

Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536814020625/su2780sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536814020625/su2780Isup2.hkl |
![]() | Chemical Markup Language (CML) file https://doi.org/10.1107/S1600536814020625/su2780Isup3.cml |
CCDC reference: 975488
Key indicators
- Single-crystal X-ray study
- T = 293 K
- Mean
(C-C) = 0.005 Å
- R factor = 0.074
- wR factor = 0.288
- Data-to-parameter ratio = 18.1
checkCIF/PLATON results
No syntax errors found
Alert level C RFACR01_ALERT_3_C The value of the weighted R factor is > 0.25 Weighted R factor given 0.288 PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.977 Note PLAT084_ALERT_3_C High wR2 Value (i.e. > 0.25) ................... 0.29 Report PLAT230_ALERT_2_C Hirshfeld Test Diff for C11 -- C12 .. 5.2 su PLAT241_ALERT_2_C High Ueq as Compared to Neighbors for ..... C12 Check PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.2 Note PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.0054 Ang. PLAT412_ALERT_2_C Short Intra XH3 .. XHn H7 .. H20A .. 1.82 Ang. PLAT414_ALERT_2_C Short Intra D-H..H-X H7A .. H25A .. 1.95 Ang. PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 28.094 Check PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 4.458 Check PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 68 Report PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 1 Note PLAT918_ALERT_3_C Reflection(s) with I(obs) much smaller I(calc) . 12 Check PLAT939_ALERT_3_C Large Value of Not (SHELXL) Weight Optimized S . 28.29
Alert level G PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF Please Do ! PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 8 Report PLAT042_ALERT_1_G Calc. and Reported MoietyFormula Strings Differ Please Check PLAT072_ALERT_2_G SHELXL First Parameter in WGHT Unusually Large. 0.16 Report PLAT199_ALERT_1_G Reported _cell_measurement_temperature ..... (K) 293 Check PLAT200_ALERT_1_G Reported _diffrn_ambient_temperature ..... (K) 293 Check PLAT333_ALERT_2_G Check Large Av C6-Ring C-C Dist. C14 -C19 1.44 Ang. PLAT793_ALERT_4_G The Model has Chirality at C7 ............. R Verify PLAT899_ALERT_4_G SHELXL97 is Deprecated and Succeeded by SHELXL 2014 Note PLAT910_ALERT_3_G Missing # of FCF Reflections Below Th(Min) ..... 3 Report PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 64 Note
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 15 ALERT level C = Check. Ensure it is not caused by an omission or oversight 11 ALERT level G = General information/check it is not something unexpected 3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 11 ALERT type 3 Indicator that the structure quality may be low 3 ALERT type 4 Improvement, methodology, query or suggestion 2 ALERT type 5 Informative message, check
Seratrodast is the first thromboxane A2 receptor antagonist to have been developed as an anti-asthmatic drug (Samara, 1996). This drug molecule with a carboxylic group is practically insoluble in water. Its new solid forms have been scarcely exploited and only a polymorphic transition was ever investigated (Urakami & Beezer, 2003). Tris(hydroxymethyl)amino methane, commonly called trometamol, is often used as a buffer in biochemical studies. It has been successfully exploited for improving properties of APIs such as ketoprofen (Zippel & Wagenitz, 2006). In this study, trometamol was employed to co-crystallize with seratrodast to give rise to a new crystalline form. To the best of our knowledge, the title salt is the first multi-component crystalline form of seratrodast to be reported.
The molecular structure of the title salt is illustrated in Fig. 1. It was clear from a difference Fourier map that the carboxylic group of seratrodast had transferred its proton to the amino N atom of trometamol. The bond distances C1—O1 and C1—O2 of the carboxylate group of the seratrodast anion are 1.258 (4) and 1.232 (4) Å, respectively. The phenyl ring is normal to the dioxocyclohexadiene ring, with a dihedral angle of 89.95 (19)°, and the alkyl chain has an extended conformation.
