



Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536807063866/sg2209sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536807063866/sg2209Isup2.hkl |
CCDC reference: 676162
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean
(C-C) = 0.010 Å
- R factor = 0.046
- wR factor = 0.118
- Data-to-parameter ratio = 7.7
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT111_ALERT_2_B ADDSYM Detects (Pseudo) Centre of Symmetry ..... 94 PerFi PLAT242_ALERT_2_B Check Low Ueq as Compared to Neighbors for C11
Alert level C PLAT089_ALERT_3_C Poor Data / Parameter Ratio (Zmax .LT. 18) ..... 7.73 PLAT113_ALERT_2_C ADDSYM Suggests Possible Pseudo/New Space-group. P-1 PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for O1 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C3 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C6 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C26 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C31 PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang ... 10 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 1 C12 H21 N O4 PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 2 C12 H21 N O4
Alert level G REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 25.00 From the CIF: _reflns_number_total 2451 Count of symmetry unique reflns 2470 Completeness (_total/calc) 99.23% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 0 Fraction of Friedel pairs measured 0.000 Are heavy atom types Z>Si present no PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature . 293 K PLAT791_ALERT_1_G Confirm the Absolute Configuration of C3 ... S PLAT791_ALERT_1_G Confirm the Absolute Configuration of C23 ... S PLAT860_ALERT_3_G Note: Number of Least-Squares Restraints ....... 3
0 ALERT level A = In general: serious problem 2 ALERT level B = Potentially serious problem 10 ALERT level C = Check and explain 6 ALERT level G = General alerts; check 4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 8 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
The title compound was synthesized by treating complex of triphenylphosphine (525 mg, 2 mmol) and diethyldiazadicarboxylate in dry tetrahydrofurane with solution of Boc-(S)-iso-butylserine (N-Boc-(S)-α-hydroxymethylleucine) in dry THF (698 mg, 2 mmol) at 0°C. After stirring 1 hr at 0°C and then 16 hrs at room temperature, THF was removed in vacuo and the crude product was purified by flash chromatography on silica gel 60 (230–400 mesh), using ethyl acetate-n-hexane (1:1) as eluent. The N-Boc-(S)-α-benzylserine lactone was obtained in 95% yield. White crystals of (I) suitable for X-ray investigation were grown from chloroform.
In the absence of significant anomalous scattering effects, Friedel pairs were merged. The absolute configuration was assigned consistent with the starting material. All H atoms were included in calculated positions and treated as riding, C–H = 0.96–0.98 and N–H = 0.86 Å with Uiso(H) = 1.2 or 1.5Ueq(C) and 1.2Ueq(N).
The discovery of a significant number of natural 2-oxetanones with very interesting biological activities has attracted much attention towards the preparation and its use as a synthetic intermediate (Yang & Romo, 1999). N-Protected-α-amino-β-lactones are useful intermediates for synthesis of β-substituted alanines via ring opening by various nucleophiles (Pansare et al., 1991). Reactions of N-Boc-α-alkylserine β-lactones with soft sulfur nucleophiles (Olma, 2004) or with sodium azide (Olma & Kudaj, 2005) yield potentially interesting building blocks for medicinal chemistry.
As part of out studies in this area, we report here the crystal structure of the title compound, (I). In the crystal structure of (I) the asymmetric unit is composed of two molecules. Pairs of these molecules are connected into pesudocentrosymmetric dimers via N–H···N hydrogen bonds, forming eight-membered rings described by the R22(8) graph-set motif (Etter et al., 1990) (Fig. 1). The same motif with comparable bond lengths is also observed in the structure of α-methyl analog (Smith & Goodman, 2003). The molecules in (I) differ mainly in the orientation of isobutyl substituents (Fig. 2), as indicated by torsion angles of -172.2 (6) and 85.9 (7)° for C2—C3—C5—C6 and C22—C23—C25—C26, respectively.
For related literature, see: Etter et al. (1990); Olma (2004); Olma & Kudaj (2005); Pansare et al. (1991); Smith & Goodman (2003); Yang & Romo (1999).
Data collection: CrysAlis CCD (Oxford Diffraction, 2007); cell refinement: CrysAlis RED (Oxford Diffraction, 2007); data reduction: CrysAlis RED (Oxford Diffraction, 2007); program(s) used to solve structure: SHELXTL (Bruker, 2000); program(s) used to refine structure: SHELXTL (Bruker, 2000); molecular graphics: SHELXTL (Bruker, 2000) and POV-RAY (Persistence of Vision, 2004); software used to prepare material for publication: PLATON (Spek, 2003).
