Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536810054048/sj5084sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536810054048/sj5084Isup2.hkl |
CCDC reference: 784470
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean (C-C) = 0.007 Å
- R factor = 0.075
- wR factor = 0.162
- Data-to-parameter ratio = 9.6
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT220_ALERT_2_C Large Non-Solvent O Ueq(max)/Ueq(min) ... 3.03 Ratio PLAT222_ALERT_3_C Large Non-Solvent H Uiso(max)/Uso(min) ... 6.41 Ratio PLAT241_ALERT_2_C Check High Ueq as Compared to Neighbors for C6 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for N1 PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C1 PLAT245_ALERT_2_C U(iso) H2N Smaller than U(eq) N2 by ... 0.03 AngSq PLAT334_ALERT_2_C Small Average Benzene C-C Dist. C1 -C6 1.37 Ang. PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds (x 1000) Ang .. 7 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 4 PLAT152_ALERT_1_C The Supplied and Calc. Volume s.u. Differ by ... 19 Units PLAT950_ALERT_1_C Reported and Calculated Hmax Values Differ by .. 4
Alert level G REFLT03_ALERT_1_G ALERT: Expected hkl max differ from CIF values From the CIF: _diffrn_reflns_theta_max 27.46 From the CIF: _reflns_number_total 3144 From the CIF: _diffrn_reflns_limit_ max hkl 0. 26. 13. From the CIF: _diffrn_reflns_limit_ min hkl -22. 0. -13. TEST1: Expected hkl limits for theta max Calculated maximum hkl 26. 26. 13. Calculated minimum hkl -26. -26. -13. REFLT03_ALERT_4_G Please check that the estimate of the number of Friedel pairs is correct. If it is not, please give the correct count in the _publ_section_exptl_refinement section of the submitted CIF. From the CIF: _diffrn_reflns_theta_max 27.46 From the CIF: _reflns_number_total 3144 Count of symmetry unique reflns 3142 Completeness (_total/calc) 100.06% TEST3: Check Friedels for noncentro structure Estimate of Friedel pairs measured 2 Fraction of Friedel pairs measured 0.001 Are heavy atom types Z>Si present no PLAT199_ALERT_1_G Check the Reported _cell_measurement_temperature 293 K PLAT200_ALERT_1_G Check the Reported _diffrn_ambient_temperature 293 K PLAT605_ALERT_4_G Structure Contains Solvent Accessible VOIDS of . 452.00 A 3 PLAT791_ALERT_4_G Note: The Model has Chirality at C7 (Verify) R PLAT791_ALERT_4_G Note: The Model has Chirality at C9 (Verify) S PLAT981_ALERT_1_G No non-zero f" Anomalous Scattering Values Found ?
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 11 ALERT level C = Check and explain 8 ALERT level G = General alerts; check 6 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 6 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 4 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
A mixture of 3-(3-aminophenyl)-5-phenylisoxazole (2.8 mmol) 3 and 4-nitrobenzaldehyde (3.4 mmol) 1 in anhydrous CH3CN (15 mL) was stirred at room temperature for 30 min. BiCl3 (2.0 mmol) was added. Over a period of 20 min, a solution the N-vinyl.2-pyrrolidone (NVP) (5.5 mmol) 4 in CH3CN (10 ml) was added dropwise. The resulting mixture was stirred for 10–14 h. After completion of the reaction as indicated by TLC, the reaction mixture was diluted with water (30 mL) and extracted with ethyl acetate (3×15 mL). The organic layer was separated and dried (Na2SO4),concentrated in vacuum and the resulting product was purified by column chromatography (silica gel) using PE and EtOAc mixtures. Obtained for derivatives trans and cis Quinoline-Isoxazole 5 and (I), see Figure 3. Solid crystalline mp 130 - 132 °C; RMN-1H(CDCl3), 400 MHz, δ): 8.24 (2H, d, J = 8.0); 7.81 (2H, d, J= 8.0); 7.60 (1H, d, J = 8.0); 7.27(2H, dd, J = 8.0 and 4.0); 7.17 (1H,t, J = 8.0); 6.97 (1H, d, J = 8.0); 6.89 (2H, d, J = 8.0); 6.78 (1H, d, J = 8.0); 6.62 (1H, s); 5.35 (1H, s); 4.59 (1H, dd, J = 12.0 and 1.0); 4.41 (1H, br. s);2.39 (2H, m); 1.97 (2H, m); 1.62 (2H, s). RMN-13H (CDCl3),400 MHz, δ): 174.68, 169.95, 162.48, 150.61, 147.65, 145.15, 130.87, 129.31, 128.98, 127.47,127.27, 125.95, 125.04, 124.61, 119.61, 116.32, 115.27, 99.89, 52.54, 47.51,46.22, 37.37, 31.36, 18.56. MS m/z (EI): 480. Anal. Calcd. for C28H24N4O4: C, 69.99; H,5.03;N, 11.66. Found: C, 69.89; H, 5.01; N, 11.77.