In the crystal, the trometamol cations are linked to the water molecules and to each other by N—H···O and O—H···O hydrogen bonds, forming sheets parallel to (100); see Table 1 and Fig 2. The seratrodast anions are linked to both sides of these sheets by O—H···O and C—H···O hydrogen bonds, forming a three-layer two-dimensional structure (Fig. 3 and Table 1). Further details of the hydrogen bonding are given below and in Table 1. The carboxylate anion interacts with one hydroxyl group of trometamol through strong hydrogen bonding [O6···O1 = 2.662 (3) Å]. There also exist hydrogen-bonding interactions between carboxylate anion and water molecule [O8···O2 = 2.617 (3) Å, O8···O1i = 2.667 (3) Å]. The protonated trometamol cation interacts with each other through three kinds of hydrogen-bonding interactions. An R22(11) heterosynthon is formed through hydrogen-bonding interactions between the hydroxyl groups [O5···O7iii = 2.714 (3) Å] and between the hydroxyl group and the amino group [N1···O6iii = 2.779 (3) Å]. Along the c axis, the R22(11) heterosynthon gives rise to a hydrogen-bonded chain of trometamol cations, which is further linked into a two-dimensional structure by hydrogen-bonding interactions between the amino and the hydroxyl groups [N1···O5ii = 2.935 (3) Å]. There also exist hydrogen-bonding interactions between water and trometamol [N1···O8i = 2.800 (4) Å; O7···O8iii = 2.686 (3) Å]. The various hydrogen-bonding interactions result in a two-dimensional layer structure in which the seratrodast anions are spread around two sides of the layer in an orderly manner (Table 1 and Fig. 3).
To the best of our knowledge, the title salt is the first multi-component crystalline form of seratrodast to be reported.
Seratrodast (354 mg, 1 mmol) and trometamol (121 mg, 1 mmol) were dissolved in methanol (15 ml). The resulting solution was kept in air and after several days yellow block-like crystals of the title salt were obtained.
Excess amounts of seratrodast and the title salt were suspended in 10 ml of water in screw-capped glass vials, respectively. These vials were kept at 310 K and were stirred at 100 r.p.m. using a magnetic stirrer. After 72 h, the suspensions were filtered through a 0.2 µm syringe filter. The filtered aliquots were sufficiently diluted, and the absorbances were measured at 268 nm in triplicate. Finally, the concentration of seratrodast after 72 h in each sample was determined from the previously made standard graph. A standard graph was made by measuring the absorbance of varied concentrations of seratrodast (2–16 mg/L) in water/methanol (9:1) solution using a UV-2500 spectrophotometer at 268 nm. The calibrated plot showed a good correlation coefficient (y = 0.04997x + 0.00459, R2 = 0.9991). After forming the title salt, the solubility of seratrodast was found to be greatly improved.
Crystal data, data collection and structure refinement details are summarized in Table 2. The C-bound H atoms were positioned geometrically and refined as riding atoms: C—H = 0.95–1.00 Å with Uiso(H) = 1.2Ueq(C). The OH and NH3+ H atoms were located in difference Fourier maps and refined as riding atoms with Uiso(H) = 1.2Ueq(O,N).
Data collection: CrystalClear (Rigaku, 2000); cell refinement: CrystalClear (Rigaku, 2000); data reduction: CrystalClear (Rigaku, 2000); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: Mercury (Macrae et al., 2008); software used to prepare material for publication: SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009) and publCIF (Westrip, 2010).
