Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536811021921/su2282sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536811021921/su2282Isup2.hkl |
CCDC reference: 834256
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.004 Å
- R factor = 0.039
- wR factor = 0.111
- Data-to-parameter ratio = 15.4
checkCIF/PLATON results
No syntax errors found
Alert level B PLAT934_ALERT_3_B Number of (Iobs-Icalc)/SigmaW .gt. 10 Outliers . 1
Alert level C PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.77 PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 4 PLAT912_ALERT_4_C Missing # of FCF Reflections Above STh/L= 0.600 8
Alert level G PLAT004_ALERT_5_G Info: Polymeric Structure Found with Dimension . 1
0 ALERT level A = Most likely a serious problem - resolve or explain 1 ALERT level B = A potentially serious problem, consider carefully 4 ALERT level C = Check. Ensure it is not caused by an omission or oversight 1 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check
The title compound was prepared by the reaction of MnSO4.H2O (0.85 g, 5 mmol) in H2O (100 ml) and isonicotinamide (1.22 g, 10 mmol) in H2O (50 ml) with sodium 4-fluorobenzoate (1.62 g, 10 mmol) in H2O (50 ml) at room temperature. The mixture was filtered and set aside to crystallize at ambient temperature for two weeks, giving blue single crystals.
Atoms H31 and H32 (for H2O) were located in a difference Fourier map and were freely refined. The C-bound H-atoms were positioned geometrically with C—H = 0.95 Å for aromatic H-atoms, and constrained to ride on their parent atoms, with Uiso(H) = 1.2Ueq(C).
Data collection: APEX2 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997); software used to prepare material for publication: WinGX publication routines (Farrugia, 1999) and PLATON (Spek, 2009).
[Mn(C7H4FO2)2(H2O)2] | F(000) = 374 |
Mr = 369.18 | Dx = 1.752 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 9752 reflections |
a = 14.5065 (6) Å | θ = 2.8–28.5° |
b = 6.6107 (3) Å | µ = 1.00 mm−1 |
c = 7.3708 (3) Å | T = 100 K |
β = 98.179 (2)° | Block, blue |
V = 699.66 (5) Å3 | 0.34 × 0.27 × 0.24 mm |
Z = 2 |
Bruker Kappa APEXII CCD area-detector diffractometer | 1758 independent reflections |
Radiation source: fine-focus sealed tube | 1720 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.029 |
ϕ and ω scans | θmax = 28.5°, θmin = 2.8° |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | h = −19→19 |
Tmin = 0.728, Tmax = 0.786 | k = −8→7 |
11656 measured reflections | l = −9→9 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.039 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.28 | w = 1/[σ2(Fo2) + (0.031P)2 + 1.8232P] where P = (Fo2 + 2Fc2)/3 |
1758 reflections | (Δ/σ)max < 0.001 |
114 parameters | Δρmax = 1.24 e Å−3 |
0 restraints | Δρmin = −0.45 e Å−3 |
[Mn(C7H4FO2)2(H2O)2] | V = 699.66 (5) Å3 |
Mr = 369.18 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 14.5065 (6) Å | µ = 1.00 mm−1 |
b = 6.6107 (3) Å | T = 100 K |
c = 7.3708 (3) Å | 0.34 × 0.27 × 0.24 mm |
