Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536809053628/om2301sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536809053628/om2301Isup2.hkl |
CCDC reference: 766690
Key indicators
- Single-crystal X-ray study
- T = 120 K
- Mean (C-C) = 0.003 Å
- R factor = 0.042
- wR factor = 0.101
- Data-to-parameter ratio = 18.4
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT417_ALERT_2_C Short Inter D-H..H-D H2WA .. H3WB .. 2.14 Ang. PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 5 PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ ? PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 25
Alert level G PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 8
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The reaction of cobalt(II) nitrate hexahydrate (72 mg, 0.25 mmol), acridine, acr, (90 mg, 0.5 mmol) and pyrazine-2,3-dicarboxylic acid, pz-2,3-dcH2, (84 mg, 0.5 mmol) in a 1:2:2 molar ratio in aqueous solution resulted in the formation of needle like, pale yellow, (acrH)2[Co(pz-2,3-dc)2(H2O)2]. 6H2O crystals.
The hydrogen atoms of NH groups and those of water molecules were found in difference Fourier synthesis. The H(C) atom positions were calculated. Hydrogen atoms were refined in isotropic approximation in riding model with the Uiso(H) parameters equal to 1.2 Ueq(Ci), for methyl groups equal to 1.5 Ueq(Cii), where U(Ci) and U(Cii) are respectively the equivalent isotropic thermal parameters of the carbon atoms to which corresponding H atoms are bonded. H(N) and H(O) were refined using AFIX 3 starting from their difference map positions, with Uiso = 1.2 times the equivalent isotropic thermal parameter of the bonded atom.
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXTL (Sheldrick, 2008); program(s) used to refine structure: SHELXTL (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
(C13H10N)2[Co(C6H2N2O4)2(H2O)2]·6H2O | Z = 1 |
Mr = 895.69 | F(000) = 465 |
Triclinic, P1 | Dx = 1.543 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 6.9434 (15) Å | Cell parameters from 548 reflections |
b = 9.682 (2) Å | θ = 3–30° |
c = 15.660 (5) Å | µ = 0.53 mm−1 |
α = 94.60 (2)° | T = 120 K |
β = 98.59 (2)° | Needles, yellow |
γ = 110.656 (16)° | 0.35 × 0.10 × 0.10 mm |
V = 963.9 (4) Å3 |
Bruker SMART 1000 diffractometer | 5096 independent reflections |
Radiation source: fine-focus sealed tube | 3880 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.028 |
ϕ and ω scans | θmax = 29.0°, θmin = 2.3° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −9→9 |
