



Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S0108270105031744/sk1869sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S0108270105031744/sk1869Isup2.hkl |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S0108270105031744/sk1869IIsup3.hkl |
CCDC references: 290584; 290585
For the preparation of (I), the phosphate S{(6 - tBu-4-Me—C6H2O)2}P(O)OH (m.p. > 523 K; Chandrasekaran et al., 1999) was prepared by a procedure similar to that used to prepare CH2{(6 - tBu-4-Me—C6H2O)2}P(O)OH (Kumara Swamy et al., 2001). The phosphate (0.2 g, 0.4 mmol) was dissolved in chloroform (5 ml), and imidazole (0.032 g, 0.4 mmol) in chloroform (2 ml) was added slowly to obtain a clear solution followed by (immediate) crystallization of (I). A small amount (ca 5%) of the same compound also crystallized along with (II). M.p. > 543 K. IR (Nujol mull, cm−1): 3158 (sharp), 1460, 1253. 1H NMR (400 MHz, DMSO-d6, p.p.m.): 1.35 (s, 18H, tBu—H), 2.19 (s, 6H, Ar—CH3), 7.08, 7.29, 7.46 (s each, 6H, Ar—H + imidazolyl-H), 8.71 (s, 1H, imidazolyl-H). The signals for imidazolyl N-bound H atoms were very broad. The solubility was too low for recording a satisfactory 13C NMR spectrum. 31P NMR (160 MHz, DMSO-d6, p.p.m.): −10.6. For the preparation of (II), to a stirred solution S{(6 - tBu-4-Me—C6H2O)2}PCl (0.92 g, 2.2 mmol) in toluene, diisopropyl azodicarboxylate (0.45 g, 2.2 mmol) was added dropwise at 195 K and the contents were stirred overnight. Imidazole (0.15 g, 2.2 mmol) and triethylamine (0.22 g, 2.2 mmol) in toluene (5 ml) were then added. The mixture was stirred for a further 12 h and then filtered, and the solvent was evaporated in vacuo. The residue upon crystallization from dichloromethane–hexane mixture in air yielded compound (II) [0.3 g, 21.4%; a small quantity of (I) also crystallized, which could be separated by hand-picking]. M.p. 464–466 K (charring). IR (Nujol mull, cm−1): 3223 (br), 3152, 1732, 1711, 1464, 1256. 1H NMR (400 MHz, DMSO-d6, p.p.m.): 1.15 {d, 3J(HH) = 5.2 Hz, 12H, [CH(CH3)2]}, 1.34 (s, 18H, tBu—H), 2.18 (s, 6H, Ar—CH3), 2.48 (s, 2H, N—H), 4.74 [m, 2H, CH(CH3)2], 7.07 and 7.45 (s each, 5H, Ar—H + imidazolyl-H), 8.65 and 8.84 (s each, 2H, imidazolyl-H). The signals for imidazolyl N-bound H atoms were very broad. The solubility was too low for recording a satisfactory 13C NMR spectrum. 31P NMR (160 MHz, DMSO-d6, p.p.m.): −10.5.
The N-bound H atom of the hydrazine residue in (II) was located in a difference Fourier map and refined isotropically. All other H atoms were placed geometrically and refined using a riding model, with C—H distances constrained to 0.98 Å (methine), 0.96 Å (CH3) and 0.93 Å (aromatic), N—H distances constrained to 0.86 Å (imidazolyl), and Uiso(H) values of 1.5Ueq(C) for methyl groups and 1.2Ueq(C,N) otherwise. Compound (I) is not chiral but crystallized in a non-centrosymmetric space group and hence the absolute configuration for this structure is not relevant.
For both compounds, data collection: SMART (Bruker, 2000); cell refinement: SMART; data reduction: SAINT (Bruker, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 1997); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997); molecular graphics: SHELXTL-NT (Sheldrick, 1999); software used to prepare material for publication: SHELXTL-NT.
C3H5N2+·C22H28O4PS− | F(000) = 1040 |
Mr = 488.56 | Dx = 1.271 Mg m−3 |
Monoclinic, Cc | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: C-2yc | Cell parameters from 3061 reflections |
a = 7.6466 (6) Å | θ = 2.5–24.6° |
b = 17.0714 (12) Å | µ = 0.22 mm−1 |
c = 19.7596 (14) Å | T = 295 K |
β = 98.060 (1)° | Needle, colorless |
V = 2553.9 (3) Å3 | 0.44 × 0.30 × 0.22 mm |
Z = 4 |
Bruker SMART CCD area-detector diffractometer | 5940 independent reflections |
Radiation source: fine-focus sealed tube | 4683 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.035 |
ϕ and ω scans | θmax = 28.3°, θmin = 2.1° |
Absorption correction: empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | h = −10→10 |
Tmin = 0.762, Tmax = 0.953 | k = −21→21 |
14692 measured reflections | l = −26→25 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
wR(F2) = 0.087 | w = 1/[σ2(Fo2) + (0.0459P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.93 | (Δ/σ)max = 0.032 |
5940 reflections | Δρmax = 0.29 e Å−3 |
306 parameters | Δρmin = −0.22 e Å−3 |
2 restraints | Absolute structure: Flack (1983), 2760 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.00 (5) |
C3H5N2+·C22H28O4PS− | V = 2553.9 (3) Å3 |
Mr = 488.56 | Z = 4 |
Monoclinic, Cc | Mo Kα radiation |
a = 7.6466 (6) Å | µ = 0.22 mm−1 |
b = 17.0714 (12) Å | T = 295 K |
c = 19.7596 (14) Å | 0.44 × 0.30 × 0.22 mm |
β = 98.060 (1)° |