The SQUEEZE function of PLATON (Spek, 2009) was used to eliminate the contribution of electron density in the solvent region from the intensity data, and a solvent-free model was employed for the final refinement. The volume which is accessible for potential solvent molecules was calculated to be 452.0 Å3 and the total electron count per cell was calculated to be 15. Note that the calculated density, the F(000) value, the molecular weight and the formula are given without taking into account the results obtained with the SQUEEZE option in PLATON (Spek, 2009). Therefore, the solvent-free model and intensity data were used for the final results reported here.
The absolute configuration of the two stereogenic centres could not be established by the Flack parameter (Flack, 1983) and Friedel opposites were merged.
The position of the N2 H atom was refined freely with isotropic displacement parameters. All other H atoms were placed in geometrically idealized positions (C—H = 0.93–0.97 Å) and constrained to ride on their parent atoms with Uiso(H) = 1.2Ueq(C).
Data collection: COLLECT (Nonius, 2000); cell refinement: DENZO-SMN (Otwinowski & Minor, 1997); data reduction: DENZO-SMN (Otwinowski & Minor, 1997); program(s) used to solve structure: SIR97 (Altomare et al., 1999); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997) & PLATON (Spek, 2009); software used to prepare material for publication: WinGX (Farrugia, 1999).
C28H24N4O4 | Dx = 1.229 Mg m−3 |
Mr = 480.51 | Mo Kα radiation, λ = 0.71073 Å |
Hexagonal, P61 | Cell parameters from 2728 reflections |
Hall symbol: P 61 | θ = 2.8–27.5° |
a = 20.753 (3) Å | µ = 0.08 mm−1 |
c = 10.446 (2) Å | T = 293 K |
V = 3896.2 (11) Å3 | Prismatic, orange |
Z = 6 | 0.20 × 0.20 × 0.18 mm |
F(000) = 1512 |
Nonius KappaCCD area-detector diffractometer | 2646 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.026 |
Graphite monochromator | θmax = 27.5°, θmin = 2.8° |
ϕ scans, and ω scans with κ offsets | h = −22→0 |
5951 measured reflections | k = 0→26 |
3144 independent reflections | l = −13→13 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.075 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.162 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.22 | w = 1/[σ2(Fo2) + (0.0755P)2 + 0.8624P] where P = (Fo2 + 2Fc2)/3 |
3144 reflections | (Δ/σ)max = 0.010 |
329 parameters | Δρmax = 0.32 e Å−3 |
1 restraint | Δρmin = −0.24 e Å−3 |
C28H24N4O4 | Z = 6 |
Mr = 480.51 | Mo Kα radiation |
Hexagonal, P61 | µ = 0.08 mm−1 |
a = 20.753 (3) Å | T = 293 K |
c = 10.446 (2) Å | 0.20 × 0.20 × 0.18 mm |
V = 3896.2 (11) Å3 |
Nonius KappaCCD area-detector diffractometer | 2646 reflections with I > 2σ(I) |
5951 measured reflections | Rint = 0.026 |
3144 independent reflections |
R[F2 > 2σ(F2)] = 0.075 | 1 restraint |
