The central cyclohexane ring has a chair conformation. In the crystal, molecules are linked by C—H
O hydrogen bonds and C—H
π interactions, forming layers parallel to (100).
Supporting information
CCDC reference: 1484675
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.005 Å
- Disorder in main residue
- R factor = 0.066
- wR factor = 0.204
- Data-to-parameter ratio = 18.5
checkCIF/PLATON results
No syntax errors found
Alert level B
PLAT230_ALERT_2_B Hirshfeld Test Diff for S2 -- C16 .. 8.5 s.u.
Alert level C
PLAT220_ALERT_2_C Non-Solvent Resd 1 C Ueq(max)/Ueq(min) Range 3.1 Ratio
PLAT230_ALERT_2_C Hirshfeld Test Diff for C26 -- C27 .. 5.3 s.u.
PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00467 Ang.
PLAT905_ALERT_3_C Negative K value in the Analysis of Variance ... -1.698 Report
PLAT910_ALERT_3_C Missing # of FCF Reflection(s) Below Theta(Min) 8 Note
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 10 Report
Alert level G
PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 9 Note
PLAT005_ALERT_5_G No Embedded Refinement Details found in the CIF Please Do !
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 2 Report
PLAT072_ALERT_2_G SHELXL First Parameter in WGHT Unusually Large 0.10 Report
PLAT230_ALERT_2_G Hirshfeld Test Diff for O2A -- C15A .. 6.0 s.u.
PLAT301_ALERT_3_G Main Residue Disorder ............ Percentage = 17 Note
PLAT793_ALERT_4_G The Model has Chirality at C1 (Centro SPGR) R Verify
PLAT793_ALERT_4_G The Model has Chirality at C3 (Centro SPGR) R Verify
PLAT793_ALERT_4_G The Model has Chirality at C4 (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C5 (Centro SPGR) S Verify
PLAT793_ALERT_4_G The Model has Chirality at C6 (Centro SPGR) S Verify
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 6 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 14 Note
PLAT913_ALERT_3_G Missing # of Very Strong Reflections in FCF .... 2 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density 7 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
1 ALERT level B = A potentially serious problem, consider carefully
6 ALERT level C = Check. Ensure it is not caused by an omission or oversight
15 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
7 ALERT type 2 Indicator that the structure model may be wrong or deficient
7 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
2 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2003).
[(1
R,2
S,3
R,4
S,6
S)-2,6-Bis(furan-2-yl)-4-hydroxy-4-(thiophen-2-yl)cyclohexane-1,3-diyl]bis(thiophen-2-ylmethanone)
top
Crystal data top
C28H22O5S3 | F(000) = 1112 |
Mr = 534.64 | Dx = 1.410 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9982 reflections |
a = 14.0915 (11) Å | θ = 3.1–28.2° |
b = 15.8984 (12) Å | µ = 0.33 mm−1 |
c = 11.2964 (7) Å | T = 296 K |
β = 95.421 (2)° | Prism, colourless |
V = 2519.4 (3) Å3 | 0.19 × 0.17 × 0.13 mm |
Z = 4 | |
Data collection top
Bruker APEXII CCD diffractometer | 3960 reflections with I > 2σ(I) |
φ and ω scans | Rint = 0.070 |
Absorption correction: multi-scan (SADABS; Sheldrick, 2003) | θmax = 28.4°, θmin = 3.1° |
Tmin = 0.597, Tmax = 0.746 | h = −18→18 |
52585 measured reflections | k = −21→21 |
6252 independent reflections | l = −15→13 |
Refinement top
Refinement on F2 | 6 restraints |
Least-squares matrix: full | Hydrogen site location: mixed |
R[F2 > 2σ(F2)] = 0.066 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.204 | w = 1/[σ2(Fo2) + (0.101P)2 + 2.3401P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
6252 reflections | Δρmax = 0.75 e Å−3 |
338 parameters | Δρmin = −0.74 e Å−3 |
Special details top
Geometry. Bond distances, angles etc. have been calculated using the
rounded fractional coordinates. All su's are estimated
from the variances of the (full) variance-covariance matrix.
The cell esds are taken into account in the estimation of
distances, angles and torsion angles |
Refinement. Refinement on F2 for ALL reflections except those
flagged by the user for potential systematic errors.