Bruker SMART CCD area-detector diffractometer | 5940 independent reflections |
Absorption correction: empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | 4683 reflections with I > 2σ(I) |
Tmin = 0.762, Tmax = 0.953 | Rint = 0.035 |
14692 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | H-atom parameters constrained |
wR(F2) = 0.087 | Δρmax = 0.29 e Å−3 |
S = 0.93 | Δρmin = −0.22 e Å−3 |
5940 reflections | Absolute structure: Flack (1983), 2760 Friedel pairs |
306 parameters | Absolute structure parameter: 0.00 (5) |
2 restraints |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
P1 | 0.54345 (7) | 0.37182 (3) | 0.37566 (3) | 0.03995 (14) | |
S1 | 0.74489 (7) | 0.54321 (4) | 0.45742 (3) | 0.05102 (16) | |
O1 | 0.5406 (2) | 0.39253 (9) | 0.45487 (7) | 0.0433 (4) | |
O2 | 0.71946 (19) | 0.41194 (8) | 0.35522 (8) | 0.0446 (4) | |
O3 | 0.3879 (2) | 0.40643 (8) | 0.33437 (8) | 0.0458 (4) | |
O4 | 0.5756 (2) | 0.28704 (8) | 0.37459 (9) | 0.0558 (4) | |
C1 | 0.4506 (3) | 0.45625 (12) | 0.47710 (10) | 0.0390 (5) | |
C2 | 0.2920 (3) | 0.44438 (13) | 0.50417 (11) | 0.0400 (5) | |
C3 | 0.2108 (3) | 0.51174 (13) | 0.52571 (11) | 0.0440 (5) | |
H3 | 0.1045 | 0.5060 | 0.5430 | 0.053* | |
C4 | 0.2800 (3) | 0.58665 (13) | 0.52265 (12) | 0.0473 (6) | |
C5 | 0.4402 (3) | 0.59468 (13) | 0.49905 (12) | 0.0448 (5) | |
H5 | 0.4918 | 0.6440 | 0.4984 | 0.054* | |
C6 | 0.5254 (3) | 0.53035 (13) | 0.47624 (10) | 0.0406 (5) | |
C7 | 0.2108 (4) | 0.36348 (14) | 0.51318 (13) | 0.0513 (6) | |
C8 | 0.0495 (4) | 0.36733 (15) | 0.55093 (16) | 0.0656 (8) | |
H8A | −0.0414 | 0.3978 | 0.5248 | 0.098* | |
H8B | 0.0823 | 0.3913 | 0.5948 | 0.098* | |
H8C | 0.0065 | 0.3153 | 0.5569 | 0.098* | |
C9 | 0.3492 (4) | 0.31146 (19) | 0.55626 (19) | 0.0916 (12) | |
H9A | 0.2973 | 0.2617 | 0.5644 | 0.137* | |
H9B | 0.3882 | 0.3367 | 0.5992 | 0.137* | |
H9C | 0.4482 | 0.3036 | 0.5321 | 0.137* | |
C10 | 0.1470 (5) | 0.32512 (19) | 0.44296 (16) | 0.0885 (11) | |
H10A | 0.0846 | 0.2776 | 0.4497 | 0.133* | |
H10B | 0.2472 | 0.3134 | 0.4204 | 0.133* | |
H10C | 0.0699 | 0.3606 | 0.4154 | 0.133* | |
C11 | 0.1837 (4) | 0.65727 (15) | 0.54510 (17) | 0.0682 (8) | |
H11A | 0.2392 | 0.7042 | 0.5319 | 0.102* | |
H11B | 0.1877 | 0.6564 | 0.5939 | 0.102* | |
H11C | 0.0629 | 0.6561 | 0.5238 | 0.102* | |
C12 | 0.7244 (3) | 0.55170 (13) | 0.36694 (11) | 0.0418 (5) | |
C13 | 0.7307 (3) | 0.62591 (14) | 0.33836 (14) | 0.0494 (6) | |
H13 | 0.7293 | 0.6698 | 0.3662 | 0.059* | |
C14 | 0.7390 (3) | 0.63567 (14) | 0.27041 (13) | 0.0501 (6) | |
C15 | 0.7475 (3) | 0.56845 (14) | 0.23111 (13) | 0.0489 (6) | |
H15 | 0.7576 | 0.5748 | 0.1851 | 0.059* | |
C16 | 0.7419 (3) | 0.49255 (13) | 0.25613 (11) | 0.0423 (5) | |
C17 | 0.7243 (3) | 0.48561 (12) | 0.32548 (11) | 0.0391 (5) | |
C18 | 0.7612 (3) | 0.42223 (13) | 0.20911 (12) | 0.0468 (6) | |
C19 | 0.5869 (4) | 0.37666 (17) | 0.19470 (14) | 0.0664 (7) | |
H19A | 0.6013 | 0.3332 | 0.1651 | 0.100* | |
H19B | 0.4958 | 0.4106 | 0.1730 | 0.100* | |
H19C | 0.5545 | 0.3576 | 0.2369 | 0.100* | |
C20 | 0.9089 (4) | 0.36765 (17) | 0.24109 (15) | 0.0686 (8) | |
H20A | 1.0168 | 0.3968 | 0.2512 | 0.103* | |
H20B | 0.9248 | 0.3263 | 0.2096 | 0.103* | |
H20C | 0.8778 | 0.3456 | 0.2825 | 0.103* | |
C21 | 0.8091 (5) | 0.44871 (18) | 0.13963 (15) | 0.0773 (9) | |
H21A | 0.9208 | 0.4753 | 0.1464 | 0.116* | |
H21B | 0.7196 | 0.4836 | 0.1181 | 0.116* | |
H21C | 0.8167 | 0.4038 | 0.1110 | 0.116* | |
C22 | 0.7438 (4) | 0.71533 (15) | 0.23820 (16) | 0.0699 (8) | |
H22A | 0.6326 | 0.7256 | 0.2106 | 0.105* | |
H22B | 0.8365 | 0.7169 | 0.2101 | 0.105* | |
H22C | 0.7655 | 0.7544 | 0.2734 | 0.105* | |
N1 | 0.6800 (3) | 0.16290 (12) | 0.31256 (11) | 0.0562 (5) | |
H1N | 0.6416 | 0.2045 | 0.3301 | 0.067* | |
N2 | 0.7631 (3) | 0.04499 (11) | 0.30055 (11) | 0.0521 (5) | |
H2N | 0.7882 | −0.0034 | 0.3090 | 0.063* | |
C23 | 0.7004 (3) | 0.09434 (16) | 0.34190 (13) | 0.0581 (7) | |
H23 | 0.6745 | 0.0824 | 0.3853 | 0.070* | |
C24 | 0.7295 (4) | 0.15700 (16) | 0.25018 (15) | 0.0676 (8) | |
H24 | 0.7279 | 0.1969 | 0.2181 | 0.081* | |
C25 | 0.7813 (4) | 0.08324 (16) | 0.24281 (15) | 0.0623 (7) | |
H25 | 0.8224 | 0.0622 | 0.2046 | 0.075* |
U11 | U22 | U33 | U12 | U13 | U23 | |
P1 | 0.0516 (3) | 0.0315 (3) | 0.0386 (3) | 0.0089 (3) | 0.0128 (2) | −0.0005 (2) |
S1 | 0.0421 (3) | 0.0654 (4) | 0.0461 (3) | −0.0048 (3) | 0.0080 (2) | −0.0148 (3) |
O1 | 0.0521 (9) | 0.0392 (8) | 0.0405 (9) | 0.0136 (7) | 0.0129 (7) | 0.0015 (6) |
O2 | 0.0494 (9) | 0.0400 (9) | 0.0467 (9) | 0.0102 (7) | 0.0143 (7) | 0.0009 (7) |
O3 | 0.0539 (10) | 0.0391 (8) | 0.0451 (9) | 0.0034 (7) | 0.0090 (7) | 0.0027 (7) |
O4 | 0.0789 (12) | 0.0356 (8) | 0.0577 (10) | 0.0134 (8) | 0.0261 (9) | 0.0029 (8) |
C1 | 0.0448 (12) | 0.0416 (12) | 0.0308 (11) | 0.0113 (10) | 0.0058 (9) | −0.0046 (9) |