wR(F2) = 0.162 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.22 | Δρmax = 0.32 e Å−3 |
3144 reflections | Δρmin = −0.24 e Å−3 |
329 parameters |
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.2019 (3) | −0.0999 (3) | 0.6005 (5) | 0.1165 (18) | |
O2 | 0.1082 (3) | −0.1080 (3) | 0.5004 (7) | 0.147 (3) | |
O3 | 0.54683 (17) | 0.55998 (14) | 0.2252 (3) | 0.0485 (7) | |
O4 | 0.36115 (17) | 0.42435 (19) | 0.2789 (3) | 0.0607 (8) | |
N1 | 0.1743 (3) | −0.0784 (3) | 0.5205 (5) | 0.0880 (15) | |
N2 | 0.43438 (18) | 0.19821 (17) | 0.2011 (4) | 0.0456 (8) | |
N3 | 0.5569 (2) | 0.49764 (18) | 0.2257 (4) | 0.0492 (8) | |
N4 | 0.36641 (16) | 0.33963 (17) | 0.1463 (3) | 0.0388 (7) | |
C1 | 0.2234 (3) | −0.0115 (2) | 0.4445 (5) | 0.0631 (12) | |
C2 | 0.2982 (3) | 0.0205 (3) | 0.4559 (5) | 0.0637 (12) | |
H2 | 0.3186 | −0.0002 | 0.5098 | 0.076* | |
C3 | 0.3433 (2) | 0.0833 (2) | 0.3881 (5) | 0.0597 (12) | |
H3 | 0.3946 | 0.1050 | 0.3963 | 0.072* | |
C4 | 0.3145 (2) | 0.1154 (2) | 0.3075 (4) | 0.0489 (10) | |
C5 | 0.2376 (3) | 0.0806 (3) | 0.2964 (7) | 0.0855 (19) | |
H5 | 0.2168 | 0.1006 | 0.2416 | 0.103* | |
C6 | 0.1916 (3) | 0.0171 (3) | 0.3647 (7) | 0.091 (2) | |
H6 | 0.1401 | −0.0057 | 0.3568 | 0.109* | |
C7 | 0.3612 (2) | 0.1867 (2) | 0.2334 (5) | 0.0471 (9) | |
H7 | 0.3351 | 0.1839 | 0.1535 | 0.057* | |
C8 | 0.3719 (2) | 0.25488 (19) | 0.3085 (4) | 0.0404 (8) | |
H8A | 0.3237 | 0.2483 | 0.3310 | 0.048* | |
H8B | 0.3985 | 0.2591 | 0.3873 | 0.048* | |
C9 | 0.41529 (18) | 0.32633 (18) | 0.2308 (4) | 0.0337 (7) | |
H9 | 0.4378 | 0.3677 | 0.2918 | 0.040* | |
C10 | 0.47821 (18) | 0.32842 (19) | 0.1526 (4) | 0.0335 (7) | |
C11 | 0.4825 (2) | 0.26296 (19) | 0.1383 (4) | 0.0379 (8) | |
C12 | 0.5384 (2) | 0.2653 (2) | 0.0586 (4) | 0.0451 (10) | |
H12 | 0.5428 | 0.2231 | 0.0502 | 0.054* | |
C13 | 0.5865 (2) | 0.3290 (2) | −0.0069 (4) | 0.0499 (10) | |
H13 | 0.6217 | 0.3289 | −0.0618 | 0.060* | |
C14 | 0.5826 (2) | 0.3935 (2) | 0.0088 (4) | 0.0439 (9) | |
H14 | 0.6151 | 0.4365 | −0.0357 | 0.053* | |
C15 | 0.53053 (19) | 0.39350 (19) | 0.0906 (4) | 0.0345 (8) | |
C16 | 0.53036 (18) | 0.46432 (19) | 0.1164 (4) | 0.0355 (8) | |
C17 | 0.5044 (2) | 0.5032 (2) | 0.0404 (4) | 0.0393 (8) | |
H17 | 0.4844 | 0.4914 | −0.0417 | 0.047* | |
C18 | 0.51507 (19) | 0.56076 (19) | 0.1134 (4) | 0.0374 (8) | |
C19 | 0.4969 (2) | 0.6206 (2) | 0.0963 (4) | 0.0401 (8) | |
C20 | 0.4578 (2) | 0.6207 (2) | −0.0102 (4) | 0.0456 (9) | |
H20 | 0.4425 | 0.5828 | −0.0704 | 0.055* | |
C21 | 0.4409 (2) | 0.6770 (3) | −0.0284 (5) | 0.0552 (11) | |
H21 | 0.4141 | 0.6767 | −0.0999 | 0.066* | |
C22 | 0.4643 (3) | 0.7329 (3) | 0.0603 (6) | 0.0655 (14) | |
H22 | 0.4544 | 0.7714 | 0.0476 | 0.079* | |
C23 | 0.5015 (4) | 0.7325 (3) | 0.1657 (6) | 0.0790 (17) | |
