Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536808037203/pv2111sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536808037203/pv2111Isup2.hkl |
CCDC reference: 712308
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.019
- wR factor = 0.048
- Data-to-parameter ratio = 15.4
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- O1W .. 11.65 su PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- O3_b .. 20.71 su PLAT232_ALERT_2_B Hirshfeld Test Diff (M-X) Cd1 -- O4_b .. 27.42 su
Alert level C Value of measurement temperature given = 293.000 Value of melting point given = 0.000 PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.97 PLAT220_ALERT_2_C Large Non-Solvent C Ueq(max)/Ueq(min) ... 3.11 Ratio PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C1 - C6 ... 1.53 Ang. PLAT154_ALERT_1_C The su's on the Cell Angles are Equal (x 10000) 100 Deg.
Alert level G PLAT333_ALERT_2_G Check Large Av C6-Ring C-C Dist. C11 -C18 1.42 Ang. PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 8 PLAT180_ALERT_4_G Check Cell Rounding: # of Values Ending with 0 = 3 PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 8
0 ALERT level A = In general: serious problem 3 ALERT level B = Potentially serious problem 4 ALERT level C = Check and explain 6 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 6 ALERT type 2 Indicator that the structure model may be wrong or deficient 2 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
CdO (0.05 mmol), 1,10-phenanthroline (0.05 mmol) and pyridine 2,3-dicarboxylic acid (0.10 mmol) were added into 1 ml water and stirred for 5 min in air, then transferred to a closed container. After reacting at 353 K for 7 days, the mixture was cooled to room temperature at a rate of 5 K/h. Colorless crystals suitable for X-ray analysis were obtained.
All H atoms attached to C atoms of were fixed geometrically and treated as riding with C—H = 0.93 Å with Uiso(H) = 1.5Ueq(parent atom). Hydrogen atoms of water molecules were located in difference Fourier maps and included in the subsequent refinement using restraints (O—H = 0.85 (1) Å) with Uiso(H) = 1.5Ueq(O). The two hydrogen atoms were statistically distributed over two positions each (H2W2 and H3W2, H2W3 and H3W3) with occupation factors of 0.50.
Data collection: SMART (Bruker, 2001); cell refinement: SMART (Bruker, 2001); data reduction: SAINT (Bruker, 2001); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 1999); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
[Cd(C7H3NO4)(C12H8N2)(H2O)]·2H2O | Z = 2 |
Mr = 511.76 | F(000) = 512 |
Triclinic, P1 | Dx = 1.795 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.8154 (5) Å | Cell parameters from 4951 reflections |