C2 | 0.0449 (12) | 0.0389 (12) | 0.0370 (11) | 0.0058 (9) | 0.0080 (9) | −0.0003 (9) |
C3 | 0.0431 (13) | 0.0440 (13) | 0.0467 (13) | 0.0044 (10) | 0.0132 (10) | −0.0052 (10) |
C4 | 0.0500 (14) | 0.0418 (13) | 0.0511 (14) | 0.0046 (10) | 0.0098 (11) | −0.0115 (10) |
C5 | 0.0500 (13) | 0.0375 (12) | 0.0481 (13) | −0.0028 (10) | 0.0104 (10) | −0.0094 (10) |
C6 | 0.0382 (11) | 0.0472 (13) | 0.0370 (12) | −0.0016 (10) | 0.0077 (9) | −0.0073 (10) |
C7 | 0.0633 (15) | 0.0414 (13) | 0.0544 (14) | 0.0046 (11) | 0.0260 (12) | 0.0014 (11) |
C8 | 0.0722 (19) | 0.0532 (16) | 0.0766 (19) | −0.0003 (13) | 0.0286 (15) | 0.0053 (14) |
C9 | 0.097 (3) | 0.068 (2) | 0.120 (3) | 0.0305 (18) | 0.051 (2) | 0.0466 (19) |
C10 | 0.121 (3) | 0.073 (2) | 0.080 (2) | −0.047 (2) | 0.044 (2) | −0.0231 (17) |
C11 | 0.0605 (17) | 0.0520 (15) | 0.096 (2) | 0.0081 (13) | 0.0245 (16) | −0.0220 (15) |
C12 | 0.0366 (12) | 0.0474 (13) | 0.0427 (13) | −0.0007 (10) | 0.0106 (9) | −0.0065 (10) |
C13 | 0.0429 (13) | 0.0397 (13) | 0.0662 (16) | −0.0009 (10) | 0.0106 (11) | −0.0116 (11) |
C14 | 0.0444 (13) | 0.0423 (13) | 0.0627 (16) | −0.0004 (10) | 0.0038 (11) | −0.0011 (11) |
C15 | 0.0489 (14) | 0.0485 (14) | 0.0491 (14) | 0.0012 (10) | 0.0060 (11) | 0.0054 (11) |
C16 | 0.0405 (12) | 0.0427 (13) | 0.0449 (13) | 0.0032 (10) | 0.0100 (10) | −0.0028 (10) |
C17 | 0.0346 (11) | 0.0385 (11) | 0.0453 (13) | 0.0041 (9) | 0.0095 (9) | −0.0006 (9) |
C18 | 0.0565 (14) | 0.0440 (13) | 0.0424 (13) | −0.0002 (11) | 0.0156 (11) | −0.0048 (10) |
C19 | 0.0734 (18) | 0.0698 (18) | 0.0586 (17) | −0.0136 (15) | 0.0178 (14) | −0.0209 (13) |
C20 | 0.0727 (19) | 0.0664 (19) | 0.0684 (18) | 0.0209 (15) | 0.0166 (15) | −0.0147 (14) |
C21 | 0.114 (3) | 0.0676 (19) | 0.0580 (17) | −0.0056 (17) | 0.0398 (17) | −0.0084 (14) |
C22 | 0.079 (2) | 0.0424 (15) | 0.086 (2) | 0.0007 (13) | 0.0037 (15) | 0.0074 (14) |
N1 | 0.0596 (13) | 0.0456 (12) | 0.0624 (14) | 0.0178 (10) | 0.0051 (11) | −0.0119 (10) |
N2 | 0.0560 (13) | 0.0370 (11) | 0.0603 (13) | 0.0115 (9) | −0.0025 (10) | −0.0022 (9) |
C23 | 0.0669 (17) | 0.0590 (16) | 0.0471 (14) | 0.0184 (13) | 0.0034 (12) | 0.0003 (13) |
C24 | 0.085 (2) | 0.0488 (15) | 0.0744 (19) | 0.0150 (14) | 0.0312 (16) | 0.0095 (13) |
C25 | 0.0752 (18) | 0.0525 (16) | 0.0628 (17) | 0.0160 (13) | 0.0217 (14) | −0.0048 (13) |
P1—O3 | 1.4687 (16) | C12—C17 | 1.394 (3) |
P1—O4 | 1.4688 (15) | C13—C14 | 1.363 (3) |
P1—O1 | 1.6077 (15) | C13—H13 | 0.9300 |
P1—O2 | 1.6112 (16) | C14—C15 | 1.392 (3) |
S1—C12 | 1.779 (2) | C14—C22 | 1.504 (3) |
S1—C6 | 1.783 (2) | C15—C16 | 1.390 (3) |
O1—C1 | 1.391 (2) | C15—H15 | 0.9300 |
O2—C17 | 1.391 (2) | C16—C17 | 1.401 (3) |
C1—C6 | 1.389 (3) | C16—C18 | 1.538 (3) |
C1—C2 | 1.407 (3) | C18—C20 | 1.531 (4) |
C2—C3 | 1.401 (3) | C18—C19 | 1.535 (4) |
C2—C7 | 1.535 (3) | C18—C21 | 1.537 (4) |
C3—C4 | 1.389 (3) | C19—H19A | 0.9600 |
C3—H3 | 0.9300 | C19—H19B | 0.9600 |
C4—C5 | 1.377 (3) | C19—H19C | 0.9600 |
C4—C11 | 1.512 (3) | C20—H20A | 0.9600 |
C5—C6 | 1.384 (3) | C20—H20B | 0.9600 |
C5—H5 | 0.9300 | C20—H20C | 0.9600 |
C7—C8 | 1.529 (4) | C21—H21A | 0.9600 |
C7—C9 | 1.543 (4) | C21—H21B | 0.9600 |
C7—C10 | 1.550 (4) | C21—H21C | 0.9600 |
C8—H8A | 0.9600 | C22—H22A | 0.9600 |
C8—H8B | 0.9600 | C22—H22B | 0.9600 |
C8—H8C | 0.9600 | C22—H22C | 0.9600 |
C9—H9A | 0.9600 | N1—C23 | 1.306 (3) |
C9—H9B | 0.9600 | N1—C24 | 1.343 (3) |
C9—H9C | 0.9600 | N1—H1N | 0.8600 |
C10—H10A | 0.9600 | N2—C23 | 1.310 (3) |
C10—H10B | 0.9600 | N2—C25 | 1.339 (3) |
C10—H10C | 0.9600 | N2—H2N | 0.8600 |
C11—H11A | 0.9600 | C23—H23 | 0.9300 |
C11—H11B | 0.9600 | C24—C25 | 1.334 (4) |
C11—H11C | 0.9600 | C24—H24 | 0.9300 |
C12—C13 | 1.391 (3) | C25—H25 | 0.9300 |
O3—P1—O4 | 120.85 (10) | C14—C13—C12 | 121.4 (2) |
O3—P1—O1 | 109.38 (9) | C14—C13—H13 | 119.3 |
O4—P1—O1 | 104.82 (9) | C12—C13—H13 | 119.3 |
O3—P1—O2 | 109.24 (9) | C13—C14—C15 | 117.5 (2) |
O4—P1—O2 | 105.53 (9) | C13—C14—C22 | 122.3 (2) |
O1—P1—O2 | 106.03 (9) | C15—C14—C22 | 120.2 (2) |
C12—S1—C6 | 105.47 (10) | C16—C15—C14 | 124.3 (2) |
C1—O1—P1 | 123.66 (13) | C16—C15—H15 | 117.8 |
C17—O2—P1 | 124.25 (13) | C14—C15—H15 | 117.8 |
C6—C1—O1 | 119.03 (19) | C15—C16—C17 | 116.0 (2) |
C6—C1—C2 | 120.93 (19) | C15—C16—C18 | 120.2 (2) |
O1—C1—C2 | 119.91 (19) | C17—C16—C18 | 123.8 (2) |
C3—C2—C1 | 116.1 (2) | O2—C17—C12 | 118.77 (19) |
C3—C2—C7 | 119.96 (19) | O2—C17—C16 | 120.11 (19) |
C1—C2—C7 | 123.92 (19) | C12—C17—C16 | 120.9 (2) |
C4—C3—C2 | 123.7 (2) | C20—C18—C19 | 109.8 (2) |
C4—C3—H3 | 118.2 | C20—C18—C21 | 107.1 (2) |
C2—C3—H3 | 118.2 | C19—C18—C21 | 107.0 (2) |
C5—C4—C3 | 118.0 (2) | C20—C18—C16 | 110.7 (2) |
C5—C4—C11 | 120.9 (2) | C19—C18—C16 | 110.68 (19) |