C12H21NO4 | Z = 2 |
Mr = 243.30 | F(000) = 264 |
Triclinic, P1 | Dx = 1.155 Mg m−3 |
Hall symbol: P 1 | Melting point = 382–383 K |
a = 6.1642 (7) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 11.2018 (16) Å | Cell parameters from 4065 reflections |
c = 11.6915 (14) Å | θ = 3.4–26.0° |
α = 115.936 (14)° | µ = 0.09 mm−1 |
β = 100.621 (10)° | T = 293 K |
γ = 95.362 (11)° | Rectangular plate, colourless |
V = 699.58 (19) Å3 | 0.25 × 0.20 × 0.10 mm |
KUMA KM4CCD diffractometer | 1367 reflections with I > 2σ(I) |
Radiation source: CX-Mo12x0.4-S Seifert Mo tube | Rint = 0.032 |
Graphite monochromator | θmax = 25.0°, θmin = 3.4° |
Detector resolution: 8.2356 pixels mm-1 | h = −7→7 |
ω scans | k = −13→12 |
7367 measured reflections | l = −13→13 |
2451 independent reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: structure-invariant direct methods |
R[F2 > 2σ(F2)] = 0.046 | Hydrogen site location: difference Fourier map |
wR(F2) = 0.118 | H-atom parameters constrained |
S = 0.96 | w = 1/[σ2(Fo2) + (0.062P)2] where P = (Fo2 + 2Fc2)/3 |
2451 reflections | (Δ/σ)max < 0.001 |
317 parameters | Δρmax = 0.12 e Å−3 |
3 restraints | Δρmin = −0.12 e Å−3 |
C12H21NO4 | γ = 95.362 (11)° |
Mr = 243.30 | V = 699.58 (19) Å3 |
Triclinic, P1 | Z = 2 |
a = 6.1642 (7) Å | Mo Kα radiation |
b = 11.2018 (16) Å | µ = 0.09 mm−1 |
c = 11.6915 (14) Å | T = 293 K |
α = 115.936 (14)° | 0.25 × 0.20 × 0.10 mm |
β = 100.621 (10)° |
KUMA KM4CCD diffractometer | 1367 reflections with I > 2σ(I) |
7367 measured reflections | Rint = 0.032 |
2451 independent reflections |
R[F2 > 2σ(F2)] = 0.046 | 3 restraints |
wR(F2) = 0.118 | H-atom parameters constrained |
S = 0.96 | Δρmax = 0.12 e Å−3 |
2451 reflections | Δρmin = −0.12 e Å−3 |
317 parameters |
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 1.4399 (10) | 0.1757 (5) | 0.4830 (5) | 0.109 (2) | |
O2 | 1.1035 (11) | 0.2386 (5) | 0.4645 (6) | 0.142 (3) | |
O9 | 1.1871 (6) | 0.1402 (4) | 0.0465 (4) | 0.0732 (16) | |
O10 | 1.4040 (5) | 0.2338 (4) | 0.2538 (3) | 0.0632 (12) | |
N8 | 1.1595 (7) | 0.0423 (5) | 0.1767 (4) | 0.0608 (17) | |
C2 | 1.2281 (16) | 0.1651 (7) | 0.4225 (7) | 0.094 (4) | |
C3 | 1.2177 (8) | 0.0381 (6) | 0.3000 (5) | 0.056 (2) | |
C4 | 1.4709 (10) | 0.0600 (7) | 0.3684 (7) | 0.080 (3) | |
C5 | 1.0644 (10) | −0.0818 (6) | 0.2932 (6) | 0.065 (2) | |
C6 | 1.0612 (10) | −0.2220 (6) | 0.1830 (6) | 0.071 (2) | |
C7 | 1.2908 (11) | −0.2562 (7) | 0.1790 (6) | 0.084 (3) | |
C8 | 0.9089 (13) | −0.3259 (7) | 0.1990 (9) | 0.116 (4) | |