Tmin = 0.828, Tmax = 0.949 | k = −13→13 |
10681 measured reflections | l = −21→21 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.042 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.101 | H-atom parameters constrained |
S = 1.00 | w = 1/[σ2(Fo2) + (0.0367P)2 + 0.699P] where P = (Fo2 + 2Fc2)/3 |
5096 reflections | (Δ/σ)max < 0.001 |
277 parameters | Δρmax = 0.53 e Å−3 |
0 restraints | Δρmin = −0.51 e Å−3 |
(C13H10N)2[Co(C6H2N2O4)2(H2O)2]·6H2O | γ = 110.656 (16)° |
Mr = 895.69 | V = 963.9 (4) Å3 |
Triclinic, P1 | Z = 1 |
a = 6.9434 (15) Å | Mo Kα radiation |
b = 9.682 (2) Å | µ = 0.53 mm−1 |
c = 15.660 (5) Å | T = 120 K |
α = 94.60 (2)° | 0.35 × 0.10 × 0.10 mm |
β = 98.59 (2)° |
Bruker SMART 1000 diffractometer | 5096 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3880 reflections with I > 2σ(I) |
Tmin = 0.828, Tmax = 0.949 | Rint = 0.028 |
10681 measured reflections |
R[F2 > 2σ(F2)] = 0.042 | 0 restraints |
wR(F2) = 0.101 | H-atom parameters constrained |
S = 1.00 | Δρmax = 0.53 e Å−3 |
5096 reflections | Δρmin = −0.51 e Å−3 |
277 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Co1 | 0.5000 | 1.0000 | 0.0000 | 0.01687 (10) | |
O1W | 0.7405 (2) | 1.11233 (14) | 0.10425 (8) | 0.0206 (3) | |
H1WA | 0.8327 | 1.0726 | 0.1206 | 0.025* | |
H1WB | 0.7989 | 1.2121 | 0.1140 | 0.025* | |
O1 | 0.3091 (2) | 0.90307 (14) | 0.08669 (8) | 0.0183 (3) | |
O2 | 0.2750 (2) | 0.74313 (15) | 0.18449 (9) | 0.0234 (3) | |
O3 | 0.3583 (2) | 0.45588 (14) | 0.18785 (9) | 0.0209 (3) | |
O4 | 0.6398 (2) | 0.63005 (15) | 0.27515 (8) | 0.0228 (3) | |
N1 | 0.5784 (2) | 0.81013 (16) | 0.01910 (10) | 0.0164 (3) | |
C2 | 0.5084 (3) | 0.74911 (19) | 0.08802 (11) | 0.0153 (3) | |
C3 | 0.5842 (3) | 0.64696 (19) | 0.12446 (11) | 0.0155 (3) | |
N4 | 0.7276 (2) | 0.60676 (17) | 0.09142 (10) | 0.0184 (3) | |
C5 | 0.7905 (3) | 0.6652 (2) | 0.02152 (12) | 0.0190 (4) | |
H5 | 0.8889 | 0.6364 | −0.0040 | 0.023* | |
C6 | 0.7162 (3) | 0.7669 (2) | −0.01489 (12) | 0.0184 (4) | |
H6 | 0.7641 | 0.8063 | −0.0648 | 0.022* | |
C7 | 0.3499 (3) | 0.8006 (2) | 0.12333 (11) | 0.0164 (4) | |
C8 | 0.5162 (3) | 0.5715 (2) | 0.20244 (12) | 0.0176 (4) | |
N9 | 0.6756 (2) | 0.47469 (17) | 0.40425 (10) | 0.0178 (3) | |
H9 | 0.6439 | 0.5260 | 0.3606 | 0.021* | |
C10 | 0.6512 (3) | 0.3295 (2) | 0.38850 (12) | 0.0180 (4) | |
C11 | 0.5757 (3) | 0.2510 (2) | 0.30266 (12) | 0.0219 (4) | |
H11 | 0.5427 | 0.2997 | 0.2555 | 0.026* | |