C3—C4—C11 | 121.1 (2) | C21—C18—C16 | 111.42 (19) |
C4—C5—C6 | 120.8 (2) | C18—C19—H19A | 109.5 |
C4—C5—H5 | 119.6 | C18—C19—H19B | 109.5 |
C6—C5—H5 | 119.6 | H19A—C19—H19B | 109.5 |
C5—C6—C1 | 120.3 (2) | C18—C19—H19C | 109.5 |
C5—C6—S1 | 118.03 (17) | H19A—C19—H19C | 109.5 |
C1—C6—S1 | 121.06 (16) | H19B—C19—H19C | 109.5 |
C8—C7—C2 | 112.64 (19) | C18—C20—H20A | 109.5 |
C8—C7—C9 | 107.0 (2) | C18—C20—H20B | 109.5 |
C2—C7—C9 | 108.9 (2) | H20A—C20—H20B | 109.5 |
C8—C7—C10 | 106.3 (2) | C18—C20—H20C | 109.5 |
C2—C7—C10 | 111.0 (2) | H20A—C20—H20C | 109.5 |
C9—C7—C10 | 110.8 (2) | H20B—C20—H20C | 109.5 |
C7—C8—H8A | 109.5 | C18—C21—H21A | 109.5 |
C7—C8—H8B | 109.5 | C18—C21—H21B | 109.5 |
H8A—C8—H8B | 109.5 | H21A—C21—H21B | 109.5 |
C7—C8—H8C | 109.5 | C18—C21—H21C | 109.5 |
H8A—C8—H8C | 109.5 | H21A—C21—H21C | 109.5 |
H8B—C8—H8C | 109.5 | H21B—C21—H21C | 109.5 |
C7—C9—H9A | 109.5 | C14—C22—H22A | 109.5 |
C7—C9—H9B | 109.5 | C14—C22—H22B | 109.5 |
H9A—C9—H9B | 109.5 | H22A—C22—H22B | 109.5 |
C7—C9—H9C | 109.5 | C14—C22—H22C | 109.5 |
H9A—C9—H9C | 109.5 | H22A—C22—H22C | 109.5 |
H9B—C9—H9C | 109.5 | H22B—C22—H22C | 109.5 |
C7—C10—H10A | 109.5 | C23—N1—C24 | 108.0 (2) |
C7—C10—H10B | 109.5 | C23—N1—H1N | 126.0 |
H10A—C10—H10B | 109.5 | C24—N1—H1N | 126.0 |
C7—C10—H10C | 109.5 | C23—N2—C25 | 108.0 (2) |
H10A—C10—H10C | 109.5 | C23—N2—H2N | 126.0 |
H10B—C10—H10C | 109.5 | C25—N2—H2N | 126.0 |
C4—C11—H11A | 109.5 | N1—C23—N2 | 109.3 (2) |
C4—C11—H11B | 109.5 | N1—C23—H23 | 125.3 |
H11A—C11—H11B | 109.5 | N2—C23—H23 | 125.3 |
C4—C11—H11C | 109.5 | C25—C24—N1 | 107.3 (2) |
H11A—C11—H11C | 109.5 | C25—C24—H24 | 126.4 |
H11B—C11—H11C | 109.5 | N1—C24—H24 | 126.4 |
C13—C12—C17 | 119.7 (2) | C24—C25—N2 | 107.4 (2) |
C13—C12—S1 | 118.64 (17) | C24—C25—H25 | 126.3 |
C17—C12—S1 | 121.16 (17) | N2—C25—H25 | 126.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O4 | 0.86 | 1.77 | 2.628 (2) | 174 |
N2—H2N···O3i | 0.86 | 1.76 | 2.603 (2) | 167 |
Symmetry code: (i) x+1/2, y−1/2, z. |
C3H5N2+·C22H28O4PS−·0.5C8H16N2O4 | F(000) = 2520 |
Mr = 590.68 | Dx = 1.248 Mg m−3 |
Monoclinic, C2/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -C2yc | Cell parameters from 7692 reflections |
a = 29.333 (2) Å | θ = 2.5–24.6° |
b = 9.9415 (7) Å | µ = 0.20 mm−1 |
c = 23.3483 (17) Å | T = 295 K |
β = 112.542 (1)° | Needle, colorless |
V = 6288.5 (8) Å3 | 0.44 × 0.30 × 0.22 mm |
Z = 8 |
Bruker SMART CCD area-detector diffractometer | 7424 independent reflections |
Radiation source: fine-focus sealed tube | 4746 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.065 |
ϕ and ω scans | θmax = 28.3°, θmin = 1.5° |
Absorption correction: empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | h = −37→37 |
Tmin = 0.796, Tmax = 0.958 | k = −13→13 |
35617 measured reflections | l = −31→31 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.048 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.135 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.95 | w = 1/[σ2(Fo2) + (0.0778P)2] where P = (Fo2 + 2Fc2)/3 |
7424 reflections | (Δ/σ)max < 0.001 |
375 parameters | Δρmax = 0.39 e Å−3 |
0 restraints | Δρmin = −0.24 e Å−3 |
C3H5N2+·C22H28O4PS−·0.5C8H16N2O4 | V = 6288.5 (8) Å3 |
Mr = 590.68 | Z = 8 |
Monoclinic, C2/c | Mo Kα radiation |
a = 29.333 (2) Å | µ = 0.20 mm−1 |
b = 9.9415 (7) Å | T = 295 K |
c = 23.3483 (17) Å | 0.44 × 0.30 × 0.22 mm |
β = 112.542 (1)° |
Bruker SMART CCD area-detector diffractometer | 7424 independent reflections |
Absorption correction: empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | 4746 reflections with I > 2σ(I) |
Tmin = 0.796, Tmax = 0.958 | Rint = 0.065 |
35617 measured reflections |
R[F2 > 2σ(F2)] = 0.048 | 0 restraints |
wR(F2) = 0.135 | H atoms treated by a mixture of independent and constrained refinement |
S = 0.95 | Δρmax = 0.39 e Å−3 |
7424 reflections | Δρmin = −0.24 e Å−3 |
375 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
P1 | 0.130053 (18) | 0.03372 (5) | 0.26349 (2) | 0.03602 (14) | |
S1 | 0.214948 (18) | 0.18642 (5) | 0.20616 (2) | 0.04206 (15) | |
O1 | 0.18893 (5) | 0.01164 (12) | 0.29554 (6) | 0.0382 (3) | |
O2 | 0.11911 (5) | 0.05899 (12) | 0.19132 (6) | 0.0404 (3) | |
O3 | 0.10864 (5) | −0.09917 (12) | 0.26609 (7) | 0.0476 (4) | |
O4 | 0.11579 (5) | 0.15417 (13) | 0.28965 (6) | 0.0443 (3) | |
C1 | 0.22317 (7) | 0.11147 (18) | 0.32462 (9) | 0.0361 (4) | |
C2 | 0.24602 (7) | 0.11358 (18) | 0.38934 (9) | 0.0391 (4) | |
C3 | 0.28189 (7) | 0.2126 (2) | 0.41460 (9) | 0.0436 (5) | |
H3 | 0.2975 | 0.2169 | 0.4576 | 0.052* | |
C4 | 0.29581 (7) | 0.30490 (19) | 0.37990 (9) | 0.0433 (5) | |
C5 | 0.27336 (7) | 0.29728 (19) | 0.31618 (9) | 0.0411 (5) | |
H5 | 0.2826 | 0.3566 | 0.2917 | 0.049* | |