H23 | 0.5157 | 0.7701 | 0.2262 | 0.095* | |
C24 | 0.5191 (3) | 0.6767 (3) | 0.1855 (5) | 0.0671 (14) | |
H24 | 0.5454 | 0.6773 | 0.2579 | 0.080* | |
C25 | 0.3392 (3) | 0.3060 (3) | 0.0210 (5) | 0.0674 (14) | |
H25A | 0.3053 | 0.2529 | 0.0290 | 0.081* | |
H25B | 0.3802 | 0.3141 | −0.0341 | 0.081* | |
C26 | 0.2998 (3) | 0.3441 (4) | −0.0316 (6) | 0.0799 (16) | |
H26A | 0.3271 | 0.3753 | −0.1038 | 0.096* | |
H26B | 0.2503 | 0.3076 | −0.0602 | 0.096* | |
C27 | 0.2955 (3) | 0.3900 (3) | 0.0734 (5) | 0.0704 (14) | |
H27A | 0.2446 | 0.3694 | 0.1028 | 0.085* | |
H27B | 0.3135 | 0.4407 | 0.0446 | 0.085* | |
C28 | 0.3444 (2) | 0.3884 (2) | 0.1797 (4) | 0.0474 (10) | |
H2N | 0.4315 (16) | 0.1573 (18) | 0.174 (3) | 0.017 (8)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.113 (4) | 0.106 (3) | 0.110 (4) | 0.039 (3) | 0.008 (3) | 0.058 (3) |
O2 | 0.088 (3) | 0.109 (4) | 0.173 (6) | −0.005 (3) | −0.006 (4) | 0.069 (4) |
O3 | 0.0723 (18) | 0.0384 (13) | 0.0401 (15) | 0.0317 (13) | −0.0135 (14) | −0.0066 (12) |
O4 | 0.0657 (18) | 0.086 (2) | 0.0577 (19) | 0.0587 (18) | −0.0052 (16) | −0.0198 (18) |
N1 | 0.079 (3) | 0.063 (3) | 0.090 (4) | 0.011 (2) | 0.004 (3) | 0.018 (3) |
N2 | 0.0506 (18) | 0.0267 (15) | 0.062 (2) | 0.0212 (14) | 0.0040 (17) | −0.0034 (15) |
N3 | 0.067 (2) | 0.0429 (17) | 0.0464 (19) | 0.0341 (16) | −0.0109 (18) | −0.0027 (16) |
N4 | 0.0363 (15) | 0.0475 (16) | 0.0394 (17) | 0.0262 (14) | −0.0005 (14) | −0.0013 (14) |
C1 | 0.066 (3) | 0.040 (2) | 0.064 (3) | 0.012 (2) | 0.001 (2) | 0.007 (2) |
C2 | 0.070 (3) | 0.061 (3) | 0.063 (3) | 0.035 (2) | 0.004 (3) | 0.016 (2) |
C3 | 0.052 (2) | 0.057 (2) | 0.068 (3) | 0.026 (2) | −0.002 (2) | 0.014 (2) |
C4 | 0.046 (2) | 0.0338 (18) | 0.058 (3) | 0.0127 (16) | −0.001 (2) | 0.0012 (19) |
C5 | 0.059 (3) | 0.070 (3) | 0.111 (5) | 0.020 (2) | −0.008 (3) | 0.038 (4) |
C6 | 0.056 (3) | 0.068 (3) | 0.117 (5) | 0.008 (3) | −0.013 (3) | 0.029 (4) |
C7 | 0.046 (2) | 0.0363 (19) | 0.055 (2) | 0.0175 (16) | −0.0023 (19) | 0.0047 (18) |
C8 | 0.0396 (18) | 0.0416 (19) | 0.043 (2) | 0.0225 (16) | 0.0057 (17) | 0.0045 (17) |
C9 | 0.0337 (16) | 0.0332 (17) | 0.0379 (18) | 0.0194 (14) | 0.0005 (15) | −0.0010 (15) |
C10 | 0.0337 (17) | 0.0359 (17) | 0.0354 (18) | 0.0207 (15) | −0.0041 (15) | −0.0050 (15) |
C11 | 0.0400 (18) | 0.0380 (18) | 0.044 (2) | 0.0260 (16) | −0.0081 (17) | −0.0073 (17) |
C12 | 0.042 (2) | 0.044 (2) | 0.059 (3) | 0.0297 (18) | −0.007 (2) | −0.016 (2) |
C13 | 0.0383 (19) | 0.059 (2) | 0.056 (3) | 0.0276 (19) | 0.008 (2) | −0.012 (2) |
C14 | 0.0369 (18) | 0.043 (2) | 0.050 (2) | 0.0181 (16) | 0.0077 (18) | −0.0001 (19) |
C15 | 0.0344 (17) | 0.0341 (17) | 0.0376 (18) | 0.0192 (14) | −0.0063 (15) | −0.0017 (15) |
C16 | 0.0317 (17) | 0.0348 (17) | 0.0365 (19) | 0.0139 (14) | 0.0064 (15) | 0.0058 (15) |