C9 | 1.2485 (9) | 0.1394 (6) | 0.1522 (6) | 0.057 (2) | |
C11 | 1.5447 (9) | 0.3418 (6) | 0.2464 (6) | 0.0630 (19) | |
C12 | 1.6836 (12) | 0.2758 (8) | 0.1487 (7) | 0.108 (3) | |
C13 | 1.4015 (13) | 0.4276 (8) | 0.2093 (10) | 0.129 (4) | |
C14 | 1.6964 (11) | 0.4200 (7) | 0.3820 (7) | 0.093 (3) | |
O21 | 0.5614 (6) | −0.1756 (4) | −0.4839 (4) | 0.0800 (16) | |
O22 | 0.3389 (6) | −0.0513 (4) | −0.3675 (4) | 0.0866 (16) | |
O29 | 0.7503 (6) | −0.1196 (4) | −0.0326 (4) | 0.0771 (17) | |
O30 | 0.5507 (5) | −0.2205 (4) | −0.2453 (3) | 0.0622 (16) | |
N28 | 0.8048 (6) | −0.0325 (4) | −0.1694 (4) | 0.0567 (17) | |
C22 | 0.5175 (10) | −0.0792 (7) | −0.3759 (6) | 0.066 (3) | |
C23 | 0.7590 (8) | −0.0328 (6) | −0.2933 (6) | 0.052 (2) | |
C24 | 0.7917 (9) | −0.1606 (6) | −0.4128 (6) | 0.071 (2) | |
C25 | 0.8812 (9) | 0.0973 (5) | −0.2828 (6) | 0.058 (2) | |
C26 | 0.8569 (10) | 0.2326 (6) | −0.1764 (6) | 0.067 (2) | |
C27 | 0.6166 (11) | 0.2527 (7) | −0.1836 (7) | 0.091 (3) | |
C28 | 1.0010 (13) | 0.3476 (7) | −0.1818 (8) | 0.104 (3) | |
C29 | 0.7063 (9) | −0.1247 (6) | −0.1397 (6) | 0.055 (2) | |
C31 | 0.3953 (9) | −0.3211 (6) | −0.2350 (6) | 0.063 (2) | |
C32 | 0.2568 (11) | −0.2483 (9) | −0.1438 (8) | 0.107 (3) | |
C33 | 0.5216 (11) | −0.4104 (8) | −0.1981 (9) | 0.108 (3) | |
C34 | 0.2499 (10) | −0.3999 (7) | −0.3762 (6) | 0.091 (3) | |
H4A | 1.50880 | −0.01380 | 0.38540 | 0.0960* | |
H4B | 1.57410 | 0.08380 | 0.32490 | 0.0960* | |
H5A | 1.10960 | −0.08350 | 0.37640 | 0.0780* | |
H5B | 0.91190 | −0.06560 | 0.28400 | 0.0780* | |
H6 | 0.99370 | −0.22450 | 0.09910 | 0.0850* | |
H7A | 1.36120 | −0.25310 | 0.26080 | 0.1260* | |
H7B | 1.38140 | −0.19170 | 0.16490 | 0.1260* | |
H7C | 1.27650 | −0.34540 | 0.10860 | 0.1260* | |
H8 | 1.05900 | −0.02320 | 0.11360 | 0.0730* | |
H8A | 0.90490 | −0.41500 | 0.13110 | 0.1740* | |
H8B | 0.75960 | −0.30710 | 0.19250 | 0.1740* | |
H8C | 0.96630 | −0.32100 | 0.28330 | 0.1740* | |
H12A | 1.74390 | 0.20690 | 0.16460 | 0.1610* | |
H12B | 1.80490 | 0.34300 | 0.15920 | 0.1610* | |
H12C | 1.58960 | 0.23580 | 0.06080 | 0.1610* | |
H13A | 1.30920 | 0.37430 | 0.12130 | 0.1930* | |
H13B | 1.49690 | 0.50330 | 0.21410 | 0.1930* | |
H13C | 1.30720 | 0.45980 | 0.26880 | 0.1930* | |
H14A | 1.60960 | 0.43350 | 0.44550 | 0.1400* | |
H14B | 1.76670 | 0.50620 | 0.39410 | 0.1400* | |
H14C | 1.80990 | 0.37030 | 0.39360 | 0.1400* | |
H24A | 0.90530 | −0.14110 | −0.45310 | 0.0860* | |
H24B | 0.81610 | −0.23510 | −0.39400 | 0.0860* | |
H25A | 0.83120 | 0.09650 | −0.36690 | 0.0700* | |