C6 | 0.23722 (6) | 0.20185 (18) | 0.28843 (8) | 0.0352 (4) | |
C7 | 0.23487 (9) | 0.0121 (2) | 0.43197 (10) | 0.0529 (6) | |
C8 | 0.26739 (10) | 0.0334 (2) | 0.50001 (10) | 0.0685 (7) | |
H8A | 0.3013 | 0.0201 | 0.5060 | 0.103* | |
H8B | 0.2584 | −0.0298 | 0.5249 | 0.103* | |
H8C | 0.2630 | 0.1233 | 0.5120 | 0.103* | |
C9 | 0.24525 (16) | −0.1304 (2) | 0.41559 (13) | 0.1141 (14) | |
H9A | 0.2236 | −0.1508 | 0.3738 | 0.171* | |
H9B | 0.2398 | −0.1933 | 0.4435 | 0.171* | |
H9C | 0.2789 | −0.1364 | 0.4192 | 0.171* | |
C25 | 0.17028 (13) | 0.5969 (3) | 0.31586 (18) | 0.1003 (12) | |
H25 | 0.1963 | 0.6573 | 0.3324 | 0.120* | |
C10 | 0.18173 (11) | 0.0268 (4) | 0.42690 (13) | 0.1065 (13) | |
H10A | 0.1751 | 0.1195 | 0.4323 | 0.160* | |
H10B | 0.1769 | −0.0265 | 0.4584 | 0.160* | |
H10C | 0.1596 | −0.0033 | 0.3868 | 0.160* | |
C11 | 0.33514 (8) | 0.4084 (2) | 0.41126 (10) | 0.0596 (6) | |
H11A | 0.3540 | 0.4249 | 0.3863 | 0.089* | |
H11B | 0.3566 | 0.3755 | 0.4512 | 0.089* | |
H11C | 0.3199 | 0.4905 | 0.4163 | 0.089* | |
C12 | 0.15581 (7) | 0.26397 (19) | 0.17661 (8) | 0.0378 (4) | |
C13 | 0.15136 (8) | 0.3968 (2) | 0.15664 (9) | 0.0438 (5) | |
H13 | 0.1796 | 0.4477 | 0.1635 | 0.053* | |
C14 | 0.10550 (8) | 0.4536 (2) | 0.12676 (10) | 0.0490 (5) | |
C15 | 0.06428 (8) | 0.3725 (2) | 0.11450 (10) | 0.0513 (5) | |
H15 | 0.0334 | 0.4099 | 0.0926 | 0.062* | |
C16 | 0.06619 (7) | 0.2389 (2) | 0.13281 (9) | 0.0441 (5) | |
C17 | 0.11339 (7) | 0.18841 (18) | 0.16726 (8) | 0.0376 (4) | |
C18 | 0.01847 (8) | 0.1550 (3) | 0.11564 (11) | 0.0601 (6) | |
C19 | 0.00099 (11) | 0.1597 (4) | 0.16928 (15) | 0.1106 (13) | |
H19A | 0.0256 | 0.1204 | 0.2055 | 0.166* | |
H19B | −0.0293 | 0.1102 | 0.1583 | 0.166* | |
H19C | −0.0044 | 0.2516 | 0.1778 | 0.166* | |
C20 | 0.02562 (11) | 0.0089 (3) | 0.09967 (16) | 0.0990 (11) | |
H20A | 0.0425 | 0.0075 | 0.0716 | 0.148* | |
H20B | −0.0060 | −0.0337 | 0.0805 | 0.148* | |
H20C | 0.0449 | −0.0386 | 0.1369 | 0.148* | |
C21 | −0.02257 (10) | 0.2129 (3) | 0.05740 (14) | 0.0916 (10) | |
H21A | −0.0312 | 0.3015 | 0.0663 | 0.137* | |
H21B | −0.0511 | 0.1558 | 0.0455 | 0.137* | |
H21C | −0.0110 | 0.2176 | 0.0241 | 0.137* | |
C22 | 0.09953 (10) | 0.5998 (2) | 0.10678 (13) | 0.0717 (7) | |
H22A | 0.1237 | 0.6534 | 0.1380 | 0.107* | |
H22B | 0.0670 | 0.6301 | 0.1013 | 0.107* | |
H22C | 0.1041 | 0.6086 | 0.0684 | 0.107* | |
N1 | 0.12714 (7) | 0.41688 (17) | 0.29291 (8) | 0.0487 (4) | |
H1N | 0.1187 | 0.3337 | 0.2914 | 0.058* | |
N2 | 0.12334 (10) | 0.62712 (19) | 0.27852 (12) | 0.0779 (7) | |
H2N | 0.1121 | 0.7063 | 0.2660 | 0.093* | |
C23 | 0.09822 (9) | 0.5163 (2) | 0.26484 (11) | 0.0571 (6) | |
H23 | 0.0650 | 0.5088 | 0.2392 | 0.068* | |
C24 | 0.17225 (10) | 0.4664 (3) | 0.32440 (13) | 0.0747 (8) | |
H24 | 0.2000 | 0.4171 | 0.3481 | 0.090* | |
O5 | −0.01256 (6) | 0.66754 (19) | 0.32395 (8) | 0.0721 (5) | |
O6 | 0.06252 (5) | 0.76214 (16) | 0.37407 (7) | 0.0568 (4) | |
N3 | 0.02036 (7) | 0.8174 (2) | 0.27774 (8) | 0.0536 (5) | |
H3N | 0.0463 (8) | 0.860 (2) | 0.2797 (10) | 0.050 (6)* | |
C26 | 0.02040 (7) | 0.7407 (2) | 0.32473 (10) | 0.0481 (5) | |
C27 | 0.06903 (9) | 0.6887 (3) | 0.43031 (11) | 0.0682 (7) | |
H27 | 0.0372 | 0.6799 | 0.4345 | 0.082* | |
C28 | 0.10329 (11) | 0.7710 (4) | 0.48272 (13) | 0.0967 (10) | |
H28A | 0.1347 | 0.7780 | 0.4790 | 0.145* | |
H28B | 0.1075 | 0.7285 | 0.5214 | 0.145* | |
H28C | 0.0897 | 0.8592 | 0.4814 | 0.145* | |
C29 | 0.08856 (16) | 0.5530 (4) | 0.42555 (18) | 0.1249 (14) | |
H29A | 0.0665 | 0.5089 | 0.3888 | 0.187* | |
H29B | 0.0913 | 0.5007 | 0.4613 | 0.187* | |
H29C | 0.1205 | 0.5616 | 0.4235 | 0.187* |
U11 | U22 | U33 | U12 | U13 | U23 | |
P1 | 0.0378 (3) | 0.0256 (2) | 0.0463 (3) | −0.0014 (2) | 0.0180 (2) | 0.0017 (2) |
S1 | 0.0392 (3) | 0.0503 (3) | 0.0397 (3) | 0.0015 (2) | 0.0185 (2) | 0.0019 (2) |
O1 | 0.0383 (7) | 0.0311 (7) | 0.0446 (8) | −0.0012 (5) | 0.0151 (6) | 0.0004 (6) |
O2 | 0.0435 (8) | 0.0329 (7) | 0.0435 (8) | −0.0016 (6) | 0.0152 (6) | −0.0007 (6) |
O3 | 0.0452 (8) | 0.0286 (7) | 0.0668 (10) | −0.0049 (6) | 0.0191 (7) | 0.0049 (6) |
O4 | 0.0539 (8) | 0.0322 (7) | 0.0535 (8) | 0.0028 (6) | 0.0280 (7) | 0.0014 (6) |
C1 | 0.0344 (10) | 0.0321 (10) | 0.0428 (11) | 0.0007 (8) | 0.0161 (8) | −0.0002 (8) |
C2 | 0.0431 (11) | 0.0342 (10) | 0.0421 (11) | 0.0015 (8) | 0.0188 (9) | 0.0033 (8) |
C3 | 0.0438 (11) | 0.0448 (11) | 0.0390 (11) | −0.0008 (9) | 0.0126 (9) | −0.0005 (9) |
C4 | 0.0395 (11) | 0.0393 (11) | 0.0490 (12) | −0.0021 (8) | 0.0146 (9) | 0.0004 (9) |
C5 | 0.0389 (11) | 0.0395 (11) | 0.0458 (11) | −0.0015 (8) | 0.0173 (9) | 0.0068 (9) |
C6 | 0.0330 (9) | 0.0362 (10) | 0.0366 (10) | 0.0039 (8) | 0.0138 (8) | 0.0036 (8) |
C7 | 0.0687 (15) | 0.0510 (13) | 0.0395 (12) | −0.0117 (11) | 0.0213 (11) | 0.0034 (10) |