C12 | 0.5512 (3) | 0.1052 (2) | 0.28880 (13) | 0.0254 (4) | |
H12 | 0.4993 | 0.0523 | 0.2313 | 0.031* | |
C13 | 0.6007 (3) | 0.0294 (2) | 0.35744 (14) | 0.0270 (4) | |
H13 | 0.5827 | −0.0726 | 0.3456 | 0.032* | |
C14 | 0.6742 (3) | 0.1031 (2) | 0.44064 (14) | 0.0244 (4) | |
H14 | 0.7078 | 0.0521 | 0.4865 | 0.029* | |
C15 | 0.7007 (3) | 0.2556 (2) | 0.45909 (12) | 0.0196 (4) | |
C16 | 0.7708 (3) | 0.3361 (2) | 0.54300 (12) | 0.0216 (4) | |
H16 | 0.8046 | 0.2886 | 0.5907 | 0.026* | |
C17 | 0.7918 (3) | 0.4849 (2) | 0.55801 (12) | 0.0209 (4) | |
C18 | 0.8584 (3) | 0.5710 (3) | 0.64269 (13) | 0.0262 (4) | |
H18 | 0.8900 | 0.5263 | 0.6921 | 0.031* | |
C19 | 0.8771 (3) | 0.7159 (3) | 0.65353 (13) | 0.0289 (5) | |
H19 | 0.9211 | 0.7717 | 0.7103 | 0.035* | |
C20 | 0.8314 (3) | 0.7843 (2) | 0.58062 (14) | 0.0265 (4) | |
H20 | 0.8468 | 0.8862 | 0.5893 | 0.032* | |
C21 | 0.7655 (3) | 0.7068 (2) | 0.49774 (13) | 0.0222 (4) | |
H21 | 0.7351 | 0.7541 | 0.4494 | 0.027* | |
C22 | 0.7435 (3) | 0.5551 (2) | 0.48544 (12) | 0.0182 (4) | |
O2W | 0.0497 (2) | 0.83209 (16) | 0.29844 (9) | 0.0253 (3) | |
H2WA | 0.1136 | 0.7940 | 0.2619 | 0.030* | |
H2WB | −0.0814 | 0.7706 | 0.2906 | 0.030* | |
O3W | 0.9656 (2) | 0.99532 (15) | 0.83648 (9) | 0.0249 (3) | |
H3WA | 0.8947 | 1.0289 | 0.8693 | 0.030* | |
H3WB | 0.9717 | 1.0336 | 0.7911 | 0.030* | |
O4W | −0.0631 (2) | 0.40692 (16) | 0.12903 (11) | 0.0354 (4) | |
H4WA | 0.0802 | 0.4505 | 0.1498 | 0.042* | |
H4WB | −0.1329 | 0.4762 | 0.1288 | 0.042* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Co1 | 0.01858 (19) | 0.01624 (18) | 0.01689 (18) | 0.00754 (14) | 0.00289 (14) | 0.00433 (13) |
O1W | 0.0203 (7) | 0.0165 (6) | 0.0235 (7) | 0.0078 (5) | −0.0020 (5) | 0.0013 (5) |
O1 | 0.0197 (7) | 0.0186 (6) | 0.0206 (7) | 0.0107 (5) | 0.0053 (5) | 0.0055 (5) |
O2 | 0.0269 (7) | 0.0250 (7) | 0.0257 (7) | 0.0136 (6) | 0.0131 (6) | 0.0110 (6) |
O3 | 0.0201 (7) | 0.0187 (7) | 0.0229 (7) | 0.0056 (5) | 0.0034 (5) | 0.0059 (5) |
O4 | 0.0231 (7) | 0.0261 (7) | 0.0162 (6) | 0.0059 (6) | 0.0014 (5) | 0.0056 (5) |
N1 | 0.0192 (8) | 0.0143 (7) | 0.0147 (7) | 0.0058 (6) | 0.0022 (6) | 0.0014 (6) |
C2 | 0.0153 (8) | 0.0130 (8) | 0.0158 (8) | 0.0048 (7) | 0.0003 (7) | −0.0004 (6) |
C3 | 0.0170 (8) | 0.0138 (8) | 0.0145 (8) | 0.0051 (7) | 0.0009 (7) | 0.0010 (6) |
N4 | 0.0200 (8) | 0.0174 (8) | 0.0190 (8) | 0.0083 (6) | 0.0035 (6) | 0.0034 (6) |
C5 | 0.0209 (9) | 0.0189 (9) | 0.0187 (9) | 0.0088 (8) | 0.0051 (7) | 0.0008 (7) |