H25B | 1.04040 | 0.09470 | −0.27000 | 0.0700* | |
H26 | 0.91720 | 0.23590 | −0.09120 | 0.0800* | |
H27A | 0.55490 | 0.25370 | −0.26470 | 0.1370* | |
H27B | 0.61350 | 0.33720 | −0.11110 | 0.1370* | |
H27C | 0.52870 | 0.17990 | −0.17940 | 0.1370* | |
H28 | 0.90560 | 0.03320 | −0.10670 | 0.0680* | |
H28A | 0.94980 | 0.34450 | −0.26590 | 0.1560* | |
H28B | 1.15540 | 0.33770 | −0.16910 | 0.1560* | |
H28C | 0.98850 | 0.43280 | −0.11380 | 0.1560* | |
H32A | 0.14490 | −0.31310 | −0.14260 | 0.1600* | |
H32B | 0.18430 | −0.19110 | −0.17350 | 0.1600* | |
H32C | 0.35230 | −0.19400 | −0.05690 | 0.1600* | |
H33A | 0.63820 | −0.43120 | −0.24390 | 0.1630* | |
H33B | 0.42080 | −0.49270 | −0.22130 | 0.1630* | |
H33C | 0.58780 | −0.36520 | −0.10510 | 0.1630* | |
H34A | 0.34100 | −0.44600 | −0.43350 | 0.1370* | |
H34B | 0.18640 | −0.33820 | −0.40280 | 0.1370* | |
H34C | 0.13090 | −0.46490 | −0.38080 | 0.1370* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.150 (5) | 0.095 (4) | 0.059 (3) | −0.023 (3) | −0.016 (3) | 0.040 (3) |
O2 | 0.215 (6) | 0.089 (3) | 0.128 (4) | 0.045 (4) | 0.085 (4) | 0.038 (3) |
O9 | 0.078 (2) | 0.077 (3) | 0.055 (3) | −0.016 (2) | −0.014 (2) | 0.040 (2) |
O10 | 0.064 (2) | 0.063 (2) | 0.052 (2) | −0.014 (2) | −0.005 (2) | 0.030 (2) |
N8 | 0.066 (3) | 0.060 (3) | 0.055 (3) | −0.011 (2) | −0.008 (2) | 0.039 (3) |
C2 | 0.149 (8) | 0.068 (5) | 0.081 (6) | 0.021 (5) | 0.033 (5) | 0.048 (4) |
C3 | 0.070 (4) | 0.058 (4) | 0.037 (3) | 0.007 (3) | 0.006 (3) | 0.024 (3) |
C4 | 0.091 (5) | 0.077 (4) | 0.071 (4) | 0.000 (4) | −0.007 (3) | 0.048 (4) |
C5 | 0.077 (4) | 0.070 (4) | 0.066 (4) | 0.014 (3) | 0.023 (3) | 0.046 (4) |
C6 | 0.080 (4) | 0.064 (4) | 0.071 (4) | 0.006 (3) | 0.005 (3) | 0.040 (4) |
C7 | 0.112 (5) | 0.079 (4) | 0.073 (4) | 0.032 (4) | 0.028 (4) | 0.042 (4) |
C8 | 0.125 (6) | 0.072 (4) | 0.158 (8) | −0.008 (4) | 0.036 (5) | 0.064 (5) |
C9 | 0.050 (3) | 0.068 (4) | 0.048 (4) | 0.001 (3) | −0.006 (3) | 0.033 (4) |
C11 | 0.062 (3) | 0.049 (3) | 0.071 (4) | −0.006 (3) | 0.004 (3) | 0.030 (3) |
C12 | 0.097 (5) | 0.123 (6) | 0.097 (6) | −0.009 (5) | 0.037 (4) | 0.046 (5) |
C13 | 0.108 (6) | 0.082 (5) | 0.203 (10) | 0.003 (5) | −0.002 (6) | 0.091 (6) |
C14 | 0.095 (5) | 0.075 (4) | 0.080 (5) | −0.023 (4) | 0.001 (4) | 0.027 (4) |
O21 | 0.087 (3) | 0.089 (3) | 0.041 (2) | 0.005 (2) | 0.007 (2) | 0.016 (2) |
O22 | 0.063 (2) | 0.100 (3) | 0.093 (3) | 0.014 (2) | 0.004 (2) | 0.048 (2) |
O29 | 0.086 (3) | 0.082 (3) | 0.061 (3) | −0.016 (2) | −0.014 (2) | 0.050 (3) |
