The title bipyridine derivative, C
16H
16N
2O
4, crystallized with two half molecules in the asymmetric unit. The whole molecules (
A and
B) are generated by inversion symmetry with the mid-points of the bridging C—C bonds of the bipyridine units being located on crystallographic inversion centers. In the crystal, molecules are linked by C—H
O hydrogen bonds, forming sheets parallel to (120). The sheets are linked by C—H
N hydrogen bonds, forming a three-dimensional framework.
Supporting information
CCDC reference: 1507876
Key indicators
- Single-crystal X-ray study
- T = 100 K
- Mean (C-C) = 0.004 Å
- R factor = 0.057
- wR factor = 0.141
- Data-to-parameter ratio = 13.3
checkCIF/PLATON results
No syntax errors found
Alert level C
PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.27 Report
PLAT230_ALERT_2_C Hirshfeld Test Diff for O2' -- C7' .. 7.0 s.u.
PLAT906_ALERT_3_C Large K value in the Analysis of Variance ...... 12.209 Check
PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.600 8 Report
PLAT978_ALERT_2_C Number C-C Bonds with Positive Residual Density 0 Note
Alert level G
PLAT154_ALERT_1_G The s.u.'s on the Cell Angles are Equal ..(Note) 0.007 Degree
PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 5 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 3 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
5 ALERT level C = Check. Ensure it is not caused by an omission or oversight
3 ALERT level G = General information/check it is not something unexpected
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
3 ALERT type 2 Indicator that the structure model may be wrong or deficient
2 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
Data collection: APEX2 (Bruker, 2013); cell refinement: SAINT (Bruker, 2013); data reduction: SAINT (Bruker, 2013); program(s) used to solve structure: SHEXLS2014 (Sheldrick, 2008); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015); molecular graphics: OLEX2 (Dolomanov et al., 2009) and Mercury (Macrae et
al., 2008); software used to prepare material for publication: OLEX2 (Dolomanov et al., 2009).
Diethyl 2,2'-bipyridine-4,4'-dicarboxylate
top
Crystal data top
C16H16N2O4 | Z = 2 |
Mr = 300.31 | F(000) = 316 |
Triclinic, P1 | Dx = 1.380 Mg m−3 |
a = 3.9059 (8) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 13.493 (3) Å | Cell parameters from 2248 reflections |
c = 13.767 (3) Å | θ = 3.0–25.0° |
α = 92.212 (7)° | µ = 0.10 mm−1 |
β = 93.163 (7)° | T = 100 K |
γ = 93.016 (7)° | Plate, colorless |
V = 722.8 (3) Å3 | 0.13 × 0.08 × 0.06 mm |
