Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536809052222/si2221sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536809052222/si2221Isup2.hkl |
CCDC reference: 766795
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.003 Å
- R factor = 0.035
- wR factor = 0.089
- Data-to-parameter ratio = 11.8
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ ? PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 2
Alert level G PLAT063_ALERT_4_G Crystal Size Likely too Large for Beam Size .... 0.65 mm PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature 293 K
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 2 ALERT level C = Check and explain 3 ALERT level G = General alerts; check 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
An excess of hydrochloric acid was added dropwise to a solution of N,N'-Dicyclohexylethylenediamine monohydrate (1.11 g, 5 mmol) prepared by standard techniques (Denk et al., 2003) in a ethanol/water mixture(10:1, 20 ml) and stirred for 6 h at 140 °C in an autoclave. The mixture was slowly cooled to ambient temperature and colourless plate-like crystals were obtained. Spectroscopic data: 1H NMR (D2O, 500 MHz, 298 K, p.p.m.): δ 1.07–1.99 (m, 20 H, CH2, Cy), 3.09 (m, 2H, CH), 3.32 (s, 4H, CH2); 13C NMR (D2O, 125 MHz, 298 K, p.p.m.): δ 23.7 (s, CH2, Cy: C4, C6), 24.3 (s, CH2, Cy: C5), 26.7 (s, CH2, Cy: C3, C7), 40.0 (s, CH2), 57.934 (s, CH, Cy).
Data collection: STADI4 (Stoe & Cie, 1996); cell refinement: STADI4 (Stoe & Cie, 1996); data reduction: X-RED (Stoe & Cie, 1996); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2009); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
C14H30N22+·2Cl− | F(000) = 324 |
Mr = 297.30 | Dx = 1.163 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 22 reflections |
a = 11.551 (3) Å | θ = 10.2–14.6° |
b = 6.785 (2) Å | µ = 0.37 mm−1 |
c = 10.8434 (17) Å | T = 293 K |
β = 91.892 (15)° | Plate, colourless |
V = 849.3 (4) Å3 | 0.65 × 0.28 × 0.12 mm |
Z = 2 |
Stoe STADI4 diffractometer | Rint = 0.036 |
Radiation source: fine-focus sealed tube | θmax = 26.1°, θmin = 1.8° |
Graphite monochromator | h = −14→14 |
2θ/ω scans | k = −8→0 |
3349 measured reflections | l = −13→13 |
1675 independent reflections | 2 standard reflections every 120 min |
1430 reflections with I > 2σ(I) | intensity decay: none |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.035 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.089 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | w = 1/[σ2(Fo2) + (0.0304P)2 + 0.223P] where P = (Fo2 + 2Fc2)/3 |
1675 reflections | (Δ/σ)max < 0.001 |
142 parameters | Δρmax = 0.23 e Å−3 |
0 restraints | Δρmin = −0.28 e Å−3 |
C14H30N22+·2Cl− | V = 849.3 (4) Å3 |
Mr = 297.30 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 11.551 (3) Å | µ = 0.37 mm−1 |
b = 6.785 (2) Å | T = 293 K |
c = 10.8434 (17) Å | 0.65 × 0.28 × 0.12 mm |
β = 91.892 (15)° |
Stoe STADI4 diffractometer | Rint = 0.036 |
3349 measured reflections | 2 standard reflections every 120 min |
1675 independent reflections | intensity decay: none |
1430 reflections with I > 2σ(I) |
R[F2 > 2σ(F2)] = 0.035 | 0 restraints |
wR(F2) = 0.089 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.23 e Å−3 |
1675 reflections | Δρmin = −0.28 e Å−3 |
142 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.05608 (15) | 0.4477 (3) | 0.48641 (16) | 0.0404 (4) | |
H2 | 0.1138 (18) | 0.537 (3) | 0.4631 (19) | 0.054 (6)* | |
H1 | 0.0449 (18) | 0.353 (3) | 0.419 (2) | 0.059 (6)* | |