O30 | 0.063 (2) | 0.063 (3) | 0.053 (3) | −0.010 (2) | −0.002 (2) | 0.031 (2) |
N28 | 0.060 (3) | 0.053 (3) | 0.050 (3) | −0.008 (2) | −0.006 (2) | 0.029 (2) |
C22 | 0.056 (4) | 0.089 (5) | 0.065 (4) | 0.012 (3) | 0.008 (3) | 0.050 (4) |
C23 | 0.042 (3) | 0.061 (4) | 0.058 (4) | 0.002 (3) | 0.006 (3) | 0.035 (3) |
C24 | 0.060 (3) | 0.082 (4) | 0.054 (4) | 0.007 (3) | 0.011 (3) | 0.019 (3) |
C25 | 0.059 (3) | 0.064 (4) | 0.055 (4) | 0.008 (3) | 0.013 (3) | 0.032 (3) |
C26 | 0.077 (4) | 0.064 (4) | 0.070 (4) | 0.011 (3) | 0.014 (3) | 0.043 (3) |
C27 | 0.094 (5) | 0.094 (5) | 0.077 (5) | 0.032 (4) | 0.018 (3) | 0.031 (4) |
C28 | 0.123 (6) | 0.074 (5) | 0.112 (6) | −0.001 (4) | 0.029 (4) | 0.044 (4) |
C29 | 0.056 (4) | 0.047 (4) | 0.055 (4) | −0.001 (3) | −0.002 (3) | 0.027 (4) |
C31 | 0.047 (3) | 0.072 (4) | 0.067 (4) | −0.003 (3) | 0.008 (3) | 0.035 (4) |
C32 | 0.078 (5) | 0.151 (7) | 0.086 (5) | 0.010 (5) | 0.029 (4) | 0.050 (5) |
C33 | 0.084 (4) | 0.090 (5) | 0.157 (7) | 0.000 (4) | −0.012 (5) | 0.082 (5) |
C34 | 0.066 (4) | 0.085 (5) | 0.083 (5) | −0.013 (4) | −0.002 (4) | 0.017 (4) |
O1—C2 | 1.333 (11) | C12—H12A | 0.96 |
O1—C4 | 1.461 (9) | C12—H12B | 0.96 |
O2—C2 | 1.189 (12) | C12—H12C | 0.96 |
O9—C9 | 1.228 (8) | C13—H13B | 0.96 |
O10—C9 | 1.319 (7) | C13—H13A | 0.96 |
O10—C11 | 1.465 (8) | C13—H13C | 0.96 |
O21—C22 | 1.350 (8) | C14—H14B | 0.96 |
O21—C24 | 1.460 (7) | C14—H14C | 0.96 |
O22—C22 | 1.182 (8) | C14—H14A | 0.96 |
O29—C29 | 1.206 (8) | C22—C23 | 1.518 (8) |
O30—C31 | 1.470 (8) | C23—C24 | 1.565 (9) |
O30—C29 | 1.345 (7) | C23—C25 | 1.520 (10) |
N8—C3 | 1.443 (7) | C25—C26 | 1.526 (9) |
N8—C9 | 1.336 (9) | C26—C27 | 1.512 (9) |
N8—H8 | 0.8600 | C26—C28 | 1.527 (11) |
N28—C23 | 1.422 (8) | C31—C33 | 1.481 (12) |
N28—C29 | 1.353 (9) | C31—C34 | 1.530 (9) |
N28—H28 | 0.8600 | C31—C32 | 1.495 (10) |
C2—C3 | 1.499 (10) | C24—H24A | 0.97 |
C3—C5 | 1.531 (10) | C24—H24B | 0.97 |
C3—C4 | 1.560 (8) | C25—H25A | 0.97 |
C5—C6 | 1.530 (9) | C25—H25B | 0.97 |
C6—C8 | 1.524 (11) | C26—H26 | 0.98 |
C6—C7 | 1.504 (10) | C27—H27A | 0.96 |
C11—C14 | 1.497 (9) | C27—H27B | 0.96 |
C11—C13 | 1.508 (12) | C27—H27C | 0.96 |
C11—C12 | 1.525 (10) | C28—H28A | 0.96 |
C4—H4B | 0.97 | C28—H28B | 0.96 |
C4—H4A | 0.97 | C28—H28C | 0.96 |
C5—H5B | 0.97 | C32—H32A | 0.96 |
C5—H5A | 0.97 | C32—H32B | 0.96 |
C6—H6 | 0.98 | C32—H32C | 0.96 |
C7—H7A | 0.96 | C33—H33A | 0.96 |
C7—H7C | 0.96 | C33—H33B | 0.96 |
C7—H7B | 0.96 | C33—H33C | 0.96 |
C8—H8B | 0.96 | C34—H34A | 0.96 |
C8—H8C | 0.96 | C34—H34B | 0.96 |