C6 | 0.0210 (9) | 0.0187 (9) | 0.0170 (9) | 0.0083 (7) | 0.0051 (7) | 0.0040 (7) |
C7 | 0.0161 (9) | 0.0155 (8) | 0.0167 (8) | 0.0053 (7) | 0.0018 (7) | 0.0019 (7) |
C8 | 0.0196 (9) | 0.0191 (9) | 0.0184 (9) | 0.0112 (7) | 0.0048 (7) | 0.0059 (7) |
N9 | 0.0164 (7) | 0.0229 (8) | 0.0145 (7) | 0.0076 (6) | 0.0024 (6) | 0.0049 (6) |
C10 | 0.0140 (8) | 0.0232 (9) | 0.0172 (9) | 0.0066 (7) | 0.0035 (7) | 0.0055 (7) |
C11 | 0.0197 (9) | 0.0261 (10) | 0.0186 (9) | 0.0075 (8) | 0.0021 (7) | 0.0038 (8) |
C12 | 0.0225 (10) | 0.0259 (10) | 0.0235 (10) | 0.0049 (8) | 0.0031 (8) | 0.0005 (8) |
C13 | 0.0239 (10) | 0.0197 (10) | 0.0358 (12) | 0.0060 (8) | 0.0055 (9) | 0.0045 (8) |
C14 | 0.0207 (10) | 0.0260 (10) | 0.0292 (10) | 0.0095 (8) | 0.0057 (8) | 0.0125 (8) |
C15 | 0.0140 (8) | 0.0267 (10) | 0.0198 (9) | 0.0083 (8) | 0.0045 (7) | 0.0076 (8) |
C16 | 0.0160 (9) | 0.0334 (11) | 0.0187 (9) | 0.0107 (8) | 0.0054 (7) | 0.0113 (8) |
C17 | 0.0152 (9) | 0.0336 (11) | 0.0155 (9) | 0.0103 (8) | 0.0036 (7) | 0.0052 (8) |
C18 | 0.0193 (10) | 0.0457 (13) | 0.0158 (9) | 0.0152 (9) | 0.0028 (7) | 0.0025 (9) |
C19 | 0.0205 (10) | 0.0442 (13) | 0.0200 (10) | 0.0124 (9) | 0.0025 (8) | −0.0059 (9) |
C20 | 0.0189 (10) | 0.0321 (11) | 0.0286 (11) | 0.0111 (9) | 0.0052 (8) | −0.0031 (9) |
C21 | 0.0187 (9) | 0.0275 (10) | 0.0222 (9) | 0.0108 (8) | 0.0044 (7) | 0.0032 (8) |
C22 | 0.0125 (8) | 0.0265 (10) | 0.0157 (8) | 0.0072 (7) | 0.0039 (7) | 0.0025 (7) |
O2W | 0.0227 (7) | 0.0293 (8) | 0.0244 (7) | 0.0093 (6) | 0.0071 (6) | 0.0042 (6) |
O3W | 0.0291 (8) | 0.0299 (8) | 0.0247 (7) | 0.0196 (6) | 0.0079 (6) | 0.0088 (6) |
O4W | 0.0200 (7) | 0.0181 (7) | 0.0642 (11) | 0.0077 (6) | −0.0030 (7) | 0.0021 (7) |
Co1—O1W | 2.0631 (14) | C11—C12 | 1.356 (3) |
Co1—O1Wi | 2.0631 (14) | C11—H11 | 0.9500 |
Co1—O1i | 2.0846 (14) | C12—C13 | 1.416 (3) |
Co1—O1 | 2.0846 (14) | C12—H12 | 0.9500 |
Co1—N1 | 2.1237 (15) | C13—C14 | 1.365 (3) |
Co1—N1i | 2.1237 (15) | C13—H13 | 0.9500 |
O1W—H1WA | 0.8741 | C14—C15 | 1.422 (3) |
O1W—H1WB | 0.8956 | C14—H14 | 0.9500 |
O1—C7 | 1.279 (2) | C15—C16 | 1.396 (3) |
O2—C7 | 1.236 (2) | C16—C17 | 1.393 (3) |
O3—C8 | 1.235 (2) | C16—H16 | 0.9500 |
O4—C8 | 1.271 (2) | C17—C18 | 1.426 (3) |
N1—C6 | 1.332 (2) | C17—C22 | 1.427 (3) |
N1—C2 | 1.344 (2) | C18—C19 | 1.357 (3) |
C2—C3 | 1.396 (2) | C18—H18 | 0.9500 |
C2—C7 | 1.513 (2) | C19—C20 | 1.416 (3) |
C3—N4 | 1.344 (2) | C19—H19 | 0.9500 |
C3—C8 | 1.523 (2) | C20—C21 | 1.372 (3) |
N4—C5 | 1.333 (2) | C20—H20 | 0.9500 |
C5—C6 | 1.386 (3) | C21—C22 | 1.416 (3) |