b = 10.5854 (7) Å | θ = 2.3–29.6° |
c = 13.0681 (8) Å | µ = 1.20 mm−1 |
α = 70.934 (1)° | T = 293 K |
β = 77.940 (1)° | Rod-like, colorless |
γ = 68.698 (1)° | 0.40 × 0.16 × 0.15 mm |
V = 946.98 (10) Å3 |
Bruker SMART CCD area-detector diffractometer | 4194 independent reflections |
Radiation source: fine-focus sealed tube | 3979 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.012 |
ϕ and ω scans | θmax = 27.5°, θmin = 2.9° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −10→10 |
Tmin = 0.645, Tmax = 0.840 | k = −13→13 |
6124 measured reflections | l = −16→14 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.019 | H-atom parameters constrained |
wR(F2) = 0.048 | w = 1/[σ2(Fo2) + (0.0181P)2 + 0.4298P] where P = (Fo2 + 2Fc2)/3 |
S = 1.08 | (Δ/σ)max = 0.001 |
4194 reflections | Δρmax = 0.28 e Å−3 |
272 parameters | Δρmin = −0.27 e Å−3 |
8 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0051 (5) |
[Cd(C7H3NO4)(C12H8N2)(H2O)]·2H2O | γ = 68.698 (1)° |
Mr = 511.76 | V = 946.98 (10) Å3 |
Triclinic, P1 | Z = 2 |
a = 7.8154 (5) Å | Mo Kα radiation |
b = 10.5854 (7) Å | µ = 1.20 mm−1 |
c = 13.0681 (8) Å | T = 293 K |
α = 70.934 (1)° | 0.40 × 0.16 × 0.15 mm |
β = 77.940 (1)° |
Bruker SMART CCD area-detector diffractometer | 4194 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 3979 reflections with I > 2σ(I) |
Tmin = 0.645, Tmax = 0.840 | Rint = 0.012 |
6124 measured reflections |
R[F2 > 2σ(F2)] = 0.019 | 8 restraints |
wR(F2) = 0.048 | H-atom parameters constrained |
S = 1.08 | Δρmax = 0.28 e Å−3 |
4194 reflections | Δρmin = −0.27 e Å−3 |
272 parameters |
Experimental. Elemental analysis. Cacld. for C19H17CdN3O7: C, 44.55; H, 3.35; N, 8.21; Found: C, 44.05; H, 3.44; N, 8.53. |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | Occ. (<1) | |
Cd1 | 0.351199 (16) | 0.150242 (13) | 0.791379 (10) | 0.02558 (5) | |
O1 | 0.03910 (18) | 0.25289 (13) | 0.83701 (12) | 0.0341 (3) | |
O1W | 0.3973 (2) | 0.23034 (15) | 0.92673 (11) | 0.0386 (3) | |
H1W1 | 0.3765 | 0.1750 | 0.9897 | 0.046* | |
H2W1 | 0.5091 | 0.2167 | 0.9178 | 0.046* | |
O2 | −0.23661 (17) | 0.22382 (14) | 0.87797 (12) | 0.0347 (3) | |
O3 | −0.39081 (19) | −0.04132 (16) | 0.87081 (13) | 0.0444 (4) | |
O4 | −0.3121 (2) | 0.10668 (15) | 0.72263 (12) | 0.0431 (3) | |
N1 | 0.2029 (2) | −0.02383 (15) | 0.85619 (12) | 0.0271 (3) | |
N2 | 0.2943 (2) | 0.15794 (18) | 0.61441 (14) | 0.0370 (4) | |
N3 | 0.3212 (2) | 0.37684 (16) | 0.67259 (13) | 0.0325 (3) | |
C1 | 0.0212 (2) | 0.03040 (17) | 0.84658 (13) | 0.0228 (3) | |
C2 | −0.0784 (2) | −0.04976 (17) | 0.83637 (13) | 0.0242 (3) | |
C3 | 0.0120 (3) | −0.19266 (19) | 0.84791 (15) | 0.0311 (4) | |
H3 | −0.0519 | −0.2500 | 0.8448 | 0.037* | |