C17 | 0.0493 (19) | 0.0404 (18) | 0.0315 (19) | 0.0249 (16) | 0.0008 (16) | 0.0012 (16) |
C18 | 0.0385 (18) | 0.0345 (18) | 0.0376 (19) | 0.0170 (15) | 0.0034 (16) | 0.0050 (15) |
C19 | 0.047 (2) | 0.0351 (18) | 0.042 (2) | 0.0236 (16) | 0.0096 (17) | 0.0055 (16) |
C20 | 0.053 (2) | 0.047 (2) | 0.041 (2) | 0.0287 (19) | 0.0041 (19) | 0.0014 (18) |
C21 | 0.065 (3) | 0.063 (3) | 0.053 (2) | 0.044 (2) | 0.002 (2) | 0.010 (2) |
C22 | 0.093 (4) | 0.055 (3) | 0.070 (3) | 0.053 (3) | 0.012 (3) | 0.010 (3) |
C23 | 0.120 (5) | 0.063 (3) | 0.076 (4) | 0.061 (3) | −0.020 (4) | −0.025 (3) |
C24 | 0.101 (4) | 0.057 (3) | 0.059 (3) | 0.051 (3) | −0.025 (3) | −0.017 (2) |
C25 | 0.078 (3) | 0.086 (3) | 0.058 (3) | 0.055 (3) | −0.024 (3) | −0.020 (3) |
C26 | 0.083 (4) | 0.119 (5) | 0.059 (3) | 0.067 (4) | −0.022 (3) | −0.011 (3) |
C27 | 0.075 (3) | 0.096 (4) | 0.069 (3) | 0.064 (3) | −0.008 (3) | 0.000 (3) |
C28 | 0.042 (2) | 0.062 (2) | 0.051 (2) | 0.035 (2) | 0.0038 (19) | 0.005 (2) |
O1—N1 | 1.217 (6) | C11—C12 | 1.409 (6) |
O2—N1 | 1.209 (7) | C12—C13 | 1.375 (6) |
O3—C18 | 1.344 (5) | C12—H12 | 0.9300 |
O3—N3 | 1.410 (4) | C13—C14 | 1.390 (6) |
O4—C28 | 1.221 (5) | C13—H13 | 0.9300 |
N1—C1 | 1.477 (6) | C14—C15 | 1.378 (5) |
N2—C11 | 1.375 (5) | C14—H14 | 0.9300 |
N2—C7 | 1.454 (5) | C15—C16 | 1.496 (5) |
N2—H2N | 0.87 (3) | C16—C17 | 1.416 (5) |
N3—C16 | 1.306 (5) | C17—C18 | 1.339 (5) |
N4—C28 | 1.349 (5) | C17—H17 | 0.9300 |
N4—C25 | 1.457 (6) | C18—C19 | 1.477 (5) |
N4—C9 | 1.472 (4) | C19—C20 | 1.378 (6) |
C1—C2 | 1.353 (7) | C19—C24 | 1.379 (6) |
C1—C6 | 1.370 (7) | C20—C21 | 1.390 (6) |
C2—C3 | 1.362 (6) | C20—H20 | 0.9300 |
C2—H2 | 0.9300 | C21—C22 | 1.370 (7) |
C3—C4 | 1.381 (6) | C21—H21 | 0.9300 |
C3—H3 | 0.9300 | C22—C23 | 1.346 (8) |
C4—C5 | 1.389 (6) | C22—H22 | 0.9300 |
C4—C7 | 1.514 (6) | C23—C24 | 1.394 (7) |
C5—C6 | 1.378 (8) | C23—H23 | 0.9300 |
C5—H5 | 0.9300 | C24—H24 | 0.9300 |
C6—H6 | 0.9300 | C25—C26 | 1.497 (7) |
C7—C8 | 1.534 (5) | C25—H25A | 0.9700 |
C7—H7 | 0.9800 | C25—H25B | 0.9700 |
C8—C9 | 1.527 (5) | C26—C27 | 1.486 (8) |
C8—H8A | 0.9700 | C26—H26A | 0.9700 |
C8—H8B | 0.9700 | C26—H26B | 0.9700 |
C9—C10 | 1.523 (5) | C27—C28 | 1.515 (7) |
C9—H9 | 0.9800 | C27—H27A | 0.9700 |
C10—C15 | 1.398 (5) | C27—H27B | 0.9700 |
C10—C11 | 1.413 (5) | ||
C18—O3—N3 | 108.2 (3) | C12—C13—H13 | 119.9 |
O2—N1—O1 | 123.8 (5) | C14—C13—H13 | 119.9 |
O2—N1—C1 | 117.2 (5) | C15—C14—C13 | 119.8 (4) |
O1—N1—C1 | 119.0 (5) | C15—C14—H14 | 120.1 |
C11—N2—C7 | 117.3 (3) | C13—C14—H14 | 120.1 |
C11—N2—H2N | 117 (2) | C14—C15—C10 | 121.1 (3) |
C7—N2—H2N | 111.2 (19) | C14—C15—C16 | 119.9 (3) |
C16—N3—O3 | 105.4 (3) | C10—C15—C16 | 118.9 (3) |
C28—N4—C25 | 113.3 (3) | N3—C16—C17 | 111.6 (3) |
