The effect of different leaving groups on the substitution versus elimination outcomes with C-5 D-glucose derivatives was investigated.
Supporting information
CCDC references: 1844798; 1844797
Key indicators
Structure: 3
- Single-crystal X-ray study
- T = 190 K
- Mean (C-C) = 0.018 Å
- R factor = 0.094
- wR factor = 0.351
- Data-to-parameter ratio = 14.5
Structure: 4
- Single-crystal X-ray study
- T = 150 K
- Mean (C-C) = 0.002 Å
- R factor = 0.029
- wR factor = 0.085
- Data-to-parameter ratio = 16.3
checkCIF/PLATON results
No syntax errors found
Datablock: 3
Alert level A
DIFF019_ALERT_1_A _diffrn_standards_number is missing
Number of standards used in measurement.
DIFF020_ALERT_1_A _diffrn_standards_interval_count and
_diffrn_standards_interval_time are missing. Number of measurements
between standards or time (min) between standards.
DIFF022_ALERT_1_A _diffrn_standards_decay_% is missing
Percentage decrease in standards intensity.
Alert level B
PLAT340_ALERT_3_B Low Bond Precision on C-C Bonds ............... 0.01809 Ang.
Alert level C
PLAT084_ALERT_3_C High wR2 Value (i.e. > 0.25) ................... 0.35 Report
PLAT213_ALERT_2_C Atom C36 has ADP max/min Ratio ..... 3.2 prolat
PLAT234_ALERT_4_C Large Hirshfeld Difference S1 --C36 0.20 Ang.
PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of S1 Check
PLAT242_ALERT_2_C Low 'MainMol' Ueq as Compared to Neighbors of C7 Check
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 2.882 Check
PLAT976_ALERT_2_C Check Calcd Resid. Dens. 0.95A From O6 -0.47 eA-3
PLAT977_ALERT_2_C Check Negative Difference Density on H5 -0.34 eA-3
Alert level G
PLAT072_ALERT_2_G SHELXL First Parameter in WGHT Unusually Large 0.17 Report
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large 6.01 Why ?
PLAT395_ALERT_2_G Deviating X-O-Y Angle From 120 for O6 119.8 Degree
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O1 109.3 Degree
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O2 109.2 Degree
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O3 105.6 Degree
PLAT791_ALERT_4_G Model has Chirality at C1 (Chiral SPGR) R Verify
PLAT791_ALERT_4_G Model has Chirality at C2 (Chiral SPGR) R Verify
PLAT791_ALERT_4_G Model has Chirality at C3 (Chiral SPGR) S Verify
PLAT791_ALERT_4_G Model has Chirality at C4 (Chiral SPGR) S Verify
PLAT791_ALERT_4_G Model has Chirality at C5 (Chiral SPGR) R Verify
PLAT909_ALERT_3_G Percentage of I>2sig(I) Data at Theta(Max) Still 51% Note
PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 1 Note
PLAT961_ALERT_5_G Dataset Contains no Negative Intensities ....... Please Check
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 1 Info
3 ALERT level A = Most likely a serious problem - resolve or explain
1 ALERT level B = A potentially serious problem, consider carefully
8 ALERT level C = Check. Ensure it is not caused by an omission or oversight
15 ALERT level G = General information/check it is not something unexpected
3 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
12 ALERT type 2 Indicator that the structure model may be wrong or deficient
5 ALERT type 3 Indicator that the structure quality may be low
6 ALERT type 4 Improvement, methodology, query or suggestion
1 ALERT type 5 Informative message, check
Datablock: 4
Alert level C
PLAT230_ALERT_2_C Hirshfeld Test Diff for N1 --N2 . 5.2 s.u.
Alert level G
PLAT142_ALERT_4_G s.u. on b - Axis Small or Missing .............. 0.00010 Ang.
PLAT143_ALERT_4_G s.u. on c - Axis Small or Missing .............. 0.00020 Ang.
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O1 107.6 Degree
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O2 109.6 Degree
PLAT398_ALERT_2_G Deviating C-O-C Angle From 120 for O3 107.9 Degree
PLAT791_ALERT_4_G Model has Chirality at C1 (Chiral SPGR) R Verify
PLAT791_ALERT_4_G Model has Chirality at C2 (Chiral SPGR) R Verify
PLAT791_ALERT_4_G Model has Chirality at C3 (Chiral SPGR) S Verify
PLAT791_ALERT_4_G Model has Chirality at C4 (Chiral SPGR) R Verify
PLAT791_ALERT_4_G Model has Chirality at C5 (Chiral SPGR) S Verify
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 4 Note
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 16 Info
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
1 ALERT level C = Check. Ensure it is not caused by an omission or oversight
12 ALERT level G = General information/check it is not something unexpected
0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
5 ALERT type 2 Indicator that the structure model may be wrong or deficient
0 ALERT type 3 Indicator that the structure quality may be low
8 ALERT type 4 Improvement, methodology, query or suggestion
0 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level A
PUBL024_ALERT_1_A The number of authors is greater than 5.
Please specify the role of each of the co-authors
for your paper.
1 ALERT level A = Data missing that is essential or data in wrong format
0 ALERT level G = General alerts. Data that may be required is missing
Data collection: CrysAlis PRO (Rigaku OD, 2015) for (3); CrysAlis PRO (Agilent, 2015) for (4). Cell refinement: CrysAlis PRO (Rigaku OD, 2015) for (3); CrysAlis PRO (Agilent, 2015) for (4). Data reduction: CrysAlis PRO (Rigaku OD, 2015) for (3); CrysAlis PRO (Agilent, 2015) for (4). Program(s) used to solve structure: SHELXT2014/7 (Sheldrick, 2015a) for (3); SIR97 (Altomare et al., 1999) for (4). Program(s) used to refine structure: SHELXL2018/3 (Sheldrick, 2015b) for (3); SHELXL2018 (Sheldrick, 2015b) for (4). For both structures, molecular graphics: PLATON (Spek, 2009) and Mercury (Macrae et al., 2008). Software used to prepare material for publication: SHELXL2018/3 (Sheldrick, 2015b) and publCIF (Westrip, 2010) for (3); SHELXL2018 (Sheldrick, 2015b) and publCIF (Westrip, 2010) for (4).