C2 | 0.21086 (13) | 0.2307 (2) | 0.58171 (14) | 0.0342 (3) | |
H5 | 0.2039 (14) | 0.163 (3) | 0.5053 (16) | 0.038 (4)* | |
C3 | 0.22533 (16) | 0.0777 (3) | 0.6834 (2) | 0.0478 (5) | |
H6 | 0.2248 (18) | 0.147 (3) | 0.763 (2) | 0.059 (6)* | |
H7 | 0.1619 (18) | −0.009 (4) | 0.6755 (18) | 0.058 (6)* | |
C4 | 0.33978 (18) | −0.0313 (3) | 0.6726 (3) | 0.0574 (5) | |
H8 | 0.3397 (19) | −0.095 (3) | 0.596 (2) | 0.063 (7)* | |
H9 | 0.346 (2) | −0.123 (4) | 0.738 (2) | 0.069 (7)* | |
C5 | 0.44122 (17) | 0.1104 (3) | 0.6751 (2) | 0.0513 (5) | |
H10 | 0.4456 (18) | 0.173 (3) | 0.757 (2) | 0.064 (6)* | |
H11 | 0.516 (2) | 0.045 (3) | 0.668 (2) | 0.068 (6)* | |
C6 | 0.42621 (16) | 0.2660 (3) | 0.5755 (2) | 0.0522 (5) | |
H12 | 0.4254 (18) | 0.198 (3) | 0.497 (2) | 0.064 (6)* | |
H13 | 0.492 (2) | 0.354 (4) | 0.581 (2) | 0.075 (7)* | |
C7 | 0.31115 (15) | 0.3757 (3) | 0.58388 (18) | 0.0419 (4) | |
H14 | 0.3073 (17) | 0.447 (3) | 0.6637 (19) | 0.054 (6)* | |
H15 | 0.3005 (17) | 0.466 (3) | 0.5188 (18) | 0.053 (6)* | |
N | 0.09763 (12) | 0.3358 (2) | 0.59677 (13) | 0.0335 (3) | |
H4 | 0.1015 (17) | 0.416 (3) | 0.6647 (19) | 0.052 (6)* | |
H3 | 0.0454 (17) | 0.257 (3) | 0.6169 (17) | 0.045 (5)* | |
Cl | 0.12073 (4) | 0.59342 (7) | 0.83342 (4) | 0.04938 (17) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0421 (9) | 0.0418 (9) | 0.0375 (8) | 0.0074 (8) | 0.0039 (7) | 0.0097 (7) |
C2 | 0.0376 (8) | 0.0297 (8) | 0.0351 (8) | 0.0025 (6) | −0.0004 (6) | −0.0027 (6) |
C3 | 0.0413 (10) | 0.0349 (9) | 0.0670 (13) | −0.0006 (8) | −0.0007 (8) | 0.0165 (9) |
C4 | 0.0521 (11) | 0.0354 (9) | 0.0838 (16) | 0.0089 (9) | −0.0074 (10) | 0.0073 (11) |
C5 | 0.0405 (10) | 0.0492 (11) | 0.0638 (12) | 0.0098 (8) | −0.0038 (8) | 0.0007 (9) |
C6 | 0.0391 (9) | 0.0583 (12) | 0.0596 (12) | 0.0033 (9) | 0.0088 (8) | 0.0046 (10) |
C7 | 0.0383 (9) | 0.0361 (9) | 0.0514 (10) | −0.0011 (7) | 0.0039 (7) | 0.0081 (8) |
N | 0.0338 (7) | 0.0314 (7) | 0.0352 (7) | −0.0018 (6) | 0.0011 (5) | 0.0043 (6) |
Cl | 0.0569 (3) | 0.0446 (3) | 0.0467 (3) | 0.0160 (2) | 0.00215 (19) | −0.00631 (19) |
C1—N | 1.484 (2) | C4—H8 | 0.94 (2) |
C1—C1i | 1.514 (3) | C4—H9 | 0.95 (2) |
C1—H2 | 0.94 (2) | C5—C6 | 1.516 (3) |
C1—H1 | 0.98 (2) | C5—H10 | 0.98 (2) |
C2—N | 1.503 (2) | C5—H11 | 0.98 (2) |
C2—C7 | 1.519 (2) | C6—C7 | 1.529 (2) |
C2—C3 | 1.519 (2) | C6—H12 | 0.97 (2) |
C2—H5 | 0.948 (18) | C6—H13 | 0.97 (3) |
C3—C4 | 1.523 (3) | C7—H14 | 0.99 (2) |
C3—H6 | 0.98 (2) | C7—H15 | 0.94 (2) |
C3—H7 | 0.94 (2) | N—H4 | 0.91 (2) |
C4—C5 | 1.515 (3) | N—H3 | 0.84 (2) |
N—C1—C1i | 109.80 (17) | C4—C5—C6 | 111.01 (17) |
N—C1—H2 | 109.4 (13) | C4—C5—H10 | 108.0 (13) |
C1i—C1—H2 | 111.7 (12) | C6—C5—H10 | 109.9 (13) |
N—C1—H1 | 107.3 (13) | C4—C5—H11 | 113.4 (14) |
C1i—C1—H1 | 111.1 (12) | C6—C5—H11 | 109.8 (13) |
H2—C1—H1 | 107.4 (17) | H10—C5—H11 | 104.5 (18) |
N—C2—C7 | 110.89 (13) | C5—C6—C7 | 112.07 (16) |
N—C2—C3 | 108.69 (13) | C5—C6—H12 | 107.2 (13) |
C7—C2—C3 | 111.44 (15) | C7—C6—H12 | 107.4 (13) |
N—C2—H5 | 106.0 (10) | C5—C6—H13 | 108.4 (14) |
C7—C2—H5 | 111.7 (10) | C7—C6—H13 | 112.4 (14) |
C3—C2—H5 | 107.9 (11) | H12—C6—H13 | 109.2 (18) |
C2—C3—C4 | 110.54 (17) | C2—C7—C6 | 110.34 (15) |
C2—C3—H6 | 108.0 (12) | C2—C7—H14 | 105.8 (12) |
C4—C3—H6 | 109.2 (12) | C6—C7—H14 | 110.7 (12) |
C2—C3—H7 | 107.1 (13) | C2—C7—H15 | 109.3 (12) |
C4—C3—H7 | 111.5 (13) | C6—C7—H15 | 111.5 (12) |
H6—C3—H7 | 110.5 (17) | H14—C7—H15 | 109.1 (17) |
C5—C4—C3 | 111.30 (17) | C1—N—C2 | 114.50 (13) |
C5—C4—H8 | 106.8 (14) | C1—N—H4 | 110.6 (12) |