C4H12NO3+·C22H25O4−·H2O | F(000) = 1064 |
Mr = 493.58 | Dx = 1.276 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 6295 reflections |
a = 23.506 (9) Å | θ = 2.1–27.5° |
b = 9.665 (4) Å | µ = 0.09 mm−1 |
c = 11.344 (5) Å | T = 293 K |
β = 94.223 (7)° | Prism, yellow |
V = 2570.0 (17) Å3 | 0.20 × 0.20 × 0.20 mm |
Z = 4 |
Rigaku Mercury CCD diffractometer | 5762 independent reflections |
Radiation source: fine-focus sealed tube | 3564 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.062 |
Detector resolution: 28.5714 pixels mm-1 | θmax = 27.5°, θmin = 2.6° |
CCD_Profile_fitting scans | h = −30→30 |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000) | k = −12→12 |
Tmin = 0.549, Tmax = 1.000 | l = −12→14 |
20028 measured reflections |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.074 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.288 | H-atom parameters constrained |
S = 1.10 | w = 1/[σ2(Fo2) + (0.1567P)2] where P = (Fo2 + 2Fc2)/3 |
5762 reflections | (Δ/σ)max < 0.001 |
319 parameters | Δρmax = 0.55 e Å−3 |
0 restraints | Δρmin = −0.42 e Å−3 |
C4H12NO3+·C22H25O4−·H2O | V = 2570.0 (17) Å3 |
Mr = 493.58 | Z = 4 |
Monoclinic, P21/c | Mo Kα radiation |
a = 23.506 (9) Å | µ = 0.09 mm−1 |
b = 9.665 (4) Å | T = 293 K |
c = 11.344 (5) Å | 0.20 × 0.20 × 0.20 mm |
β = 94.223 (7)° |
Rigaku Mercury CCD diffractometer | 5762 independent reflections |
Absorption correction: multi-scan (CrystalClear; Rigaku, 2000) | 3564 reflections with I > 2σ(I) |
Tmin = 0.549, Tmax = 1.000 | Rint = 0.062 |
20028 measured reflections |
R[F2 > 2σ(F2)] = 0.074 | 0 restraints |
wR(F2) = 0.288 | H-atom parameters constrained |
S = 1.10 | Δρmax = 0.55 e Å−3 |
5762 reflections | Δρmin = −0.42 e Å−3 |
319 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
O1 | 0.38025 (10) | 0.4145 (2) | 0.4397 (2) | 0.0447 (6) | |
O2 | 0.38047 (12) | 0.4204 (3) | 0.6328 (2) | 0.0537 (7) | |
O3 | 0.09684 (12) | 0.0531 (3) | 0.8988 (3) | 0.0749 (9) | |
O4 | 0.25430 (13) | −0.0713 (4) | 1.2339 (3) | 0.0789 (10) | |
O5 | 0.44774 (10) | 0.5677 (2) | 0.17616 (18) | 0.0408 (6) | |
O6 | 0.44283 (9) | 0.6368 (2) | 0.49902 (17) | 0.0389 (6) | |
O7 | 0.42596 (11) | 0.9565 (2) | 0.43874 (19) | 0.0482 (6) | |
O8 | 0.42283 (9) | 0.2989 (2) | 0.8260 (2) | 0.0440 (6) | |
H8B | 0.4079 | 0.3136 | 0.7498 | 0.053* | |
H1C | 0.5077 | 0.7821 | 0.1992 | 0.053* | |
H7A | 0.4222 | 1.0380 | 0.3969 | 0.053* | |
H1B | 0.4962 | 0.9171 | 0.2650 | 0.053* | |
H1A | 0.4590 | 0.8684 | 0.1637 | 0.053* | |
H8A | 0.4059 | 0.2252 | 0.8599 | 0.053* | |
H5 | 0.4389 | 0.5703 | 0.0917 | 0.053* | |