Data collection top
Bruker APEXII Ultra diffractometer | 2664 independent reflections |
Radiation source: Micro Focus Rotating Anode, Bruker TXS | 1699 reflections with I > 2σ(I) |
Double Bounce Multilayer Mirrors monochromator | Rint = 0.054 |
Detector resolution: 7.9 pixels mm-1 | θmax = 25.4°, θmin = 1.5° |
ω and φ scans | h = −4→4 |
Absorption correction: multi-scan (SADABS; Bruker, 2013) | k = −16→16 |
Tmin = 0.066, Tmax = 0.092 | l = −16→16 |
10150 measured reflections | |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.057 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.141 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0623P)2 + 0.352P] where P = (Fo2 + 2Fc2)/3 |
2664 reflections | (Δ/σ)max < 0.001 |
201 parameters | Δρmax = 0.59 e Å−3 |
0 restraints | Δρmin = −0.26 e Å−3 |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.6443 (6) | −0.08269 (16) | 0.09213 (16) | 0.0229 (6) | |
O1 | 0.1227 (5) | 0.21648 (14) | 0.24091 (14) | 0.0322 (5) | |
O2 | 0.2666 (5) | 0.12418 (13) | 0.36775 (13) | 0.0267 (5) | |
C1 | 0.5052 (6) | −0.00246 (18) | 0.05424 (19) | 0.0213 (6) | |
C2 | 0.3798 (7) | 0.0728 (2) | 0.1117 (2) | 0.0227 (6) | |
H2 | 0.2878 | 0.1291 | 0.0827 | 0.027* | |
C3 | 0.3909 (7) | 0.06454 (19) | 0.2116 (2) | 0.0230 (7) | |
C4 | 0.5353 (7) | −0.0181 (2) | 0.2512 (2) | 0.0250 (7) | |
H4 | 0.5496 | −0.0255 | 0.3196 | 0.030* | |
C5 | 0.6573 (7) | −0.0889 (2) | 0.1889 (2) | 0.0243 (7) | |
H5 | 0.7558 | −0.1452 | 0.2163 | 0.029* | |
C6 | 0.2460 (7) | 0.1439 (2) | 0.2732 (2) | 0.0238 (7) | |
C7 | 0.1308 (7) | 0.1979 (2) | 0.43362 (19) | 0.0268 (7) | |
H7A | −0.1157 | 0.2057 | 0.4167 | 0.032* | |
H7B | 0.2562 | 0.2631 | 0.4290 | 0.032* | |
C8 | 0.1788 (8) | 0.1608 (2) | 0.5350 (2) | 0.0322 (8) | |
H8A | 0.0535 | 0.0963 | 0.5385 | 0.048* | |
H8B | 0.0904 | 0.2084 | 0.5817 | 0.048* | |
H8C | 0.4237 | 0.1535 | 0.5508 | 0.048* | |
N1' | 0.6531 (6) | 0.41872 (16) | 0.40638 (16) | 0.0225 (6) | |
O1' | 0.1233 (5) | 0.71739 (14) | 0.26347 (13) | 0.0307 (5) | |
O2' | 0.2484 (5) | 0.62205 (13) | 0.13410 (13) | 0.0257 (5) | |
C1' | 0.5100 (6) | 0.49830 (18) | 0.44587 (19) | 0.0210 (6) | |
C2' | 0.3829 (7) | 0.57364 (19) | 0.39046 (19) | 0.0214 (6) | |
H2' | 0.2889 | 0.6296 | 0.4209 | 0.026* | |
C3' | 0.3960 (7) | 0.56565 (19) | 0.2899 (2) | 0.0213 (6) | |
C4' | 0.5453 (7) | 0.4843 (2) | 0.2487 (2) | 0.0231 (7) | |
H4' | 0.5623 | 0.4774 | 0.1803 | 0.028* | |
C5' | 0.6691 (7) | 0.4135 (2) | 0.3096 (2) | 0.0241 (7) | |
H5' | 0.7713 | 0.3580 | 0.2810 | 0.029* | |
C6' | 0.2446 (7) | 0.6440 (2) | 0.2295 (2) | 0.0219 (6) | |