C4 | 0.1965 (3) | −0.24943 (19) | 0.86391 (16) | 0.0336 (4) | |
H4 | 0.2575 | −0.3455 | 0.8740 | 0.040* | |
C5 | 0.2886 (3) | −0.16083 (19) | 0.86460 (16) | 0.0319 (4) | |
H5 | 0.4147 | −0.1976 | 0.8711 | 0.038* | |
C6 | −0.0676 (2) | 0.18204 (17) | 0.85371 (13) | 0.0240 (3) | |
C7 | −0.2739 (2) | 0.01160 (19) | 0.80796 (15) | 0.0286 (4) | |
C8 | 0.2799 (4) | 0.0538 (3) | 0.5853 (2) | 0.0539 (6) | |
H8 | 0.2953 | −0.0333 | 0.6367 | 0.065* | |
C9 | 0.2429 (4) | 0.0683 (4) | 0.4814 (2) | 0.0711 (8) | |
H9 | 0.2360 | −0.0079 | 0.4638 | 0.085* | |
C10 | 0.2171 (4) | 0.1952 (4) | 0.4069 (2) | 0.0715 (9) | |
H10 | 0.1922 | 0.2067 | 0.3373 | 0.086* | |
C11 | 0.2277 (3) | 0.3097 (3) | 0.43373 (18) | 0.0540 (6) | |
C12 | 0.2682 (3) | 0.2858 (2) | 0.54009 (15) | 0.0371 (4) | |
C13 | 0.2814 (3) | 0.4003 (2) | 0.57072 (15) | 0.0353 (4) | |
C14 | 0.2530 (3) | 0.5338 (2) | 0.49409 (18) | 0.0483 (6) | |
C15 | 0.2690 (4) | 0.6423 (2) | 0.5264 (2) | 0.0581 (7) | |
H15 | 0.2527 | 0.7313 | 0.4776 | 0.070* | |
C16 | 0.3084 (4) | 0.6176 (2) | 0.6286 (2) | 0.0572 (7) | |
H16 | 0.3187 | 0.6892 | 0.6509 | 0.069* | |
C17 | 0.3331 (3) | 0.4828 (2) | 0.70002 (19) | 0.0446 (5) | |
H17 | 0.3592 | 0.4667 | 0.7703 | 0.054* | |
C18 | 0.1968 (4) | 0.4480 (4) | 0.3597 (2) | 0.0708 (9) | |
H18 | 0.1669 | 0.4643 | 0.2903 | 0.085* | |
C19 | 0.2102 (4) | 0.5535 (4) | 0.3882 (2) | 0.0674 (8) | |
H19 | 0.1912 | 0.6418 | 0.3380 | 0.081* | |
O2W | 0.3981 (2) | 0.49790 (17) | 0.09955 (14) | 0.0559 (4) | |
H2W2 | 0.3059 | 0.4845 | 0.0842 | 0.067* | 0.50 |
H1W2 | 0.3589 | 0.5781 | 0.1080 | 0.067* | |
H3W2 | 0.4562 | 0.5171 | 0.0376 | 0.067* | 0.50 |
O3W | 0.0437 (3) | 0.49496 (17) | 0.09995 (15) | 0.0593 (5) | |
H1W3 | −0.0028 | 0.5736 | 0.1119 | 0.071* | |
H2W3 | −0.0031 | 0.4996 | 0.0465 | 0.071* | 0.50 |
H3W3 | 0.1599 | 0.4814 | 0.0833 | 0.071* | 0.50 |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.02151 (8) | 0.02702 (8) | 0.02817 (8) | −0.00974 (5) | −0.00549 (5) | −0.00348 (5) |
O1 | 0.0248 (7) | 0.0268 (6) | 0.0536 (8) | −0.0105 (5) | −0.0005 (6) | −0.0146 (6) |
O1W | 0.0330 (7) | 0.0508 (8) | 0.0362 (7) | −0.0193 (6) | −0.0036 (6) | −0.0105 (6) |
O2 | 0.0216 (7) | 0.0326 (7) | 0.0505 (8) | −0.0084 (5) | 0.0026 (6) | −0.0164 (6) |
O3 | 0.0263 (7) | 0.0505 (9) | 0.0554 (9) | −0.0196 (7) | −0.0050 (6) | −0.0044 (7) |
O4 | 0.0384 (8) | 0.0416 (8) | 0.0443 (8) | −0.0102 (7) | −0.0183 (6) | 0.0002 (6) |
N1 | 0.0205 (7) | 0.0260 (7) | 0.0348 (8) | −0.0076 (6) | −0.0066 (6) | −0.0058 (6) |
N2 | 0.0356 (9) | 0.0441 (9) | 0.0339 (9) | −0.0136 (7) | −0.0041 (7) | −0.0127 (7) |
N3 | 0.0307 (8) | 0.0316 (8) | 0.0301 (8) | −0.0100 (7) | 0.0001 (6) | −0.0041 (6) |
