) | 0.062 (2) | 0.004 (2) | 0.018 (2) | 0.003 (2) |
C5 | 0.071 (3) | 0.064 (3) | 0.056 (2) | 0.006 (2) | 0.016 (2) | 0.001 (2) |
C6 | 0.073 (3) | 0.065 (3) | 0.058 (2) | 0.005 (2) | 0.018 (2) | 0.002 (2) |
C7 | 0.070 (3) | 0.065 (3) | 0.059 (2) | 0.007 (2) | 0.016 (2) | 0.002 (2) |
Br1—C1 | 1.947 (5) | C2—H4 | 0.95 |
C1—C2 | 1.490 (5) | C3—H5 | 0.95 |
C2—C3 | 1.509 (6) | C3—H6 | 0.95 |
C3—C4 | 1.523 (5) | C4—H7 | 0.95 |
C4—C5 | 1.507 (6) | C4—H8 | 0.95 |
C5—C6 | 1.520 (5) | C5—H9 | 0.95 |
C6—C7 | 1.510 (6) | C5—H10 | 0.95 |
C7—C7i | 1.508 (7) | C6—H11 | 0.95 |
C1—H1 | 0.95 | C6—H12 | 0.95 |
C1—H2 | 0.95 | C7—H13 | 0.95 |
C2—H3 | 0.95 | C7—H14 | 0.95 |
Br1···Br1ii | 3.758 (3) | Br1···Br1iii | 3.758 (3) |
Br1—C1—C2 | 112.8 (3) | H5—C3—H6 | 109.5 |
C1—C2—C3 | 111.6 (4) | C3—C4—H7 | 108.3 |
C2—C3—C4 | 112.9 (4) | C5—C4—H7 | 108.3 |
C3—C4—C5 | 114.2 (4) | C3—C4—H8 | 108.3 |
C4—C5—C6 | 114.0 (4) | C5—C4—H8 | 108.3 |
C5—C6—C7 | 114.5 (4) | H7—C4—H8 | 109.5 |
C6—C7—C7i | 114.6 (5) | C4—C5—H9 | 108.3 |
Br1—C1—H1 | 108.6 | C6—C5—H9 | 108.3 |
C2—C1—H1 | 108.6 | C4—C5—H10 | 108.3 |
Br1—C1—H2 | 108.6 | C6—C5—H10 | 108.3 |
C2—C1—H2 | 108.6 | H9—C5—H10 | 109.5 |
H1—C1—H2 | 109.5 | C5—C6—H11 | 108.2 |
C1—C2—H3 | 108.9 | C7—C6—H11 | 108.2 |
C3—C2—H3 | 108.9 | C5—C6—H12 | 108.2 |
C1—C2—H4 | 108.9 | C7—C6—H12 | 108.2 |
C3—C2—H4 | 108.9 | H11—C6—H12 | 109.5 |
H3—C2—H4 | 109.5 | C6—C7—H13 | 108.2 |
C2—C3—H5 | 108.6 | C7i—C7—H13 | 108.2 |
C4—C3—H5 | 108.6 | C6—C7—H14 | 108.2 |
C2—C3—H6 | 108.6 | C7i—C7—H14 | 108.2 |
C4—C3—H6 | 108.6 | H13—C7—H14 | 109.5 |
Br1—C1—C2—C3 | −179.3 (3) | C4—C5—C6—C7 | 179.4 (4) |
C1—C2—C3—C4 | −180.0 (4) | C5—C6—C7—C7i | 179.8 (5) |
C2—C3—C4—C5 | 179.6 (4) | C6—C7—C7i—C6i | 180.0 |
C3—C4—C5—C6 | 179.8 (4) |
Symmetry codes: (i) −x+2, −y, −z; (ii) −x−1/2, y−1/2, −z+1/2; (iii) −x−1/2, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C14H28Br2 |
Mr | 356.16 |
Crystal system, space group | Monoclinic, P21/n |
Temperature (K) | 296 |
a, b, c (Å) | 5.486 (6), 5.389 (7), 27.827 (4) |
β (°) | 93.38 (4) |
V (Å3) | 821.2 (14) |
Z | 2 |
Radiation type | Cu Kα |
µ (mm−1) | 6.06 |
Crystal size (mm) | 0.43 × 0.43 × 0.08 |
Data collection | |
Diffractometer | Rigaku AFC-5R diffractometer |
Absorption correction | Numerical (NUMABS; Higashi, 1999) |
Tmin, Tmax | 0.208, 0.782 |
No. of measured, independent and observed [F2 > 2σ(F2)] reflections | 2304, 1563, 1305 |
Rint | 0.038 |
(sin θ/λ)max (Å−1) | 0.610 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.043, 0.099, 1.00 |
No. of reflections | 1563 |
No. of parameters | 74 |
No. of restraints | ? |
H-atom treatment | H-atom parameters not refined |
Δρmax, Δρmin (e Å−3) | 0.54, −0.55 |
Computer programs: MSC/AFC Diffractometer Control Software Molecular Structure Corporation, 1992), MSC/AFC Diffractometer Control Software, CrystalStructure (Molecular Structure Corporation & Rigaku, 2001), SIR92 (Altomare et al., 1994), CRYSTALS (Watkin et al., 1996), ORTEP-3 for Windows (Farrugia, 1997), CrystalStructure.