C28—N4—C9 | 120.7 (3) | N3—C16—C15 | 118.0 (3) |
C25—N4—C9 | 126.0 (3) | C17—C16—C15 | 130.4 (3) |
C2—C1—C6 | 121.6 (4) | C18—C17—C16 | 104.4 (3) |
C2—C1—N1 | 119.8 (5) | C18—C17—H17 | 127.8 |
C6—C1—N1 | 118.6 (5) | C16—C17—H17 | 127.8 |
C1—C2—C3 | 119.6 (5) | C17—C18—O3 | 110.3 (3) |
C1—C2—H2 | 120.2 | C17—C18—C19 | 133.0 (4) |
C3—C2—H2 | 120.2 | O3—C18—C19 | 116.6 (3) |
C2—C3—C4 | 121.5 (4) | C20—C19—C24 | 119.5 (4) |
C2—C3—H3 | 119.3 | C20—C19—C18 | 119.9 (4) |
C4—C3—H3 | 119.3 | C24—C19—C18 | 120.7 (4) |
C3—C4—C5 | 117.5 (4) | C19—C20—C21 | 120.5 (4) |
C3—C4—C7 | 124.3 (4) | C19—C20—H20 | 119.7 |
C5—C4—C7 | 118.2 (4) | C21—C20—H20 | 119.7 |
C6—C5—C4 | 121.4 (5) | C22—C21—C20 | 119.2 (4) |
C6—C5—H5 | 119.3 | C22—C21—H21 | 120.4 |
C4—C5—H5 | 119.3 | C20—C21—H21 | 120.4 |
C1—C6—C5 | 118.4 (5) | C23—C22—C21 | 120.6 (4) |
C1—C6—H6 | 120.8 | C23—C22—H22 | 119.7 |
C5—C6—H6 | 120.8 | C21—C22—H22 | 119.7 |
N2—C7—C4 | 112.6 (3) | C22—C23—C24 | 121.0 (5) |
N2—C7—C8 | 108.0 (3) | C22—C23—H23 | 119.5 |
C4—C7—C8 | 111.5 (4) | C24—C23—H23 | 119.5 |
N2—C7—H7 | 108.2 | C19—C24—C23 | 119.1 (5) |
C4—C7—H7 | 108.2 | C19—C24—H24 | 120.4 |
C8—C7—H7 | 108.2 | C23—C24—H24 | 120.4 |
C9—C8—C7 | 111.5 (3) | N4—C25—C26 | 105.1 (4) |
C9—C8—H8A | 109.3 | N4—C25—H25A | 110.7 |
C7—C8—H8A | 109.3 | C26—C25—H25A | 110.7 |
C9—C8—H8B | 109.3 | N4—C25—H25B | 110.7 |
C7—C8—H8B | 109.3 | C26—C25—H25B | 110.7 |
H8A—C8—H8B | 108.0 | H25A—C25—H25B | 108.8 |
N4—C9—C10 | 109.5 (3) | C27—C26—C25 | 107.0 (4) |
N4—C9—C8 | 112.0 (3) | C27—C26—H26A | 110.3 |
C10—C9—C8 | 113.2 (3) | C25—C26—H26A | 110.3 |
N4—C9—H9 | 107.3 | C27—C26—H26B | 110.3 |
C10—C9—H9 | 107.3 | C25—C26—H26B | 110.3 |
C8—C9—H9 | 107.3 | H26A—C26—H26B | 108.6 |
C15—C10—C11 | 119.2 (3) | C26—C27—C28 | 105.7 (4) |
C15—C10—C9 | 121.1 (3) | C26—C27—H27A | 110.6 |
C11—C10—C9 | 119.6 (3) | C28—C27—H27A | 110.6 |
N2—C11—C12 | 119.9 (3) | C26—C27—H27B | 110.6 |
N2—C11—C10 | 121.7 (3) | C28—C27—H27B | 110.6 |
C12—C11—C10 | 118.4 (3) | H27A—C27—H27B | 108.7 |
C13—C12—C11 | 121.2 (3) | O4—C28—N4 | 125.3 (4) |
C13—C12—H12 | 119.4 | O4—C28—C27 | 126.7 (4) |
C11—C12—H12 | 119.4 | N4—C28—C27 | 108.0 (4) |
C12—C13—C14 | 120.2 (3) | ||
C18—O3—N3—C16 | −0.6 (4) | C12—C13—C14—C15 | 0.2 (6) |
O2—N1—C1—C2 | −174.9 (7) | C13—C14—C15—C10 | −4.0 (6) |
O1—N1—C1—C2 | 6.3 (8) | C13—C14—C15—C16 | 174.8 (4) |
O2—N1—C1—C6 | 5.8 (9) | C11—C10—C15—C14 | 4.8 (5) |
O1—N1—C1—C6 | −173.0 (6) | C9—C10—C15—C14 | −173.0 (3) |
C6—C1—C2—C3 | 0.9 (8) | C11—C10—C15—C16 | −174.0 (3) |
N1—C1—C2—C3 | −178.4 (5) | C9—C10—C15—C16 | 8.2 (5) |
C1—C2—C3—C4 | 0.1 (8) | O3—N3—C16—C17 | 1.5 (4) |
C2—C3—C4—C5 | −1.0 (8) | O3—N3—C16—C15 | −177.6 (3) |
C2—C3—C4—C7 | 177.5 (5) | C14—C15—C16—N3 | −103.9 (4) |
C3—C4—C5—C6 | 1.1 (10) | C10—C15—C16—N3 | 74.9 (4) |