Weighted R-factors wR and all goodnesses of fit S
are based on F2, conventional R-factors R are based
on F, with F set to zero for negative F2. The
observed criterion of F2 > 2sigma(F2) is used only
for calculating -R-factor-obs etc. and is not
relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice
as large as those based on F, and R-factors based on
ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | Occ. (<1) |
S1 | −0.10680 (6) | 0.34243 (6) | 0.32727 (9) | 0.0528 (3) | |
S2 | 0.57614 (7) | 0.33394 (7) | 0.55457 (10) | 0.0661 (4) | |
S3 | 0.38176 (6) | −0.03610 (5) | 0.49813 (8) | 0.0497 (3) | |
O1 | 0.06307 (16) | 0.33764 (15) | 0.50045 (19) | 0.0468 (7) | |
O2A | 0.1462 (2) | 0.51774 (19) | 0.4184 (3) | 0.0541 (10) | 0.832 (5) |
O2B | 0.2243 (12) | 0.4730 (9) | 0.2304 (15) | 0.0541 (10) | 0.168 (5) |
O3A | 0.3783 (2) | 0.30198 (19) | 0.6008 (2) | 0.0419 (8) | 0.832 (5) |
O3B | 0.2474 (13) | 0.4000 (12) | 0.5522 (11) | 0.050 (5) | 0.168 (5) |
O4 | 0.37016 (18) | 0.13400 (15) | 0.59929 (19) | 0.0516 (8) | |
O5 | 0.16291 (18) | 0.14210 (14) | 0.2732 (2) | 0.0522 (8) | |
C1 | 0.2479 (2) | 0.38831 (18) | 0.4265 (3) | 0.0354 (9) | |
C2 | 0.3529 (2) | 0.37285 (18) | 0.4141 (3) | 0.0360 (9) | |
C3 | 0.3902 (2) | 0.29228 (18) | 0.4759 (2) | 0.0339 (8) | |
C4 | 0.33066 (19) | 0.21646 (17) | 0.4248 (2) | 0.0302 (8) | |
C5 | 0.22355 (19) | 0.23054 (17) | 0.4381 (2) | 0.0317 (8) | |
C6 | 0.18765 (19) | 0.31239 (16) | 0.3769 (2) | 0.0304 (8) | |
C7 | 0.0835 (2) | 0.32507 (17) | 0.3991 (3) | 0.0335 (8) | |
C8 | 0.0088 (2) | 0.32100 (18) | 0.3002 (3) | 0.0354 (9) | |
C9 | 0.0139 (2) | 0.3006 (2) | 0.1833 (3) | 0.0433 (10) | |
C10 | −0.0750 (3) | 0.3032 (2) | 0.1164 (3) | 0.0578 (12) | |
C11 | −0.1458 (3) | 0.3250 (2) | 0.1826 (4) | 0.0592 (14) | |
C12A | 0.2159 (3) | 0.46624 (16) | 0.3713 (3) | 0.0372 (10) | 0.832 (5) |
C12B | 0.2063 (16) | 0.4706 (10) | 0.3519 (15) | 0.0372 (10) | 0.168 (5) |
C13A | 0.2394 (3) | 0.5031 (3) | 0.2634 (3) | 0.0602 (17) | 0.832 (5) |
C13B | 0.1550 (17) | 0.5444 (12) | 0.3766 (17) | 0.0602 (17) | 0.168 (5) |
C14A | 0.1842 (3) | 0.5774 (2) | 0.2437 (4) | 0.089 (3) | 0.832 (5) |
C14B | 0.1413 (19) | 0.5924 (11) | 0.270 (2) | 0.089 (3) | 0.168 (5) |
C15A | 0.1266 (3) | 0.58644 (17) | 0.3395 (4) | 0.095 (3) | 0.832 (5) |
C15B | 0.1841 (17) | 0.5483 (12) | 0.1800 (16) | 0.095 (3) | 0.168 (5) |
C16 | 0.4946 (2) | 0.28136 (19) | 0.4597 (3) | 0.0368 (9) | |
C17 | 0.5386 (2) | 0.2391 (2) | 0.3737 (3) | 0.0446 (10) | |
