Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536808033898/pv2109sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536808033898/pv2109Isup2.hkl |
CCDC reference: 709416
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.006 Å
- R factor = 0.029
- wR factor = 0.106
- Data-to-parameter ratio = 19.0
checkCIF/PLATON results
No syntax errors found
Alert level C Value of measurement temperature given = 296.000 Value of melting point given = 0.000 PLAT420_ALERT_2_C D-H Without Acceptor N2 - H2B ... ? PLAT731_ALERT_1_C Bond Calc 0.86(4), Rep 0.862(10) ...... 4.00 su-Ra N2 -H2A 1.555 1.555 PLAT731_ALERT_1_C Bond Calc 0.86(4), Rep 0.860(10) ...... 4.00 su-Ra N2 -H2B 1.555 1.555 PLAT735_ALERT_1_C D-H Calc 0.86(4), Rep 0.862(10) ...... 4.00 su-Ra N2 -H2A 1.555 1.555 PLAT736_ALERT_1_C H...A Calc 2.24(4), Rep 2.240(14) ...... 2.86 su-Ra H2A -O1 1.555 2.555
Alert level G PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 5 ALERT level C = Check and explain 1 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 1 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
All reagent-grade chemicals were obtained from Aldrich and Sigma Chemical companies and were used without further purification. To a solution of ethyl-4-iodobenzoate (5.5 g, 20 mmol) in 75 ml ethanol, hydrazine hydrate (5.0 ml, 100 mmol) was added. The mixture was refluxed for 5 h and a solid was obtained upon removal of the solvent by rotary evaporation. The resulting solid was washed with hexane to afford 4-iodobenzohydrazide (yield 84%).
H-atoms bonded to N-atoms were located from a difference map and were included in the refinement at those positions (using DFIX command with N—H = 0.86 (1) Å) while the aryl H-atoms were positioned geometrically in a riding mode, with C—H = 0.93 Å; for all H-atoms, Uiso = 1.2 times Ueq of the parent atoms.
Data collection: APEX2 (Bruker, 2007); cell refinement: APEX2 (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008).
C7H7IN2O | F(000) = 992 |
Mr = 262.05 | Dx = 2.072 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C 2yc | Cell parameters from 3495 reflections |
a = 28.4394 (18) Å | θ = 1.4–28.3° |
b = 4.4514 (3) Å | µ = 3.76 mm−1 |
c = 13.3216 (9) Å | T = 296 K |
β = 94.292 (2)° | Needle, colorless |
V = 1681.72 (19) Å3 | 0.12 × 0.08 × 0.06 mm |
Z = 8 |
Bruker KappaAPEXII CCD diffractometer | 2069 independent reflections |
Radiation source: fine-focus sealed tube | 1645 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.030 |
ω scans | θmax = 28.3°, θmin = 1.4° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −37→37 |
Tmin = 0.581, Tmax = 0.806 | k = −5→5 |
9236 measured reflections | l = −17→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.029 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.106 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0565P)2 + 5.77P] where P = (Fo2 + 2Fc2)/3 |
2069 reflections | (Δ/σ)max = 0.001 |
109 parameters | Δρmax = 0.55 e Å−3 |
3 restraints | Δρmin = −1.33 e Å−3 |
C7H7IN2O | V = 1681.72 (19) Å3 |
Mr = 262.05 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 28.4394 (18) Å | µ = 3.76 mm−1 |
b = 4.4514 (3) Å | T = 296 K |
c = 13.3216 (9) Å | 0.12 × 0.08 × 0.06 mm |
β = 94.292 (2)° |
Bruker KappaAPEXII CCD diffractometer | 2069 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1645 reflections with I > 2σ(I) |
