




Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536811045648/pv2471sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536811045648/pv2471Isup2.hkl |
![]() | Chemical Markup Language (CML) file https://doi.org/10.1107/S1600536811045648/pv2471Isup3.cml |
CCDC reference: 858295
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean
(C-C) = 0.003 Å
- R factor = 0.045
- wR factor = 0.112
- Data-to-parameter ratio = 11.7
checkCIF/PLATON results
No syntax errors found Datablock: I
Alert level C DIFMX01_ALERT_2_C The maximum difference density is > 0.1*ZMAX*0.75 _refine_diff_density_max given = 0.664 Test value = 0.600 DIFMX02_ALERT_1_C The maximum difference density is > 0.1*ZMAX*0.75 The relevant atom site should be identified. PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.974 PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.39 PLAT097_ALERT_2_C Large Reported Max. (Positive) Residual Density 0.66 eA-3 PLAT230_ALERT_2_C Hirshfeld Test Diff for O1 -- C1 .. 5.2 su PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 59
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 5 PLAT003_ALERT_2_G Number of Uiso or Uij Restrained Atom Sites .... 2 PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 4 PLAT909_ALERT_3_G Percentage of Observed Data at Theta(Max) still 72 Perc.
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 8 ALERT level C = Check. Ensure it is not caused by an omission or oversight 4 ALERT level G = General information/check it is not something unexpected 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 6 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 0 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of vanillin (1.52 g, 0.1 mol) and nicotinamide (1.22 g, 0.1 mol) in ethanol (30 ml) was heated for 1 hr. The solvent was then evaporated partially and the solution was left at room temperature. The colorless crystals of the title compound were obtained in a day.
The C-bound H atoms were placed at calculated positions and were treated as riding on their parent C atoms with C—H distances of 0.95 (aryl) and 0.98 (methyl) Å. The N– and O-bound H atoms were located in a difference Fourier map, and refined with distance restraints of O—H = 0.84 (2) Å and N—H = 0.88 (2) Å. For all H atoms, Uiso(H) was set to 1.2–1.5eq(carrier atom). An additional rigid-bond type restraint (DELU in SHELXL97) was placed on the displacement parameters of C1 and C2.
The crystal structures of nicotinamide (Miwa et al.,1999; Li et al., 2011) and 4-hydroxy-3-methoxybenzaldehyde, vanillin, (Velavan et al.,1995) have been previously reported. The title compound is an equimolar cocrystal of nicotinamide and vanillin (Fig. 1). The nicotinamide aromatic ring and the plane of the amide fragment, N1—C9—O4, are twisted with respect to each other, making a dihedral angle of 32.6 (2)°. The vanillin molecule is essentially planar, the highest deviation from the best plane passing through all non-H atoms being 0.0156 (13) Å for O3 atom. In the crystal, the molecules of nicotinamide and vanillin are linked through N—H···O and O—H···N hydrogen bonds into infinite chains along the a axis (Fig. 2). The chains are connected via C—H···O interactions (Table 1 and Fig. 2) to form a three-dimensional polymeric structure.
For the crystal structure of nicotinamide, see: Miwa et al. (1999); Li et al. (2011). For the structure of vanillin, see: Velavan et al. (1995).