C8—H8A | 0.96 | C34—H34C | 0.96 |
C2—O1—C4 | 92.1 (5) | H14A—C14—H14B | 109 |
C9—O10—C11 | 122.9 (5) | C11—C14—H14A | 109 |
C22—O21—C24 | 91.9 (4) | H14B—C14—H14C | 110 |
C29—O30—C31 | 121.5 (4) | C11—C14—H14B | 110 |
C3—N8—C9 | 125.5 (5) | C11—C14—H14C | 109 |
C3—N8—H8 | 117 | O21—C22—O22 | 125.3 (6) |
C9—N8—H8 | 117 | O22—C22—C23 | 139.1 (6) |
C23—N28—C29 | 126.8 (5) | O21—C22—C23 | 95.6 (5) |
C23—N28—H28 | 117 | N28—C23—C24 | 116.9 (6) |
C29—N28—H28 | 117 | N28—C23—C22 | 118.4 (5) |
O1—C2—C3 | 96.4 (7) | C22—C23—C25 | 114.2 (6) |
O1—C2—O2 | 126.8 (7) | N28—C23—C25 | 111.0 (5) |
O2—C2—C3 | 136.8 (8) | C22—C23—C24 | 81.9 (5) |
N8—C3—C4 | 119.1 (5) | C24—C23—C25 | 111.6 (5) |
C2—C3—C5 | 110.7 (5) | O21—C24—C23 | 89.3 (4) |
N8—C3—C5 | 109.9 (5) | C23—C25—C26 | 118.8 (5) |
N8—C3—C2 | 117.4 (6) | C25—C26—C28 | 109.3 (5) |
C4—C3—C5 | 115.0 (6) | C25—C26—C27 | 114.1 (5) |
C2—C3—C4 | 82.3 (5) | C27—C26—C28 | 110.6 (6) |
O1—C4—C3 | 88.8 (5) | O29—C29—N28 | 124.3 (6) |
C3—C5—C6 | 116.7 (5) | O29—C29—O30 | 125.2 (6) |
C5—C6—C8 | 107.9 (6) | O30—C29—N28 | 110.5 (5) |
C7—C6—C8 | 111.0 (6) | O30—C31—C33 | 110.2 (5) |
C5—C6—C7 | 113.8 (5) | O30—C31—C34 | 101.3 (5) |
O9—C9—O10 | 124.5 (6) | C32—C31—C34 | 110.5 (5) |
O9—C9—N8 | 122.8 (6) | C33—C31—C34 | 110.5 (6) |
O10—C9—N8 | 112.8 (5) | C32—C31—C33 | 114.9 (7) |
C12—C11—C14 | 109.6 (5) | O30—C31—C32 | 108.6 (6) |
O10—C11—C14 | 103.5 (5) | O21—C24—H24A | 114 |
C12—C11—C13 | 112.7 (6) | O21—C24—H24B | 114 |
C13—C11—C14 | 112.1 (7) | C23—C24—H24A | 114 |
O10—C11—C13 | 110.6 (5) | C23—C24—H24B | 114 |
O10—C11—C12 | 107.8 (6) | H24A—C24—H24B | 111 |
C3—C4—H4A | 114 | C23—C25—H25A | 108 |
C3—C4—H4B | 114 | C23—C25—H25B | 108 |
O1—C4—H4B | 114 | C26—C25—H25A | 108 |
O1—C4—H4A | 114 | C26—C25—H25B | 108 |
H4A—C4—H4B | 111 | H25A—C25—H25B | 107 |
H5A—C5—H5B | 107 | C25—C26—H26 | 107 |
C6—C5—H5B | 108 | C27—C26—H26 | 108 |
C3—C5—H5A | 108 | C28—C26—H26 | 108 |
C6—C5—H5A | 108 | C26—C27—H27A | 110 |
C3—C5—H5B | 108 | C26—C27—H27B | 109 |
C7—C6—H6 | 108 | C26—C27—H27C | 109 |
C8—C6—H6 | 108 | H27A—C27—H27B | 110 |
C5—C6—H6 | 108 | H27A—C27—H27C | 109 |
C6—C7—H7C | 109 | H27B—C27—H27C | 109 |
C6—C7—H7A | 110 | C26—C28—H28A | 109 |
H7A—C7—H7B | 109 | C26—C28—H28B | 109 |
H7B—C7—H7C | 109 | C26—C28—H28C | 109 |
H7A—C7—H7C | 110 | H28A—C28—H28B | 109 |
C6—C7—H7B | 109 | H28A—C28—H28C | 110 |
C6—C8—H8A | 109 | H28B—C28—H28C | 109 |
C6—C8—H8B | 109 | C31—C32—H32A | 109 |
H8B—C8—H8C | 110 | C31—C32—H32B | 109 |
H8A—C8—H8B | 109 | C31—C32—H32C | 109 |