H6 | 0.4274 | 0.5623 | 0.4592 | 0.053* | |
N1 | 0.47892 (10) | 0.8382 (3) | 0.2369 (2) | 0.0333 (6) | |
C1 | 0.36324 (13) | 0.3727 (3) | 0.5360 (3) | 0.0339 (7) | |
C2 | 0.31629 (15) | 0.2633 (4) | 0.5285 (3) | 0.0469 (8) | |
H2A | 0.2801 | 0.3087 | 0.5001 | 0.056* | |
H2B | 0.3254 | 0.1944 | 0.4681 | 0.056* | |
C3 | 0.30659 (14) | 0.1871 (4) | 0.6411 (3) | 0.0470 (8) | |
H3A | 0.3018 | 0.2554 | 0.7047 | 0.056* | |
H3B | 0.3408 | 0.1309 | 0.6644 | 0.056* | |
C4 | 0.25457 (15) | 0.0926 (4) | 0.6304 (3) | 0.0465 (8) | |
H4A | 0.2204 | 0.1495 | 0.6080 | 0.056* | |
H4B | 0.2592 | 0.0259 | 0.5656 | 0.056* | |
C5 | 0.24405 (15) | 0.0123 (4) | 0.7421 (3) | 0.0502 (9) | |
H5A | 0.2750 | −0.0560 | 0.7580 | 0.060* | |
H5B | 0.2448 | 0.0769 | 0.8099 | 0.060* | |
C6 | 0.18728 (15) | −0.0623 (4) | 0.7312 (3) | 0.0475 (9) | |
H6A | 0.1567 | 0.0078 | 0.7184 | 0.057* | |
H6B | 0.1861 | −0.1212 | 0.6597 | 0.057* | |
C7 | 0.17374 (14) | −0.1507 (4) | 0.8334 (3) | 0.0452 (8) | |
H7 | 0.2046 | −0.2222 | 0.8397 | 0.054* | |
C8 | 0.11810 (13) | −0.2336 (4) | 0.8148 (3) | 0.0412 (8) | |
C9 | 0.08118 (15) | −0.2237 (4) | 0.7166 (4) | 0.0566 (10) | |
H9 | 0.0876 | −0.1562 | 0.6581 | 0.068* | |
C10 | 0.03397 (16) | −0.3118 (5) | 0.7012 (5) | 0.0725 (13) | |
H10 | 0.0092 | −0.3051 | 0.6314 | 0.087* | |
C13 | 0.10716 (18) | −0.3320 (5) | 0.8987 (4) | 0.0670 (12) | |
H13 | 0.1327 | −0.3426 | 0.9670 | 0.080* | |
C12 | 0.0590 (2) | −0.4157 (5) | 0.8836 (5) | 0.0860 (16) | |
H12 | 0.0512 | −0.4800 | 0.9437 | 0.103* | |
C11 | 0.02316 (17) | −0.4075 (5) | 0.7856 (5) | 0.0689 (12) | |
H11 | −0.0090 | −0.4671 | 0.7752 | 0.083* | |
C14 | 0.17815 (13) | −0.0778 (3) | 0.9519 (3) | 0.0397 (8) | |
C15 | 0.13375 (14) | 0.0248 (4) | 0.9771 (3) | 0.0463 (9) | |
C16 | 0.13441 (16) | 0.0942 (4) | 1.0924 (4) | 0.0531 (9) | |
C19 | 0.22057 (13) | −0.1042 (4) | 1.0361 (3) | 0.0426 (8) | |
C18 | 0.21906 (15) | −0.0386 (4) | 1.1559 (3) | 0.0494 (9) | |
C17 | 0.17570 (17) | 0.0652 (4) | 1.1788 (4) | 0.0555 (10) | |
C20 | 0.27017 (17) | −0.1961 (4) | 1.0232 (4) | 0.0655 (11) | |
H20A | 0.2645 | −0.2481 | 0.9491 | 0.098* | |
H20B | 0.2740 | −0.2607 | 1.0898 | 0.098* | |
H20C | 0.3049 | −0.1401 | 1.0220 | 0.098* | |
C21 | 0.0871 (2) | 0.1955 (6) | 1.1065 (5) | 0.0896 (16) | |
H21A | 0.0928 | 0.2408 | 1.1838 | 0.134* | |
H21B | 0.0505 | 0.1466 | 1.1011 | 0.134* | |
H21C | 0.0871 | 0.2653 | 1.0439 | 0.134* | |
C22 | 0.1798 (2) | 0.1297 (6) | 1.2988 (4) | 0.0891 (17) | |
H22A | 0.2194 | 0.1556 | 1.3207 | 0.134* | |
H22B | 0.1669 | 0.0634 | 1.3565 | 0.134* | |
