research papers
The title compound was synthesized in the form of a powder, and was studied by elemental analysis, IR spectroscopy, thermogravimetry and mass spectroscopy. Its crystal structure was then determined by X-ray powder diffractometry, using X-ray diffraction data collected in the reflection Bragg–Brentano geometry. The methodology followed in the present study to resolve the crystal structure consisted of peak indexing, then the use of the Monte-Carlo/parallel tempering search algorithm, and finally Rietveld refinement coupled with difference-Fourier synthesis. We found that the crystals are composed of monoclinic unit cells, with 1.5 molecules in the asymmetric unit and therefore six molecules per unit cell. In addition, we concluded that the complexes adopt a planar conformation, forming trimers created by groups of parallel molecules.
Keywords: X-ray powder diffractometry; IR spectroscopy; thermogravimetry; mass spectroscopy; parallel tempering algorithm.
Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S0108768106044843/ry5007sup1.cif | |
Rietveld powder data file (CIF format) https://doi.org/10.1107/S0108768106044843/ry5007sup2.rtv |
CCDC reference: 637734
Computing details top
Program(s) used to solve structure: FOX; program(s) used to refine structure: FULLPROF.
bis(mu2-hydroxo)-(2-pyridininphenyl)-C,N)palladium top
Crystal data top
C22H18N2O2Pd2 | β = 92.115 (3)° |
Mr = 555.2 | V = 2833.2 (3) Å3 |
Monoclinic, P121/N1 | Z = 6 |
Hall symbol: -P 2yn | Dx = 1.953 Mg m−3 |
a = 15.9574 (10) Å | Cu Kα radiation, λ = 1.54183 Å |
b = 16.1807 (10) Å | T = 298 K |
c = 10.9808 (7) Å | ?, ? × ? × ? mm |
Data collection top
Diffractometer | Scan method: step |
Radiation source: sealed X-ray tube | 2θmin = 4.975°, 2θmax = 99.975°, 2θstep = 0.020° |
C 111 monochromator |
Refinement top
Rp = 9.545 | Profile function: pseudo-Voigt |
Rwp = 12.461 | 76 parameters |
Rexp = 6.098 | 13 restraints |
RBragg = 9.837 | H-atom parameters constrained |
χ2 = 4.176 | |
4751 data points | Background function: Linear Interpolation |
Crystal data top
C22H18N2O2Pd2 | β = 92.115 (3)° |
Mr = 555.2 | V = 2833.2 (3) Å3 |
Monoclinic, P121/N1 | Z = 6 |
a = 15.9574 (10) Å | Cu Kα radiation, λ = 1.54183 Å |
b = 16.1807 (10) Å | T = 298 K |
c = 10.9808 (7) Å | ?, ? × ? × ? mm |
Refinement top
Rp = 9.545 | 4751 data points |
Rwp = 12.461 | 76 parameters |
Rexp = 6.098 | 13 restraints |
RBragg = 9.837 | H-atom parameters constrained |
χ2 = 4.176 |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
x | y | z | Uiso*/Ueq | ||
Pd1 | 0.8460 (4) | −0.0628 (5) | 0.7950 (5) | 0.00000* | |
O1 | 0.855 (2) | −0.151 (2) | 0.929 (3) | 0.00000* | |
N1 | 0.7255 (6) | −0.0368 (8) | 0.8518 (12) | 0.00000* | |
C1 | 0.7976 (6) | 0.0142 (8) | 0.6576 (12) | 0.00000* | |
C7 | 0.6779 (6) | 0.0189 (8) | 0.7865 (12) | 0.00000* | |
C11 | 0.6977 (6) | −0.0663 (8) | 0.9581 (12) | 0.00000* | |
H10 | 0.7311 (6) | −0.1051 (8) | 1.0028 (12) | 0.00000* | |
C8 | 0.6007 (6) | 0.0441 (8) | 0.8280 (12) | 0.00000* | |
H7 | 0.5673 (6) | 0.0821 (8) | 0.7815 (12) | 0.00000* | |
C2 | 0.8395 (6) | 0.0380 (8) | 0.5545 (12) | 0.00000* | |
H3 | 0.8931 (6) | 0.0156 (8) | 0.5400 (12) | 0.00000* | |
C5 | 0.6816 (6) | 0.1040 (8) | 0.5937 (12) | 0.00000* | |
H6 | 0.6277 (6) | 0.1262 (8) | 0.6071 (12) | 0.00000* | |
C9 | 0.5726 (6) | 0.0140 (8) | 0.9368 (12) | 0.00000* | |
H8 | 0.5199 (6) | 0.0310 (8) | 0.9657 (12) | 0.00000* | |
C4 | 0.7246 (6) | 0.1279 (8) | 0.4924 (12) | 0.00000* | |
H5 | 0.7004 (6) | 0.1668 (8) | 0.4367 (12) | 0.00000* | |
C10 | 0.6221 (6) | −0.0418 (8) | 1.0036 (12) | 0.00000* | |