1-[(3a
R,5
R,6
S,6a
R)-6-Benzyloxy-2,2-dimethyltetrahydrofuro[2,3-
d][1,3]dioxol-5-yl]-2-(trityloxy)ethyl
methanesulfonate (3)
top
Crystal data top
C36H38O8S | Dx = 1.284 Mg m−3 |
Mr = 630.72 | Cu Kα radiation, λ = 1.54184 Å |
Orthorhombic, P212121 | Cell parameters from 10052 reflections |
a = 10.0069 (5) Å | θ = 4.5–70.0° |
b = 10.1898 (7) Å | µ = 1.31 mm−1 |
c = 32.0045 (14) Å | T = 190 K |
V = 3263.4 (3) Å3 | Block, colourless |
Z = 4 | 0.3 × 0.25 × 0.2 mm |
F(000) = 1336 | |
Data collection top
Rigaku Xcalibur, Sapphire3, Gemini ultra diffractometer | 4263 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed X-ray tube, Enhance Ultra (Cu) X-ray Source | Rint = 0.068 |
ω scans | θmax = 68.0°, θmin = 4.6° |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2015) | h = −11→12 |
Tmin = 0.840, Tmax = 1.000 | k = −12→12 |
20834 measured reflections | l = −33→38 |
5928 independent reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.094 | w = 1/[σ2(Fo2) + (0.1748P)2 + 6.0087P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.351 | (Δ/σ)max < 0.001 |
S = 1.20 | Δρmax = 0.53 e Å−3 |
5928 reflections | Δρmin = −1.07 e Å−3 |
410 parameters | Extinction correction: (SHELXL-2018/3; Sheldrick 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0044 (11) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack x determined using 1367 quotients
[(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
Secondary atom site location: difference Fourier map | Absolute structure parameter: 0.004 (10) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
S1 | 0.5662 (3) | 0.7854 (3) | 0.46165 (7) | 0.0576 (8) | |
O1 | 0.5510 (8) | 0.6791 (7) | 0.31101 (19) | 0.0566 (19) | |
O2 | 0.6330 (10) | 0.7335 (8) | 0.2462 (2) | 0.067 (2) | |
O3 | 0.6539 (9) | 0.9404 (8) | 0.2696 (2) | 0.065 (2) | |
O4 | 0.4019 (8) | 0.8917 (7) | 0.3505 (2) | 0.0550 (18) | |
O5 | 0.7705 (7) | 0.5716 (7) | 0.3878 (2) | 0.0485 (16) | |
O6 | 0.6203 (9) | 0.7925 (8) | 0.4151 (2) | 0.063 (2) | |
O7 | 0.4808 (9) | 0.6727 (8) | 0.4660 (2) | 0.068 (2) | |
O8 | 0.5109 (13) | 0.9099 (9) | 0.4710 (3) | 0.094 (4) | |
C1 | 0.5280 (14) | 0.7491 (10) | 0.2743 (3) | 0.059 (3) | |
H1 | 0.440997 | 0.723237 | 0.261309 | 0.071* | |
C2 | 0.5292 (13) | 0.8954 (11) | 0.2854 (3) | 0.058 (3) | |
H2 | 0.450815 | 0.944503 | 0.273966 | 0.069* | |
C3 | 0.5350 (13) | 0.8960 (11) | 0.3333 (3) | 0.055 (3) | |
H3 | 0.587619 | 0.971936 | 0.344310 | 0.067* | |
C4 | 0.6029 (13) | 0.7660 (10) | 0.3421 (3) | 0.053 (3) | |
H4 | 0.701972 | 0.774736 | 0.339075 | 0.064* | |
C5 | 0.5684 (13) | 0.7023 (10) | 0.3837 (3) | 0.053 (2) | |
H5 | 0.468940 | 0.698638 | 0.386460 | 0.063* | |
C6 | 0.6231 (10) | 0.5655 (10) | 0.3885 (3) | 0.047 (2) | |
H6A | 0.592268 | 0.527018 | 0.415221 | 0.056* | |
H6B | 0.590666 | 0.509275 | 0.365389 | 0.056* | |
C7 | 0.6830 (14) | 0.8585 (12) | 0.2349 (3) | 0.064 (3) | |
C8 | 0.8334 (18) | 0.850 (2) | 0.2300 (6) | 0.110 (6) | |
H8A | 0.855493 | 0.777777 | 0.210871 | 0.166* | |
H8B | 0.874231 | 0.832793 | 0.257338 | 0.166* | |
H8C | 0.867575 | 0.932418 | 0.218739 | 0.166* | |
C9 | 0.613 (2) | 0.9036 (15) | 0.1955 (4) | 0.094 (5) | |
H9A | 0.641165 | 0.993113 | 0.188667 | 0.141* | |
H9B | 0.515871 | 0.902173 | 0.199947 | 0.141* | |
H9C | 0.635774 | 0.844726 | 0.172374 | 0.141* | |
C10 | 0.3419 (15) | 1.0193 (11) | 0.3553 (4) | 0.065 (3) | |
H10A | 0.332671 | 1.062316 | 0.327718 | 0.077* | |
H10B | 0.398722 | 1.075298 | 0.373260 | 0.077* | |
C11 | 0.2042 (14) | 1.0014 (11) | 0.3753 (3) | 0.061 (3) | |
C12 | 0.1939 (17) | 1.0081 (14) | 0.4184 (4) | 0.073 (4) | |
H12 | 0.270576 | 1.021812 | 0.435373 | 0.088* | |
C13 | 0.067 (2) | 0.9940 (17) | 0.4362 (5) | 0.103 (6) | |
H13 | 0.056333 | 0.998517 | 0.465700 | 0.123* | |
C14 | −0.043 (2) | 0.9736 (17) | 0.4108 (7) | 0.104 (6) | |
H14 | −0.128897 | 0.965806 | 0.423079 | 0.125* | |
C15 | −0.0304 (19) | 0.9644 (15) | 0.3689 (5) | 0.091 (5) | |
H15 | −0.106376 | 0.948442 | 0.351806 | 0.109* | |
C16 | 0.0966 (17) | 0.9787 (13) | 0.3510 (4) | 0.078 (4) | |
H16 | 0.106929 | 0.972430 | 0.321586 | 0.093* | |
C17 | 0.8331 (11) | 0.4437 (10) | 0.3839 (3) | 0.048 (2) | |
C18 | 0.8224 (12) | 0.3951 (11) | 0.3388 (3) | 0.054 (3) | |
C19 | 0.8348 (13) | 0.2635 (11) | 0.3285 (3) | 0.061 (3) | |
H19 | 0.844259 | 0.200026 | 0.350075 | 0.074* | |
C20 | 0.8336 (15) | 0.2237 (14) | 0.2869 (4) | 0.073 (3) | |