H22C | 0.1556 | 0.2125 | 1.2979 | 0.134* | |
C23 | 0.47623 (12) | 0.6918 (3) | 0.4125 (2) | 0.0319 (6) | |
H23A | 0.4992 | 0.6168 | 0.3801 | 0.038* | |
H23B | 0.5029 | 0.7612 | 0.4494 | 0.038* | |
C24 | 0.40803 (12) | 0.6541 (3) | 0.2309 (3) | 0.0346 (7) | |
H24A | 0.3833 | 0.5965 | 0.2781 | 0.042* | |
H24B | 0.3834 | 0.7023 | 0.1693 | 0.042* | |
C25 | 0.39738 (13) | 0.8612 (3) | 0.3592 (3) | 0.0392 (7) | |
H25A | 0.3773 | 0.9124 | 0.2930 | 0.047* | |
H25B | 0.3686 | 0.8093 | 0.4008 | 0.047* | |
C26 | 0.43939 (11) | 0.7603 (3) | 0.3108 (2) | 0.0296 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0627 (15) | 0.0412 (12) | 0.0308 (13) | −0.0161 (10) | 0.0075 (10) | 0.0027 (10) |
O2 | 0.0810 (18) | 0.0487 (14) | 0.0311 (13) | −0.0191 (12) | 0.0032 (12) | −0.0005 (11) |
O3 | 0.0648 (18) | 0.090 (2) | 0.067 (2) | 0.0198 (16) | −0.0195 (15) | 0.0060 (17) |
O4 | 0.0712 (19) | 0.099 (3) | 0.062 (2) | −0.0058 (17) | −0.0235 (15) | 0.0159 (18) |
O5 | 0.0564 (13) | 0.0365 (11) | 0.0280 (12) | 0.0050 (10) | −0.0064 (10) | −0.0036 (9) |
O6 | 0.0626 (14) | 0.0380 (12) | 0.0156 (10) | −0.0120 (10) | −0.0012 (9) | 0.0025 (9) |
O7 | 0.0854 (18) | 0.0351 (12) | 0.0226 (12) | 0.0038 (11) | −0.0057 (11) | 0.0000 (9) |
O8 | 0.0505 (13) | 0.0447 (13) | 0.0368 (13) | −0.0080 (10) | 0.0037 (10) | −0.0006 (10) |
N1 | 0.0433 (14) | 0.0333 (12) | 0.0227 (13) | −0.0094 (10) | −0.0014 (10) | 0.0024 (10) |
C1 | 0.0450 (17) | 0.0294 (14) | 0.0279 (17) | 0.0010 (12) | 0.0072 (13) | 0.0024 (12) |
C2 | 0.052 (2) | 0.053 (2) | 0.0360 (19) | −0.0131 (16) | 0.0066 (15) | 0.0017 (16) |
C3 | 0.0459 (18) | 0.052 (2) | 0.044 (2) | −0.0116 (15) | 0.0043 (15) | 0.0099 (16) |
C4 | 0.0498 (19) | 0.052 (2) | 0.038 (2) | −0.0124 (15) | 0.0065 (15) | 0.0046 (16) |
C5 | 0.053 (2) | 0.057 (2) | 0.040 (2) | −0.0163 (16) | 0.0010 (16) | 0.0065 (17) |
C6 | 0.052 (2) | 0.056 (2) | 0.0357 (19) | −0.0158 (16) | 0.0109 (15) | −0.0008 (16) |
C7 | 0.0446 (18) | 0.053 (2) | 0.0377 (19) | −0.0103 (15) | 0.0033 (14) | −0.0009 (16) |
C8 | 0.0364 (16) | 0.0511 (19) | 0.0372 (18) | −0.0077 (14) | 0.0110 (13) | −0.0085 (15) |
C9 | 0.045 (2) | 0.066 (2) | 0.059 (2) | −0.0098 (17) | 0.0019 (17) | −0.006 (2) |
C10 | 0.043 (2) | 0.083 (3) | 0.089 (3) | −0.010 (2) | −0.015 (2) | −0.017 (3) |
C13 | 0.061 (2) | 0.081 (3) | 0.059 (3) | −0.031 (2) | 0.0041 (19) | 0.004 (2) |
C12 | 0.067 (3) | 0.073 (3) | 0.119 (5) | −0.032 (2) | 0.011 (3) | 0.008 (3) |
C11 | 0.044 (2) | 0.064 (3) | 0.099 (4) | −0.0171 (19) | 0.003 (2) | −0.012 (3) |
C14 | 0.0358 (16) | 0.0472 (18) | 0.0365 (18) | −0.0106 (13) | 0.0043 (13) | 0.0026 (15) |