C5—H5 | 0.9500 | C21—H21 | 0.9500 |
C6—H6 | 0.9500 | O2W—H2WA | 0.9045 |
N9—C10 | 1.352 (2) | O2W—H2WB | 0.8778 |
N9—C22 | 1.359 (2) | O3W—H3WA | 0.8802 |
N9—H9 | 0.9214 | O3W—H3WB | 0.8268 |
C10—C11 | 1.416 (3) | O4W—H4WA | 0.9266 |
C10—C15 | 1.428 (3) | O4W—H4WB | 0.9560 |
O1W—Co1—O1Wi | 180.00 (8) | C22—N9—H9 | 114.8 |
O1W—Co1—O1i | 90.43 (6) | N9—C10—C11 | 120.24 (16) |
O1Wi—Co1—O1i | 89.57 (6) | N9—C10—C15 | 119.61 (17) |
O1W—Co1—O1 | 89.57 (6) | C11—C10—C15 | 120.15 (18) |
O1Wi—Co1—O1 | 90.43 (6) | C12—C11—C10 | 119.03 (18) |
O1i—Co1—O1 | 180.0 | C12—C11—H11 | 120.5 |
O1W—Co1—N1 | 86.35 (6) | C10—C11—H11 | 120.5 |
O1Wi—Co1—N1 | 93.65 (6) | C11—C12—C13 | 122.01 (19) |
O1i—Co1—N1 | 101.76 (6) | C11—C12—H12 | 119.0 |
O1—Co1—N1 | 78.24 (6) | C13—C12—H12 | 119.0 |
O1W—Co1—N1i | 93.65 (6) | C14—C13—C12 | 119.96 (19) |
O1Wi—Co1—N1i | 86.35 (6) | C14—C13—H13 | 120.0 |
O1i—Co1—N1i | 78.24 (6) | C12—C13—H13 | 120.0 |
O1—Co1—N1i | 101.76 (6) | C13—C14—C15 | 120.42 (18) |
N1—Co1—N1i | 180.000 (1) | C13—C14—H14 | 119.8 |
Co1—O1W—H1WA | 118.4 | C15—C14—H14 | 119.8 |
Co1—O1W—H1WB | 121.9 | C16—C15—C14 | 123.17 (18) |
H1WA—O1W—H1WB | 111.1 | C16—C15—C10 | 118.39 (18) |
C7—O1—Co1 | 116.07 (11) | C14—C15—C10 | 118.43 (18) |
C6—N1—C2 | 118.22 (15) | C17—C16—C15 | 121.10 (17) |
C6—N1—Co1 | 128.58 (12) | C17—C16—H16 | 119.5 |
C2—N1—Co1 | 111.60 (12) | C15—C16—H16 | 119.5 |
N1—C2—C3 | 120.57 (16) | C16—C17—C18 | 123.23 (18) |
N1—C2—C7 | 116.06 (15) | C16—C17—C22 | 118.67 (17) |
C3—C2—C7 | 123.36 (16) | C18—C17—C22 | 118.11 (19) |
N4—C3—C2 | 120.99 (16) | C19—C18—C17 | 120.76 (19) |
N4—C3—C8 | 114.13 (15) | C19—C18—H18 | 119.6 |
C2—C3—C8 | 124.87 (16) | C17—C18—H18 | 119.6 |
C5—N4—C3 | 117.53 (15) | C18—C19—C20 | 120.36 (19) |
N4—C5—C6 | 121.74 (17) | C18—C19—H19 | 119.8 |
N4—C5—H5 | 119.1 | C20—C19—H19 | 119.8 |
C6—C5—H5 | 119.1 | C21—C20—C19 | 121.5 (2) |
N1—C6—C5 | 120.89 (17) | C21—C20—H20 | 119.3 |
N1—C6—H6 | 119.6 | C19—C20—H20 | 119.3 |
C5—C6—H6 | 119.6 | C20—C21—C22 | 118.87 (19) |
O2—C7—O1 | 126.20 (17) | C20—C21—H21 | 120.6 |
O2—C7—C2 | 118.32 (16) | C22—C21—H21 | 120.6 |
O1—C7—C2 | 115.47 (15) | N9—C22—C21 | 120.25 (17) |
O3—C8—O4 | 127.19 (17) | N9—C22—C17 | 119.30 (18) |
O3—C8—C3 | 117.46 (16) | C21—C22—C17 | 120.45 (17) |
O4—C8—C3 | 115.12 (16) | H2WA—O2W—H2WB | 107.6 |
C10—N9—C22 | 122.92 (16) | H3WA—O3W—H3WB | 110.8 |
C10—N9—H9 | 122.3 | H4WA—O4W—H4WB | 113.8 |
O1W—Co1—O1—C7 | −73.69 (13) | C2—C3—C8—O3 | 86.2 (2) |