H20 | 0.844730 | 0.133531 | 0.280225 | 0.088* | |
C21 | 0.8166 (15) | 0.3136 (14) | 0.2555 (3) | 0.073 (4) | |
H21 | 0.812525 | 0.285769 | 0.227217 | 0.087* | |
C22 | 0.8054 (14) | 0.4445 (13) | 0.2654 (3) | 0.065 (3) | |
H22 | 0.795842 | 0.507915 | 0.243796 | 0.078* | |
C23 | 0.8081 (12) | 0.4834 (13) | 0.3065 (3) | 0.059 (3) | |
H23 | 0.799835 | 0.574119 | 0.312841 | 0.071* | |
C24 | 0.9853 (12) | 0.4693 (9) | 0.3914 (3) | 0.049 (2) | |
C25 | 1.0686 (12) | 0.3622 (10) | 0.3967 (3) | 0.054 (3) | |
H25 | 1.033200 | 0.275944 | 0.394830 | 0.065* | |
C26 | 1.2063 (13) | 0.3806 (12) | 0.4050 (3) | 0.061 (3) | |
H26 | 1.263470 | 0.307176 | 0.408860 | 0.073* | |
C27 | 1.2568 (14) | 0.5071 (14) | 0.4073 (4) | 0.068 (3) | |
H27 | 1.348633 | 0.520765 | 0.413357 | 0.081* | |
C28 | 1.1724 (15) | 0.6145 (13) | 0.4007 (4) | 0.074 (3) | |
H28 | 1.207834 | 0.701004 | 0.401258 | 0.089* | |
C29 | 1.0347 (13) | 0.5951 (12) | 0.3931 (4) | 0.063 (3) | |
H29 | 0.976890 | 0.668086 | 0.389262 | 0.075* | |
C30 | 0.7800 (13) | 0.3519 (11) | 0.4171 (3) | 0.056 (3) | |
C31 | 0.8290 (14) | 0.3567 (11) | 0.4578 (3) | 0.062 (3) | |
H31 | 0.899595 | 0.415396 | 0.464453 | 0.074* | |
C32 | 0.7762 (16) | 0.2769 (14) | 0.4887 (3) | 0.073 (4) | |
H32 | 0.812262 | 0.281411 | 0.516140 | 0.088* | |
C33 | 0.6711 (16) | 0.1897 (14) | 0.4807 (4) | 0.078 (4) | |
H33 | 0.636079 | 0.134670 | 0.501964 | 0.093* | |
C34 | 0.6204 (16) | 0.1868 (14) | 0.4406 (4) | 0.075 (4) | |
H34 | 0.548702 | 0.128922 | 0.434386 | 0.090* | |
C35 | 0.6703 (13) | 0.2649 (11) | 0.4096 (3) | 0.062 (3) | |
H35 | 0.631387 | 0.261348 | 0.382575 | 0.075* | |
C36 | 0.7142 (14) | 0.763 (2) | 0.4884 (5) | 0.115 (7) | |
H36A | 0.696895 | 0.766101 | 0.518575 | 0.173* | |
H36B | 0.777068 | 0.833003 | 0.480916 | 0.173* | |
H36C | 0.752616 | 0.677798 | 0.481073 | 0.173* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
S1 | 0.0813 (18) | 0.0600 (15) | 0.0316 (11) | −0.0056 (14) | 0.0007 (12) | −0.0015 (10) |
O1 | 0.084 (5) | 0.053 (4) | 0.033 (3) | 0.001 (4) | 0.000 (3) | 0.001 (3) |
O2 | 0.100 (6) | 0.057 (4) | 0.044 (4) | 0.005 (4) | 0.019 (4) | 0.002 (3) |
O3 | 0.087 (6) | 0.060 (4) | 0.050 (4) | −0.006 (4) | 0.024 (4) | 0.004 (3) |
O4 | 0.077 (5) | 0.047 (4) | 0.041 (3) | 0.004 (4) | 0.007 (3) | 0.002 (3) |
O5 | 0.052 (4) | 0.052 (4) | 0.042 (3) | 0.004 (3) | −0.001 (3) | 0.001 (3) |
O6 | 0.094 (6) | 0.063 (4) | 0.031 (3) | −0.007 (4) | 0.000 (3) | 0.003 (3) |
O7 | 0.097 (6) | 0.061 (4) | 0.046 (4) | −0.024 (4) | 0.012 (4) | 0.002 (3) |
O8 | 0.145 (10) | 0.067 (5) | 0.072 (6) | 0.009 (6) | 0.041 (6) | −0.010 (4) |
C1 | 0.090 (8) | 0.055 (6) | 0.032 (4) | −0.001 (6) | −0.007 (5) | 0.002 (4) |
C2 | 0.082 (8) | 0.063 (6) | 0.029 (4) | 0.000 (6) | 0.004 (5) | 0.006 (4) |
C3 | 0.082 (8) | 0.052 (6) | 0.032 (4) | −0.002 (6) | 0.011 (5) | 0.000 (4) |
C4 | 0.077 (7) | 0.052 (6) | 0.031 (4) | 0.003 (5) | −0.001 (4) | 0.005 (4) |
C5 | 0.078 (7) | 0.048 (5) | 0.032 (4) | 0.015 (5) | −0.003 (5) | 0.002 (4) |
C6 | 0.048 (5) | 0.057 (6) | 0.036 (4) | −0.002 (4) | 0.005 (4) | 0.006 (4) |
C7 | 0.078 (8) | 0.069 (7) | 0.044 (5) | 0.006 (6) | 0.023 (5) | 0.005 (5) |
C8 | 0.095 (12) | 0.132 (15) | 0.104 (12) | 0.016 (12) | 0.041 (10) | −0.009 (11) |
C9 | 0.149 (15) | 0.087 (10) | 0.047 (6) | 0.030 (10) | 0.023 (8) | 0.012 (6) |
C10 | 0.094 (9) | 0.045 (6) | 0.055 (6) | 0.003 (6) | 0.003 (6) | −0.004 (5) |
C11 | 0.087 (9) | 0.051 (6) | 0.044 (5) | 0.010 (6) | 0.019 (6) | 0.000 (5) |
C12 | 0.097 (10) | 0.071 (8) | 0.053 (6) | 0.012 (7) | 0.012 (7) | 0.003 (6) |
C13 | 0.145 (17) | 0.094 (11) | 0.069 (8) | 0.038 (12) | 0.053 (11) | 0.025 (8) |
C14 | 0.097 (13) | 0.088 (11) | 0.127 (14) | 0.010 (10) | 0.055 (12) | 0.030 (10) |
C15 | 0.101 (12) | 0.070 (9) | 0.102 (11) | −0.003 (8) | 0.024 (10) | 0.008 (8) |
C16 | 0.113 (12) | 0.068 (8) | 0.052 (6) | 0.019 (8) | −0.003 (7) | −0.004 (6) |
C17 | 0.060 (6) | 0.049 (5) | 0.035 (4) | 0.003 (5) | −0.009 (4) | 0.004 (4) |
C18 | 0.068 (7) | 0.060 (6) | 0.033 (4) | −0.007 (5) | −0.001 (4) | −0.001 (4) |
C19 | 0.081 (8) | 0.058 (7) | 0.044 (5) | −0.007 (6) | −0.003 (5) | 0.001 (5) |
C20 | 0.096 (10) | 0.069 (7) | 0.054 (6) | −0.005 (7) | −0.004 (6) | −0.020 (6) |
C21 | 0.084 (9) | 0.095 (10) | 0.039 (5) | 0.001 (8) | −0.008 (6) | −0.011 (6) |
C22 | 0.078 (8) | 0.079 (8) | 0.038 (5) | 0.019 (7) | −0.006 (5) | −0.002 (5) |
C23 | 0.067 (7) | 0.070 (7) | 0.040 (5) | 0.008 (6) | 0.007 (5) | 0.003 (5) |