C1 | 0.0217 (8) | 0.0235 (8) | 0.0225 (8) | −0.0084 (6) | −0.0024 (6) | −0.0037 (6) |
C2 | 0.0229 (8) | 0.0242 (8) | 0.0252 (8) | −0.0087 (7) | −0.0041 (6) | −0.0040 (6) |
C3 | 0.0324 (10) | 0.0255 (8) | 0.0387 (10) | −0.0129 (7) | −0.0085 (8) | −0.0057 (7) |
C4 | 0.0336 (10) | 0.0225 (8) | 0.0405 (10) | −0.0038 (7) | −0.0093 (8) | −0.0058 (7) |
C5 | 0.0233 (9) | 0.0284 (9) | 0.0404 (10) | −0.0038 (7) | −0.0097 (7) | −0.0057 (8) |
C6 | 0.0240 (8) | 0.0245 (8) | 0.0243 (8) | −0.0090 (7) | −0.0039 (6) | −0.0053 (6) |
C7 | 0.0241 (9) | 0.0285 (9) | 0.0380 (10) | −0.0088 (7) | −0.0069 (7) | −0.0126 (7) |
C8 | 0.0603 (16) | 0.0619 (15) | 0.0513 (14) | −0.0235 (13) | −0.0057 (11) | −0.0264 (12) |
C9 | 0.078 (2) | 0.097 (2) | 0.0637 (18) | −0.0357 (18) | −0.0071 (15) | −0.0462 (18) |
C10 | 0.0657 (18) | 0.123 (3) | 0.0417 (14) | −0.0371 (18) | −0.0068 (13) | −0.0351 (17) |
C11 | 0.0397 (13) | 0.0903 (19) | 0.0300 (11) | −0.0203 (12) | −0.0050 (9) | −0.0136 (12) |
C12 | 0.0250 (9) | 0.0547 (12) | 0.0268 (9) | −0.0103 (9) | −0.0025 (7) | −0.0077 (8) |
C13 | 0.0230 (9) | 0.0405 (10) | 0.0294 (9) | −0.0057 (8) | 0.0011 (7) | −0.0003 (8) |
C14 | 0.0336 (11) | 0.0488 (13) | 0.0380 (11) | −0.0065 (10) | 0.0012 (9) | 0.0092 (9) |
C15 | 0.0528 (15) | 0.0359 (12) | 0.0580 (15) | −0.0093 (11) | 0.0093 (12) | 0.0082 (10) |
C16 | 0.0682 (17) | 0.0346 (11) | 0.0593 (15) | −0.0195 (11) | 0.0141 (13) | −0.0098 (11) |
C17 | 0.0519 (14) | 0.0382 (11) | 0.0418 (12) | −0.0191 (10) | 0.0054 (10) | −0.0093 (9) |
C18 | 0.0593 (17) | 0.111 (3) | 0.0266 (11) | −0.0262 (17) | −0.0137 (11) | 0.0059 (14) |
C19 | 0.0535 (16) | 0.080 (2) | 0.0391 (13) | −0.0158 (14) | −0.0086 (11) | 0.0176 (13) |
O2W | 0.0545 (10) | 0.0439 (9) | 0.0604 (11) | −0.0030 (8) | −0.0024 (8) | −0.0191 (8) |
O3W | 0.0714 (12) | 0.0408 (9) | 0.0740 (12) | −0.0219 (8) | −0.0031 (10) | −0.0247 (8) |
Cd1—O1 | 2.3185 (13) | C4—H4 | 0.9300 |
Cd1—O1W | 2.3336 (14) | C5—H5 | 0.9300 |
Cd1—N3 | 2.3513 (15) | C8—C9 | 1.395 (4) |
Cd1—N1 | 2.3616 (14) | C8—H8 | 0.9300 |
Cd1—O3i | 2.4049 (15) | C9—C10 | 1.351 (5) |
Cd1—N2 | 2.4151 (16) | C9—H9 | 0.9300 |
Cd1—O4i | 2.5189 (16) | C10—C11 | 1.400 (4) |
O1—C6 | 1.256 (2) | C10—H10 | 0.9300 |
O1W—H1W1 | 0.8630 | C11—C12 | 1.411 (3) |
O1W—H2W1 | 0.8216 | C11—C18 | 1.433 (4) |
O2—C6 | 1.238 (2) | C12—C13 | 1.437 (3) |
O3—C7 | 1.257 (2) | C13—C14 | 1.410 (3) |
O3—Cd1ii | 2.4049 (15) | C14—C15 | 1.399 (4) |
O4—C7 | 1.238 (2) | C14—C19 | 1.422 (4) |
O4—Cd1ii | 2.5189 (16) | C15—C16 | 1.353 (4) |
N1—C5 | 1.336 (2) | C15—H15 | 0.9300 |
N1—C1 | 1.341 (2) | C16—C17 | 1.396 (3) |
N2—C8 | 1.324 (3) | C16—H16 | 0.9300 |
N2—C12 | 1.356 (3) | C17—H17 | 0.9300 |
N3—C17 | 1.322 (3) | C18—C19 | 1.331 (5) |