C8 | 0.0873 (19) | 0.0688 (16) | 0.0442 (13) | −0.0052 (14) | 0.0193 (13) | 0.0136 (12) |
C9 | 0.239 (4) | 0.0401 (14) | 0.0689 (19) | −0.013 (2) | 0.066 (2) | 0.0069 (13) |
C25 | 0.087 (2) | 0.066 (2) | 0.169 (4) | −0.0321 (17) | 0.073 (2) | −0.055 (2) |
C10 | 0.074 (2) | 0.190 (4) | 0.0601 (18) | −0.034 (2) | 0.0309 (15) | 0.031 (2) |
C11 | 0.0580 (14) | 0.0578 (14) | 0.0561 (14) | −0.0191 (11) | 0.0144 (11) | −0.0032 (11) |
C12 | 0.0407 (10) | 0.0416 (11) | 0.0317 (9) | 0.0005 (8) | 0.0146 (8) | 0.0007 (8) |
C13 | 0.0479 (12) | 0.0461 (12) | 0.0393 (11) | −0.0045 (9) | 0.0190 (9) | 0.0043 (9) |
C14 | 0.0560 (13) | 0.0469 (12) | 0.0481 (12) | 0.0040 (10) | 0.0244 (10) | 0.0086 (10) |
C15 | 0.0453 (12) | 0.0564 (13) | 0.0508 (13) | 0.0102 (10) | 0.0168 (10) | 0.0143 (10) |
C16 | 0.0423 (11) | 0.0506 (12) | 0.0388 (11) | −0.0015 (9) | 0.0148 (9) | 0.0033 (9) |
C17 | 0.0437 (11) | 0.0341 (10) | 0.0356 (10) | 0.0009 (8) | 0.0159 (8) | −0.0007 (8) |
C18 | 0.0388 (12) | 0.0731 (16) | 0.0574 (14) | −0.0050 (11) | 0.0061 (11) | 0.0089 (12) |
C19 | 0.0563 (17) | 0.190 (4) | 0.091 (2) | −0.031 (2) | 0.0345 (16) | 0.010 (2) |
C20 | 0.0682 (19) | 0.0683 (19) | 0.124 (3) | −0.0246 (15) | −0.0042 (18) | −0.0039 (18) |
C21 | 0.0580 (17) | 0.093 (2) | 0.088 (2) | −0.0046 (15) | −0.0116 (15) | 0.0133 (17) |
C22 | 0.0751 (18) | 0.0569 (15) | 0.0854 (19) | 0.0074 (13) | 0.0335 (15) | 0.0285 (13) |
N1 | 0.0606 (12) | 0.0303 (9) | 0.0554 (11) | 0.0006 (8) | 0.0224 (9) | −0.0031 (8) |
N2 | 0.120 (2) | 0.0319 (11) | 0.1134 (19) | 0.0190 (12) | 0.0800 (17) | 0.0128 (11) |
C23 | 0.0541 (14) | 0.0603 (15) | 0.0556 (14) | 0.0161 (12) | 0.0197 (11) | 0.0073 (11) |
C24 | 0.0507 (15) | 0.0714 (18) | 0.0878 (19) | 0.0120 (13) | 0.0107 (14) | −0.0272 (15) |
O5 | 0.0516 (10) | 0.0908 (13) | 0.0681 (11) | −0.0296 (9) | 0.0167 (8) | 0.0014 (9) |
O6 | 0.0419 (8) | 0.0712 (11) | 0.0484 (9) | −0.0128 (7) | 0.0073 (7) | 0.0102 (8) |
N3 | 0.0340 (10) | 0.0725 (13) | 0.0479 (11) | −0.0076 (9) | 0.0086 (8) | 0.0035 (9) |
C26 | 0.0355 (11) | 0.0572 (13) | 0.0504 (13) | −0.0049 (10) | 0.0150 (10) | −0.0040 (10) |
C27 | 0.0576 (15) | 0.0847 (19) | 0.0563 (15) | −0.0131 (13) | 0.0154 (12) | 0.0179 (13) |
C28 | 0.088 (2) | 0.121 (3) | 0.0585 (18) | −0.026 (2) | 0.0042 (15) | 0.0140 (17) |
C29 | 0.148 (4) | 0.095 (3) | 0.109 (3) | 0.008 (3) | 0.024 (3) | 0.039 (2) |
P1—O3 | 1.4741 (13) | C15—C16 | 1.390 (3) |
P1—O4 | 1.4759 (13) | C15—H15 | 0.9300 |
P1—O2 | 1.6095 (14) | C16—C17 | 1.401 (3) |
P1—O1 | 1.6125 (14) | C16—C18 | 1.544 (3) |
S1—C12 | 1.7782 (19) | C18—C19 | 1.525 (4) |
S1—C6 | 1.7827 (19) | C18—C20 | 1.534 (4) |
O1—C1 | 1.390 (2) | C18—C21 | 1.541 (3) |
O2—C17 | 1.388 (2) | C19—H19A | 0.9600 |
C1—C2 | 1.399 (3) | C19—H19B | 0.9600 |
C1—C6 | 1.399 (3) | C19—H19C | 0.9600 |
C2—C3 | 1.396 (3) | C20—H20A | 0.9600 |
C2—C7 | 1.538 (3) | C20—H20B | 0.9600 |
C3—C4 | 1.385 (3) | C20—H20C | 0.9600 |
C3—H3 | 0.9300 | C21—H21A | 0.9600 |
C4—C5 | 1.379 (3) | C21—H21B | 0.9600 |
C4—C11 | 1.509 (3) | C21—H21C | 0.9600 |
C5—C6 | 1.385 (2) | C22—H22A | 0.9600 |
C5—H5 | 0.9300 | C22—H22B | 0.9600 |
C7—C8 | 1.522 (3) | C22—H22C | 0.9600 |
C7—C10 | 1.524 (4) | N1—C23 | 1.303 (3) |
C7—C9 | 1.528 (3) | N1—C24 | 1.337 (3) |
C8—H8A | 0.9600 | N1—H1N | 0.8600 |
C8—H8B | 0.9600 | N2—C23 | 1.296 (3) |
C8—H8C | 0.9600 | N2—H2N | 0.8600 |
C9—H9A | 0.9600 | C23—H23 | 0.9300 |
C9—H9B | 0.9600 | C24—H24 | 0.9300 |
C9—H9C | 0.9600 | O5—C26 | 1.205 (2) |
C25—C24 | 1.311 (4) | O6—C26 | 1.344 (2) |
C25—N2 | 1.351 (4) | O6—C27 | 1.449 (3) |
C25—H25 | 0.9300 | N3—C26 | 1.335 (3) |
C10—H10A | 0.9600 | N3—N3i | 1.385 (3) |
C10—H10B | 0.9600 | N3—H3N | 0.86 (2) |
C10—H10C | 0.9600 | C27—C29 | 1.487 (4) |
C11—H11A | 0.9600 | C27—C28 | 1.495 (4) |
C11—H11B | 0.9600 | C27—H27 | 0.9800 |
C11—H11C | 0.9600 | C28—H28A | 0.9600 |
C12—C13 | 1.390 (3) | C28—H28B | 0.9600 |
C12—C17 | 1.397 (3) | C28—H28C | 0.9600 |
C13—C14 | 1.377 (3) | C29—H29A | 0.9600 |
C13—H13 | 0.9300 | C29—H29B | 0.9600 |
C14—C15 | 1.389 (3) | C29—H29C | 0.9600 |
C14—C22 | 1.516 (3) | ||
O3—P1—O4 | 121.15 (8) | C15—C16—C18 | 120.71 (19) |
O3—P1—O2 | 105.42 (8) | C17—C16—C18 | 123.62 (19) |
O4—P1—O2 | 109.41 (7) | O2—C17—C12 | 118.22 (16) |
O3—P1—O1 | 104.86 (7) | O2—C17—C16 | 120.26 (17) |
O4—P1—O1 | 109.97 (8) | C12—C17—C16 | 121.49 (17) |
O2—P1—O1 | 104.79 (7) | C19—C18—C20 | 110.4 (3) |
C12—S1—C6 | 106.31 (8) | C19—C18—C21 | 108.5 (2) |
C1—O1—P1 | 125.05 (11) | C20—C18—C21 | 105.8 (2) |
C17—O2—P1 | 120.87 (11) | C19—C18—C16 | 109.1 (2) |
O1—C1—C2 | 119.72 (16) | C20—C18—C16 | 112.3 (2) |
O1—C1—C6 | 119.23 (16) | C21—C18—C16 | 110.5 (2) |
C2—C1—C6 | 120.84 (17) | C18—C19—H19A | 109.5 |
C3—C2—C1 | 116.01 (17) | C18—C19—H19B | 109.5 |