Br1—C1 | 1.947 (5) | C4—C5 | 1.507 (6) |
C1—C2 | 1.490 (5) | C5—C6 | 1.520 (5) |
C2—C3 | 1.509 (6) | C6—C7 | 1.510 (6) |
C3—C4 | 1.523 (5) | C7—C7i | 1.508 (7) |
Br1···Br1ii | 3.758 (3) | Br1···Br1iii | 3.758 (3) |
Br1—C1—C2—C3 | −179.3 (3) | C4—C5—C6—C7 | 179.4 (4) |
C1—C2—C3—C4 | −180.0 (4) | C5—C6—C7—C7i | 179.8 (5) |
C2—C3—C4—C5 | 179.6 (4) | C6—C7—C7i—C6i | 180.0 |
C3—C4—C5—C6 | 179.8 (4) |
Symmetry codes: (i) −x+2, −y, −z; (ii) −x−1/2, y−1/2, −z+1/2; (iii) −x−1/2, y+1/2, −z+1/2. |
Normal long-chain aliphatic compounds such as n-alkanes, a-monosubstituted n-alkanes, and α,ω-disubstituted n-alkanes, have been investigated for disclosing the principles of organic chemical crystallography and basic polymer science because the molecular skeleton consists of a simple trans zigzag straight hydrocarbon chain. The molecular shape of these compounds can be regarded as rod-like, which is one of the typical features of liquid crystalline molecules, and the molecules in the crystalline state form a layered structure similar to those of the smectic liquid crystalline phase. Moreover, some of them exhibit a high-temperature rotator phase just below their melting points in which molecules have motional freedom in some degree as well as that in liquid crystals. Therefore, normal long-chain aliphatic compounds have also been investigated as models for the smectic liquid crystals.
In these investigations, it is important to obtain the detailed crystal data. Up until now, many researchers have studied crystal structures of many different kinds of normal long-chain aliphatic compounds, for example, n-alkanes (e.g. Nyburg & Gerson, 1992), n-primary alcohols (e.g. Michaud et al., 2000), and α,ω-disubstituted n-alkanes such as 1,12-dibromododecane (Kulpe et al., 1981) and 11-bromoundecane-1-ol (Rosen & Hybl, 1972). Recently, we have systematically analyzed the crystal structures of alkane-α,ω-diols containing 10–19 and 21–23 C atoms (Nakamura et al., 2001; Uno et al., 2002), and we have studied the phase-transition phenomena of the series of alkane-α,ω-diols containing 13–24 C atoms (Ogawa & Nakamura, 1999). In addition, we have also analyzed the crystal structures of 1,16-dibromohexadecane (Kobayashi et al., 1995) and 1,18-dibromooctadecane (Nakamura et al., 1993) in order to elucidate the effect of the terminal groups in normal long-chain aliphatic compounds. Against these backgrounds, we have carried out the crystal structure analysis of 1,14-dibromotetradecane, (I). In this paper, the crystal structure of (I) is described and compared with those of the homologous series and the analogous compounds.
The molecular structure of (I) is shown in Fig. 1. The molecule is centrosymmetric and all torsion angles are about ±180°, that is, the molecular skeleton containing both terminal Br atoms has an all-trans conformation. Fig. 2 shows the projection of the crystal structure of (I) along the b axis. The molecules form layers with a thickness of c/2. In the layer, the long axes of the molecules are inclined at 37.9 (1)° with respect to the normal line to the basal plane of Br atoms, the ab plane. This layer structure is similar to those of the triclinic structure of the even-numbered n-alkanes containing 6–24 C atoms, but the inclination angle of (I) is larger than those of the even-numbered n-alkanes [e.g. n-icosane: 18.5 (1)°; Nyburg & Gerson, 1992]. It is considered that the arrangement in the layer is influenced by the steric and electrostatic repulsion of Br atoms at both ends. As the result, a molecular position in the layer is slid along the direction of the long axis of the neighboring molecule.
The repulsion also influences the interlayer arrangement so that the molecules between the neighboring layers swivel on its long axis with the dihedral angle of the trans zigzag planes of 30.1 (2)°. Moreover, the layers are arranged in a zigzag manner between the neighboring layers making a herringbone motif just like the tilt–smectic C phase of liquid crystals, as shown in Fig.3. The layers are stacked closely in such a way that the α-CH2 groups are allowed to fit into the grooves formed by Br atoms with the nearest contacts of 3.758 (3) Å, which agree closely with the van der Waals contacts of 3.75 Å (Rowland & Taylor, 1996). Such a closed packing is observed in the even-numbered alkane-α,ω-diols containing 4–18 and 22 C atoms (e.g. Thalladi et al., 2000), also.
The features in the molecular and crystal structure of (I) are similar to those of the homologous series with an even number of C atoms, viz. 1,12-dibromododecane (Kulpe et al., 1981), 1,16-dibromohexadecane (Kobayashi et al., 1995), and 1,18-dibromooctadecane (Nakamura et al., 1993).