C6—C8—H8C | 109 | H32A—C32—H32B | 110 |
H8A—C8—H8C | 109 | H32A—C32—H32C | 110 |
C11—C12—H12B | 110 | H32B—C32—H32C | 109 |
C11—C12—H12C | 110 | C31—C33—H33A | 110 |
C11—C12—H12A | 109 | C31—C33—H33B | 109 |
H12A—C12—H12B | 109 | C31—C33—H33C | 109 |
H12A—C12—H12C | 109 | H33A—C33—H33B | 109 |
H12B—C12—H12C | 109 | H33A—C33—H33C | 109 |
C11—C13—H13C | 109 | H33B—C33—H33C | 109 |
H13A—C13—H13B | 109 | C31—C34—H34A | 110 |
H13A—C13—H13C | 109 | C31—C34—H34B | 109 |
C11—C13—H13B | 109 | C31—C34—H34C | 109 |
H13B—C13—H13C | 109 | H34A—C34—H34B | 109 |
C11—C13—H13A | 109 | H34A—C34—H34C | 109 |
H14A—C14—H14C | 109 | H34B—C34—H34C | 109 |
C4—O1—C2—O2 | −176.6 (9) | O1—C2—C3—C5 | 109.5 (6) |
C4—O1—C2—C3 | 4.7 (6) | O2—C2—C3—C5 | −69.0 (12) |
C2—O1—C4—C3 | −4.5 (6) | O1—C2—C3—N8 | −123.3 (6) |
C11—O10—C9—O9 | −8.8 (9) | O2—C2—C3—C4 | 177.1 (11) |
C11—O10—C9—N8 | 172.5 (5) | O2—C2—C3—N8 | 58.2 (13) |
C9—O10—C11—C12 | −62.4 (7) | N8—C3—C5—C6 | 56.6 (7) |
C9—O10—C11—C13 | 61.2 (8) | C4—C3—C5—C6 | −81.1 (7) |
C9—O10—C11—C14 | −178.5 (5) | C2—C3—C5—C6 | −172.2 (6) |
C22—O21—C24—C23 | −8.8 (5) | N8—C3—C4—O1 | 121.1 (6) |
C24—O21—C22—O22 | −172.7 (8) | C2—C3—C4—O1 | 4.0 (5) |
C24—O21—C22—C23 | 9.1 (6) | C5—C3—C4—O1 | −105.3 (6) |
C31—O30—C29—O29 | 8.2 (9) | C3—C5—C6—C8 | 177.1 (6) |
C31—O30—C29—N28 | −170.7 (5) | C3—C5—C6—C7 | 53.4 (8) |
C29—O30—C31—C32 | 61.1 (7) | O22—C22—C23—C24 | 173.7 (11) |
C29—O30—C31—C33 | −65.5 (7) | O22—C22—C23—C25 | −76.2 (12) |
C29—O30—C31—C34 | 177.5 (5) | O21—C22—C23—N28 | −124.8 (6) |
C9—N8—C3—C2 | 47.2 (8) | O21—C22—C23—C24 | −8.6 (5) |
C3—N8—C9—O9 | −177.5 (5) | O21—C22—C23—C25 | 101.5 (6) |
C3—N8—C9—O10 | 1.3 (8) | O22—C22—C23—N28 | 57.4 (14) |
C9—N8—C3—C4 | −49.5 (9) | N28—C23—C24—O21 | 125.8 (5) |
C9—N8—C3—C5 | 174.8 (5) | N28—C23—C25—C26 | −51.2 (7) |
C29—N28—C23—C25 | 172.4 (5) | C22—C23—C25—C26 | 85.9 (7) |
C23—N28—C29—O30 | −0.8 (8) | C24—C23—C25—C26 | 176.6 (5) |
C29—N28—C23—C24 | −58.1 (7) | C25—C23—C24—O21 | −105.0 (5) |
C23—N28—C29—O29 | −179.6 (6) | C22—C23—C24—O21 | 7.9 (5) |
C29—N28—C23—C22 | 37.4 (9) | C23—C25—C26—C28 | 177.8 (6) |
O1—C2—C3—C4 | −4.4 (6) | C23—C25—C26—C27 | −57.9 (8) |
D—H···A | D—H | H···A | D···A | D—H···A |
N8—H8···O29 | 0.86 | 2.12 | 2.937 (6) | 158 |
N28—H28···O9 | 0.86 | 2.06 | 2.890 (6) | 162 |
C12—H12C···O9 | 0.96 | 2.55 | 3.049 (9) | 112 |
C13—H13A···O9 | 0.96 | 2.36 | 2.941 (11) | 118 |
C27—H27C···O22 | 0.96 | 2.53 | 3.209 (9) | 127 |
C32—H32C···O29 | 0.96 | 2.44 | 3.018 (9) | 119 |
Experimental details