C18 | 0.6395 (3) | 0.2524 (3) | 0.3902 (4) | 0.0607 (14) | |
C19 | 0.6665 (3) | 0.3005 (3) | 0.4807 (4) | 0.0648 (15) | |
C20 | 0.3597 (2) | 0.13466 (19) | 0.4899 (3) | 0.0349 (9) | |
C21 | 0.3687 (2) | 0.05818 (18) | 0.4227 (3) | 0.0364 (9) | |
C22 | 0.3728 (3) | 0.0465 (2) | 0.3024 (3) | 0.0470 (11) | |
C23 | 0.3884 (3) | −0.0380 (2) | 0.2741 (4) | 0.0588 (14) | |
C24 | 0.3939 (3) | −0.0894 (2) | 0.3709 (4) | 0.0564 (13) | |
C25 | 0.1672 (2) | 0.15642 (18) | 0.3943 (3) | 0.0364 (9) | |
C26 | 0.1219 (3) | 0.0946 (2) | 0.4462 (4) | 0.0583 (14) | |
C27 | 0.0863 (3) | 0.0390 (2) | 0.3511 (4) | 0.0651 (14) | |
C28 | 0.1138 (3) | 0.0694 (3) | 0.2513 (4) | 0.0681 (16) | |
H1A | 0.237 (5) | 0.395 (4) | 0.511 (2) | 0.0500* | 0.832 (5) |
H1B | 0.38 (2) | 0.310 (18) | 0.557 (10) | 0.0500* | 0.168 (5) |
H2A | 0.38950 | 0.42030 | 0.44750 | 0.0430* | |
H2B | 0.36240 | 0.36950 | 0.33030 | 0.0430* | |
H3A | 0.39870 | 0.26000 | 0.63700 | 0.0630* | 0.832 (5) |
H3B | 0.26770 | 0.35740 | 0.58690 | 0.0750* | 0.168 (5) |
H4 | 0.33970 | 0.21010 | 0.34030 | 0.0360* | |
H5 | 0.21640 | 0.23630 | 0.52310 | 0.0380* | |
H6 | 0.19240 | 0.30770 | 0.29120 | 0.0370* | |
H9 | 0.07030 | 0.28640 | 0.15160 | 0.0520* | |
H10 | −0.08410 | 0.29140 | 0.03550 | 0.0690* | |
H11 | −0.20920 | 0.32990 | 0.15220 | 0.0710* | |
H13A | 0.28330 | 0.48230 | 0.21420 | 0.0720* | 0.832 (5) |
H13B | 0.13400 | 0.55880 | 0.44960 | 0.0720* | 0.168 (5) |
H14A | 0.18560 | 0.61380 | 0.17940 | 0.1060* | 0.832 (5) |
H14B | 0.10970 | 0.64380 | 0.26150 | 0.1060* | 0.168 (5) |
H15A | 0.08360 | 0.62980 | 0.34890 | 0.1140* | 0.832 (5) |
H15B | 0.18560 | 0.56560 | 0.10150 | 0.1140* | 0.168 (5) |
H17 | 0.50730 | 0.20670 | 0.31360 | 0.0540* | |
H18 | 0.68180 | 0.22900 | 0.34100 | 0.0730* | |
H19 | 0.72980 | 0.31490 | 0.50210 | 0.0780* | |
H22 | 0.36600 | 0.08960 | 0.24650 | 0.0560* | |
H23 | 0.39440 | −0.05700 | 0.19730 | 0.0710* | |
H24 | 0.40330 | −0.14720 | 0.36740 | 0.0670* | |
H26 | 0.11480 | 0.08860 | 0.52680 | 0.0700* | |
H27 | 0.05050 | −0.00950 | 0.35890 | 0.0780* | |
H28 | 0.10130 | 0.04470 | 0.17690 | 0.0820* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0311 (4) | 0.0639 (6) | 0.0647 (6) | 0.0092 (4) | 0.0107 (4) | 0.0048 (4) |
S2 | 0.0504 (6) | 0.0790 (7) | 0.0673 (7) | −0.0109 (5) | −0.0031 (5) | 0.0003 (5) |
S3 | 0.0463 (5) | 0.0395 (4) | 0.0629 (6) | 0.0047 (3) | 0.0033 (4) | 0.0151 (4) |
O1 | 0.0406 (12) | 0.0624 (14) | 0.0392 (12) | 0.0037 (11) | 0.0140 (10) | −0.0035 (10) |