N3—C13 | 1.353 (3) | C18—H18 | 0.9300 |
C1—C2 | 1.393 (2) | C19—H19 | 0.9300 |
C1—C6 | 1.526 (2) | O2W—H2W2 | 0.8556 |
C2—C3 | 1.389 (2) | O2W—H1W2 | 0.8277 |
C2—C7 | 1.501 (2) | O2W—H3W2 | 0.8415 |
C3—C4 | 1.377 (3) | O3W—H1W3 | 0.8306 |
C3—H3 | 0.9300 | O3W—H2W3 | 0.8344 |
C4—C5 | 1.377 (3) | O3W—H3W3 | 0.8577 |
O1—Cd1—O1W | 85.50 (5) | C4—C5—H5 | 118.9 |
O1—Cd1—N3 | 82.48 (5) | O2—C6—O1 | 125.52 (16) |
O1W—Cd1—N3 | 87.94 (5) | O2—C6—C1 | 117.87 (15) |
O1—Cd1—N1 | 70.02 (5) | O1—C6—C1 | 116.58 (15) |
O1W—Cd1—N1 | 114.38 (5) | O4—C7—O3 | 122.84 (17) |
N3—Cd1—N1 | 142.12 (5) | O4—C7—C2 | 119.52 (17) |
O1—Cd1—O3i | 139.09 (5) | O3—C7—C2 | 117.56 (16) |
O1W—Cd1—O3i | 78.30 (5) | N2—C8—C9 | 123.3 (3) |
N3—Cd1—O3i | 133.35 (5) | N2—C8—H8 | 118.4 |
N1—Cd1—O3i | 82.89 (5) | C9—C8—H8 | 118.4 |
O1—Cd1—N2 | 91.39 (5) | C10—C9—C8 | 118.7 (3) |
O1W—Cd1—N2 | 158.39 (6) | C10—C9—H9 | 120.6 |
N3—Cd1—N2 | 70.46 (6) | C8—C9—H9 | 120.6 |
N1—Cd1—N2 | 84.31 (6) | C9—C10—C11 | 120.5 (2) |
O3i—Cd1—N2 | 116.44 (6) | C9—C10—H10 | 119.8 |
O1—Cd1—O4i | 164.61 (5) | C11—C10—H10 | 119.8 |
O1W—Cd1—O4i | 88.95 (5) | C10—C11—C12 | 117.3 (2) |
N3—Cd1—O4i | 82.98 (5) | C10—C11—C18 | 123.3 (2) |
N1—Cd1—O4i | 125.23 (5) | C12—C11—C18 | 119.3 (3) |
O3i—Cd1—O4i | 52.80 (5) | N2—C12—C11 | 121.9 (2) |
N2—Cd1—O4i | 88.50 (5) | N2—C12—C13 | 119.02 (17) |
C6—O1—Cd1 | 118.77 (11) | C11—C12—C13 | 119.1 (2) |
Cd1—O1W—H1W1 | 109.3 | N3—C13—C14 | 121.7 (2) |
Cd1—O1W—H2W1 | 103.1 | N3—C13—C12 | 118.94 (17) |
H1W1—O1W—H2W1 | 105.8 | C14—C13—C12 | 119.32 (19) |
C7—O3—Cd1ii | 93.36 (11) | C15—C14—C13 | 117.7 (2) |
C7—O4—Cd1ii | 88.54 (12) | C15—C14—C19 | 122.6 (2) |
C5—N1—C1 | 119.41 (15) | C13—C14—C19 | 119.7 (3) |
C5—N1—Cd1 | 124.26 (12) | C16—C15—C14 | 119.9 (2) |
C1—N1—Cd1 | 112.35 (11) | C16—C15—H15 | 120.0 |
C8—N2—C12 | 118.31 (19) | C14—C15—H15 | 120.0 |
C8—N2—Cd1 | 127.04 (16) | C15—C16—C17 | 118.9 (2) |
C12—N2—Cd1 | 114.59 (13) | C15—C16—H16 | 120.5 |
C17—N3—C13 | 118.51 (18) | C17—C16—H16 | 120.5 |
C17—N3—Cd1 | 124.53 (14) | N3—C17—C16 | 123.2 (2) |
C13—N3—Cd1 | 116.90 (13) | N3—C17—H17 | 118.4 |
N1—C1—C2 | 121.67 (15) | C16—C17—H17 | 118.4 |
N1—C1—C6 | 115.02 (14) | C19—C18—C11 | 121.4 (2) |
C2—C1—C6 | 123.23 (15) | C19—C18—H18 | 119.3 |
C3—C2—C1 | 117.80 (16) | C11—C18—H18 | 119.3 |
C3—C2—C7 | 118.66 (15) | C18—C19—C14 | 121.2 (2) |
C1—C2—C7 | 123.46 (15) | C18—C19—H19 | 119.4 |
C4—C3—C2 | 120.00 (17) | C14—C19—H19 | 119.4 |
C4—C3—H3 | 120.0 | H2W2—O2W—H1W2 | 105.8 |
C2—C3—H3 | 120.0 | H2W2—O2W—H3W2 | 101.4 |
C3—C4—C5 | 118.55 (16) | H1W2—O2W—H3W2 | 97.7 |
C3—C4—H4 | 120.7 | H1W3—O3W—H2W3 | 106.6 |
C5—C4—H4 | 120.7 | H1W3—O3W—H3W3 | 107.2 |
N1—C5—C4 | 122.22 (17) | H2W3—O3W—H3W3 | 109.5 |