Tmin = 0.581, Tmax = 0.806 | Rint = 0.030 |
9236 measured reflections |
R[F2 > 2σ(F2)] = 0.029 | 3 restraints |
wR(F2) = 0.106 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.55 e Å−3 |
2069 reflections | Δρmin = −1.33 e Å−3 |
109 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
I1 | 0.215538 (11) | 1.09655 (7) | 0.64904 (2) | 0.05339 (15) | |
O1 | 0.05919 (14) | 0.3811 (8) | 0.2873 (2) | 0.0582 (10) | |
N1 | 0.03174 (13) | 0.1851 (9) | 0.4262 (2) | 0.0404 (8) | |
H1A | 0.0321 (18) | 0.170 (11) | 0.4905 (9) | 0.049* | |
N2 | −0.00239 (14) | 0.0017 (10) | 0.3743 (2) | 0.0408 (8) | |
H2A | −0.0195 (16) | 0.119 (9) | 0.335 (3) | 0.049* | |
H2B | 0.0127 (17) | −0.126 (9) | 0.341 (3) | 0.049* | |
C1 | 0.09627 (14) | 0.5363 (10) | 0.4445 (3) | 0.0358 (8) | |
C2 | 0.09382 (15) | 0.5693 (10) | 0.5484 (3) | 0.0403 (9) | |
H2 | 0.0695 | 0.4777 | 0.5799 | 0.048* | |
C3 | 0.12697 (15) | 0.7356 (11) | 0.6046 (3) | 0.0441 (10) | |
H3 | 0.1244 | 0.7611 | 0.6733 | 0.053* | |
C4 | 0.16380 (15) | 0.8638 (9) | 0.5594 (3) | 0.0397 (9) | |
C5 | 0.16696 (17) | 0.8370 (11) | 0.4566 (3) | 0.0489 (11) | |
H5 | 0.1918 | 0.9256 | 0.4260 | 0.059* | |
C6 | 0.13267 (18) | 0.6768 (12) | 0.3998 (3) | 0.0489 (11) | |
H6 | 0.1342 | 0.6637 | 0.3305 | 0.059* | |
C7 | 0.06129 (16) | 0.3608 (9) | 0.3801 (3) | 0.0375 (9) |
U11 | U22 | U33 | U12 | U13 | U23 | |
I1 | 0.0461 (2) | 0.0498 (2) | 0.0626 (2) | −0.00097 (13) | −0.00736 (14) | 0.00125 (13) |
O1 | 0.069 (2) | 0.080 (3) | 0.0273 (13) | −0.0221 (19) | 0.0124 (14) | −0.0003 (14) |
N1 | 0.0469 (19) | 0.0465 (19) | 0.0277 (14) | −0.0046 (17) | 0.0010 (13) | 0.0067 (14) |
N2 | 0.050 (2) | 0.0425 (19) | 0.0302 (15) | 0.0003 (17) | 0.0039 (14) | 0.0051 (15) |
C1 | 0.0384 (19) | 0.038 (2) | 0.0317 (17) | 0.0053 (17) | 0.0080 (14) | 0.0015 (16) |
C2 | 0.039 (2) | 0.051 (3) | 0.0317 (17) | −0.0001 (18) | 0.0109 (15) | 0.0041 (17) |
C3 | 0.043 (2) | 0.054 (3) | 0.0352 (18) | 0.001 (2) | 0.0049 (16) | 0.0000 (19) |
C4 | 0.036 (2) | 0.039 (2) | 0.044 (2) | 0.0035 (16) | −0.0004 (16) | 0.0018 (17) |
C5 | 0.048 (2) | 0.053 (3) | 0.047 (2) | −0.008 (2) | 0.0168 (19) | 0.002 (2) |
C6 | 0.055 (3) | 0.056 (3) | 0.038 (2) | −0.004 (2) | 0.0156 (19) | 0.001 (2) |
C7 | 0.042 (2) | 0.041 (2) | 0.0309 (17) | 0.0060 (17) | 0.0088 (15) | 0.0037 (15) |
I1—C4 | 2.098 (4) | C1—C7 | 1.486 (6) |
O1—C7 | 1.237 (5) | C2—C3 | 1.375 (6) |
N1—C7 | 1.332 (5) | C2—H2 | 0.9300 |
N1—N2 | 1.410 (6) | C3—C4 | 1.371 (6) |
N1—H1A | 0.857 (10) | C3—H3 | 0.9300 |
N2—H2A | 0.862 (10) | C4—C5 | 1.384 (6) |
N2—H2B | 0.860 (10) | C5—C6 | 1.386 (7) |
C1—C6 | 1.382 (6) | C5—H5 | 0.9300 |
C1—C2 | 1.398 (5) | C6—H6 | 0.9300 |
C7—N1—N2 | 123.3 (3) | C2—C3—H3 | 120.0 |
C7—N1—H1A | 123 (3) | C3—C4—C5 | 120.5 (4) |
N2—N1—H1A | 114 (3) | C3—C4—I1 | 118.8 (3) |
N1—N2—H2A | 106 (3) | C5—C4—I1 | 120.7 (3) |
N1—N2—H2B | 107 (4) | C4—C5—C6 | 119.3 (4) |
H2A—N2—H2B | 112 (5) | C4—C5—H5 | 120.4 |
C6—C1—C2 | 118.3 (4) | C6—C5—H5 | 120.4 |
C6—C1—C7 | 118.6 (3) | C1—C6—C5 | 121.1 (4) |
C2—C1—C7 | 123.1 (4) | C1—C6—H6 | 119.5 |
C3—C2—C1 | 120.8 (4) | C5—C6—H6 | 119.5 |
C3—C2—H2 | 119.6 | O1—C7—N1 | 121.3 (4) |
C1—C2—H2 | 119.6 | O1—C7—C1 | 121.3 (4) |
C4—C3—C2 | 120.0 (4) | N1—C7—C1 | 117.4 (3) |
C4—C3—H3 | 120.0 | ||
C6—C1—C2—C3 | −0.5 (7) | C7—C1—C6—C5 | −178.3 (4) |