β = 98.179 (2)° |
Bruker Kappa APEXII CCD area-detector diffractometer | 1758 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 2005) | 1720 reflections with I > 2σ(I) |
Tmin = 0.728, Tmax = 0.786 | Rint = 0.029 |
11656 measured reflections |
R[F2 > 2σ(F2)] = 0.039 | 0 restraints |
wR(F2) = 0.111 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.28 | Δρmax = 1.24 e Å−3 |
1758 reflections | Δρmin = −0.45 e Å−3 |
114 parameters |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Mn1 | 0.5000 | 1.0000 | 0.5000 | 0.00934 (15) | |
O1 | 0.39762 (12) | 1.0833 (3) | 0.2723 (2) | 0.0133 (4) | |
O2 | 0.58287 (12) | 0.9092 (3) | 0.2904 (2) | 0.0133 (4) | |
O3 | 0.57162 (13) | 1.2939 (3) | 0.5150 (3) | 0.0146 (4) | |
H31 | 0.575 (3) | 1.370 (6) | 0.604 (6) | 0.027 (10)* | |
H32 | 0.566 (3) | 1.361 (6) | 0.425 (6) | 0.031 (10)* | |
F1 | 0.99509 (11) | 0.7768 (3) | 0.6699 (2) | 0.0279 (4) | |
C1 | 0.63126 (16) | 0.7488 (4) | 0.2983 (3) | 0.0099 (4) | |
C2 | 0.72835 (17) | 0.7562 (4) | 0.3993 (3) | 0.0123 (5) | |
C3 | 0.76860 (18) | 0.9415 (4) | 0.4534 (4) | 0.0169 (5) | |
H3 | 0.7340 | 1.0629 | 0.4285 | 0.020* | |
C4 | 0.85953 (19) | 0.9492 (4) | 0.5439 (4) | 0.0207 (5) | |
H4 | 0.8885 | 1.0748 | 0.5792 | 0.025* | |
C5 | 0.90623 (17) | 0.7696 (5) | 0.5807 (4) | 0.0184 (5) | |
C6 | 0.86858 (19) | 0.5840 (4) | 0.5321 (4) | 0.0200 (5) | |
H6 | 0.9030 | 0.4633 | 0.5614 | 0.024* | |
C7 | 0.77816 (18) | 0.5780 (4) | 0.4383 (4) | 0.0168 (5) | |
H7 | 0.7505 | 0.4517 | 0.4008 | 0.020* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Mn1 | 0.0082 (2) | 0.0104 (3) | 0.0089 (2) | 0.00104 (17) | −0.00066 (17) | −0.00106 (17) |
O1 | 0.0120 (8) | 0.0117 (8) | 0.0150 (8) | 0.0013 (6) | −0.0025 (6) | 0.0011 (6) |
O2 | 0.0145 (8) | 0.0125 (8) | 0.0131 (8) | 0.0030 (7) | 0.0025 (6) | 0.0003 (6) |
O3 | 0.0200 (9) | 0.0128 (8) | 0.0106 (8) | −0.0009 (7) | 0.0010 (7) | 0.0003 (7) |
F1 | 0.0112 (7) | 0.0423 (11) | 0.0272 (9) | −0.0031 (7) | −0.0071 (6) | −0.0018 (8) |
C1 | 0.0092 (10) | 0.0115 (10) | 0.0091 (10) | −0.0004 (8) | 0.0024 (8) | 0.0008 (8) |
C2 | 0.0117 (10) | 0.0154 (11) | 0.0097 (10) | −0.0011 (8) | 0.0010 (8) | −0.0007 (8) |
C3 | 0.0163 (12) | 0.0152 (12) | 0.0185 (12) | −0.0015 (9) | −0.0002 (9) | −0.0012 (9) |
C4 | 0.0176 (12) | 0.0210 (13) | 0.0226 (13) | −0.0073 (10) | −0.0003 (10) | −0.0053 (10) |
C5 | 0.0083 (10) | 0.0314 (15) | 0.0147 (11) | −0.0023 (10) | −0.0014 (9) | −0.0008 (10) |
C6 | 0.0153 (12) | 0.0219 (13) | 0.0216 (13) | 0.0046 (10) | −0.0016 (10) | 0.0013 (10) |
C7 | 0.0154 (11) | 0.0153 (12) | 0.0184 (12) | 0.0002 (9) | −0.0016 (9) | −0.0010 (9) |
Mn1—O1 | 2.1489 (17) | C1—C2 | 1.498 (3) |
Mn1—O1i | 2.1489 (17) | C2—C3 | 1.391 (3) |
Mn1—O2 | 2.1728 (17) | C2—C7 | 1.390 (3) |
Mn1—O2i | 2.1728 (17) | C3—H3 | 0.9500 |
Mn1—O3 | 2.1988 (19) | C4—C3 | 1.392 (4) |
Mn1—O3i | 2.1988 (19) | C4—H4 | 0.9500 |
O1—C1ii | 1.257 (3) | C5—C4 | 1.375 (4) |
O2—C1 | 1.268 (3) | C6—C5 | 1.370 (4) |
O3—H31 | 0.82 (4) | C6—H6 | 0.9500 |