H9 | 0.6043 (6) | −0.0627 (8) | 1.0793 (12) | 0.00000* | |
C3 | 0.8032 (6) | 0.0946 (8) | 0.4724 (12) | 0.00000* | |
H4 | 0.8325 (6) | 0.1105 (8) | 0.4024 (12) | 0.00000* | |
C6 | 0.7175 (6) | 0.0474 (8) | 0.6760 (12) | 0.00000* | |
Pd2 | 0.4657 (5) | 0.7121 (4) | 0.3995 (7) | 0.00000* | |
O2 | 0.4550 (19) | 0.633 (2) | 0.253 (3) | 0.00000* | |
N2 | 0.5588 (8) | 0.7887 (7) | 0.3325 (13) | 0.00000* | |
C12 | 0.4760 (8) | 0.8039 (7) | 0.5303 (13) | 0.00000* | |
C18 | 0.5771 (8) | 0.8602 (7) | 0.3937 (13) | 0.00000* | |
C22 | 0.5945 (8) | 0.7737 (7) | 0.2251 (13) | 0.00000* | |
H18 | 0.5815 (8) | 0.7238 (7) | 0.1832 (13) | 0.00000* | |
C19 | 0.6331 (8) | 0.9167 (7) | 0.3469 (13) | 0.00000* | |
H15 | 0.6465 (8) | 0.9659 (7) | 0.3905 (13) | 0.00000* | |
C13 | 0.4304 (8) | 0.8076 (7) | 0.6355 (13) | 0.00000* | |
H11 | 0.3934 (8) | 0.7638 (7) | 0.6539 (13) | 0.00000* | |
C16 | 0.5394 (8) | 0.9363 (7) | 0.5851 (13) | 0.00000* | |
H14 | 0.5769 (8) | 0.9800 (7) | 0.5679 (13) | 0.00000* | |
C20 | 0.6693 (8) | 0.9012 (7) | 0.2369 (13) | 0.00000* | |
H16 | 0.7076 (8) | 0.9396 (7) | 0.2043 (13) | 0.00000* | |
C15 | 0.4927 (8) | 0.9395 (7) | 0.6887 (13) | 0.00000* | |
H13 | 0.4977 (8) | 0.9855 (7) | 0.7421 (13) | 0.00000* | |
C21 | 0.6493 (8) | 0.8287 (7) | 0.1743 (13) | 0.00000* | |
H17 | 0.6730 (8) | 0.8173 (7) | 0.0979 (13) | 0.00000* | |
C14 | 0.4386 (8) | 0.8750 (7) | 0.7143 (13) | 0.00000* | |
H12 | 0.4070 (8) | 0.8768 (7) | 0.7858 (13) | 0.00000* | |
C17 | 0.5315 (8) | 0.8691 (7) | 0.5062 (13) | 0.00000* | |
Pd3 | 0.0427 (5) | 0.9257 (5) | 0.0879 (6) | 0.00000* | |
O3 | 0.049 (2) | 0.981 (2) | −0.090 (3) | 0.00000* | |
N3 | 0.1379 (9) | 0.8409 (7) | 0.0635 (12) | 0.00000* | |
C23 | 0.0291 (9) | 0.8451 (7) | 0.2331 (12) | 0.00000* | |
C29 | 0.1523 (9) | 0.7820 (7) | 0.1507 (12) | 0.00000* | |
C33 | 0.1916 (9) | 0.8486 (7) | −0.0283 (12) | 0.00000* | |
H27 | 0.1811 (9) | 0.8897 (7) | −0.0886 (12) | 0.00000* | |
C30 | 0.2209 (9) | 0.7294 (7) | 0.1443 (12) | 0.00000* | |
H24 | 0.2301 (9) | 0.6878 (7) | 0.2043 (12) | 0.00000* | |
C24 | −0.0319 (9) | 0.8502 (7) | 0.3199 (12) | 0.00000* | |
H20 | −0.0745 (9) | 0.8909 (7) | 0.3119 (12) | 0.00000* | |
C27 | 0.0914 (9) | 0.7291 (7) | 0.3451 (12) | 0.00000* | |
H23 | 0.1334 (9) | 0.6877 (7) | 0.3532 (12) | 0.00000* | |
C31 | 0.2757 (9) | 0.7377 (7) | 0.0506 (12) | 0.00000* | |
H25 | 0.3227 (9) | 0.7019 (7) | 0.0458 (12) | 0.00000* | |
C26 | 0.0309 (9) | 0.7357 (7) | 0.4316 (12) | 0.00000* | |
H22 | 0.0316 (9) | 0.6993 (7) | 0.4994 (12) | 0.00000* | |
C32 | 0.2612 (9) | 0.7986 (7) | −0.0369 (12) | 0.00000* | |
H26 | 0.2986 (9) | 0.8058 (7) | −0.1015 (12) | 0.00000* | |
C25 | −0.0310 (9) | 0.7959 (7) | 0.4187 (12) | 0.00000* | |
H21 | −0.0729 (9) | 0.8001 (7) | 0.4775 (12) | 0.00000* | |
C28 | 0.0908 (9) | 0.7831 (7) | 0.2462 (12) | 0.00000* |
Experimental details
Crystal data | |
Chemical formula | C22H18N2O2Pd2 |
Mr | 555.2 |
Crystal system, space group | Monoclinic, P121/N1 |
Temperature (K) | 298 |
a, b, c (Å) | 15.9574 (10), 16.1807 (10), 10.9808 (7) |
β (°) | 92.115 (3) |
V (Å3) | 2833.2 (3) |
Z | 6 |
Radiation type | Cu Kα, λ = 1.54183 Å |
Specimen shape, size (mm) | ?, ? × ? × ? |
Data collection | |
Diffractometer | Diffractometer |
Specimen mounting | ? |
Data collection mode | ? |
Scan method | Step |
2θ values (°) | 2θmin = 4.975 2θmax = 99.975 2θstep = 0.020 |
Refinement | |
R factors and goodness of fit | Rp = 9.545, Rwp = 12.461, Rexp = 6.098, RBragg = 9.837, χ2 = 4.176 |
No. of data points | 4751 |
No. of parameters | 76 |
No. of restraints | 13 |
H-atom treatment | H-atom parameters constrained |
Computer programs: FOX, FULLPROF.