N1—C5—H5 | 118.9 | ||
O1W—Cd1—O1—C6 | −131.03 (14) | Cd1—N1—C5—C4 | −155.90 (15) |
N3—Cd1—O1—C6 | 140.47 (14) | C3—C4—C5—N1 | 3.7 (3) |
N1—Cd1—O1—C6 | −13.05 (13) | Cd1—O1—C6—O2 | −179.59 (14) |
O3i—Cd1—O1—C6 | −64.70 (16) | Cd1—O1—C6—C1 | 2.4 (2) |
N2—Cd1—O1—C6 | 70.38 (14) | N1—C1—C6—O2 | −158.83 (16) |
O4i—Cd1—O1—C6 | 159.78 (16) | C2—C1—C6—O2 | 18.1 (2) |
O1—Cd1—N1—C5 | 179.92 (16) | N1—C1—C6—O1 | 19.4 (2) |
O1W—Cd1—N1—C5 | −104.93 (15) | C2—C1—C6—O1 | −163.76 (16) |
N3—Cd1—N1—C5 | 133.86 (14) | Cd1ii—O4—C7—O3 | 15.87 (19) |
O3i—Cd1—N1—C5 | −31.25 (15) | Cd1ii—O4—C7—C2 | −167.34 (15) |
N2—Cd1—N1—C5 | 86.36 (15) | Cd1ii—O3—C7—O4 | −16.7 (2) |
O4i—Cd1—N1—C5 | 2.24 (17) | Cd1ii—O3—C7—C2 | 166.48 (13) |
O1—Cd1—N1—C1 | 22.61 (11) | C3—C2—C7—O4 | −119.5 (2) |
O1W—Cd1—N1—C1 | 97.76 (12) | C1—C2—C7—O4 | 57.2 (3) |
N3—Cd1—N1—C1 | −23.44 (17) | C3—C2—C7—O3 | 57.5 (2) |
O3i—Cd1—N1—C1 | 171.45 (13) | C1—C2—C7—O3 | −125.86 (19) |
N2—Cd1—N1—C1 | −70.95 (12) | C12—N2—C8—C9 | 1.3 (4) |
O4i—Cd1—N1—C1 | −155.06 (11) | Cd1—N2—C8—C9 | 178.6 (2) |
O1—Cd1—N2—C8 | −98.04 (19) | N2—C8—C9—C10 | −1.2 (4) |
O1W—Cd1—N2—C8 | −179.31 (17) | C8—C9—C10—C11 | 0.0 (5) |
N3—Cd1—N2—C8 | −179.6 (2) | C9—C10—C11—C12 | 0.8 (4) |
N1—Cd1—N2—C8 | −28.28 (19) | C9—C10—C11—C18 | −178.2 (3) |
O3i—Cd1—N2—C8 | 50.9 (2) | C8—N2—C12—C11 | −0.4 (3) |
O4i—Cd1—N2—C8 | 97.4 (2) | Cd1—N2—C12—C11 | −178.00 (16) |
O1—Cd1—N2—C12 | 79.33 (14) | C8—N2—C12—C13 | 179.3 (2) |
O1W—Cd1—N2—C12 | −1.9 (2) | Cd1—N2—C12—C13 | 1.7 (2) |
N3—Cd1—N2—C12 | −2.19 (13) | C10—C11—C12—N2 | −0.6 (3) |
N1—Cd1—N2—C12 | 149.10 (14) | C18—C11—C12—N2 | 178.4 (2) |
O3i—Cd1—N2—C12 | −131.76 (13) | C10—C11—C12—C13 | 179.6 (2) |
O4i—Cd1—N2—C12 | −85.28 (14) | C18—C11—C12—C13 | −1.3 (3) |
O1—Cd1—N3—C17 | 85.52 (17) | C17—N3—C13—C14 | 0.1 (3) |
O1W—Cd1—N3—C17 | −0.21 (17) | Cd1—N3—C13—C14 | 177.42 (15) |
N1—Cd1—N3—C17 | 128.57 (16) | C17—N3—C13—C12 | 179.96 (18) |
O3i—Cd1—N3—C17 | −71.96 (19) | Cd1—N3—C13—C12 | −2.7 (2) |
N2—Cd1—N3—C17 | 179.69 (18) | N2—C12—C13—N3 | 0.6 (3) |
O4i—Cd1—N3—C17 | −89.41 (17) | C11—C12—C13—N3 | −179.66 (18) |
O1—Cd1—N3—C13 | −91.62 (13) | N2—C12—C13—C14 | −179.52 (18) |
O1W—Cd1—N3—C13 | −177.35 (13) | C11—C12—C13—C14 | 0.2 (3) |
N1—Cd1—N3—C13 | −48.57 (17) | N3—C13—C14—C15 | 0.6 (3) |
O3i—Cd1—N3—C13 | 110.90 (14) | C12—C13—C14—C15 | −179.3 (2) |
N2—Cd1—N3—C13 | 2.56 (13) | N3—C13—C14—C19 | −179.6 (2) |
O4i—Cd1—N3—C13 | 93.46 (13) | C12—C13—C14—C19 | 0.6 (3) |
C5—N1—C1—C2 | −5.2 (3) | C13—C14—C15—C16 | −0.8 (4) |
Cd1—N1—C1—C2 | 153.32 (13) | C19—C14—C15—C16 | 179.4 (2) |
C5—N1—C1—C6 | 171.73 (16) | C14—C15—C16—C17 | 0.3 (4) |
Cd1—N1—C1—C6 | −29.74 (17) | C13—N3—C17—C16 | −0.6 (3) |