C7' | 0.0956 (8) | 0.6935 (2) | 0.0684 (2) | 0.0325 (7) | |
H7'A | 0.2167 | 0.7597 | 0.0789 | 0.039* | |
H7'B | −0.1497 | 0.6999 | 0.0808 | 0.039* | |
C8' | 0.1316 (9) | 0.6543 (2) | −0.0342 (2) | 0.0401 (8) | |
H8'A | 0.0362 | 0.7007 | −0.0802 | 0.060* | |
H8'B | 0.0070 | 0.5894 | −0.0441 | 0.060* | |
H8'C | 0.3750 | 0.6473 | −0.0452 | 0.060* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0252 (13) | 0.0172 (12) | 0.0269 (14) | 0.0071 (10) | 0.0006 (10) | 0.0006 (10) |
O1 | 0.0430 (13) | 0.0242 (11) | 0.0301 (12) | 0.0145 (10) | −0.0005 (10) | −0.0027 (9) |
O2 | 0.0306 (11) | 0.0268 (11) | 0.0235 (11) | 0.0094 (9) | 0.0026 (8) | −0.0026 (8) |
C1 | 0.0165 (14) | 0.0190 (15) | 0.0278 (15) | 0.0007 (12) | −0.0008 (12) | −0.0017 (12) |
C2 | 0.0215 (15) | 0.0172 (14) | 0.0293 (17) | 0.0037 (12) | −0.0014 (12) | 0.0005 (12) |
C3 | 0.0185 (15) | 0.0202 (15) | 0.0301 (17) | 0.0034 (12) | −0.0001 (12) | −0.0015 (12) |
C4 | 0.0248 (16) | 0.0262 (16) | 0.0246 (16) | 0.0055 (13) | 0.0021 (13) | 0.0008 (13) |
C5 | 0.0242 (15) | 0.0193 (15) | 0.0305 (17) | 0.0093 (12) | 0.0016 (12) | 0.0038 (12) |
C6 | 0.0201 (15) | 0.0250 (16) | 0.0258 (17) | 0.0035 (13) | −0.0015 (12) | −0.0023 (13) |
C7 | 0.0290 (16) | 0.0262 (15) | 0.0255 (16) | 0.0089 (13) | 0.0022 (12) | −0.0072 (12) |
C8 | 0.0318 (18) | 0.0359 (18) | 0.0294 (18) | 0.0072 (14) | 0.0050 (13) | −0.0032 (14) |
N1' | 0.0224 (13) | 0.0187 (12) | 0.0264 (14) | 0.0045 (10) | 0.0011 (10) | −0.0022 (10) |
O1' | 0.0428 (13) | 0.0249 (11) | 0.0259 (12) | 0.0169 (10) | 0.0033 (9) | −0.0007 (9) |
O2' | 0.0327 (11) | 0.0242 (11) | 0.0206 (11) | 0.0105 (9) | −0.0005 (8) | −0.0023 (8) |
C1' | 0.0195 (15) | 0.0157 (15) | 0.0278 (15) | 0.0015 (12) | 0.0021 (12) | −0.0021 (12) |
C2' | 0.0220 (15) | 0.0157 (14) | 0.0269 (17) | 0.0057 (12) | 0.0047 (12) | −0.0030 (12) |
C3' | 0.0176 (14) | 0.0177 (14) | 0.0282 (17) | 0.0015 (12) | 0.0024 (12) | −0.0046 (12) |
C4' | 0.0235 (15) | 0.0240 (15) | 0.0221 (15) | 0.0053 (13) | 0.0010 (12) | −0.0006 (13) |
C5' | 0.0228 (15) | 0.0184 (14) | 0.0312 (18) | 0.0066 (12) | 0.0033 (12) | −0.0067 (12) |
C6' | 0.0194 (15) | 0.0208 (15) | 0.0252 (17) | 0.0008 (12) | 0.0003 (12) | −0.0004 (12) |
C7' | 0.0352 (18) | 0.0308 (17) | 0.0319 (18) | 0.0045 (14) | 0.0061 (14) | −0.0019 (14) |
C8' | 0.044 (2) | 0.047 (2) | 0.0287 (19) | 0.0099 (16) | 0.0006 (15) | −0.0062 (15) |
Geometric parameters (Å, º) top
N1—C1 | 1.347 (3) | N1'—C1' | 1.346 (3) |
N1—C5 | 1.336 (3) | N1'—C5' | 1.336 (3) |
O1—C6 | 1.203 (3) | O1'—C6' | 1.209 (3) |
O2—C6 | 1.338 (3) | O2'—C6' | 1.336 (3) |