O2A | 0.0456 (16) | 0.0549 (18) | 0.064 (2) | 0.0046 (14) | 0.0166 (14) | −0.0075 (15) |
O2B | 0.0456 (16) | 0.0549 (18) | 0.064 (2) | 0.0046 (14) | 0.0166 (14) | −0.0075 (15) |
O3A | 0.0450 (15) | 0.0512 (16) | 0.0295 (13) | 0.0019 (12) | 0.0033 (13) | −0.0089 (13) |
O3B | 0.055 (9) | 0.060 (9) | 0.035 (7) | 0.003 (7) | 0.007 (7) | −0.011 (8) |
O4 | 0.0655 (16) | 0.0536 (14) | 0.0353 (12) | 0.0054 (12) | 0.0029 (11) | 0.0087 (10) |
O5 | 0.0627 (16) | 0.0415 (12) | 0.0497 (13) | −0.0028 (11) | −0.0083 (11) | −0.0046 (10) |
C1 | 0.0337 (15) | 0.0335 (14) | 0.0395 (16) | −0.0014 (12) | 0.0065 (13) | −0.0067 (12) |
C2 | 0.0298 (14) | 0.0328 (14) | 0.0454 (17) | −0.0019 (11) | 0.0034 (12) | −0.0019 (12) |
C3 | 0.0315 (14) | 0.0365 (15) | 0.0335 (15) | −0.0007 (11) | 0.0028 (12) | −0.0015 (12) |
C4 | 0.0284 (14) | 0.0320 (14) | 0.0303 (14) | 0.0006 (11) | 0.0032 (11) | −0.0003 (11) |
C5 | 0.0306 (14) | 0.0325 (14) | 0.0322 (14) | 0.0012 (11) | 0.0044 (11) | 0.0010 (11) |
C6 | 0.0282 (14) | 0.0313 (13) | 0.0325 (14) | 0.0007 (11) | 0.0067 (11) | −0.0026 (11) |
C7 | 0.0309 (14) | 0.0301 (14) | 0.0403 (16) | 0.0012 (11) | 0.0084 (12) | 0.0005 (11) |
C8 | 0.0278 (14) | 0.0330 (14) | 0.0458 (17) | 0.0023 (11) | 0.0061 (12) | 0.0022 (12) |
C9 | 0.0369 (16) | 0.0456 (18) | 0.0470 (18) | 0.0050 (14) | 0.0026 (14) | −0.0055 (14) |
C10 | 0.056 (2) | 0.059 (2) | 0.055 (2) | 0.0027 (18) | −0.0126 (18) | −0.0101 (17) |
C11 | 0.0371 (19) | 0.059 (2) | 0.078 (3) | 0.0043 (16) | −0.0125 (18) | 0.0010 (19) |
C12A | 0.0323 (18) | 0.0281 (14) | 0.051 (2) | 0.0009 (12) | 0.0032 (16) | −0.0054 (14) |
C12B | 0.0323 (18) | 0.0281 (14) | 0.051 (2) | 0.0009 (12) | 0.0032 (16) | −0.0054 (14) |
C13A | 0.060 (3) | 0.052 (3) | 0.070 (3) | 0.014 (2) | 0.014 (2) | 0.022 (2) |
C13B | 0.060 (3) | 0.052 (3) | 0.070 (3) | 0.014 (2) | 0.014 (2) | 0.022 (2) |
C14A | 0.069 (4) | 0.054 (3) | 0.137 (6) | −0.006 (3) | −0.020 (4) | 0.041 (3) |
C14B | 0.069 (4) | 0.054 (3) | 0.137 (6) | −0.006 (3) | −0.020 (4) | 0.041 (3) |
C15A | 0.063 (4) | 0.047 (3) | 0.167 (7) | 0.011 (3) | −0.032 (4) | −0.013 (4) |
C15B | 0.063 (4) | 0.047 (3) | 0.167 (7) | 0.011 (3) | −0.032 (4) | −0.013 (4) |
C16 | 0.0291 (14) | 0.0404 (16) | 0.0402 (16) | −0.0010 (12) | 0.0001 (12) | 0.0064 (12) |
C17 | 0.0301 (16) | 0.0478 (18) | 0.057 (2) | 0.0030 (13) | 0.0097 (14) | 0.0030 (15) |
C18 | 0.0379 (19) | 0.067 (2) | 0.080 (3) | 0.0084 (17) | 0.0205 (18) | 0.017 (2) |