C3—C2—C7 | 120.13 (18) | H19A—C19—H19B | 109.5 |
C1—C2—C7 | 123.83 (17) | C18—C19—H19C | 109.5 |
C4—C3—C2 | 124.29 (19) | H19A—C19—H19C | 109.5 |
C4—C3—H3 | 117.9 | H19B—C19—H19C | 109.5 |
C2—C3—H3 | 117.9 | C18—C20—H20A | 109.5 |
C5—C4—C3 | 117.96 (18) | C18—C20—H20B | 109.5 |
C5—C4—C11 | 121.40 (18) | H20A—C20—H20B | 109.5 |
C3—C4—C11 | 120.63 (19) | C18—C20—H20C | 109.5 |
C4—C5—C6 | 120.38 (18) | H20A—C20—H20C | 109.5 |
C4—C5—H5 | 119.8 | H20B—C20—H20C | 109.5 |
C6—C5—H5 | 119.8 | C18—C21—H21A | 109.5 |
C5—C6—C1 | 120.49 (17) | C18—C21—H21B | 109.5 |
C5—C6—S1 | 117.49 (14) | H21A—C21—H21B | 109.5 |
C1—C6—S1 | 121.62 (14) | C18—C21—H21C | 109.5 |
C8—C7—C10 | 106.3 (2) | H21A—C21—H21C | 109.5 |
C8—C7—C9 | 106.6 (2) | H21B—C21—H21C | 109.5 |
C10—C7—C9 | 111.4 (3) | C14—C22—H22A | 109.5 |
C8—C7—C2 | 112.37 (18) | C14—C22—H22B | 109.5 |
C10—C7—C2 | 110.6 (2) | H22A—C22—H22B | 109.5 |
C9—C7—C2 | 109.49 (19) | C14—C22—H22C | 109.5 |
C7—C8—H8A | 109.5 | H22A—C22—H22C | 109.5 |
C7—C8—H8B | 109.5 | H22B—C22—H22C | 109.5 |
H8A—C8—H8B | 109.5 | C23—N1—C24 | 108.3 (2) |
C7—C8—H8C | 109.5 | C23—N1—H1N | 125.9 |
H8A—C8—H8C | 109.5 | C24—N1—H1N | 125.9 |
H8B—C8—H8C | 109.5 | C23—N2—C25 | 108.2 (2) |
C7—C9—H9A | 109.5 | C23—N2—H2N | 125.9 |
C7—C9—H9B | 109.5 | C25—N2—H2N | 125.9 |
H9A—C9—H9B | 109.5 | N2—C23—N1 | 108.8 (2) |
C7—C9—H9C | 109.5 | N2—C23—H23 | 125.6 |
H9A—C9—H9C | 109.5 | N1—C23—H23 | 125.6 |
H9B—C9—H9C | 109.5 | C25—C24—N1 | 107.7 (3) |
C24—C25—N2 | 107.0 (2) | C25—C24—H24 | 126.1 |
C24—C25—H25 | 126.5 | N1—C24—H24 | 126.1 |
N2—C25—H25 | 126.5 | C26—O6—C27 | 117.08 (17) |
C7—C10—H10A | 109.5 | C26—N3—N3i | 119.81 (19) |
C7—C10—H10B | 109.5 | C26—N3—H3N | 121.2 (14) |
H10A—C10—H10B | 109.5 | N3i—N3—H3N | 118.6 (14) |
C7—C10—H10C | 109.5 | O5—C26—N3 | 125.8 (2) |
H10A—C10—H10C | 109.5 | O5—C26—O6 | 125.2 (2) |
H10B—C10—H10C | 109.5 | N3—C26—O6 | 108.96 (18) |
C4—C11—H11A | 109.5 | O6—C27—C29 | 108.1 (2) |
C4—C11—H11B | 109.5 | O6—C27—C28 | 106.3 (2) |
H11A—C11—H11B | 109.5 | C29—C27—C28 | 113.6 (3) |
C4—C11—H11C | 109.5 | O6—C27—H27 | 109.6 |
H11A—C11—H11C | 109.5 | C29—C27—H27 | 109.6 |
H11B—C11—H11C | 109.5 | C28—C27—H27 | 109.6 |
C13—C12—C17 | 119.67 (17) | C27—C28—H28A | 109.5 |
C13—C12—S1 | 119.61 (15) | C27—C28—H28B | 109.5 |
C17—C12—S1 | 120.36 (14) | H28A—C28—H28B | 109.5 |
C14—C13—C12 | 120.51 (19) | C27—C28—H28C | 109.5 |
C14—C13—H13 | 119.7 | H28A—C28—H28C | 109.5 |
C12—C13—H13 | 119.7 | H28B—C28—H28C | 109.5 |
C13—C14—C15 | 118.03 (19) | C27—C29—H29A | 109.5 |
C13—C14—C22 | 121.6 (2) | C27—C29—H29B | 109.5 |
C15—C14—C22 | 120.3 (2) | H29A—C29—H29B | 109.5 |
C14—C15—C16 | 124.24 (19) | C27—C29—H29C | 109.5 |
C14—C15—H15 | 117.9 | H29A—C29—H29C | 109.5 |
C16—C15—H15 | 117.9 | H29B—C29—H29C | 109.5 |
C15—C16—C17 | 115.67 (18) |
Symmetry code: (i) −x, y, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O4 | 0.86 | 1.79 | 2.630 (2) | 166 |
N2—H2N···O3ii | 0.86 | 1.94 | 2.753 (2) | 158 |
N3—H3N···O3ii | 0.86 (2) | 2.01 (2) | 2.830 (2) | 159 (2) |
C23—H23···O5i | 0.93 | 2.30 | 2.980 (3) | 130 |
Symmetry codes: (i) −x, y, −z+1/2; (ii) x, y+1, z. |
Experimental details
(I) | (II) | |
Crystal data | ||
Chemical formula | C3H5N2+·C22H28O4PS− | C3H5N2+·C22H28O4PS−·0.5C8H16N2O4 |
Mr | 488.56 | 590.68 |
Crystal system, space group | Monoclinic, Cc | Monoclinic, C2/c |
Temperature (K) | 295 | 295 |
a, b, c (Å) | 7.6466 (6), 17.0714 (12), 19.7596 (14) | 29.333 (2), 9.9415 (7), 23.3483 (17) |
β (°) | 98.060 (1) | 112.542 (1) |
V (Å3) | 2553.9 (3) | 6288.5 (8) |
Z | 4 | 8 |
Radiation type | Mo Kα | Mo Kα |
µ (mm−1) | 0.22 | 0.20 |
Crystal size (mm) | 0.44 × 0.30 × 0.22 | 0.44 × 0.30 × 0.22 |
Data collection | ||
Diffractometer | Bruker SMART CCD area-detector diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Empirical (using intensity measurements) (SADABS; Sheldrick, 1996) | Empirical (using intensity measurements) (SADABS; Sheldrick, 1996) |
Tmin, Tmax | 0.762, 0.953 | 0.796, 0.958 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 14692, 5940, 4683 | 35617, 7424, 4746 |
Rint | 0.035 | 0.065 |
(sin θ/λ)max (Å−1) | 0.667 | 0.666 |
Refinement | ||
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.087, 0.93 | 0.048, 0.135, 0.95 |
No. of reflections | 5940 | 7424 |
No. of parameters | 306 | 375 |
No. of restraints | 2 | 0 |
H-atom treatment | H-atom parameters constrained | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.29, −0.22 | 0.39, −0.24 |
Absolute structure | Flack (1983), 2760 Friedel pairs | ? |
Absolute structure parameter | 0.00 (5) | ? |
Computer programs: SMART (Bruker, 2000), SMART, SAINT (Bruker, 2000), SHELXS97 (Sheldrick, 1997), SHELXL97 (Sheldrick, 1997), SHELXTL-NT (Sheldrick, 1999), SHELXTL-NT.