C7—C4—C5—C6 | −177.5 (6) | C14—C15—C16—C17 | 77.0 (5) |
C2—C1—C6—C5 | −0.8 (10) | C10—C15—C16—C17 | −104.2 (5) |
N1—C1—C6—C5 | 178.5 (6) | N3—C16—C17—C18 | −1.9 (4) |
C4—C5—C6—C1 | −0.2 (11) | C15—C16—C17—C18 | 177.2 (4) |
C11—N2—C7—C4 | −177.3 (4) | C16—C17—C18—O3 | 1.4 (4) |
C11—N2—C7—C8 | −53.8 (5) | C16—C17—C18—C19 | −176.3 (4) |
C3—C4—C7—N2 | 29.5 (6) | N3—O3—C18—C17 | −0.6 (4) |
C5—C4—C7—N2 | −152.0 (5) | N3—O3—C18—C19 | 177.6 (3) |
C3—C4—C7—C8 | −92.1 (5) | C17—C18—C19—C20 | 4.0 (6) |
C5—C4—C7—C8 | 86.4 (6) | O3—C18—C19—C20 | −173.6 (3) |
N2—C7—C8—C9 | 59.0 (4) | C17—C18—C19—C24 | −175.8 (5) |
C4—C7—C8—C9 | −176.8 (3) | O3—C18—C19—C24 | 6.6 (6) |
C28—N4—C9—C10 | −133.2 (3) | C24—C19—C20—C21 | 0.4 (6) |
C25—N4—C9—C10 | 44.6 (5) | C18—C19—C20—C21 | −179.4 (4) |
C28—N4—C9—C8 | 100.4 (4) | C19—C20—C21—C22 | 0.6 (6) |
C25—N4—C9—C8 | −81.8 (5) | C20—C21—C22—C23 | −1.7 (8) |
C7—C8—C9—N4 | 85.5 (4) | C21—C22—C23—C24 | 1.9 (9) |
C7—C8—C9—C10 | −38.9 (4) | C20—C19—C24—C23 | −0.2 (8) |
N4—C9—C10—C15 | 63.8 (4) | C18—C19—C24—C23 | 179.5 (5) |
C8—C9—C10—C15 | −170.5 (3) | C22—C23—C24—C19 | −0.9 (9) |
N4—C9—C10—C11 | −114.0 (4) | C28—N4—C25—C26 | 4.4 (6) |
C8—C9—C10—C11 | 11.8 (5) | C9—N4—C25—C26 | −173.5 (4) |
C7—N2—C11—C12 | −153.3 (4) | N4—C25—C26—C27 | −8.6 (7) |
C7—N2—C11—C10 | 27.5 (6) | C25—C26—C27—C28 | 9.5 (7) |
C15—C10—C11—N2 | 177.3 (3) | C25—N4—C28—O4 | −178.7 (4) |
C9—C10—C11—N2 | −4.9 (5) | C9—N4—C28—O4 | −0.7 (6) |
C15—C10—C11—C12 | −1.9 (5) | C25—N4—C28—C27 | 1.6 (5) |
C9—C10—C11—C12 | 175.9 (3) | C9—N4—C28—C27 | 179.6 (4) |
N2—C11—C12—C13 | 179.0 (4) | C26—C27—C28—O4 | 173.3 (5) |
C10—C11—C12—C13 | −1.8 (6) | C26—C27—C28—N4 | −7.0 (6) |
C11—C12—C13—C14 | 2.7 (6) |
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O4i | 0.87 (3) | 1.99 (3) | 2.859 (6) | 180 (5) |
Symmetry code: (i) y, −x+y, z−1/6. |
Experimental details
Crystal data | |
Chemical formula | C28H24N4O4 |
Mr | 480.51 |
Crystal system, space group | Hexagonal, P61 |
Temperature (K) | 293 |
a, c (Å) | 20.753 (3), 10.446 (2) |
V (Å3) | 3896.2 (11) |
Z | 6 |
Radiation type | Mo Kα |
µ (mm−1) | 0.08 |
Crystal size (mm) | 0.20 × 0.20 × 0.18 |
Data collection | |
Diffractometer | Nonius KappaCCD area-detector diffractometer |
Absorption correction | – |
No. of measured, independent and observed [I > 2σ(I)] reflections | 5951, 3144, 2646 |
Rint | 0.026 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.075, 0.162, 1.22 |
No. of reflections | 3144 |
No. of parameters | 329 |
No. of restraints | 1 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.32, −0.24 |
Computer programs: COLLECT (Nonius, 2000), DENZO-SMN (Otwinowski & Minor, 1997), SIR97 (Altomare et al., 1999), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997) & PLATON (Spek, 2009), WinGX (Farrugia, 1999).