C7—C1—C2—C3 | −179.6 (4) | C4—C5—C6—C1 | −1.9 (8) |
C1—C2—C3—C4 | −2.0 (7) | N2—N1—C7—O1 | 2.7 (7) |
C2—C3—C4—C5 | 2.5 (7) | N2—N1—C7—C1 | −178.5 (4) |
C2—C3—C4—I1 | −176.8 (3) | C6—C1—C7—O1 | −12.8 (6) |
C3—C4—C5—C6 | −0.6 (7) | C2—C1—C7—O1 | 166.3 (4) |
I1—C4—C5—C6 | 178.8 (4) | C6—C1—C7—N1 | 168.4 (4) |
C2—C1—C6—C5 | 2.4 (7) | C2—C1—C7—N1 | −12.4 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···N2i | 0.86 (1) | 2.19 (3) | 2.964 (5) | 151 (5) |
N2—H2A···O1ii | 0.86 (1) | 2.24 (1) | 3.094 (5) | 170 (5) |
C3—H3···O1iii | 0.93 | 2.56 | 3.257 (5) | 132 |
Symmetry codes: (i) −x, −y, −z+1; (ii) −x, y, −z+1/2; (iii) x, −y+1, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C7H7IN2O |
Mr | 262.05 |
Crystal system, space group | Monoclinic, C2/c |
Temperature (K) | 296 |
a, b, c (Å) | 28.4394 (18), 4.4514 (3), 13.3216 (9) |
β (°) | 94.292 (2) |
V (Å3) | 1681.72 (19) |
Z | 8 |
Radiation type | Mo Kα |
µ (mm−1) | 3.76 |
Crystal size (mm) | 0.12 × 0.08 × 0.06 |
Data collection | |
Diffractometer | Bruker KappaAPEXII CCD diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.581, 0.806 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 9236, 2069, 1645 |
Rint | 0.030 |
(sin θ/λ)max (Å−1) | 0.667 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.029, 0.106, 1.05 |
No. of reflections | 2069 |
No. of parameters | 109 |
No. of restraints | 3 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.55, −1.33 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···N2i | 0.857 (10) | 2.19 (3) | 2.964 (5) | 151 (5) |
N2—H2A···O1ii | 0.862 (10) | 2.240 (14) | 3.094 (5) | 170 (5) |
C3—H3···O1iii | 0.93 | 2.56 | 3.257 (5) | 132 |
Symmetry codes: (i) −x, −y, −z+1; (ii) −x, y, −z+1/2; (iii) x, −y+1, z+1/2. |
The title compound and its oxovanadium(IV) complex were investigated for their α-glucosidase inhibitory and urease activities. Free hydrazide ligand was found to be inactive, whereas its oxovanadium(IV) complex was found to be a potent inhibitor of α-glucosidase (Ashiq, Ara et al., 2008) and urease (Ara et al., 2007). Continuing our studies on the enzyme inhibition behavior of the title compound, (I), and to investigate the change in its activity due to complexation with vanadium center, we have synthesized (I) and report its crystal structure in this paper. The structures of benzhydrazide (Kallel et al., 1992), para-chloro (Saraogi et al., 2002) and para-bromo (Ashiq, Jamal et al., 2008) analogues of (I) have already been reported.
The molecule of the title compound (Fig. 1) is far from planar as is evident from the dihedral angle of 13.3 (3)° between the mean-planes of the phenyl ring (C1-C6) and the hydrazide moiety (N1/N2/O1/C7). The bond distances and bond angles in (I) are similar to the corersponding distances and angles reported in the structures quoted above. The molecules of (I) are involved in two types of hydrogen bonds involving hydrazide moiety. On one hand, the molecules lying about inversion centers form six membered rings via N1—H1A···N2i hydrogen bonding. On the other hand, the molecules related by c-glide form ten membered rings via N2—H2A···O1ii; detail of the hydrogen bonding have been presented in Table 1 and depicted in Fig. 2. The six and ten membered rings represent R22(6) and R22(10) graph set patterns, respectively (Bernstein et al., 1994).