C3—C4—H8 | 108.5 (14) | C2—N—H4 | 110.5 (13) |
C5—C4—H9 | 111.3 (14) | C1—N—H3 | 108.6 (13) |
C3—C4—H9 | 107.9 (14) | C2—N—H3 | 111.1 (13) |
H8—C4—H9 | 111 (2) | H4—N—H3 | 100.6 (17) |
N—C2—C3—C4 | −179.40 (16) | C3—C2—C7—C6 | 55.7 (2) |
C7—C2—C3—C4 | −56.9 (2) | C5—C6—C7—C2 | −54.8 (2) |
C2—C3—C4—C5 | 56.5 (3) | C1i—C1—N—C2 | −178.21 (18) |
C3—C4—C5—C6 | −55.5 (3) | C7—C2—N—C1 | 73.57 (19) |
C4—C5—C6—C7 | 54.9 (2) | C3—C2—N—C1 | −163.61 (15) |
N—C2—C7—C6 | 176.95 (14) |
Symmetry code: (i) −x, −y+1, −z+1. |
D—H···A | D—H | H···A | D···A | D—H···A |
N—H4···Cl | 0.91 (2) | 2.20 (2) | 3.1088 (16) | 175.8 (18) |
N—H3···Clii | 0.84 (2) | 2.30 (2) | 3.1250 (16) | 168.8 (18) |
Symmetry code: (ii) −x, y−1/2, −z+3/2. |
Experimental details
Crystal data | |
Chemical formula | C14H30N22+·2Cl− |
Mr | 297.30 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 11.551 (3), 6.785 (2), 10.8434 (17) |
β (°) | 91.892 (15) |
V (Å3) | 849.3 (4) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.37 |
Crystal size (mm) | 0.65 × 0.28 × 0.12 |
Data collection | |
Diffractometer | Stoe STADI4 diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 3349, 1675, 1430 |
Rint | 0.036 |
(sin θ/λ)max (Å−1) | 0.618 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.035, 0.089, 1.10 |
No. of reflections | 1675 |
No. of parameters | 142 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.23, −0.28 |
Computer programs: STADI4 (Stoe & Cie, 1996), X-RED (Stoe & Cie, 1996), SHELXS97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2009), SHELXL97 (Sheldrick, 2008) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
N—H4···Cl | 0.91 (2) | 2.20 (2) | 3.1088 (16) | 175.8 (18) |
N—H3···Cli | 0.84 (2) | 2.30 (2) | 3.1250 (16) | 168.8 (18) |
Symmetry code: (i) −x, y−1/2, −z+3/2. |
Compared to other N,N'-disubstituted ethylenediamine compounds RNH-CH2CH2—NHR (R = Me, Ph, etc.) N,N'-Dicyclohexylethylenediamine derivatives have been studied only rarely by X-ray diffraction. One of the few examples is the Iridium complex [Cp*(CyNHCH2CH2NHCy)HIr][H3BCN] (Greulich et al., 2002).
The crystal structure of the title compound (Fig. 1) consists of [CyNH2CH2CH2NH2Cy]2+ cations and Cl- anions. The [CyNH2CH2CH2NH2Cy]2+ cations exhibit crystallographic 1 symmetry and thus an exactly staggered conformation with a N—C—C—N torsion angle of 180 ° is observed. The N atoms display a distorted tetrahedral coordination with H—N—C angles of 108.6 to 111.2 and a C—N—C angle of 114.50 (1)°. The cyclohexyl groups adopt a chair conformation (Fig. 2) as it was observed in [Cp*(CyNHCH2CH2NHCy)HIr][H3BCN] (Greulich et al., 2002). Both hydrogen atoms of the NH2 groups are involved in hydrogen bridges to neighbouring Cl- anions. The NH···Cl distances of 2.20 (2) and 2.30 (2) Å are comparable to those found in other cyclohexylammonium derivatives like [CyNH3]Cl (2.187–2.35.4 Å) (Smith et al., 1994) and [CyNH3]2(AlCl4)Cl (2.305–2.478 Å) (Martell & Zaworotko, 1991) respectively. The N—H···Cl angles of 169 (2)° and 176 (2)° are in the expected range for hydrogen bridges of moderate strength (Steiner, 2002).
On balance each [CyNH2CH2CH2NH2Cy]2+ cation forms four N—H···Cl bridges to neighbouring Cl- anions and each Cl- anion acts as H-acceptor for two NH hydrogen atoms. As a result of the hydrogen bonding between [CyNH2CH2CH2NH2Cy]2+ cations and Cl- anions a two-dimensional layer structure is formed. The layers consist of puckered C4H8N6Cl4 rings that are interconnected to give a honeycomb arrangement with {6,3} net topology (Wells & Sharpe, 1963).