O1Wi—Co1—O1—C7 | 106.31 (13) | N4—C3—C8—O4 | 81.2 (2) |
N1—Co1—O1—C7 | 12.67 (12) | C2—C3—C8—O4 | −99.0 (2) |
N1i—Co1—O1—C7 | −167.33 (12) | C22—N9—C10—C11 | 178.69 (17) |
O1W—Co1—N1—C6 | −88.80 (16) | C22—N9—C10—C15 | −0.9 (3) |
O1Wi—Co1—N1—C6 | 91.19 (16) | N9—C10—C11—C12 | −179.51 (18) |
O1i—Co1—N1—C6 | 0.87 (16) | C15—C10—C11—C12 | 0.1 (3) |
O1—Co1—N1—C6 | −179.13 (16) | C10—C11—C12—C13 | −0.6 (3) |
O1W—Co1—N1—C2 | 76.28 (12) | C11—C12—C13—C14 | 0.4 (3) |
O1Wi—Co1—N1—C2 | −103.72 (12) | C12—C13—C14—C15 | 0.3 (3) |
O1i—Co1—N1—C2 | 165.96 (12) | C13—C14—C15—C16 | 178.53 (19) |
O1—Co1—N1—C2 | −14.04 (12) | C13—C14—C15—C10 | −0.7 (3) |
C6—N1—C2—C3 | 2.1 (3) | N9—C10—C15—C16 | 0.9 (3) |
Co1—N1—C2—C3 | −164.70 (13) | C11—C10—C15—C16 | −178.74 (17) |
C6—N1—C2—C7 | −179.20 (15) | N9—C10—C15—C14 | −179.83 (17) |
Co1—N1—C2—C7 | 14.00 (19) | C11—C10—C15—C14 | 0.6 (3) |
N1—C2—C3—N4 | −0.3 (3) | C14—C15—C16—C17 | −179.19 (18) |
C7—C2—C3—N4 | −178.91 (16) | C10—C15—C16—C17 | 0.1 (3) |
N1—C2—C3—C8 | 179.89 (16) | C15—C16—C17—C18 | 178.62 (18) |
C7—C2—C3—C8 | 1.3 (3) | C15—C16—C17—C22 | −1.0 (3) |
C2—C3—N4—C5 | −1.6 (3) | C16—C17—C18—C19 | 179.72 (19) |
C8—C3—N4—C5 | 178.23 (16) | C22—C17—C18—C19 | −0.7 (3) |
C3—N4—C5—C6 | 1.7 (3) | C17—C18—C19—C20 | −0.3 (3) |
C2—N1—C6—C5 | −2.0 (3) | C18—C19—C20—C21 | 0.7 (3) |
Co1—N1—C6—C5 | 162.24 (14) | C19—C20—C21—C22 | −0.1 (3) |
N4—C5—C6—N1 | 0.1 (3) | C10—N9—C22—C21 | −179.90 (17) |
Co1—O1—C7—O2 | 169.89 (15) | C10—N9—C22—C17 | 0.0 (3) |
Co1—O1—C7—C2 | −8.93 (19) | C20—C21—C22—N9 | 179.06 (17) |
N1—C2—C7—O2 | 177.20 (16) | C20—C21—C22—C17 | −0.8 (3) |
C3—C2—C7—O2 | −4.1 (3) | C16—C17—C22—N9 | 1.0 (3) |
N1—C2—C7—O1 | −3.9 (2) | C18—C17—C22—N9 | −178.67 (16) |
C3—C2—C7—O1 | 174.79 (16) | C16—C17—C22—C21 | −179.16 (17) |
N4—C3—C8—O3 | −93.7 (2) | C18—C17—C22—C21 | 1.2 (3) |
Symmetry code: (i) −x+1, −y+2, −z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O3Wii | 0.87 | 1.81 | 2.684 (2) | 174 |
O1W—H1WB···O4Wiii | 0.90 | 1.77 | 2.658 (2) | 174 |
O2W—H2WA···O2 | 0.90 | 1.92 | 2.813 (2) | 172 |
O2W—H2WB···O4iv | 0.88 | 1.90 | 2.776 (2) | 177 |
O3W—H3WA···O1v | 0.88 | 1.95 | 2.806 (2) | 165 |
O3W—H3WB···O2Wv | 0.83 | 2.01 | 2.809 (2) | 162 |
O4W—H4WA···O3 | 0.93 | 1.91 | 2.789 (2) | 156 |
O4W—H4WB···N4iv | 0.96 | 1.92 | 2.848 (2) | 163 |
N9—H9···O4 | 0.92 | 1.74 | 2.648 (2) | 167 |
C11—H11···O3 | 0.95 | 2.50 | 3.365 (3) | 151 |
C12—H12···O1vi | 0.95 | 2.49 | 3.431 (3) | 171 |
C16—H16···O2Wvii | 0.95 | 2.46 | 3.395 (3) | 169 |