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: X-SEED (Barbour, 2001); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
C6H6N2O·C8H8O3 | Z = 2 |
Mr = 274.27 | F(000) = 288 |
Triclinic, P1 | Dx = 1.429 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 4.8979 (1) Å | Cell parameters from 1226 reflections |
b = 8.5440 (2) Å | θ = 2.6–29.7° |
c = 15.4713 (4) Å | µ = 0.11 mm−1 |
α = 98.108 (1)° | T = 100 K |
β = 92.810 (2)° | Lath, colorless |
γ = 94.784 (2)° | 0.22 × 0.14 × 0.04 mm |
V = 637.52 (3) Å3 |
Bruker APEXII CCD diffractometer | 2243 independent reflections |
Radiation source: fine-focus sealed tube | 1862 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.019 |
φ and ω scans | θmax = 25.3°, θmin = 2.4° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | h = −5→5 |
Tmin = 0.977, Tmax = 0.996 | k = −10→10 |
3432 measured reflections | l = −18→18 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.045 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | w = 1/[σ2(Fo2) + (0.0439P)2 + 0.4685P] where P = (Fo2 + 2Fc2)/3 |
2243 reflections | (Δ/σ)max < 0.001 |
191 parameters | Δρmax = 0.66 e Å−3 |
4 restraints | Δρmin = −0.28 e Å−3 |
C6H6N2O·C8H8O3 | γ = 94.784 (2)° |
Mr = 274.27 | V = 637.52 (3) Å3 |
Triclinic, P1 | Z = 2 |
a = 4.8979 (1) Å | Mo Kα radiation |
b = 8.5440 (2) Å | µ = 0.11 mm−1 |
c = 15.4713 (4) Å | T = 100 K |
α = 98.108 (1)° | 0.22 × 0.14 × 0.04 mm |
β = 92.810 (2)° |
Bruker APEXII CCD diffractometer | 2243 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1996) | 1862 reflections with I > 2σ(I) |
Tmin = 0.977, Tmax = 0.996 | Rint = 0.019 |
3432 measured reflections |
R[F2 > 2σ(F2)] = 0.045 | 4 restraints |
wR(F2) = 0.112 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.05 | Δρmax = 0.66 e Å−3 |
2243 reflections | Δρmin = −0.28 e Å−3 |
191 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.3651 (3) | 0.83011 (19) | 0.61085 (10) | 0.0359 (4) | |
O2 | 0.8107 (3) | 0.63328 (16) | 0.23075 (9) | 0.0195 (3) | |
H2 | 0.949 (4) | 0.698 (2) | 0.2250 (15) | 0.029* | |
O3 | 0.4028 (3) | 0.44026 (16) | 0.25734 (9) | 0.0218 (3) | |
C1 | 0.3070 (5) | 0.7306 (3) | 0.54863 (14) | 0.0286 (5) | |
H1 | 0.1529 | 0.6570 | 0.5522 | 0.034* | |
C2 | 0.4516 (4) | 0.7113 (2) | 0.46701 (13) | 0.0210 (4) | |
C3 | 0.6726 (4) | 0.8148 (2) | 0.45164 (13) | 0.0221 (5) | |
H3 | 0.7380 | 0.9016 | 0.4951 | 0.026* | |
C4 | 0.7972 (4) | 0.7912 (2) | 0.37307 (13) | 0.0204 (4) | |
H4 | 0.9482 | 0.8620 | 0.3629 | 0.024* | |
C5 | 0.7035 (4) | 0.6648 (2) | 0.30888 (12) | 0.0166 (4) | |