C24 | 0.070 (7) | 0.045 (5) | 0.031 (4) | −0.005 (5) | 0.005 (4) | 0.006 (4) |
C25 | 0.076 (7) | 0.048 (5) | 0.039 (5) | −0.005 (5) | −0.009 (5) | 0.005 (4) |
C26 | 0.078 (8) | 0.069 (7) | 0.037 (5) | −0.001 (6) | −0.009 (5) | 0.003 (5) |
C27 | 0.069 (8) | 0.082 (8) | 0.053 (6) | −0.009 (7) | −0.010 (6) | 0.002 (6) |
C28 | 0.085 (9) | 0.060 (7) | 0.076 (8) | −0.011 (7) | −0.011 (7) | −0.002 (6) |
C29 | 0.069 (7) | 0.057 (6) | 0.063 (7) | −0.007 (6) | −0.011 (6) | 0.000 (5) |
C30 | 0.083 (8) | 0.049 (6) | 0.036 (5) | 0.003 (5) | 0.001 (5) | −0.002 (4) |
C31 | 0.086 (8) | 0.059 (6) | 0.040 (5) | −0.005 (6) | −0.001 (5) | 0.004 (5) |
C32 | 0.102 (10) | 0.083 (8) | 0.035 (5) | −0.010 (8) | 0.002 (6) | 0.004 (5) |
C33 | 0.101 (11) | 0.084 (9) | 0.048 (6) | −0.022 (8) | 0.010 (6) | 0.008 (6) |
C34 | 0.092 (10) | 0.076 (8) | 0.055 (6) | −0.011 (7) | −0.008 (6) | 0.011 (6) |
C35 | 0.080 (8) | 0.058 (6) | 0.050 (5) | −0.016 (6) | −0.018 (5) | 0.010 (5) |
C36 | 0.055 (8) | 0.22 (2) | 0.075 (9) | −0.033 (11) | −0.040 (7) | 0.051 (12) |
Geometric parameters (Å, º) top
S1—O8 | 1.416 (10) | C14—C15 | 1.35 (2) |
S1—O7 | 1.438 (8) | C14—H14 | 0.9500 |
S1—O6 | 1.587 (7) | C15—C16 | 1.40 (2) |
S1—C36 | 1.726 (12) | C15—H15 | 0.9500 |
O1—C1 | 1.394 (11) | C16—H16 | 0.9500 |
O1—C4 | 1.429 (12) | C17—C30 | 1.512 (14) |
O2—C1 | 1.392 (14) | C17—C18 | 1.528 (13) |
O2—C7 | 1.415 (14) | C17—C24 | 1.564 (16) |
O3—C7 | 1.419 (13) | C18—C23 | 1.378 (15) |
O3—C2 | 1.423 (14) | C18—C19 | 1.386 (16) |
O4—C10 | 1.441 (13) | C19—C20 | 1.393 (15) |
O4—C3 | 1.441 (14) | C19—H19 | 0.9500 |
O5—C17 | 1.452 (12) | C20—C21 | 1.370 (18) |
O5—C6 | 1.477 (12) | C20—H20 | 0.9500 |
O6—C5 | 1.457 (12) | C21—C22 | 1.375 (18) |
C1—C2 | 1.533 (16) | C21—H21 | 0.9500 |
C1—H1 | 1.0000 | C22—C23 | 1.375 (14) |
C2—C3 | 1.533 (12) | C22—H22 | 0.9500 |
C2—H2 | 1.0000 | C23—H23 | 0.9500 |
C3—C4 | 1.515 (15) | C24—C29 | 1.375 (15) |
C3—H3 | 1.0000 | C24—C25 | 1.383 (15) |
C4—C5 | 1.521 (12) | C25—C26 | 1.416 (17) |
C4—H4 | 1.0000 | C25—H25 | 0.9500 |
C5—C6 | 1.506 (14) | C26—C27 | 1.386 (18) |
C5—H5 | 1.0000 | C26—H26 | 0.9500 |
C6—H6A | 0.9900 | C27—C28 | 1.40 (2) |
C6—H6B | 0.9900 | C27—H27 | 0.9500 |
C7—C8 | 1.52 (2) | C28—C29 | 1.413 (19) |
C7—C9 | 1.515 (19) | C28—H28 | 0.9500 |
C8—H8A | 0.9800 | C29—H29 | 0.9500 |
C8—H8B | 0.9800 | C30—C31 | 1.394 (15) |
C8—H8C | 0.9800 | C30—C35 | 1.431 (16) |
C9—H9A | 0.9800 | C31—C32 | 1.386 (16) |
C9—H9B | 0.9800 | C31—H31 | 0.9500 |
C9—H9C | 0.9800 | C32—C33 | 1.401 (19) |
C10—C11 | 1.530 (18) | C32—H32 | 0.9500 |
C10—H10A | 0.9900 | C33—C34 | 1.379 (17) |
C10—H10B | 0.9900 | C33—H33 | 0.9500 |
C11—C16 | 1.35 (2) | C34—C35 | 1.366 (17) |
C11—C12 | 1.385 (15) | C34—H34 | 0.9500 |
C12—C13 | 1.40 (2) | C35—H35 | 0.9500 |
C12—H12 | 0.9500 | C36—H36A | 0.9800 |
C13—C14 | 1.38 (3) | C36—H36B | 0.9800 |
C13—H13 | 0.9500 | C36—H36C | 0.9800 |
| | | |
O8—S1—O7 | 117.5 (6) | C14—C13—C12 | 119.8 (14) |
O8—S1—O6 | 106.9 (5) | C14—C13—H13 | 120.1 |
O7—S1—O6 | 109.3 (4) | C12—C13—H13 | 120.1 |
O8—S1—C36 | 110.3 (10) | C15—C14—C13 | 121.5 (16) |
O7—S1—C36 | 110.9 (8) | C15—C14—H14 | 119.3 |
O6—S1—C36 | 100.4 (7) | C13—C14—H14 | 119.3 |
C1—O1—C4 | 109.3 (8) | C14—C15—C16 | 118.8 (18) |
C1—O2—C7 | 109.2 (8) | C14—C15—H15 | 120.6 |
C7—O3—C2 | 105.6 (9) | C16—C15—H15 | 120.6 |
C10—O4—C3 | 113.5 (8) | C11—C16—C15 | 120.5 (13) |
C17—O5—C6 | 113.2 (8) | C11—C16—H16 | 119.8 |
C5—O6—S1 | 119.7 (7) | C15—C16—H16 | 119.8 |
O2—C1—O1 | 111.2 (10) | O5—C17—C30 | 110.0 (8) |
O2—C1—C2 | 104.8 (9) | O5—C17—C18 | 110.0 (8) |
O1—C1—C2 | 107.4 (8) | C30—C17—C18 | 116.0 (9) |
O2—C1—H1 | 111.1 | O5—C17—C24 | 104.9 (8) |
O1—C1—H1 | 111.1 | C30—C17—C24 | 109.8 (8) |
C2—C1—H1 | 111.1 | C18—C17—C24 | 105.5 (8) |
O3—C2—C3 | 108.8 (9) | C23—C18—C19 | 117.6 (9) |
O3—C2—C1 | 103.7 (10) | C23—C18—C17 | 120.3 (10) |
C3—C2—C1 | 103.7 (8) | C19—C18—C17 | 122.0 (9) |
O3—C2—H2 | 113.3 | C18—C19—C20 | 120.5 (11) |
C3—C2—H2 | 113.3 | C18—C19—H19 | 119.7 |
C1—C2—H2 | 113.3 | C20—C19—H19 | 119.7 |
O4—C3—C4 | 108.5 (9) | C21—C20—C19 | 120.5 (12) |
O4—C3—C2 | 110.2 (10) | C21—C20—H20 | 119.7 |
C4—C3—C2 | 101.5 (8) | C19—C20—H20 | 119.7 |
O4—C3—H3 | 112.0 | C20—C21—C22 | 119.4 (10) |
C4—C3—H3 | 112.0 | C20—C21—H21 | 120.3 |
C2—C3—H3 | 112.0 | C22—C21—H21 | 120.3 |
O1—C4—C3 | 104.4 (8) | C23—C22—C21 | 119.8 (11) |
O1—C4—C5 | 105.3 (8) | C23—C22—H22 | 120.1 |