O3—H32 | 0.79 (4) | C7—C6 | 1.394 (4) |
F1—C5 | 1.362 (3) | C7—H7 | 0.9500 |
C1—O1iii | 1.257 (3) | ||
O1—Mn1—O1i | 180.0 | O1iii—C1—C2 | 117.9 (2) |
O1—Mn1—O2 | 84.62 (7) | O2—C1—C2 | 118.1 (2) |
O1i—Mn1—O2 | 95.38 (7) | C3—C2—C1 | 119.9 (2) |
O1—Mn1—O2i | 95.38 (7) | C7—C2—C1 | 120.0 (2) |
O1i—Mn1—O2i | 84.62 (7) | C7—C2—C3 | 120.2 (2) |
O1—Mn1—O3 | 94.69 (7) | C2—C3—C4 | 120.0 (2) |
O1i—Mn1—O3 | 85.31 (7) | C2—C3—H3 | 120.0 |
O1—Mn1—O3i | 85.31 (7) | C4—C3—H3 | 120.0 |
O1i—Mn1—O3i | 94.69 (7) | C3—C4—H4 | 121.0 |
O2—Mn1—O2i | 180.0 | C5—C4—C3 | 118.0 (2) |
O2—Mn1—O3 | 88.55 (7) | C5—C4—H4 | 121.0 |
O2i—Mn1—O3 | 91.45 (7) | F1—C5—C4 | 118.1 (2) |
O2—Mn1—O3i | 91.45 (7) | F1—C5—C6 | 118.2 (2) |
O2i—Mn1—O3i | 88.55 (7) | C6—C5—C4 | 123.7 (2) |
O3—Mn1—O3i | 180.00 (10) | C5—C6—C7 | 117.9 (2) |
C1ii—O1—Mn1 | 134.33 (16) | C5—C6—H6 | 121.1 |
C1—O2—Mn1 | 123.85 (15) | C7—C6—H6 | 121.1 |
Mn1—O3—H31 | 124 (3) | C2—C7—C6 | 120.2 (2) |
Mn1—O3—H32 | 118 (3) | C2—C7—H7 | 119.9 |
H31—O3—H32 | 108 (4) | C6—C7—H7 | 119.9 |
O1iii—C1—O2 | 124.0 (2) | ||
O2—Mn1—O1—C1ii | −106.1 (2) | O2—C1—C2—C7 | 169.1 (2) |
O2i—Mn1—O1—C1ii | 73.9 (2) | C1—C2—C3—C4 | −178.6 (2) |
O3—Mn1—O1—C1ii | −18.0 (2) | C7—C2—C3—C4 | 1.1 (4) |
O3i—Mn1—O1—C1ii | 162.0 (2) | C1—C2—C7—C6 | 179.9 (2) |
O1i—Mn1—O2—C1 | 41.54 (19) | C3—C2—C7—C6 | 0.2 (4) |
O3—Mn1—O2—C1 | 126.69 (19) | C5—C4—C3—C2 | −1.4 (4) |
O3i—Mn1—O2—C1 | −53.31 (19) | F1—C5—C4—C3 | −179.8 (2) |
Mn1—O2—C1—O1iii | 93.1 (3) | C6—C5—C4—C3 | 0.5 (4) |
Mn1—O2—C1—C2 | −86.2 (2) | C7—C6—C5—F1 | −179.0 (2) |
O1iii—C1—C2—C3 | 169.5 (2) | C7—C6—C5—C4 | 0.7 (4) |
O1iii—C1—C2—C7 | −10.3 (3) | C2—C7—C6—C5 | −1.1 (4) |
O2—C1—C2—C3 | −11.2 (3) |
Symmetry codes: (i) −x+1, −y+2, −z+1; (ii) −x+1, y+1/2, −z+1/2; (iii) −x+1, y−1/2, −z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H32···O2ii | 0.79 (4) | 2.51 (4) | 3.039 (3) | 125 (4) |
O3—H32···O1ii | 0.79 (4) | 2.18 (4) | 2.935 (3) | 158 (4) |
Symmetry code: (ii) −x+1, y+1/2, −z+1/2. |
Experimental details
Crystal data | |
Chemical formula | [Mn(C7H4FO2)2(H2O)2] |
Mr | 369.18 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 100 |
a, b, c (Å) | 14.5065 (6), 6.6107 (3), 7.3708 (3) |
β (°) | 98.179 (2) |
V (Å3) | 699.66 (5) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.00 |
Crystal size (mm) | 0.34 × 0.27 × 0.24 |
Data collection | |
Diffractometer | Bruker Kappa APEXII CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 2005) |
Tmin, Tmax | 0.728, 0.786 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 11656, 1758, 1720 |
Rint | 0.029 |
(sin θ/λ)max (Å−1) | 0.671 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.039, 0.111, 1.28 |
No. of reflections | 1758 |
No. of parameters | 114 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 1.24, −0.45 |
Computer programs: APEX2 (Bruker, 2007), SAINT (Bruker, 2007), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), ORTEP-3 for Windows (Farrugia, 1997), WinGX publication routines (Farrugia, 1999) and PLATON (Spek, 2009).