C6 | 0.4793 (4) | 0.5600 (2) | 0.32443 (12) | 0.0176 (4) | |
C7 | 0.3561 (4) | 0.5847 (2) | 0.40255 (13) | 0.0208 (5) | |
H7 | 0.2040 | 0.5146 | 0.4128 | 0.025* | |
C8 | 0.1709 (4) | 0.3323 (2) | 0.26827 (14) | 0.0217 (5) | |
H8A | 0.2110 | 0.2765 | 0.3179 | 0.033* | |
H8B | 0.1328 | 0.2551 | 0.2150 | 0.033* | |
H8C | 0.0103 | 0.3917 | 0.2793 | 0.033* | |
O4 | 0.8254 (3) | 0.71964 (19) | −0.04761 (9) | 0.0299 (4) | |
N1 | 0.3766 (4) | 0.6341 (2) | −0.07875 (11) | 0.0205 (4) | |
H1A | 0.207 (3) | 0.645 (3) | −0.0672 (14) | 0.025* | |
H1B | 0.415 (4) | 0.586 (2) | −0.1293 (11) | 0.025* | |
N2 | 0.2385 (3) | 0.80224 (19) | 0.18395 (10) | 0.0170 (4) | |
C9 | 0.5840 (4) | 0.7129 (2) | −0.02755 (13) | 0.0197 (4) | |
C10 | 0.5123 (4) | 0.7959 (2) | 0.05932 (12) | 0.0169 (4) | |
C11 | 0.6653 (4) | 0.9350 (2) | 0.09779 (13) | 0.0201 (4) | |
H11 | 0.8121 | 0.9801 | 0.0687 | 0.024* | |
C12 | 0.5998 (4) | 1.0066 (2) | 0.17913 (13) | 0.0220 (5) | |
H12 | 0.6997 | 1.1023 | 0.2066 | 0.026* | |
C13 | 0.3864 (4) | 0.9363 (2) | 0.21971 (13) | 0.0192 (4) | |
H13 | 0.3429 | 0.9856 | 0.2757 | 0.023* | |
C14 | 0.3015 (4) | 0.7346 (2) | 0.10499 (12) | 0.0162 (4) | |
H14 | 0.1966 | 0.6397 | 0.0788 | 0.019* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0440 (10) | 0.0363 (9) | 0.0266 (9) | 0.0056 (8) | 0.0038 (7) | 0.0006 (7) |
O2 | 0.0182 (8) | 0.0217 (7) | 0.0174 (7) | −0.0031 (6) | 0.0053 (6) | 0.0004 (6) |
O3 | 0.0223 (8) | 0.0214 (7) | 0.0198 (7) | −0.0045 (6) | 0.0064 (6) | −0.0016 (6) |
C1 | 0.0356 (13) | 0.0308 (12) | 0.0189 (10) | 0.0104 (10) | −0.0028 (9) | −0.0012 (9) |
C2 | 0.0226 (11) | 0.0246 (11) | 0.0170 (10) | 0.0074 (8) | 0.0004 (8) | 0.0045 (8) |
C3 | 0.0270 (11) | 0.0214 (10) | 0.0165 (10) | 0.0060 (9) | −0.0036 (8) | −0.0020 (8) |
C4 | 0.0187 (10) | 0.0193 (10) | 0.0218 (11) | −0.0018 (8) | −0.0001 (8) | 0.0014 (8) |
C5 | 0.0157 (10) | 0.0209 (10) | 0.0145 (9) | 0.0054 (8) | 0.0026 (8) | 0.0043 (8) |
C6 | 0.0193 (10) | 0.0176 (10) | 0.0157 (10) | 0.0033 (8) | 0.0002 (8) | 0.0007 (8) |
C7 | 0.0193 (11) | 0.0242 (11) | 0.0199 (10) | 0.0020 (8) | 0.0046 (8) | 0.0055 (8) |
C8 | 0.0185 (11) | 0.0198 (10) | 0.0259 (11) | −0.0031 (8) | 0.0035 (8) | 0.0021 (8) |
O4 | 0.0144 (8) | 0.0516 (10) | 0.0228 (8) | 0.0064 (7) | 0.0038 (6) | −0.0003 (7) |
N1 | 0.0172 (9) | 0.0279 (9) | 0.0153 (9) | 0.0046 (7) | 0.0035 (7) | −0.0030 (7) |
N2 | 0.0171 (9) | 0.0194 (8) | 0.0148 (8) | 0.0031 (7) | 0.0012 (6) | 0.0027 (6) |
C9 | 0.0178 (11) | 0.0255 (11) | 0.0168 (10) | 0.0055 (8) | 0.0018 (8) | 0.0042 (8) |
C10 | 0.0144 (10) | 0.0210 (10) | 0.0156 (10) | 0.0038 (8) | −0.0008 (7) | 0.0030 (8) |