C3—C4—C5 | 115.7 (9) | C21—C22—H22 | 120.1 |
O1—C4—H4 | 110.4 | C22—C23—C18 | 122.2 (11) |
C3—C4—H4 | 110.4 | C22—C23—H23 | 118.9 |
C5—C4—H4 | 110.4 | C18—C23—H23 | 118.9 |
O6—C5—C6 | 112.7 (8) | C29—C24—C25 | 120.9 (11) |
O6—C5—C4 | 104.7 (8) | C29—C24—C17 | 120.8 (10) |
C6—C5—C4 | 113.6 (8) | C25—C24—C17 | 118.3 (9) |
O6—C5—H5 | 108.6 | C24—C25—C26 | 120.4 (10) |
C6—C5—H5 | 108.6 | C24—C25—H25 | 119.8 |
C4—C5—H5 | 108.6 | C26—C25—H25 | 119.8 |
O5—C6—C5 | 108.8 (9) | C27—C26—C25 | 119.2 (12) |
O5—C6—H6A | 109.9 | C27—C26—H26 | 120.4 |
C5—C6—H6A | 109.9 | C25—C26—H26 | 120.4 |
O5—C6—H6B | 109.9 | C26—C27—C28 | 120.0 (13) |
C5—C6—H6B | 109.9 | C26—C27—H27 | 120.0 |
H6A—C6—H6B | 108.3 | C28—C27—H27 | 120.0 |
O2—C7—O3 | 104.9 (8) | C27—C28—C29 | 120.3 (12) |
O2—C7—C8 | 108.9 (12) | C27—C28—H28 | 119.8 |
O3—C7—C8 | 108.6 (12) | C29—C28—H28 | 119.8 |
O2—C7—C9 | 108.7 (12) | C24—C29—C28 | 119.2 (12) |
O3—C7—C9 | 112.1 (10) | C24—C29—H29 | 120.4 |
C8—C7—C9 | 113.2 (12) | C28—C29—H29 | 120.4 |
C7—C8—H8A | 109.5 | C31—C30—C35 | 116.5 (10) |
C7—C8—H8B | 109.5 | C31—C30—C17 | 120.8 (11) |
H8A—C8—H8B | 109.5 | C35—C30—C17 | 122.4 (9) |
C7—C8—H8C | 109.5 | C32—C31—C30 | 120.9 (12) |
H8A—C8—H8C | 109.5 | C32—C31—H31 | 119.5 |
H8B—C8—H8C | 109.5 | C30—C31—H31 | 119.5 |
C7—C9—H9A | 109.5 | C31—C32—C33 | 121.8 (11) |
C7—C9—H9B | 109.5 | C31—C32—H32 | 119.1 |
H9A—C9—H9B | 109.5 | C33—C32—H32 | 119.1 |
C7—C9—H9C | 109.5 | C34—C33—C32 | 117.5 (11) |
H9A—C9—H9C | 109.5 | C34—C33—H33 | 121.3 |
H9B—C9—H9C | 109.5 | C32—C33—H33 | 121.3 |
O4—C10—C11 | 108.3 (9) | C35—C34—C33 | 121.9 (13) |
O4—C10—H10A | 110.0 | C35—C34—H34 | 119.1 |
C11—C10—H10A | 110.0 | C33—C34—H34 | 119.1 |
O4—C10—H10B | 110.0 | C34—C35—C30 | 121.4 (11) |
C11—C10—H10B | 110.0 | C34—C35—H35 | 119.3 |
H10A—C10—H10B | 108.4 | C30—C35—H35 | 119.3 |
C16—C11—C12 | 121.6 (13) | S1—C36—H36A | 109.5 |
C16—C11—C10 | 119.8 (10) | S1—C36—H36B | 109.5 |
C12—C11—C10 | 118.6 (13) | H36A—C36—H36B | 109.5 |
C11—C12—C13 | 117.9 (16) | S1—C36—H36C | 109.5 |
C11—C12—H12 | 121.0 | H36A—C36—H36C | 109.5 |
C13—C12—H12 | 121.0 | H36B—C36—H36C | 109.5 |
| | | |
O8—S1—O6—C5 | −121.0 (9) | C12—C11—C16—C15 | 2 (2) |
O7—S1—O6—C5 | 7.2 (10) | C10—C11—C16—C15 | −178.9 (12) |
C36—S1—O6—C5 | 123.9 (11) | C14—C15—C16—C11 | 0 (2) |
C7—O2—C1—O1 | −124.4 (10) | C6—O5—C17—C30 | −52.7 (10) |
C7—O2—C1—C2 | −8.6 (12) | C6—O5—C17—C18 | 76.3 (10) |
C4—O1—C1—O2 | 98.3 (10) | C6—O5—C17—C24 | −170.7 (7) |
C4—O1—C1—C2 | −15.9 (13) | O5—C17—C18—C23 | 24.5 (15) |
C7—O3—C2—C3 | 139.1 (9) | C30—C17—C18—C23 | 150.2 (11) |
C7—O3—C2—C1 | 29.2 (10) | C24—C17—C18—C23 | −88.1 (12) |
O2—C1—C2—O3 | −12.7 (10) | O5—C17—C18—C19 | −159.6 (11) |
O1—C1—C2—O3 | 105.7 (10) | C30—C17—C18—C19 | −33.9 (16) |
O2—C1—C2—C3 | −126.4 (9) | C24—C17—C18—C19 | 87.8 (13) |
O1—C1—C2—C3 | −7.9 (14) | C23—C18—C19—C20 | 0 (2) |
C10—O4—C3—C4 | 162.6 (8) | C17—C18—C19—C20 | −175.6 (12) |
C10—O4—C3—C2 | −87.1 (11) | C18—C19—C20—C21 | −2 (2) |
O3—C2—C3—O4 | 161.9 (8) | C19—C20—C21—C22 | 2 (2) |
C1—C2—C3—O4 | −88.1 (11) | C20—C21—C22—C23 | −2 (2) |
O3—C2—C3—C4 | −83.3 (11) | C21—C22—C23—C18 | 0 (2) |
C1—C2—C3—C4 | 26.6 (12) | C19—C18—C23—C22 | 0.3 (19) |
C1—O1—C4—C3 | 33.7 (12) | C17—C18—C23—C22 | 176.4 (12) |
C1—O1—C4—C5 | 156.0 (9) | O5—C17—C24—C29 | −10.1 (12) |
O4—C3—C4—O1 | 79.5 (9) | C30—C17—C24—C29 | −128.3 (10) |
C2—C3—C4—O1 | −36.6 (11) | C18—C17—C24—C29 | 106.0 (11) |
O4—C3—C4—C5 | −35.7 (12) | O5—C17—C24—C25 | 169.0 (8) |
C2—C3—C4—C5 | −151.8 (10) | C30—C17—C24—C25 | 50.9 (11) |
S1—O6—C5—C6 | −75.2 (11) | C18—C17—C24—C25 | −74.8 (10) |
S1—O6—C5—C4 | 160.9 (8) | C29—C24—C25—C26 | 1.3 (15) |
O1—C4—C5—O6 | −179.3 (9) | C17—C24—C25—C26 | −177.9 (9) |
C3—C4—C5—O6 | −64.6 (12) | C24—C25—C26—C27 | −0.5 (15) |
O1—C4—C5—C6 | 57.4 (12) | C25—C26—C27—C28 | −1.3 (17) |
C3—C4—C5—C6 | 172.1 (9) | C26—C27—C28—C29 | 2.3 (19) |
C17—O5—C6—C5 | −168.5 (7) | C25—C24—C29—C28 | −0.3 (17) |
O6—C5—C6—O5 | −55.3 (11) | C17—C24—C29—C28 | 178.9 (10) |
C4—C5—C6—O5 | 63.5 (11) | C27—C28—C29—C24 | −1.5 (19) |
C1—O2—C7—O3 | 27.1 (13) | O5—C17—C30—C31 | −80.3 (13) |
C1—O2—C7—C8 | 143.2 (11) | C18—C17—C30—C31 | 154.0 (11) |
C1—O2—C7—C9 | −93.0 (11) | C24—C17—C30—C31 | 34.7 (14) |
C2—O3—C7—O2 | −35.1 (12) | O5—C17—C30—C35 | 94.1 (12) |
C2—O3—C7—C8 | −151.5 (12) | C18—C17—C30—C35 | −31.6 (16) |
C2—O3—C7—C9 | 82.7 (13) | C24—C17—C30—C35 | −151.0 (11) |