C15 | 0.0420 (18) | 0.053 (2) | 0.043 (2) | −0.0035 (15) | −0.0028 (15) | 0.0080 (16) |
C16 | 0.056 (2) | 0.048 (2) | 0.057 (2) | −0.0016 (16) | 0.0137 (18) | −0.0014 (18) |
C19 | 0.0399 (17) | 0.0440 (17) | 0.044 (2) | −0.0069 (13) | 0.0005 (14) | 0.0041 (15) |
C18 | 0.0477 (19) | 0.055 (2) | 0.044 (2) | −0.0183 (16) | −0.0044 (16) | 0.0112 (17) |
C17 | 0.064 (2) | 0.054 (2) | 0.049 (2) | −0.0185 (18) | 0.0087 (18) | −0.0054 (18) |
C20 | 0.053 (2) | 0.060 (2) | 0.082 (3) | 0.0060 (18) | −0.003 (2) | 0.009 (2) |
C21 | 0.087 (3) | 0.082 (4) | 0.101 (4) | 0.029 (3) | 0.021 (3) | −0.009 (3) |
C22 | 0.120 (4) | 0.092 (4) | 0.058 (3) | −0.029 (3) | 0.025 (3) | −0.026 (3) |
C23 | 0.0401 (15) | 0.0323 (14) | 0.0224 (15) | −0.0022 (12) | −0.0033 (12) | 0.0006 (12) |
C24 | 0.0361 (15) | 0.0371 (15) | 0.0297 (16) | −0.0072 (12) | −0.0043 (12) | 0.0038 (13) |
C25 | 0.0427 (17) | 0.0362 (16) | 0.0385 (18) | 0.0011 (13) | 0.0009 (13) | 0.0006 (14) |
C26 | 0.0362 (15) | 0.0316 (14) | 0.0210 (14) | −0.0061 (11) | 0.0009 (11) | 0.0043 (12) |
O1—C1 | 1.258 (4) | C9—C10 | 1.400 (5) |
O2—C1 | 1.232 (4) | C9—H9 | 0.9500 |
O3—C15 | 1.226 (4) | C10—C11 | 1.369 (7) |
O4—C18 | 1.209 (4) | C10—H10 | 0.9500 |
O5—C24 | 1.428 (4) | C13—C12 | 1.392 (5) |
O5—H5 | 0.9657 | C13—H13 | 0.9500 |
O6—C23 | 1.406 (4) | C12—C11 | 1.347 (7) |
O6—H6 | 0.9109 | C12—H12 | 0.9500 |
O7—C25 | 1.423 (4) | C11—H11 | 0.9500 |
O7—H7A | 0.9202 | C14—C19 | 1.353 (4) |
O8—H8B | 0.9191 | C14—C15 | 1.483 (5) |
O8—H8A | 0.9142 | C15—C16 | 1.469 (5) |
N1—C26 | 1.499 (4) | C16—C17 | 1.357 (6) |
N1—H1C | 0.9892 | C16—C21 | 1.499 (6) |
N1—H1B | 0.9100 | C19—C20 | 1.482 (5) |
N1—H1A | 0.9682 | C19—C18 | 1.502 (5) |
C1—C2 | 1.526 (4) | C18—C17 | 1.467 (6) |
C2—C3 | 1.507 (5) | C17—C22 | 1.493 (6) |
C2—H2A | 0.9900 | C20—H20A | 0.9800 |
C2—H2B | 0.9900 | C20—H20B | 0.9800 |
C3—C4 | 1.523 (4) | C20—H20C | 0.9800 |
C3—H3A | 0.9900 | C21—H21A | 0.9800 |
C3—H3B | 0.9900 | C21—H21B | 0.9800 |
C4—C5 | 1.522 (5) | C21—H21C | 0.9800 |
C4—H4A | 0.9900 | C22—H22A | 0.9800 |
C4—H4B | 0.9900 | C22—H22B | 0.9800 |
C5—C6 | 1.514 (5) | C22—H22C | 0.9800 |
C5—H5A | 0.9900 | C23—C26 | 1.540 (4) |
C5—H5B | 0.9900 | C23—H23A | 0.9900 |
C6—C7 | 1.493 (5) | C23—H23B | 0.9900 |
C6—H6A | 0.9900 | C24—C26 | 1.524 (4) |
C6—H6B | 0.9900 | C24—H24A | 0.9900 |
C7—C14 | 1.515 (5) | C24—H24B | 0.9900 |
C7—C8 | 1.535 (4) | C25—C26 | 1.519 (4) |
C7—H7 | 1.0000 | C25—H25A | 0.9900 |
C8—C9 | 1.364 (5) | C25—H25B | 0.9900 |
C8—C13 | 1.383 (5) | ||
C24—O5—H5 | 108.4 | C12—C11—C10 | 118.7 (4) |