C19 | 0.0372 (19) | 0.078 (3) | 0.077 (3) | −0.0060 (18) | −0.0054 (18) | 0.025 (2) |
C20 | 0.0290 (14) | 0.0395 (15) | 0.0360 (16) | −0.0002 (12) | 0.0028 (12) | 0.0034 (12) |
C21 | 0.0291 (14) | 0.0351 (15) | 0.0446 (17) | 0.0043 (12) | 0.0015 (12) | 0.0058 (12) |
C22 | 0.057 (2) | 0.0389 (17) | 0.0451 (18) | 0.0042 (15) | 0.0043 (15) | 0.0027 (14) |
C23 | 0.069 (3) | 0.046 (2) | 0.062 (2) | 0.0062 (18) | 0.0095 (19) | −0.0109 (17) |
C24 | 0.049 (2) | 0.0344 (17) | 0.085 (3) | 0.0054 (15) | 0.0028 (18) | 0.0012 (17) |
C25 | 0.0279 (14) | 0.0341 (14) | 0.0469 (17) | 0.0036 (12) | 0.0027 (12) | 0.0012 (12) |
C26 | 0.053 (2) | 0.0427 (19) | 0.083 (3) | −0.0021 (16) | 0.0257 (19) | 0.0041 (18) |
C27 | 0.057 (2) | 0.0389 (19) | 0.099 (3) | −0.0146 (17) | 0.005 (2) | −0.007 (2) |
C28 | 0.070 (3) | 0.049 (2) | 0.081 (3) | −0.0066 (19) | −0.016 (2) | −0.010 (2) |
Geometric parameters (Å, º) top
S1—C8 | 1.720 (3) | C14A—C15A | 1.420 (6) |
S1—C11 | 1.697 (5) | C14B—C15B | 1.42 (3) |
S2—C16 | 1.713 (3) | C16—C17 | 1.376 (4) |
S2—C19 | 1.674 (4) | C17—C18 | 1.432 (5) |
S3—C21 | 1.725 (3) | C18—C19 | 1.304 (6) |
S3—C24 | 1.691 (4) | C20—C21 | 1.445 (4) |
O1—C7 | 1.223 (4) | C21—C22 | 1.378 (5) |
O2A—C12A | 1.420 (5) | C22—C23 | 1.403 (5) |
O2A—C15A | 1.420 (5) | C23—C24 | 1.361 (6) |
O2B—C12B | 1.42 (2) | C25—C26 | 1.337 (5) |
O2B—C15B | 1.42 (2) | C26—C27 | 1.444 (6) |
O3A—C3 | 1.445 (3) | C27—C28 | 1.318 (6) |
O3B—C1 | 1.433 (13) | C1—H1A | 0.99 (3) |
O4—C20 | 1.231 (4) | C2—H2A | 0.9700 |
O5—C25 | 1.383 (4) | C2—H2B | 0.9700 |
O5—C28 | 1.358 (5) | C3—H1B | 0.98 (16) |
O3A—H3A | 0.8200 | C4—H4 | 0.9800 |
O3B—H3B | 0.8200 | C5—H5 | 0.9800 |
C1—C2 | 1.519 (4) | C6—H6 | 0.9800 |
C1—C12B | 1.635 (17) | C9—H9 | 0.9300 |
C1—C12A | 1.440 (4) | C10—H10 | 0.9300 |
C1—C6 | 1.550 (4) | C11—H11 | 0.9300 |
C2—C3 | 1.528 (4) | C13A—H13A | 0.9300 |
C3—C16 | 1.510 (4) | C13B—H13B | 0.9300 |
C3—C4 | 1.549 (4) | C14A—H14A | 0.9300 |
C4—C5 | 1.547 (4) | C14B—H14B | 0.9300 |
C4—C20 | 1.531 (4) | C15A—H15A | 0.9300 |
C5—C6 | 1.537 (4) | C15B—H15B | 0.9300 |
C5—C25 | 1.480 (4) | C17—H17 | 0.9300 |
C6—C7 | 1.526 (4) | C18—H18 | 0.9300 |
C7—C8 | 1.462 (4) | C19—H19 | 0.9300 |
C8—C9 | 1.368 (5) | C22—H22 | 0.9300 |
C9—C10 | 1.401 (5) | C23—H23 | 0.9300 |
C10—C11 | 1.348 (6) | C24—H24 | 0.9300 |
C12A—C13A | 1.420 (5) | C26—H26 | 0.9300 |
C12B—C13B | 1.42 (3) | C27—H27 | 0.9300 |
C13A—C14A | 1.420 (6) | C28—H28 | 0.9300 |
C13B—C14B | 1.42 (3) | | |
| | | |
C8—S1—C11 | 91.29 (19) | C21—C22—C23 | 112.1 (3) |