C3—O4—C10—C11 | −177.7 (9) | C35—C30—C31—C32 | 2.3 (19) |
O4—C10—C11—C16 | −87.3 (13) | C17—C30—C31—C32 | 177.0 (12) |
O4—C10—C11—C12 | 92.2 (13) | C30—C31—C32—C33 | −1 (2) |
C16—C11—C12—C13 | −2 (2) | C31—C32—C33—C34 | −1 (2) |
C10—C11—C12—C13 | 178.8 (12) | C32—C33—C34—C35 | 0 (2) |
C11—C12—C13—C14 | 0 (2) | C33—C34—C35—C30 | 1 (2) |
C12—C13—C14—C15 | 1 (3) | C31—C30—C35—C34 | −2.6 (19) |
C13—C14—C15—C16 | −1 (3) | C17—C30—C35—C34 | −177.2 (12) |
Hydrogen-bond geometry (Å, º) topCg3 is the centroid of the C11–C16 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C34—H34···O8i | 0.95 | 2.55 | 3.179 (17) | 124 |
C25—H25···Cg3ii | 0.95 | 2.99 | 3.830 (12) | 149 |
Symmetry codes: (i) x, y−1, z; (ii) x+1, y−1, z. |
\
(3a
R,5
S,6
S,6a
R)-5-[1-Azido-2-(trityloxy)ethyl]-6-\
benzyloxy-2,2-dimethyltetrahydrofuro[2,3-
d][1,3]dioxole (4)
top
Crystal data top
C35H35N3O5 | Dx = 1.259 Mg m−3 |
Mr = 577.66 | Cu Kα radiation, λ = 1.54178 Å |
Orthorhombic, P212121 | Cell parameters from 46634 reflections |
a = 10.0943 (1) Å | θ = 4.3–76.0° |
b = 10.9625 (1) Å | µ = 0.68 mm−1 |
c = 27.5392 (2) Å | T = 150 K |
V = 3047.45 (5) Å3 | Prismatic fragment, colourless |
Z = 4 | 0.26 × 0.15 × 0.13 mm |
F(000) = 1224 | |
Data collection top
Agilent SuperNova, Dual, Cu at zero, Atlas diffractometer | 6389 independent reflections |
Radiation source: SuperNova (Cu) X-ray Source | 6282 reflections with I > 2σ(I) |
Mirror monochromator | Rint = 0.038 |
Detector resolution: 10.5861 pixels mm-1 | θmax = 76.5°, θmin = 3.2° |
ω scans | h = −12→12 |
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2015) | k = −13→13 |
Tmin = 0.676, Tmax = 1.000 | l = −33→34 |
73112 measured reflections | |
Refinement top
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.029 | w = 1/[σ2(Fo2) + (0.0636P)2 + 0.2613P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.085 | (Δ/σ)max < 0.001 |
S = 1.03 | Δρmax = 0.39 e Å−3 |
6389 reflections | Δρmin = −0.18 e Å−3 |
391 parameters | Extinction correction: (SHELXL2018; Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
0 restraints | Extinction coefficient: 0.0007 (2) |
Primary atom site location: structure-invariant direct methods | Absolute structure: Flack x determined using 2717 quotients
[(I+)-(I-)]/[(I+)+(I-)]
(Parsons et al., 2013) |
Secondary atom site location: difference Fourier map | Absolute structure parameter: −0.02 (3) |
Special details top
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell esds are taken
into account individually in the estimation of esds in distances, angles
and torsion angles; correlations between esds in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell esds is used for estimating esds involving l.s. planes. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
O1 | 0.18408 (10) | 0.60187 (9) | 0.10645 (4) | 0.0270 (2) | |
O2 | 0.00591 (11) | 0.70764 (11) | 0.13994 (4) | 0.0328 (3) | |
O3 | −0.13375 (11) | 0.56706 (10) | 0.10832 (4) | 0.0296 (2) | |
O4 | 0.10606 (11) | 0.44527 (11) | 0.02350 (4) | 0.0291 (2) | |
O5 | 0.15534 (10) | 0.23286 (9) | 0.13663 (4) | 0.0246 (2) | |
N1 | 0.35781 (13) | 0.41981 (12) | 0.14726 (5) | 0.0300 (3) | |
N2 | 0.43200 (15) | 0.50814 (14) | 0.14439 (5) | 0.0354 (3) | |
N3 | 0.5025 (2) | 0.58666 (18) | 0.14562 (9) | 0.0598 (5) | |
C1 | 0.06810 (15) | 0.66879 (13) | 0.09676 (6) | 0.0268 (3) | |
H1 | 0.086933 | 0.739408 | 0.074834 | 0.032* | |
C2 | −0.03197 (15) | 0.58033 (13) | 0.07341 (5) | 0.0261 (3) | |
H2 | −0.065704 | 0.610124 | 0.041393 | 0.031* | |
C3 | 0.04319 (15) | 0.45956 (13) | 0.06926 (5) | 0.0248 (3) | |
H4 | −0.016245 | 0.388852 | 0.076452 | 0.030* | |
C4 | 0.14788 (14) | 0.47460 (12) | 0.10874 (5) | 0.0236 (3) | |
H5 | 0.106924 | 0.457226 | 0.141073 | 0.028* | |
C5 | 0.27373 (14) | 0.39970 (13) | 0.10348 (5) | 0.0246 (3) | |
H6 | 0.323017 | 0.427614 | 0.074010 | 0.030* | |
C6 | 0.24742 (14) | 0.26381 (13) | 0.09944 (5) | 0.0255 (3) | |
H6A | 0.210161 | 0.244124 | 0.067120 | 0.031* | |
H6B | 0.330759 | 0.217442 | 0.103720 | 0.031* | |
C7 | −0.13035 (16) | 0.67123 (14) | 0.13941 (6) | 0.0284 (3) | |
C8 | −0.16999 (18) | 0.6312 (2) | 0.18961 (6) | 0.0403 (4) | |
H8A | −0.261046 | 0.600252 | 0.188955 | 0.060* | |
H8B | −0.164574 | 0.700762 | 0.211883 | 0.060* | |
H8C | −0.110156 | 0.566556 | 0.200704 | 0.060* | |
C9 | −0.21657 (19) | 0.77199 (16) | 0.11883 (7) | 0.0397 (4) | |
H9A | −0.186880 | 0.791990 | 0.085902 | 0.060* | |