P1—O3 | 1.4687 (16) | P1—O1 | 1.6077 (15) |
P1—O4 | 1.4688 (15) | P1—O2 | 1.6112 (16) |
O3—P1—O4 | 120.85 (10) | O3—P1—O2 | 109.24 (9) |
O3—P1—O1 | 109.38 (9) | O4—P1—O2 | 105.53 (9) |
O4—P1—O1 | 104.82 (9) | O1—P1—O2 | 106.03 (9) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O4 | 0.86 | 1.77 | 2.628 (2) | 174 |
N2—H2N···O3i | 0.86 | 1.76 | 2.603 (2) | 167 |
Symmetry code: (i) x+1/2, y−1/2, z. |
P1—O3 | 1.4741 (13) | P1—O2 | 1.6095 (14) |
P1—O4 | 1.4759 (13) | P1—O1 | 1.6125 (14) |
O3—P1—O4 | 121.15 (8) | O3—P1—O1 | 104.86 (7) |
O3—P1—O2 | 105.42 (8) | O4—P1—O1 | 109.97 (8) |
O4—P1—O2 | 109.41 (7) | O2—P1—O1 | 104.79 (7) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1N···O4 | 0.86 | 1.79 | 2.630 (2) | 166 |
N2—H2N···O3i | 0.86 | 1.94 | 2.753 (2) | 158 |
N3—H3N···O3i | 0.86 (2) | 2.01 (2) | 2.830 (2) | 159 (2) |
C23—H23···O5ii | 0.93 | 2.30 | 2.980 (3) | 130 |
Symmetry codes: (i) x, y+1, z; (ii) −x, y, −z+1/2. |
The imidazolium moiety of the hystidine residue plays an important role in the hydrolysis and cyclization of RNA-related biomolecules (Perreault & Anslyn, 1997). In previous reports of the imidazolium salts of diorganophosphates (Holmes et al., 1992; Clark et al., 1984; Blessing & McGandy, 1972), there were no additional guest molecules except in the salt reported by Kumara Swamy et al. (2001). In the latter salt, a hydrogen-bonded methanol molecule exhibiting C—H···O interactions with the imidazolyl CH located in between the two N atoms was included as a guest. We report here the X-ray structures of two imidazolyl compounds, imidazolium 6,6'-di-tert-butyl-4,4'-dimethyl-2,2'-thiodiphenylphosphate, [{S(6 - tBu-4-Me—C6H2O)2}P(O)(O)][C3N2H5], (I), and imidazolium 6,6'-di-tert-butyl-4,4'-dimethyl-2,2'-thiodiphenylphosphate diisopropyl hydrazodicarboxylate hemisolvate, [{S(6 - tBu-4-Me—C6H2O)2}P(O)(O)] [C3N2H5][(CH3)2CHO(O)CN(H)—N(H)(C(O)O(CH(CH3)2)], (II), the latter containing the carboxylate-substituted hydrazine as a hydrogen-bonded guest. Compounds (I) and (II) were obtained in the reaction of [{S(6 - tBu-4-Me—C6H2O)2}PCl[N(C(O)O(CH(CH3)2)N—C(OCH(CH3)2O–] with imidazole in the presence of adventitious moisture. Compound (I) was also obtained by the direct route by treating the in situ prepared phosphate with imidazole.
The structures of (I) and (II) are shown in Figs. 1 and 2, respectively. The P—O bond distances in both compounds are in the expected range (Kumara Swamy et al., 2001, Kumaraswamy & Kumara Swamy, 2002). The eight-membered phosphocin ring has a boat–chair conformation. This situation is similar to that in the salts and methanol/ethanol solvates of [{CH2(6 - tBu-4-Me—C6H2O)2}P(O)(OH)] (Kumara Swamy et al., 2001), but unlike the tub conformation observed by Holmes et al. (1992) for the phosphate salt [{S(6- tBu-4-Me—C6H2O)2}P(O)(O)][{HOC6H2-2,4-(CH3)2-6- CH2}2N(CH3)H], (III) (Chandrasekaran et al., 1999). Perhaps as a consequence, the P···S distance of 3.58 Å in (I) and (II) is close to the sum of van der Waals radii (3.65 Å), with essentially no sulfur-to-phosphorus interaction. In (III), by contrast, the P···S distance was 3.281 (2) Å. This feature shows that the sulfur donor action in these phosphate salts is case sensitive and could depend on the nature of hydrogen-bonding interactions involving the cation.
In (I), hydrogen bonding (Fig. 1b) leads to the formation of a chain utilizing the H atoms on the two imidazolyl N atoms and the two phosphate O atoms. This type of chain appears to be common for the imidazolyl salts of diorganophosphates (Holmes et al., 1992, Clark et al., 1984, Blessing & McGandy, 1972, Kumara Swamy et al., 2001). The same type of chain is also present in (II), but in addition, one of the phosphoryl O atoms is involved in `bifurcated' hydrogen bonding, with additional interaction from the N-bound H atoms of the substituted hydrazine residue. These interactions lead to a `ladder' type of structure, as shown in Fig. 2(b). The hydrogen-bond angles involving the phosphoryl O atom in the bifurcated hydrogen bonds in (II) are less linear than that at the corresponding O atom (O3) in (I), as expected. Accordingly, the O···N(imidazolyl) distance in (II) is also lower than that in (I). We made an attempt to incorporate dimethyl maleate (MeO2CCH═CHCO2Me) in place of the substituted hydrazine, but no insertion took place.
Among the imidazolium salts of diorganophosphates, the N(—H)···O distances in (I) are the shortest; the N2···O3 distance of 2.603 (2) Å is at the lower end for such hydrogen bonds (Kumara Swamy et al., 2001) and hence comes under the category of very stong N—H···O hydrogen bonds. Since such strong hydrogen bonds were also observed by us in the salts of the analogous organophosphate, [{CH2(6 - tBu-4-Me—C6H2O)2}P(O)(OH)] (Kumara Swamy et al., 2001), we think that this feature is the result of the 1,3,2-dioxaphosphocin ring present in these compounds.
Although there is no significant interaction of the NCHN H atom with acceptor sites in I, there is one such interaction in (II), involving the carbonyl O atom of the substituted hydrazine and the NCHN H atom in (II). The C···O distance is short [2.980 (3) Å] and is comparable to that known for strong C—H···O hydrogen bonds (Kumara Swamy et al., 2001; Kariuki et al., 1997); the angle at the H atom, however, is quite far from linearity and the H···O distance is 2.30 Å. This `non-innocent' behaviour of the imidazolyl NCHN H atom has been reported previously (Steiner, 1997; Kumara Swamy et al., 2001). Such a feature may have some implications as regards the hydrolysis of RNA where the hystidine residue comes close to the active phosphorus site, perhaps with the NCHN H atom interacting with the ribosolyl O atom as pointed out previously by us (Kumara Swamy et al., 2001). This could `lock' the imidazolyl residue until the hydrolysis is complete. Substantiation of this hypothesis would require more structural studies, preferably containing hystidine itself.