D—H···A | D—H | H···A | D···A | D—H···A |
N2—H2N···O4i | 0.87 (3) | 1.99 (3) | 2.859 (6) | 180 (5) |
Symmetry code: (i) y, −x+y, z−1/6. |
Nitrogen containing heterocycles are indispensable structural units for medicinal chemists (Sankaran et al., 2010). Compounds possessing the quinoline system have wide applications as drugs and pharmaceuticals and also occur as the structural framework in some natural products (Kalita et al., 2006). They also have several pharmacological activities as anti-breast cancer (Shi et al., 2008), selective PDE4 inhibition (Lunniss et al., 2009), immuno modulatory (He et al., 2005), and antimycobacterial agents (Eswaran et al., 2010), among others.
Quinoline and its derivatives represent a major class of heterocycles, and a number of preparations have been known since the late 1800's. The quinoline skeleton is often used for the design of many synthetic compounds with diverse pharmacological properties. Several syntheses of quinolines are known, but due to their importance, the development of new synthetic approaches remains an active research area (Kouznetsov et al., 2005).
The isoxazoles form a relevant group of biologically active compounds with a wide range of applications, including Hsp90 super chaperone complex inhibitors (Taldone et al., 2008), tau aggregation inhibitors for treatment of Alzheimer's disease (Narlawar et al., 2008), mycobacterium tuberculosis pantothenate synthetase inhibitors (Velaparthi et al., 2008) and neuronal nicotinic acetylcholine receptor agonists (Rizzi et al., 2008).
A considerable number of methods to synthesize substituted isoxazoles have been published including approaches based on intramolecular cycloadditions, condensations, and intramolecular cyclizations of amino acids. These methods sometime suffer in their versatility, convenience and yield (Lautens & Roy, 2000). The isoxazole ring can be synthetized by 1, 3-dipolar cyclo-addition reactions between a nitrile oxide and an alkyne, that reaction may be catalyzed by copper(II). Cycloaddition reactions are among the most useful reactions in synthetic and mechanistic organic chemistry (Broggini et al., 2005).
Isoxazoles have a rich chemistry because of their easy reductive cleavage and susceptibility to ring transformations (Kotera et al., 1970). Depending on the substitution patterns, isoxazoles can be used as reagents for the imino-Diels-Alder condensation between anilines, aldehydes and electron-rich alkenes to generate tetrahydroquinolines with different selected substitution patterns.
Due to these facts, the combination of the two heterocyclic rings into a new chemical entity is of interest, as no examples are known in the chemical literature to date.
Many molecules widely used today consist of fusions of rings; an example is the case of penicillins, where incorporation of an isoxazole ring led to the formation of stable derivatives which catalyzed the degradation of gastric acid levels (flucloxacillin and cloxacillin).
We report here the crystal structure of a novel synthetic derivative cis quinoline-isoxazole prepared by imino Diels-Alder cyclo-addition, Scheme 1.
The structure of the title compound, (I) C28H24N4O4, has hexagonal (P61) symmetry and is the trans diastereoisomer of the compound 1-[2-(4-nitrophenyl)-6-(5-phenyl-3-isoxazolyl)-1,2,3,4-tetrahydro-4-quinolinyl]-2-pyrrolidinone-dihydrate, (II) (Gutierrez et al., 2011), so the pyrrolidinone fragment is trans oriented respect to 4-nitrophenyl fragment [C7—C8—C9—N4 torsion angle 85.59 (4)°; -175.(2) (4)° for (II) (mean)]. The most obvious differences between both diastereoisomers are the torsion angles between the isoxazole ring and the benzene and phenyl rings [47.0 (2); 56.4 (2) and 33.3 (2); 11.0 (2)° for (II) 75.4 (2) and 5.8 (3) for (I)]. In both diastereoisomers the six-membered heterocyclic ring has a half-boat conformation (QT= 0.477 (5) Å, θ = 47.7 (5)° ϕ= 76.3 (7)°), Cremer & Pople, 1975. In the crystal, molecules are linked by N— H··· O interactions into chains with graph-set notation C(8) along [001], Fig. 2, Bernstein et al., 1995.