D—H···A | D—H | H···A | D···A | D—H···A |
O3—H32···O2i | 0.79 (4) | 2.51 (4) | 3.039 (3) | 125 (4) |
O3—H32···O1i | 0.79 (4) | 2.18 (4) | 2.935 (3) | 158 (4) |
Symmetry code: (i) −x+1, y+1/2, −z+1/2. |
As a part of our ongoing investigations of transition metal complexes of nicotinamide (NA), one form of niacin (Krishnamachari, 1974), and/or the nicotinic acid derivative N,N-diethylnicotinamide (DENA), an important respiratory stimulant (Bigoli et al., 1972), the title compound was synthesized and its crystal structure is reported herein.
In the title two-dimensional polymeric structure the MnII atom is located on a centre of invesion, and surrounded by four 4-fluorobenzoate (PFB) anions and two water molecules (Fig. 1). The PFB anions bridge the symmetry related Mn atoms. The four O atoms [O1, O2, O1'' and O2'', symmetry code: ('') -x, -y, -z] in the equatorial plane around the Mn atom form a slightly distorted square-planar arrangement, while the slightly distorted octahedral coordination is completed by the symmetry related O atoms of the coordinated water molecules (O3 and O3'') in the axial positions (Fig. 1).
The near equalities of the C1—O1 [1.257 (3) Å] and C1—O2 [1.268 (3) Å] bonds in the carboxylate group indicate a delocalized bonding arrangement, rather than localized single and double bonds, and may be compared with the corresponding distances: 1.263 (2), 1.279 (2), 1.263 (2) and 1.278 (2) Å in {[Mn(C11H14NO2)2(H2O)3].2(H2O)}n, (II) (Hökelek et al., 2009), 1.256 (6) and 1.245 (6) Å in [Mn(DENA)2(C7H4ClO2)2(H2O)2], (III) (Hökelek et al., 2008) and 1.265 (6) and 1.275 (6) Å in [Mn(C9H10NO2)2(H2O)4].2(H2O), (IV) (Hökelek & Necefoğlu, 2007).
The Mn—O bond lengths are in the range of 2.1489 (17) - 2.1988 (19) Å, and are close to standard values (Allen et al., 1987) with an average Mn-O bond length of 2.1735 (18) Å. The Mn atom is displaced out of the least-square plane of the carboxylate group (O1/C1/O2) by -1.5976 (1) Å. The dihedral angle between the planar carboxylate group and the adjacent benzene ring A (C2—C7) is 27.29 (16)°.
In the crystal structure, (Fig. 2), intermolecular O—H···O hydrogen bonds (Table 1) link the manganese-carboxylate units, and may be effective in the stabilization of the structure. The π···π contacts between the benzene rings, Cg1—Cg1i [symmetry code: (i) x, 1/2 - y, z - 1/2, where Cg1 is the centroid of the ring A (C2—C7)] may further stabilize the structure, with a centroid-centroid distance of 3.6894 (15) Å.