C16—S2—C19 | 91.72 (19) | C22—C23—C24 | 113.0 (4) |
C21—S3—C24 | 91.73 (17) | S3—C24—C23 | 112.3 (3) |
C12A—O2A—C15A | 108.0 (3) | O5—C25—C26 | 109.6 (3) |
C12B—O2B—C15B | 108.0 (15) | C5—C25—C26 | 134.6 (3) |
C25—O5—C28 | 107.1 (3) | O5—C25—C5 | 115.7 (2) |
C3—O3A—H3A | 109.00 | C25—C26—C27 | 105.7 (4) |
C1—O3B—H3B | 109.00 | C26—C27—C28 | 107.6 (3) |
O3B—C1—C12B | 111.8 (10) | O5—C28—C27 | 110.0 (4) |
O3B—C1—C2 | 102.0 (8) | C2—C1—H1A | 110 (4) |
O3B—C1—C6 | 113.9 (8) | C6—C1—H1A | 108 (4) |
C2—C1—C12B | 112.8 (8) | C12A—C1—H1A | 105 (4) |
C6—C1—C12A | 112.0 (3) | C1—C2—H2A | 109.00 |
C6—C1—C12B | 106.2 (7) | C1—C2—H2B | 109.00 |
C2—C1—C12A | 111.5 (3) | C3—C2—H2A | 109.00 |
C2—C1—C6 | 110.2 (2) | C3—C2—H2B | 109.00 |
C1—C2—C3 | 112.9 (2) | H2A—C2—H2B | 108.00 |
O3A—C3—C2 | 106.9 (2) | C2—C3—H1B | 96 (14) |
C2—C3—C4 | 109.4 (2) | C4—C3—H1B | 117 (15) |
O3A—C3—C4 | 109.8 (2) | C16—C3—H1B | 112 (17) |
O3A—C3—C16 | 109.6 (2) | C3—C4—H4 | 109.00 |
C4—C3—C16 | 111.4 (2) | C5—C4—H4 | 109.00 |
C2—C3—C16 | 109.8 (2) | C20—C4—H4 | 109.00 |
C3—C4—C20 | 111.8 (2) | C4—C5—H5 | 107.00 |
C3—C4—C5 | 110.5 (2) | C6—C5—H5 | 108.00 |
C5—C4—C20 | 107.2 (2) | C25—C5—H5 | 107.00 |
C4—C5—C25 | 110.5 (2) | C1—C6—H6 | 109.00 |
C4—C5—C6 | 111.2 (2) | C5—C6—H6 | 109.00 |
C6—C5—C25 | 112.4 (2) | C7—C6—H6 | 109.00 |
C5—C6—C7 | 108.6 (2) | C8—C9—H9 | 124.00 |
C1—C6—C7 | 109.9 (2) | C10—C9—H9 | 124.00 |
C1—C6—C5 | 110.6 (2) | C9—C10—H10 | 124.00 |
O1—C7—C6 | 119.4 (3) | C11—C10—H10 | 124.00 |
O1—C7—C8 | 120.4 (3) | S1—C11—H11 | 124.00 |
C6—C7—C8 | 120.2 (3) | C10—C11—H11 | 124.00 |
S1—C8—C7 | 118.8 (2) | C12A—C13A—H13A | 126.00 |
C7—C8—C9 | 130.4 (3) | C14A—C13A—H13A | 126.00 |
S1—C8—C9 | 110.8 (2) | C12B—C13B—H13B | 126.00 |
C8—C9—C10 | 112.8 (3) | C14B—C13B—H13B | 126.00 |
C9—C10—C11 | 112.3 (3) | C15A—C14A—H14A | 126.00 |
S1—C11—C10 | 112.8 (3) | C13A—C14A—H14A | 126.00 |
O2A—C12A—C13A | 108.0 (3) | C15B—C14B—H14B | 126.00 |
O2A—C12A—C1 | 122.2 (3) | C13B—C14B—H14B | 126.00 |
C1—C12A—C13A | 129.7 (3) | O2A—C15A—H15A | 126.00 |
O2B—C12B—C1 | 115.6 (13) | C14A—C15A—H15A | 126.00 |
O2B—C12B—C13B | 108.0 (15) | C14B—C15B—H15B | 126.00 |
C1—C12B—C13B | 136.4 (15) | O2B—C15B—H15B | 126.00 |
C12A—C13A—C14A | 108.0 (3) | C18—C17—H17 | 125.00 |
C12B—C13B—C14B | 107.9 (17) | C16—C17—H17 | 125.00 |
C13A—C14A—C15A | 108.0 (3) | C17—C18—H18 | 123.00 |
C13B—C14B—C15B | 108.0 (17) | C19—C18—H18 | 123.00 |
O2A—C15A—C14A | 108.0 (3) | S2—C19—H19 | 123.00 |