Symmetry codes: (ii) −x+2, −y+2, −z+1; (iii) x+1, y+1, z; (iv) x−1, y, z; (v) −x+1, −y+2, −z+1; (vi) x, y−1, z; (vii) −x+1, −y+1, −z+1. |
Experimental details
Crystal data | |
Chemical formula | (C13H10N)2[Co(C6H2N2O4)2(H2O)2]·6H2O |
Mr | 895.69 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 120 |
a, b, c (Å) | 6.9434 (15), 9.682 (2), 15.660 (5) |
α, β, γ (°) | 94.60 (2), 98.59 (2), 110.656 (16) |
V (Å3) | 963.9 (4) |
Z | 1 |
Radiation type | Mo Kα |
µ (mm−1) | 0.53 |
Crystal size (mm) | 0.35 × 0.10 × 0.10 |
Data collection | |
Diffractometer | Bruker SMART 1000 diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.828, 0.949 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 10681, 5096, 3880 |
Rint | 0.028 |
(sin θ/λ)max (Å−1) | 0.682 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.042, 0.101, 1.00 |
No. of reflections | 5096 |
No. of parameters | 277 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.53, −0.51 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O1W—H1WA···O3Wi | 0.87 | 1.81 | 2.684 (2) | 174 |
O1W—H1WB···O4Wii | 0.90 | 1.77 | 2.658 (2) | 174 |
O2W—H2WA···O2 | 0.90 | 1.92 | 2.813 (2) | 172 |
O2W—H2WB···O4iii | 0.88 | 1.90 | 2.776 (2) | 177 |
O3W—H3WA···O1iv | 0.88 | 1.95 | 2.806 (2) | 165 |
O3W—H3WB···O2Wiv | 0.83 | 2.01 | 2.809 (2) | 162 |
O4W—H4WA···O3 | 0.93 | 1.91 | 2.789 (2) | 156 |
O4W—H4WB···N4iii | 0.96 | 1.92 | 2.848 (2) | 163 |
N9—H9···O4 | 0.92 | 1.74 | 2.648 (2) | 167 |
C11—H11···O3 | 0.95 | 2.50 | 3.365 (3) | 151 |
C12—H12···O1v | 0.95 | 2.49 | 3.431 (3) | 171 |
C16—H16···O2Wvi | 0.95 | 2.46 | 3.395 (3) | 169 |
Symmetry codes: (i) −x+2, −y+2, −z+1; (ii) x+1, y+1, z; (iii) x−1, y, z; (iv) −x+1, −y+2, −z+1; (v) x, y−1, z; (vi) −x+1, −y+1, −z+1. |
Takusagawa & Shimada (1973) first determined the structure of pyrazine-2,3-dicarboxlic acid by single-crystal X-ray analysis. Pyrazine-2,3-dicarboxylic acid, (pz-2,3-dcH2), has proved to be well suited for the construction of multidimensional frameworks due to the presence of two adjacent carboxylate groups (O donor atoms) as substituents on the N-heterocyclic pyrazine ring (N donor atoms). A variety of metal-organic compounds of pyrazine-2,3-dicarboxylic acid have been characterized crystallographically. Among many reported compounds, complexes of transition metal ions, including manganese (Zou et al., 1999), copper (Konar et al.,2004), zinc (Li et al., 2003), iron (Xu et al., 2008) and cadmium (Ma et al., 2006), are extensively studied. Also, there are many reported compounds of (pz-2,3-dcH2) with main group metals such as calcium (Ptasiewicz-Bak & Leciejewicz, 1997a), magnesium (Ptasiewicz-Bak & Leciejewicz, 1997b) and sodium (Tombul et al., 2006) complexes. In this paper, we report the synthesis and crystal structure of the title compound.