C11 | 0.0149 (10) | 0.0240 (10) | 0.0221 (10) | 0.0003 (8) | 0.0020 (8) | 0.0058 (8) |
C12 | 0.0227 (11) | 0.0180 (10) | 0.0234 (11) | −0.0030 (8) | −0.0011 (8) | −0.0002 (8) |
C13 | 0.0217 (11) | 0.0192 (10) | 0.0160 (10) | 0.0031 (8) | 0.0002 (8) | 0.0001 (8) |
C14 | 0.0157 (10) | 0.0162 (9) | 0.0161 (10) | 0.0009 (7) | −0.0013 (8) | 0.0012 (7) |
O1—C1 | 1.197 (3) | C8—H8B | 0.9800 |
O2—C5 | 1.343 (2) | C8—H8C | 0.9800 |
O2—H2 | 0.854 (16) | O4—C9 | 1.236 (2) |
O3—C6 | 1.365 (2) | N1—C9 | 1.330 (3) |
O3—C8 | 1.435 (2) | N1—H1A | 0.868 (16) |
C1—C2 | 1.474 (3) | N1—H1B | 0.869 (16) |
C1—H1 | 0.9500 | N2—C13 | 1.336 (2) |
C2—C3 | 1.391 (3) | N2—C14 | 1.338 (2) |
C2—C7 | 1.396 (3) | C9—C10 | 1.500 (3) |
C3—C4 | 1.384 (3) | C10—C14 | 1.388 (3) |
C3—H3 | 0.9500 | C10—C11 | 1.392 (3) |
C4—C5 | 1.391 (3) | C11—C12 | 1.384 (3) |
C4—H4 | 0.9500 | C11—H11 | 0.9500 |
C5—C6 | 1.410 (3) | C12—C13 | 1.384 (3) |
C6—C7 | 1.375 (3) | C12—H12 | 0.9500 |
C7—H7 | 0.9500 | C13—H13 | 0.9500 |
C8—H8A | 0.9800 | C14—H14 | 0.9500 |
C5—O2—H2 | 112.6 (16) | O3—C8—H8C | 109.5 |
C6—O3—C8 | 117.44 (15) | H8A—C8—H8C | 109.5 |
O1—C1—C2 | 126.2 (2) | H8B—C8—H8C | 109.5 |
O1—C1—H1 | 116.9 | C9—N1—H1A | 121.6 (15) |
C2—C1—H1 | 116.9 | C9—N1—H1B | 117.5 (15) |
C3—C2—C7 | 119.56 (18) | H1A—N1—H1B | 120 (2) |
C3—C2—C1 | 122.83 (19) | C13—N2—C14 | 117.72 (17) |
C7—C2—C1 | 117.59 (19) | O4—C9—N1 | 123.82 (19) |
C4—C3—C2 | 119.93 (19) | O4—C9—C10 | 119.84 (18) |
C4—C3—H3 | 120.0 | N1—C9—C10 | 116.34 (17) |
C2—C3—H3 | 120.0 | C14—C10—C11 | 118.15 (18) |
C3—C4—C5 | 120.68 (18) | C14—C10—C9 | 121.73 (18) |
C3—C4—H4 | 119.7 | C11—C10—C9 | 120.07 (18) |
C5—C4—H4 | 119.7 | C12—C11—C10 | 118.88 (18) |
O2—C5—C4 | 124.72 (18) | C12—C11—H11 | 120.6 |
O2—C5—C6 | 115.90 (17) | C10—C11—H11 | 120.6 |
C4—C5—C6 | 119.38 (18) | C13—C12—C11 | 118.77 (19) |
O3—C6—C7 | 125.62 (18) | C13—C12—H12 | 120.6 |
O3—C6—C5 | 114.82 (17) | C11—C12—H12 | 120.6 |
C7—C6—C5 | 119.56 (18) | N2—C13—C12 | 123.12 (18) |
C6—C7—C2 | 120.88 (19) | N2—C13—H13 | 118.4 |
C6—C7—H7 | 119.6 | C12—C13—H13 | 118.4 |
C2—C7—H7 | 119.6 | N2—C14—C10 | 123.34 (18) |
O3—C8—H8A | 109.5 | N2—C14—H14 | 118.3 |
O3—C8—H8B | 109.5 | C10—C14—H14 | 118.3 |
H8A—C8—H8B | 109.5 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4i | 0.87 (2) | 2.05 (2) | 2.900 (2) | 167 (2) |
N1—H1B···O2ii | 0.87 (2) | 2.42 (2) | 3.085 (2) | 134 (2) |
N1—H1B···O3ii | 0.87 (2) | 2.20 (2) | 3.019 (2) | 156 (2) |
O2—H2···N2iii | 0.85 (2) | 1.80 (2) | 2.634 (2) | 164 (2) |
C8—H8A···O1iv | 0.98 | 2.59 | 3.381 (3) | 137 |