Crystal data | |
Chemical formula | C12H21NO4 |
Mr | 243.30 |
Crystal system, space group | Triclinic, P1 |
Temperature (K) | 293 |
a, b, c (Å) | 6.1642 (7), 11.2018 (16), 11.6915 (14) |
α, β, γ (°) | 115.936 (14), 100.621 (10), 95.362 (11) |
V (Å3) | 699.58 (19) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.25 × 0.20 × 0.10 |
Data collection | |
Diffractometer | KUMA KM4CCD diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 7367, 2451, 1367 |
Rint | 0.032 |
(sin θ/λ)max (Å−1) | 0.595 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.046, 0.118, 0.96 |
No. of reflections | 2451 |
No. of parameters | 317 |
No. of restraints | 3 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.12, −0.12 |
Computer programs: CrysAlis CCD (Oxford Diffraction, 2007), CrysAlis RED (Oxford Diffraction, 2007), SHELXTL (Bruker, 2000) and POV-RAY (Persistence of Vision, 2004), PLATON (Spek, 2003).
D—H···A | D—H | H···A | D···A | D—H···A |
N8—H8···O29 | 0.86 | 2.12 | 2.937 (6) | 158 |
N28—H28···O9 | 0.86 | 2.06 | 2.890 (6) | 162 |
C12—H12C···O9 | 0.96 | 2.55 | 3.049 (9) | 112 |
C13—H13A···O9 | 0.96 | 2.36 | 2.941 (11) | 118 |
C27—H27C···O22 | 0.96 | 2.53 | 3.209 (9) | 127 |
C32—H32C···O29 | 0.96 | 2.44 | 3.018 (9) | 119 |
The discovery of a significant number of natural 2-oxetanones with very interesting biological activities has attracted much attention towards the preparation and its use as a synthetic intermediate (Yang & Romo, 1999). N-Protected-α-amino-β-lactones are useful intermediates for synthesis of β-substituted alanines via ring opening by various nucleophiles (Pansare et al., 1991). Reactions of N-Boc-α-alkylserine β-lactones with soft sulfur nucleophiles (Olma, 2004) or with sodium azide (Olma & Kudaj, 2005) yield potentially interesting building blocks for medicinal chemistry.
As part of out studies in this area, we report here the crystal structure of the title compound, (I). In the crystal structure of (I) the asymmetric unit is composed of two molecules. Pairs of these molecules are connected into pesudocentrosymmetric dimers via N–H···N hydrogen bonds, forming eight-membered rings described by the R22(8) graph-set motif (Etter et al., 1990) (Fig. 1). The same motif with comparable bond lengths is also observed in the structure of α-methyl analog (Smith & Goodman, 2003). The molecules in (I) differ mainly in the orientation of isobutyl substituents (Fig. 2), as indicated by torsion angles of -172.2 (6) and 85.9 (7)° for C2—C3—C5—C6 and C22—C23—C25—C26, respectively.