The reaction of pyrazine-2,3-dicarboxlic acid, acridine and cobalt(II) nitrate, resulted in the formation of (acrH)2[Co(py-2,3-dc)2(H2O)2]. 6H2O. This compound consists of an anionic complex, trans-[Co(pz-2,3-dc)2(H2O)2]2–, counter-ions, (acrH)+ and six uncoordinated water molecules. In the title compound, two carboxylic COOH protons have been transferred to non-coordinated pyridine rings of acridine. The central Co1 atom is six-coordinated by N1, O1, N1i and O1i atoms in the equatorial plane from two (pz-2,3-dc)2– ligands and by two water molecules, O1W and O1Wi, in the axial position [symmetry code (i), -x + 1,-y + 2, -z] (see Fig. 1). The water molecules are almost perpendicular to the plane of (pz-2,3-dc)2– ligands, with O1W—Co1—N1, O1W—Co1—O1, O1Wi—Co1—N1 and O1Wi—Co1—O1 angles of 86.35 (6), 89.57 (6), 93.65 (6) and 90.43 (6)°, respectively.
The coordination environment around the CoII may be considered as slightly distorted octahedral. The anionic complex lies on a crystallographic center of symmetry. The mean Co—N and Co—O bond distances are 2.1237 (15) and 2.0738 (14) Å, respectively, which are consistent with our previously reported data for CoII complexes (Aghabozorg et al., 2009; Aghabozorg, Attar Gharamaleki et al., 2008; Aghabozorg, Manteghi, Sheshmani, 2008; Aghabozorg et al., 2007).
In the structure of the title compound, (acrH)+ cations and [Co(pz-2,3-dc)2(H2O)2]2– anions are linked together by two classical N9—H9···O4 and non-classical C11—H11···O3 hydrogen bonds by R22(8) graph-set motifs. Also, the coordinated and uncoordinated water molecules are involved in O—H···O hydrogen bonds with O···O distances of 2.658 (2) to 2.813 (2) Å, which lead to the formation of chains with R33(12) graph-set motifs (Fig. 2).
As can be seen from Fig. 3, in the crystal structure of (acrH)2[Co(pz-2,3-dc)2(H2O)2].6H2O, the spaces between two layers of (acrH)+ cations (as counter-ions) are filled with layers of [Co(pz-2,3-dc)2(H2O)2]2– fragments and uncoordinated water molecules. Also an extensive π-π stacking interaction between aromatic rings of acridinium ions, (acrH)+, with centroid-centroid distances ranging from 3.533 (1) to 3.613 (1) Å are observed (Fig.4).