C8—H8C···O2i | 0.98 | 2.55 | 3.337 (2) | 138 |
C13—H13···O1v | 0.95 | 2.49 | 3.185 (3) | 130 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+1, −y+1, −z+1; (v) −x+1, −y+2, −z+1. |
Experimental details
Crystal data | |
Chemical formula | C6H6N2O·C8H8O3 |
Mr | 274.27 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 100 |
a, b, c (Å) | 4.8979 (1), 8.5440 (2), 15.4713 (4) |
α, β, γ (°) | 98.108 (1), 92.810 (2), 94.784 (2) |
V (Å3) | 637.52 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.11 |
Crystal size (mm) | 0.22 × 0.14 × 0.04 |
Data collection | |
Diffractometer | Bruker APEXII CCD |
Absorption correction | Multi-scan (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.977, 0.996 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3432, 2243, 1862 |
Rint | 0.019 |
(sin θ/λ)max (Å−1) | 0.600 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.045, 0.112, 1.05 |
No. of reflections | 2243 |
No. of parameters | 191 |
No. of restraints | 4 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.66, −0.28 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), X-SEED (Barbour, 2001), SHELXL97 (Sheldrick, 2008) and publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O4i | 0.868 (16) | 2.048 (17) | 2.900 (2) | 167 (2) |
N1—H1B···O2ii | 0.869 (16) | 2.416 (19) | 3.085 (2) | 134.2 (18) |
N1—H1B···O3ii | 0.869 (16) | 2.203 (18) | 3.019 (2) | 156 (2) |
O2—H2···N2iii | 0.854 (16) | 1.801 (17) | 2.634 (2) | 164 (2) |
C8—H8A···O1iv | 0.98 | 2.59 | 3.381 (3) | 137.4 |
C8—H8C···O2i | 0.98 | 2.55 | 3.337 (2) | 137.7 |
C13—H13···O1v | 0.95 | 2.49 | 3.185 (3) | 129.9 |
Symmetry codes: (i) x−1, y, z; (ii) −x+1, −y+1, −z; (iii) x+1, y, z; (iv) −x+1, −y+1, −z+1; (v) −x+1, −y+2, −z+1. |
The crystal structures of nicotinamide (Miwa et al.,1999; Li et al., 2011) and 4-hydroxy-3-methoxybenzaldehyde, vanillin, (Velavan et al.,1995) have been previously reported. The title compound is an equimolar cocrystal of nicotinamide and vanillin (Fig. 1). The nicotinamide aromatic ring and the plane of the amide fragment, N1—C9—O4, are twisted with respect to each other, making a dihedral angle of 32.6 (2)°. The vanillin molecule is essentially planar, the highest deviation from the best plane passing through all non-H atoms being 0.0156 (13) Å for O3 atom. In the crystal, the molecules of nicotinamide and vanillin are linked through N—H···O and O—H···N hydrogen bonds into infinite chains along the a axis (Fig. 2). The chains are connected via C—H···O interactions (Table 1 and Fig. 2) to form a three-dimensional polymeric structure.