H9B | −0.209628 | 0.844528 | 0.139474 | 0.060* | |
H9C | −0.308936 | 0.744573 | 0.117824 | 0.060* | |
C10 | 0.01360 (17) | 0.42805 (18) | −0.01546 (6) | 0.0383 (4) | |
H10A | −0.012860 | 0.508124 | −0.028962 | 0.046* | |
H10B | −0.066870 | 0.386567 | −0.003230 | 0.046* | |
C11 | 0.07737 (15) | 0.35211 (16) | −0.05432 (6) | 0.0302 (3) | |
C12 | 0.11051 (18) | 0.23157 (16) | −0.04514 (6) | 0.0354 (4) | |
H12 | 0.093305 | 0.197681 | −0.014029 | 0.042* | |
C13 | 0.16831 (19) | 0.15995 (16) | −0.08068 (7) | 0.0382 (4) | |
H13 | 0.190812 | 0.077529 | −0.073932 | 0.046* | |
C14 | 0.19326 (18) | 0.20894 (18) | −0.12618 (6) | 0.0374 (4) | |
H14 | 0.233078 | 0.159988 | −0.150614 | 0.045* | |
C15 | 0.16047 (17) | 0.32848 (18) | −0.13608 (6) | 0.0370 (4) | |
H15 | 0.177332 | 0.361637 | −0.167347 | 0.044* | |
C16 | 0.10255 (16) | 0.40072 (16) | −0.10021 (6) | 0.0338 (3) | |
H16 | 0.080218 | 0.483138 | −0.107031 | 0.041* | |
C17 | 0.13412 (14) | 0.10522 (12) | 0.14551 (5) | 0.0221 (3) | |
C18 | 0.25661 (14) | 0.04939 (14) | 0.17016 (5) | 0.0247 (3) | |
C19 | 0.33940 (15) | 0.12422 (15) | 0.19749 (5) | 0.0295 (3) | |
H19 | 0.323232 | 0.209544 | 0.198606 | 0.035* | |
C20 | 0.44561 (17) | 0.07539 (18) | 0.22319 (6) | 0.0380 (4) | |
H20 | 0.501120 | 0.127678 | 0.241697 | 0.046* | |
C21 | 0.47113 (18) | −0.04860 (19) | 0.22204 (7) | 0.0425 (4) | |
H21 | 0.543924 | −0.081546 | 0.239532 | 0.051* | |
C22 | 0.38886 (18) | −0.12450 (17) | 0.19494 (7) | 0.0393 (4) | |
H22 | 0.405765 | −0.209706 | 0.193810 | 0.047* | |
C23 | 0.28199 (16) | −0.07606 (15) | 0.16951 (6) | 0.0305 (3) | |
H23 | 0.225656 | −0.128736 | 0.151509 | 0.037* | |
C24 | 0.09417 (14) | 0.04392 (13) | 0.09745 (5) | 0.0239 (3) | |
C25 | 0.18732 (16) | −0.01114 (14) | 0.06702 (5) | 0.0280 (3) | |
H25 | 0.277293 | −0.015847 | 0.076968 | 0.034* | |
C26 | 0.14980 (18) | −0.05930 (15) | 0.02220 (6) | 0.0332 (3) | |
H26 | 0.214126 | −0.096942 | 0.001967 | 0.040* | |
C27 | 0.0192 (2) | −0.05246 (16) | 0.00708 (6) | 0.0359 (4) | |
H27 | −0.006660 | −0.087082 | −0.023088 | 0.043* | |
C28 | −0.07333 (17) | 0.00507 (18) | 0.03617 (6) | 0.0358 (4) | |
H28 | −0.162552 | 0.011971 | 0.025543 | 0.043* | |
C29 | −0.03610 (16) | 0.05300 (15) | 0.08105 (6) | 0.0301 (3) | |
H29 | −0.100456 | 0.092409 | 0.100731 | 0.036* | |
C30 | 0.02126 (14) | 0.10232 (13) | 0.18324 (5) | 0.0231 (3) | |
C31 | −0.02863 (15) | 0.20958 (14) | 0.20323 (5) | 0.0260 (3) | |
H31 | 0.003067 | 0.286132 | 0.191984 | 0.031* | |
C32 | −0.12446 (16) | 0.20572 (15) | 0.23951 (6) | 0.0298 (3) | |
H32 | −0.157422 | 0.279573 | 0.252919 | 0.036* | |
C33 | −0.17216 (15) | 0.09483 (16) | 0.25623 (5) | 0.0298 (3) | |
H33 | −0.236550 | 0.092243 | 0.281369 | 0.036* | |
C34 | −0.12473 (16) | −0.01243 (15) | 0.23581 (6) | 0.0293 (3) | |
H34 | −0.158170 | −0.088721 | 0.246647 | 0.035* | |
C35 | −0.02869 (15) | −0.00910 (14) | 0.19965 (5) | 0.0272 (3) | |
H35 | 0.003151 | −0.083097 | 0.186006 | 0.033* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
O1 | 0.0230 (5) | 0.0237 (5) | 0.0343 (5) | −0.0036 (4) | −0.0021 (4) | 0.0010 (4) |
O2 | 0.0263 (5) | 0.0339 (6) | 0.0380 (6) | −0.0031 (5) | −0.0022 (4) | −0.0108 (5) |
O3 | 0.0262 (5) | 0.0293 (5) | 0.0332 (6) | −0.0044 (4) | 0.0042 (4) | −0.0081 (4) |
O4 | 0.0251 (5) | 0.0395 (6) | 0.0228 (5) | 0.0016 (5) | −0.0013 (4) | −0.0039 (4) |
O5 | 0.0245 (5) | 0.0235 (5) | 0.0259 (5) | 0.0000 (4) | 0.0055 (4) | 0.0011 (4) |
N1 | 0.0248 (6) | 0.0338 (7) | 0.0314 (7) | −0.0023 (5) | −0.0049 (5) | 0.0024 (5) |
N2 | 0.0290 (7) | 0.0374 (7) | 0.0398 (7) | −0.0013 (6) | −0.0027 (6) | −0.0040 (6) |
N3 | 0.0427 (9) | 0.0518 (10) | 0.0849 (15) | −0.0151 (9) | −0.0110 (9) | −0.0058 (10) |
C1 | 0.0260 (7) | 0.0247 (6) | 0.0297 (7) | −0.0020 (5) | −0.0027 (6) | 0.0021 (5) |
C2 | 0.0232 (6) | 0.0294 (7) | 0.0257 (7) | −0.0013 (5) | −0.0015 (5) | −0.0013 (5) |
C3 | 0.0229 (6) | 0.0273 (6) | 0.0240 (7) | −0.0017 (5) | 0.0002 (5) | −0.0024 (5) |
C4 | 0.0233 (6) | 0.0233 (6) | 0.0242 (6) | −0.0030 (5) | 0.0000 (5) | 0.0006 (5) |
C5 | 0.0227 (6) | 0.0277 (7) | 0.0234 (6) | −0.0022 (5) | 0.0009 (5) | 0.0017 (5) |
C6 | 0.0244 (7) | 0.0271 (7) | 0.0250 (6) | −0.0003 (5) | 0.0048 (5) | 0.0016 (5) |
C7 | 0.0255 (7) | 0.0280 (7) | 0.0317 (7) | −0.0006 (6) | −0.0017 (6) | −0.0057 (6) |
C8 | 0.0345 (8) | 0.0554 (10) | 0.0309 (8) | 0.0002 (8) | 0.0004 (7) | −0.0038 (7) |