O2—C7 | 1.460 (3) | O2'—C7' | 1.474 (3) |
C1—C1i | 1.496 (5) | C1'—C1'ii | 1.496 (5) |
C1—C2 | 1.389 (4) | C1'—C2' | 1.390 (4) |
C2—H2 | 0.9500 | C2'—H2' | 0.9500 |
C2—C3 | 1.382 (4) | C2'—C3' | 1.388 (4) |
C3—C4 | 1.392 (4) | C3'—C4' | 1.386 (4) |
C3—C6 | 1.494 (4) | C3'—C6' | 1.496 (4) |
C4—H4 | 0.9500 | C4'—H4' | 0.9500 |
C4—C5 | 1.381 (4) | C4'—C5' | 1.384 (4) |
C5—H5 | 0.9500 | C5'—H5' | 0.9500 |
C7—H7A | 0.9900 | C7'—H7'A | 0.9900 |
C7—H7B | 0.9900 | C7'—H7'B | 0.9900 |
C7—C8 | 1.507 (4) | C7'—C8' | 1.505 (4) |
C8—H8A | 0.9800 | C8'—H8'A | 0.9800 |
C8—H8B | 0.9800 | C8'—H8'B | 0.9800 |
C8—H8C | 0.9800 | C8'—H8'C | 0.9800 |
| | | |
C5—N1—C1 | 117.6 (2) | C5'—N1'—C1' | 117.3 (2) |
C6—O2—C7 | 115.9 (2) | C6'—O2'—C7' | 116.5 (2) |
N1—C1—C1i | 116.4 (3) | N1'—C1'—C1'ii | 116.4 (3) |
N1—C1—C2 | 122.5 (2) | N1'—C1'—C2' | 122.8 (2) |
C2—C1—C1i | 121.1 (3) | C2'—C1'—C1'ii | 120.8 (3) |
C1—C2—H2 | 120.4 | C1'—C2'—H2' | 120.6 |
C3—C2—C1 | 119.1 (2) | C3'—C2'—C1' | 118.8 (2) |
C3—C2—H2 | 120.4 | C3'—C2'—H2' | 120.6 |
C2—C3—C4 | 118.6 (2) | C2'—C3'—C6' | 119.1 (2) |
C2—C3—C6 | 119.1 (2) | C4'—C3'—C2' | 118.7 (2) |
C4—C3—C6 | 122.3 (3) | C4'—C3'—C6' | 122.1 (2) |
C3—C4—H4 | 120.7 | C3'—C4'—H4' | 120.8 |
C5—C4—C3 | 118.5 (3) | C5'—C4'—C3' | 118.5 (3) |
C5—C4—H4 | 120.7 | C5'—C4'—H4' | 120.8 |
N1—C5—C4 | 123.5 (2) | N1'—C5'—C4' | 123.8 (3) |
N1—C5—H5 | 118.2 | N1'—C5'—H5' | 118.1 |
C4—C5—H5 | 118.2 | C4'—C5'—H5' | 118.1 |
O1—C6—O2 | 124.3 (3) | O1'—C6'—O2' | 123.9 (2) |
O1—C6—C3 | 123.6 (3) | O1'—C6'—C3' | 123.6 (2) |
O2—C6—C3 | 112.1 (2) | O2'—C6'—C3' | 112.4 (2) |
O2—C7—H7A | 110.3 | O2'—C7'—H7'A | 110.3 |
O2—C7—H7B | 110.3 | O2'—C7'—H7'B | 110.3 |
O2—C7—C8 | 106.9 (2) | O2'—C7'—C8' | 107.2 (2) |
H7A—C7—H7B | 108.6 | H7'A—C7'—H7'B | 108.5 |
C8—C7—H7A | 110.3 | C8'—C7'—H7'A | 110.3 |
C8—C7—H7B | 110.3 | C8'—C7'—H7'B | 110.3 |
C7—C8—H8A | 109.5 | C7'—C8'—H8'A | 109.5 |
C7—C8—H8B | 109.5 | C7'—C8'—H8'B | 109.5 |
C7—C8—H8C | 109.5 | C7'—C8'—H8'C | 109.5 |
H8A—C8—H8B | 109.5 | H8'A—C8'—H8'B | 109.5 |
H8A—C8—H8C | 109.5 | H8'A—C8'—H8'C | 109.5 |
H8B—C8—H8C | 109.5 | H8'B—C8'—H8'C | 109.5 |
Symmetry codes: (i) −x+1, −y, −z; (ii) −x+1, −y+1, −z+1. |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O1′iii | 0.95 | 2.49 | 3.421 (3) | 167 |
C8—H8B···O1′iv | 0.98 | 2.52 | 3.465 (3) | 161 |
C5′—H5′···O1v | 0.95 | 2.47 | 3.404 (3) | 167 |
C8′—H8′A···O1vi | 0.98 | 2.58 | 3.518 (3) | 161 |
C7—H7B···N1′ | 0.99 | 2.58 | 3.565 (4) | 172 |
Symmetry codes: (iii) x+1, y−1, z; (iv) −x, −y+1, −z+1; (v) x+1, y, z; (vi) −x, −y+1, −z. |