N1—C1—C2—C3 | 6.6 (3) | Cd1—N3—C17—C16 | −177.74 (18) |
C6—C1—C2—C3 | −170.04 (16) | C15—C16—C17—N3 | 0.5 (4) |
N1—C1—C2—C7 | −170.04 (16) | C10—C11—C18—C19 | −179.3 (3) |
C6—C1—C2—C7 | 13.3 (3) | C12—C11—C18—C19 | 1.7 (4) |
C1—C2—C3—C4 | −2.9 (3) | C11—C18—C19—C14 | −1.0 (4) |
C7—C2—C3—C4 | 173.96 (17) | C15—C14—C19—C18 | 179.6 (3) |
C2—C3—C4—C5 | −2.0 (3) | C13—C14—C19—C18 | −0.2 (4) |
C1—N1—C5—C4 | −0.1 (3) |
Symmetry codes: (i) x+1, y, z; (ii) x−1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3W—H3W3···O2W | 0.86 | 1.99 | 2.780 (3) | 152 |
O3W—H2W3···O3Wiii | 0.83 | 1.98 | 2.795 (4) | 164 |
O3W—H1W3···O1iv | 0.83 | 2.06 | 2.860 (2) | 161 |
O2W—H1W2···O2iv | 0.83 | 2.02 | 2.840 (2) | 173 |
O2W—H3W2···O2Wv | 0.84 | 1.93 | 2.748 (3) | 163 |
O2W—H2W2···O3W | 0.86 | 1.98 | 2.780 (3) | 155 |
O1W—H2W1···O2i | 0.82 | 1.97 | 2.7784 (19) | 168 |
O1W—H1W1···O3vi | 0.86 | 1.90 | 2.751 (2) | 167 |
Symmetry codes: (i) x+1, y, z; (iii) −x, −y+1, −z; (iv) −x, −y+1, −z+1; (v) −x+1, −y+1, −z; (vi) −x, −y, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C7H3NO4)(C12H8N2)(H2O)]·2H2O |
Mr | 511.76 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 7.8154 (5), 10.5854 (7), 13.0681 (8) |
α, β, γ (°) | 70.934 (1), 77.940 (1), 68.698 (1) |
V (Å3) | 946.98 (10) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.20 |
Crystal size (mm) | 0.40 × 0.16 × 0.15 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.645, 0.840 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 6124, 4194, 3979 |
Rint | 0.012 |
(sin θ/λ)max (Å−1) | 0.650 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.019, 0.048, 1.08 |
No. of reflections | 4194 |
No. of parameters | 272 |
No. of restraints | 8 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.28, −0.27 |
Computer programs: SMART (Bruker, 2001), SAINT (Bruker, 2001), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) and DIAMOND (Brandenburg, 1999), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
O3W—H3W3···O2W | 0.86 | 1.99 | 2.780 (3) | 152.3 |
O3W—H2W3···O3Wi | 0.83 | 1.98 | 2.795 (4) | 164.1 |
O3W—H1W3···O1ii | 0.83 | 2.06 | 2.860 (2) | 161.4 |
O2W—H1W2···O2ii | 0.83 | 2.02 | 2.840 (2) | 173.4 |
O2W—H3W2···O2Wiii | 0.84 | 1.93 | 2.748 (3) | 162.8 |
O2W—H2W2···O3W | 0.86 | 1.98 | 2.780 (3) | 154.7 |
O1W—H2W1···O2iv | 0.82 | 1.97 | 2.7784 (19) | 168.4 |
O1W—H1W1···O3v | 0.86 | 1.90 | 2.751 (2) | 166.7 |
Symmetry codes: (i) −x, −y+1, −z; (ii) −x, −y+1, −z+1; (iii) −x+1, −y+1, −z; (iv) x+1, y, z; (v) −x, −y, −z+2. |