C23—O6—H6 | 100.0 | C12—C11—H11 | 120.6 |
C25—O7—H7A | 101.8 | C10—C11—H11 | 120.6 |
H8B—O8—H8A | 111.6 | C19—C14—C15 | 118.8 (3) |
C26—N1—H1C | 116.1 | C19—C14—C7 | 122.5 (3) |
C26—N1—H1B | 120.2 | C15—C14—C7 | 118.7 (3) |
H1C—N1—H1B | 108.0 | O3—C15—C16 | 120.2 (4) |
C26—N1—H1A | 110.6 | O3—C15—C14 | 118.7 (3) |
H1C—N1—H1A | 95.6 | C16—C15—C14 | 121.1 (3) |
H1B—N1—H1A | 102.8 | C17—C16—C15 | 120.6 (4) |
O2—C1—O1 | 123.3 (3) | C17—C16—C21 | 123.7 (4) |
O2—C1—C2 | 119.9 (3) | C15—C16—C21 | 115.7 (4) |
O1—C1—C2 | 116.7 (3) | C14—C19—C20 | 126.0 (3) |
C3—C2—C1 | 116.4 (3) | C14—C19—C18 | 119.6 (3) |
C3—C2—H2A | 108.2 | C20—C19—C18 | 114.4 (3) |
C1—C2—H2A | 108.2 | O4—C18—C17 | 119.8 (4) |
C3—C2—H2B | 108.2 | O4—C18—C19 | 119.4 (4) |
C1—C2—H2B | 108.2 | C17—C18—C19 | 120.8 (3) |
H2A—C2—H2B | 107.3 | C16—C17—C18 | 118.8 (4) |
C2—C3—C4 | 113.3 (3) | C16—C17—C22 | 124.5 (4) |
C2—C3—H3A | 108.9 | C18—C17—C22 | 116.7 (4) |
C4—C3—H3A | 108.9 | C19—C20—H20A | 109.5 |
C2—C3—H3B | 108.9 | C19—C20—H20B | 109.5 |
C4—C3—H3B | 108.9 | H20A—C20—H20B | 109.5 |
H3A—C3—H3B | 107.7 | C19—C20—H20C | 109.5 |
C5—C4—C3 | 114.7 (3) | H20A—C20—H20C | 109.5 |
C5—C4—H4A | 108.6 | H20B—C20—H20C | 109.5 |
C3—C4—H4A | 108.6 | C16—C21—H21A | 109.5 |
C5—C4—H4B | 108.6 | C16—C21—H21B | 109.5 |
C3—C4—H4B | 108.6 | H21A—C21—H21B | 109.5 |
H4A—C4—H4B | 107.6 | C16—C21—H21C | 109.5 |
C6—C5—C4 | 111.8 (3) | H21A—C21—H21C | 109.5 |
C6—C5—H5A | 109.3 | H21B—C21—H21C | 109.5 |
C4—C5—H5A | 109.3 | C17—C22—H22A | 109.5 |
C6—C5—H5B | 109.3 | C17—C22—H22B | 109.5 |
C4—C5—H5B | 109.3 | H22A—C22—H22B | 109.5 |
H5A—C5—H5B | 107.9 | C17—C22—H22C | 109.5 |
C7—C6—C5 | 116.5 (3) | H22A—C22—H22C | 109.5 |
C7—C6—H6A | 108.2 | H22B—C22—H22C | 109.5 |
C5—C6—H6A | 108.2 | O6—C23—C26 | 111.9 (2) |
C7—C6—H6B | 108.2 | O6—C23—H23A | 109.2 |
C5—C6—H6B | 108.2 | C26—C23—H23A | 109.2 |
H6A—C6—H6B | 107.3 | O6—C23—H23B | 109.2 |
C6—C7—C14 | 114.7 (3) | C26—C23—H23B | 109.2 |
C6—C7—C8 | 114.9 (3) | H23A—C23—H23B | 107.9 |
C14—C7—C8 | 111.5 (3) | O5—C24—C26 | 110.5 (2) |
C6—C7—H7 | 104.8 | O5—C24—H24A | 109.6 |
C14—C7—H7 | 104.8 | C26—C24—H24A | 109.6 |
C8—C7—H7 | 104.8 | O5—C24—H24B | 109.6 |
C9—C8—C13 | 118.1 (3) | C26—C24—H24B | 109.6 |
C9—C8—C7 | 124.0 (3) | H24A—C24—H24B | 108.1 |
C13—C8—C7 | 117.7 (3) | O7—C25—C26 | 110.8 (2) |
C8—C9—C10 | 120.7 (4) | O7—C25—H25A | 109.5 |
C8—C9—H9 | 119.7 | C26—C25—H25A | 109.5 |
C10—C9—H9 | 119.7 | O7—C25—H25B | 109.5 |
C11—C10—C9 | 120.7 (4) | C26—C25—H25B | 109.5 |
C13—C10—H10 | 119.7 | H25A—C25—H25B | 108.1 |
C9—C10—H10 | 119.7 | N1—C26—C25 | 109.1 (2) |