O2B—C15B—C14B | 108.1 (16) | C18—C19—H19 | 123.00 |
S2—C16—C17 | 111.1 (2) | C23—C22—H22 | 124.00 |
C3—C16—C17 | 130.6 (3) | C21—C22—H22 | 124.00 |
S2—C16—C3 | 118.2 (2) | C22—C23—H23 | 124.00 |
C16—C17—C18 | 110.1 (3) | C24—C23—H23 | 123.00 |
C17—C18—C19 | 113.7 (4) | S3—C24—H24 | 124.00 |
S2—C19—C18 | 113.4 (3) | C23—C24—H24 | 124.00 |
O4—C20—C4 | 119.4 (3) | C27—C26—H26 | 127.00 |
O4—C20—C21 | 120.8 (3) | C25—C26—H26 | 127.00 |
C4—C20—C21 | 119.7 (3) | C26—C27—H27 | 126.00 |
S3—C21—C20 | 118.8 (3) | C28—C27—H27 | 126.00 |
S3—C21—C22 | 110.9 (2) | C27—C28—H28 | 125.00 |
C20—C21—C22 | 130.2 (3) | O5—C28—H28 | 125.00 |
| | | |
C11—S1—C8—C7 | −179.5 (2) | C3—C4—C20—O4 | 46.3 (3) |
C11—S1—C8—C9 | −0.6 (3) | C3—C4—C5—C6 | 57.1 (2) |
C8—S1—C11—C10 | 0.5 (3) | C5—C4—C20—O4 | −75.0 (3) |
C19—S2—C16—C3 | −175.7 (3) | C20—C4—C5—C25 | −55.4 (3) |
C19—S2—C16—C17 | 0.2 (3) | C4—C5—C6—C7 | −176.9 (2) |
C16—S2—C19—C18 | −0.3 (4) | C6—C5—C25—O5 | 57.1 (3) |
C24—S3—C21—C22 | 0.7 (3) | C6—C5—C25—C26 | −127.6 (4) |
C24—S3—C21—C20 | −176.8 (3) | C25—C5—C6—C7 | 58.7 (3) |
C21—S3—C24—C23 | 0.0 (3) | C25—C5—C6—C1 | 179.3 (2) |
C15A—O2A—C12A—C1 | −176.4 (3) | C4—C5—C25—O5 | −67.7 (3) |
C12A—O2A—C15A—C14A | 0.0 (4) | C4—C5—C6—C1 | −56.2 (3) |
C15A—O2A—C12A—C13A | 0.0 (4) | C4—C5—C25—C26 | 107.5 (4) |
C28—O5—C25—C5 | 176.3 (3) | C1—C6—C7—O1 | −55.6 (3) |
C28—O5—C25—C26 | −0.2 (4) | C5—C6—C7—O1 | 65.5 (3) |
C25—O5—C28—C27 | 1.1 (4) | C5—C6—C7—C8 | −113.6 (3) |
C6—C1—C12A—O2A | 90.7 (4) | C1—C6—C7—C8 | 125.3 (3) |
C2—C1—C12A—C13A | 39.2 (5) | C6—C7—C8—C9 | 5.6 (5) |
C2—C1—C6—C5 | 55.4 (3) | O1—C7—C8—C9 | −173.5 (3) |
C6—C1—C12A—C13A | −84.9 (5) | O1—C7—C8—S1 | 5.1 (4) |
C12A—C1—C6—C7 | −59.9 (3) | C6—C7—C8—S1 | −175.8 (2) |
C12A—C1—C6—C5 | −179.8 (3) | S1—C8—C9—C10 | 0.6 (4) |
C12A—C1—C2—C3 | 177.8 (3) | C7—C8—C9—C10 | 179.3 (3) |
C2—C1—C6—C7 | 175.3 (2) | C8—C9—C10—C11 | −0.2 (4) |
C2—C1—C12A—O2A | −145.2 (3) | C9—C10—C11—S1 | −0.3 (4) |
C6—C1—C2—C3 | −57.1 (3) | C1—C12A—C13A—C14A | 176.0 (4) |
C1—C2—C3—C16 | −180.0 (3) | O2A—C12A—C13A—C14A | 0.0 (4) |
C1—C2—C3—O3A | −61.2 (3) | C12A—C13A—C14A—C15A | 0.0 (5) |
C1—C2—C3—C4 | 57.5 (3) | C13A—C14A—C15A—O2A | 0.0 (4) |
C2—C3—C4—C5 | −56.4 (3) | S2—C16—C17—C18 | −0.1 (4) |
C2—C3—C16—C17 | −92.0 (4) | C3—C16—C17—C18 | 175.2 (3) |
O3A—C3—C4—C20 | −58.7 (3) | C16—C17—C18—C19 | −0.1 (5) |
C2—C3—C16—S2 | 83.0 (3) | C17—C18—C19—S2 | 0.2 (5) |
O3A—C3—C4—C5 | 60.6 (3) | O4—C20—C21—C22 | −170.1 (4) |