Metal-organic coordination polymers have been of great interest due to their intriguing potential applications, such as catalysis, magnetism, electronic and chemical separation (Moulton & Zaworotko, 2001). Multidentate N– or O-donor ligands, such as pyridine- or imidazole- (di)carboxylic acids, have drawn extensive attention in the construction of coordination polymers or metal-organic formworks (MOF). For example, pyridine or imidazole dicarboxyic acid ligands, including pyridine-2,6-, 2,5- or 3,4-dicarboxylic and imidazole-3,4-dicarboxylic acids, have been extensively employed in the construction of such metal-organic formworks. Comparing with other pyridine-dicarboxylic acids, pyridine-2,3-dicarboxylic acid (2,3-pydc) has been rarely used as a linkage ligand (Gutschke et al., 1995; Yu et al., 2004; Li et al., 2006). We have synthesized a novel one-dimensional (one-dimensional) coordination polymer based on 2,3-pydc, [Cd(2,3-pydc)(H2O)(phen).2H2O]n (phen = 1,10-phenanthroline), (I), the crystal structure of which is presented in this article.
The title complex is a one-dimensional chain-like coordination polymer. In the structure of the title compound (Fig. 1), the Cd ion is seven-coordinated with two N atoms from phen, one N and three O atoms from two different pyridine-2,3-dicarboxylate and a water molecule. The 2,3-pydc affords four coordination atoms to connect two Cd ions, one as chelating bidentate through the N atom and one O atom of carboxylate in 2-position, the other with two O atoms of carboxylate in 3-position. Thus, complex (I) illustrates a one-dimensional chain structure along a axis, as shown in Fig. 2. Two adjacent chains band together by a series of hydrogen bonds involving water and carbonyl O-atoms (details are given in Table 1), π-π interaction of 1,10-phenanthroline with the shortest distance between the centroids of C11—C14/C18/C19 rings being 3.560 (2) Å and the shortest distance between the centroids of N3/C13—C17 rings are 3.666 (2) Å, thus resulting in a two-dimensional supramolecular structure. The structure also displays a short C6—O2···π(Cg(1)) interaction with a perpendicular distance between O2 and the centroid of Cg(1) being 3.562 (2) Å.
It is also worthwhile to note that there is a C4 water chain in (I), whose repeating unit contains four water molecules with O—O distances 2.750 (4) 2.782 (3), and 2.798 (4) Å (average distance = 2.777 Å), which are all close to the corresponding distance of O—O in the ice Ic (2.75 Å) and Ih (2.759 Å) determined at 143 and 183 K, respectively (Eisenberg & Kauzmann, 1969). Moreover, each water molecule links to the host by the H-bonding interaction between water of hydration and coordination water molecules. Water molecule can participate in four hydrogen bonds in a tetrahedral arrangement with two hydrogen atoms and two lone pairs, but also frequently show 3-coordinate configurations, just as in (I).