C8—C13—C12 | 120.4 (4) | N1—C26—C24 | 107.3 (2) |
C8—C13—H13 | 119.8 | C25—C26—C24 | 110.4 (2) |
C12—C13—H13 | 119.8 | N1—C26—C23 | 107.3 (2) |
C11—C12—C13 | 121.4 (5) | C25—C26—C23 | 110.5 (2) |
C11—C12—H12 | 119.3 | C24—C26—C23 | 112.1 (2) |
C13—C12—H12 | 119.3 |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···O8i | 0.99 | 1.85 | 2.800 (4) | 160 |
N1—H1B···O5ii | 0.91 | 2.04 | 2.935 (3) | 166 |
N1—H1A···O6iii | 0.97 | 1.88 | 2.779 (3) | 153 |
O5—H5···O7iii | 0.97 | 1.76 | 2.714 (3) | 170 |
O6—H6···O1 | 0.91 | 1.81 | 2.662 (3) | 154 |
O7—H7A···O8iii | 0.92 | 1.77 | 2.686 (3) | 173 |
O8—H8B···O2 | 0.92 | 1.76 | 2.617 (3) | 1523 |
O8—H8A···O1iv | 0.91 | 1.76 | 2.667 (3) | 173 |
C24—H24A···O1 | 0.99 | 2.55 | 3.410 (4) | 146 |
C25—H25A···O2iii | 0.99 | 2.44 | 3.326 (4) | 149 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y+1/2, −z+1/2; (iii) x, −y+3/2, z−1/2; (iv) x, −y+1/2, z+1/2. |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1C···O8i | 0.99 | 1.85 | 2.800 (4) | 160 |
N1—H1B···O5ii | 0.91 | 2.04 | 2.935 (3) | 166 |
N1—H1A···O6iii | 0.97 | 1.88 | 2.779 (3) | 153 |
O5—H5···O7iii | 0.97 | 1.76 | 2.714 (3) | 170 |
O6—H6···O1 | 0.91 | 1.81 | 2.662 (3) | 154 |
O7—H7A···O8iii | 0.92 | 1.77 | 2.686 (3) | 173 |
O8—H8B···O2 | 0.92 | 1.76 | 2.617 (3) | 1523 |
O8—H8A···O1iv | 0.91 | 1.76 | 2.667 (3) | 173 |
C24—H24A···O1 | 0.99 | 2.55 | 3.410 (4) | 146 |
C25—H25A···O2iii | 0.99 | 2.44 | 3.326 (4) | 149 |
Symmetry codes: (i) −x+1, −y+1, −z+1; (ii) −x+1, y+1/2, −z+1/2; (iii) x, −y+3/2, z−1/2; (iv) x, −y+1/2, z+1/2. |
Experimental details
Crystal data | |
Chemical formula | C4H12NO3+·C22H25O4−·H2O |
Mr | 493.58 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 293 |
a, b, c (Å) | 23.506 (9), 9.665 (4), 11.344 (5) |
β (°) | 94.223 (7) |
V (Å3) | 2570.0 (17) |
Z | 4 |
Radiation type | Mo Kα |
µ (mm−1) | 0.09 |
Crystal size (mm) | 0.20 × 0.20 × 0.20 |
Data collection | |
Diffractometer | Rigaku Mercury CCD diffractometer |
Absorption correction | Multi-scan (CrystalClear; Rigaku, 2000) |
Tmin, Tmax | 0.549, 1.000 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 20028, 5762, 3564 |
Rint | 0.062 |
(sin θ/λ)max (Å−1) | 0.649 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.074, 0.288, 1.10 |
No. of reflections | 5762 |
No. of parameters | 319 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.55, −0.42 |
Computer programs: CrystalClear (Rigaku, 2000), SHELXS97 (Sheldrick, 2008), Mercury (Macrae et al., 2008), SHELXL97 (Sheldrick, 2008), PLATON (Spek, 2009) and publCIF (Westrip, 2010).