C16—C3—C4—C20 | 62.9 (3) | O4—C20—C21—S3 | 6.8 (4) |
C2—C3—C4—C20 | −175.6 (2) | C4—C20—C21—C22 | 13.8 (5) |
O3A—C3—C16—C17 | 150.9 (3) | C4—C20—C21—S3 | −169.3 (2) |
O3A—C3—C16—S2 | −34.1 (3) | S3—C21—C22—C23 | −1.3 (4) |
C4—C3—C16—C17 | 29.3 (4) | C20—C21—C22—C23 | 175.8 (3) |
C4—C3—C16—S2 | −155.75 (19) | C21—C22—C23—C24 | 1.3 (5) |
C16—C3—C4—C5 | −177.9 (2) | C22—C23—C24—S3 | −0.8 (5) |
C3—C4—C5—C25 | −177.4 (2) | O5—C25—C26—C27 | −0.7 (4) |
C20—C4—C5—C6 | 179.2 (2) | C5—C25—C26—C27 | −176.2 (3) |
C5—C4—C20—C21 | 101.2 (3) | C25—C26—C27—C28 | 1.4 (5) |
C3—C4—C20—C21 | −137.6 (3) | C26—C27—C28—O5 | −1.5 (5) |
Hydrogen-bond geometry (Å, º) topCg1 and Cg2 are the centroids of the S1/C8–C11 and S2/C16–C19 thiophene
rings, respectively. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3A—H3A···O4 | 0.82 | 2.08 | 2.673 (4) | 129 |
C5—H5···O3A | 0.98 | 2.59 | 2.944 (4) | 102 |
C22—H22···O3Ai | 0.93 | 2.40 | 3.321 (4) | 170 |
C24—H24···Cg2ii | 0.93 | 2.95 | 3.650 (4) | 133 |
C27—H27···Cg1iii | 0.93 | 2.89 | 3.612 (4) | 135 |
C14B—H14B···Cg1iv | 0.93 | 2.87 | 3.772 (19) | 163 |
Symmetry codes: (i) x, −y+1/2, z−1/2; (ii) −x+1, −y, −z+1; (iii) −x, y−1/2, −z+1/2; (iv) −x, y+1/2, −z+1/2. |
Comparison of geometrical parameters from the X-ray study and semi-empirical
quantum-mechanical CNDO/2 calculations (Å, °) topBond | X-ray | CNDO/2 |
S1—C8 | 1.720 (3) | 1.7707 |
S1—C11 | 1.698 (4) | 1.7665 |
S2—C16 | 1.713 (3) | 1.7781 |
S2—C19 | 1.673 (5) | 1.7628 |
S3—C21 | 1.726 (3) | 1.7689 |
S3—C24 | 1.691 (4) | 1.7653 |
O1—C7 | 1.223 (4) | 1.2131 |
O2A—C12A | 1.420 (5) | 1.3602 |
O2A—C15A | 1.420 (5) | 1.3577 |
O3A—C3 | 1.445 (3) | 1.4203 |
O4—C20 | 1.231 (4) | 1.2136 |
O5—C28 | 1.358 (5) | 1.3559 |
O5—C25 | 1.383 (4) | 1.3600 |
| | |
C2—C1—C12A | 112.8 (8) | 112.15 |
C2—C1—C6 | 110.2 (2) | 113.29 |
C6—C1—C12A | 112.0 (3) | 111.15 |
C2—C3—C16 | 109.8 (2) | 113.64 |
C2—C3—C4 | 109.4 (2) | 110.56 |
C4—C3—C16 | 111.4 (2) | 110.66 |
O3A—C3—C16 | 109.6 (2) | 106.60 |
C3—C4—C20 | 111.8 (2) | 111.33 |
C5—C4—C20 | 107.2 (2) | 109.38 |
C3—C4—C5 | 110.5 (2) | 112.83 |
C6—C5—C25 | 112.4 (2) | 111.32 |
C4—C5—C25 | 110.5 (2) | 111.87 |
C4—C5—C6 | 111.2 (2) | 112.50 |
C5—C6—C7 | 108.6 (2) | 113.14 |
C1—C6—C7 | 109.9 (2) | 109.87 |
C1—C6—C5 | 110.6 (2) | 107.85 |
O1—C7—C8 | 120.4 (3) | 121.83 |
C6—C7—C8 | 120.2 (3) | 118.24 |
O1—C7—C6 | 119.4 (3) | 119.93 |
O4—C20—C4 | 119.4 (3) | 119.14 |
C4—C20—C21 | 119.7 (3) | 119.62 |
O4—C20—C21 | 120.8 (3) | 121.24 |