C9 | 0.0333 (8) | 0.0336 (8) | 0.0522 (10) | 0.0029 (7) | −0.0048 (8) | −0.0029 (7) |
C10 | 0.0307 (8) | 0.0541 (10) | 0.0299 (8) | 0.0096 (8) | −0.0066 (6) | −0.0103 (7) |
C11 | 0.0233 (7) | 0.0414 (8) | 0.0259 (7) | 0.0015 (6) | −0.0049 (5) | −0.0057 (6) |
C12 | 0.0368 (9) | 0.0410 (8) | 0.0284 (7) | −0.0008 (7) | 0.0012 (6) | 0.0025 (6) |
C13 | 0.0395 (9) | 0.0361 (8) | 0.0391 (9) | 0.0010 (7) | 0.0035 (7) | −0.0033 (7) |
C14 | 0.0302 (8) | 0.0480 (10) | 0.0339 (8) | −0.0024 (7) | 0.0030 (6) | −0.0101 (7) |
C15 | 0.0297 (8) | 0.0549 (10) | 0.0263 (7) | −0.0035 (7) | 0.0007 (6) | 0.0039 (7) |
C16 | 0.0277 (7) | 0.0407 (8) | 0.0331 (8) | −0.0002 (6) | −0.0046 (6) | 0.0028 (7) |
C17 | 0.0206 (6) | 0.0234 (6) | 0.0224 (6) | 0.0002 (5) | 0.0020 (5) | 0.0003 (5) |
C18 | 0.0209 (6) | 0.0297 (7) | 0.0234 (6) | 0.0005 (5) | 0.0024 (5) | 0.0030 (5) |
C19 | 0.0260 (7) | 0.0357 (8) | 0.0269 (7) | −0.0015 (6) | −0.0002 (6) | 0.0018 (6) |
C20 | 0.0276 (8) | 0.0522 (10) | 0.0341 (8) | −0.0047 (8) | −0.0062 (6) | 0.0052 (7) |
C21 | 0.0279 (8) | 0.0562 (11) | 0.0433 (9) | 0.0059 (8) | −0.0048 (7) | 0.0146 (8) |
C22 | 0.0319 (8) | 0.0381 (8) | 0.0479 (10) | 0.0069 (7) | 0.0017 (7) | 0.0129 (7) |
C23 | 0.0267 (7) | 0.0297 (7) | 0.0350 (8) | 0.0015 (6) | 0.0015 (6) | 0.0060 (6) |
C24 | 0.0252 (7) | 0.0249 (6) | 0.0217 (6) | −0.0014 (5) | 0.0024 (5) | 0.0017 (5) |
C25 | 0.0287 (7) | 0.0283 (7) | 0.0271 (7) | 0.0005 (6) | 0.0045 (6) | 0.0011 (6) |
C26 | 0.0417 (9) | 0.0307 (7) | 0.0271 (7) | 0.0005 (7) | 0.0084 (6) | 0.0004 (6) |
C27 | 0.0473 (10) | 0.0375 (8) | 0.0230 (7) | −0.0076 (7) | −0.0001 (6) | −0.0003 (6) |
C28 | 0.0323 (8) | 0.0484 (9) | 0.0268 (7) | −0.0053 (7) | −0.0027 (6) | 0.0015 (7) |
C29 | 0.0262 (7) | 0.0394 (8) | 0.0248 (7) | 0.0007 (6) | 0.0007 (6) | 0.0002 (6) |
C30 | 0.0203 (6) | 0.0287 (7) | 0.0201 (6) | −0.0011 (5) | −0.0008 (5) | 0.0003 (5) |
C31 | 0.0253 (7) | 0.0284 (7) | 0.0243 (6) | −0.0007 (6) | 0.0004 (6) | −0.0022 (5) |
C32 | 0.0287 (7) | 0.0357 (8) | 0.0249 (7) | 0.0022 (6) | 0.0016 (6) | −0.0065 (6) |
C33 | 0.0248 (7) | 0.0444 (8) | 0.0201 (6) | −0.0009 (6) | 0.0015 (5) | 0.0004 (6) |
C34 | 0.0257 (7) | 0.0353 (7) | 0.0269 (7) | −0.0044 (6) | 0.0013 (6) | 0.0048 (6) |
C35 | 0.0251 (7) | 0.0287 (7) | 0.0277 (7) | −0.0013 (6) | 0.0022 (6) | 0.0008 (6) |
Geometric parameters (Å, º) top
O1—C1 | 1.4071 (18) | C14—C15 | 1.379 (3) |
O1—C4 | 1.4437 (16) | C14—H14 | 0.9500 |
O2—C1 | 1.4106 (19) | C15—C16 | 1.395 (2) |
O2—C7 | 1.4323 (19) | C15—H15 | 0.9500 |
O3—C2 | 1.4146 (18) | C16—H16 | 0.9500 |
O3—C7 | 1.4276 (17) | C17—C24 | 1.5383 (19) |
O4—C3 | 1.4197 (17) | C17—C18 | 1.5376 (19) |
O4—C10 | 1.4346 (19) | C17—C30 | 1.5422 (19) |
O5—C6 | 1.4241 (17) | C18—C19 | 1.392 (2) |
O5—C17 | 1.4365 (17) | C18—C23 | 1.399 (2) |
N1—N2 | 1.227 (2) | C19—C20 | 1.392 (2) |
N1—C5 | 1.4907 (18) | C19—H19 | 0.9500 |
N2—N3 | 1.118 (2) | C20—C21 | 1.384 (3) |
C1—C2 | 1.541 (2) | C20—H20 | 0.9500 |
C1—H1 | 1.0000 | C21—C22 | 1.392 (3) |
C2—C3 | 1.530 (2) | C21—H21 | 0.9500 |
C2—H2 | 1.0000 | C22—C23 | 1.392 (2) |
C3—C4 | 1.5251 (19) | C22—H22 | 0.9500 |
C3—H4 | 1.0000 | C23—H23 | 0.9500 |
C4—C5 | 1.519 (2) | C24—C29 | 1.394 (2) |
C4—H5 | 1.0000 | C24—C25 | 1.397 (2) |
C5—C6 | 1.517 (2) | C25—C26 | 1.395 (2) |
C5—H6 | 1.0000 | C25—H25 | 0.9500 |
C6—H6A | 0.9900 | C26—C27 | 1.384 (3) |
C6—H6B | 0.9900 | C26—H26 | 0.9500 |
C7—C8 | 1.505 (2) | C27—C28 | 1.383 (3) |
C7—C9 | 1.516 (2) | C27—H27 | 0.9500 |
C8—H8A | 0.9800 | C28—C29 | 1.395 (2) |
C8—H8B | 0.9800 | C28—H28 | 0.9500 |
C8—H8C | 0.9800 | C29—H29 | 0.9500 |
C9—H9A | 0.9800 | C30—C31 | 1.393 (2) |
C9—H9B | 0.9800 | C30—C35 | 1.396 (2) |
C9—H9C | 0.9800 | C31—C32 | 1.391 (2) |
C10—C11 | 1.501 (2) | C31—H31 | 0.9500 |
C10—H10A | 0.9900 | C32—C33 | 1.386 (2) |
C10—H10B | 0.9900 | C32—H32 | 0.9500 |
C11—C12 | 1.386 (2) | C33—C34 | 1.388 (2) |
C11—C16 | 1.395 (2) | C33—H33 | 0.9500 |
C12—C13 | 1.384 (2) | C34—C35 | 1.390 (2) |
C12—H12 | 0.9500 | C34—H34 | 0.9500 |
C13—C14 | 1.386 (3) | C35—H35 | 0.9500 |
C13—H13 | 0.9500 | | |
| | | |
C1—O1—C4 | 107.55 (10) | C12—C13—C14 | 119.74 (17) |
C1—O2—C7 | 109.54 (11) | C12—C13—H13 | 120.1 |
C2—O3—C7 | 107.93 (11) | C14—C13—H13 | 120.1 |
C3—O4—C10 | 112.81 (12) | C15—C14—C13 | 120.23 (17) |
C6—O5—C17 | 116.87 (11) | C15—C14—H14 | 119.9 |
N2—N1—C5 | 114.34 (13) | C13—C14—H14 | 119.9 |
N3—N2—N1 | 174.2 (2) | C14—C15—C16 | 120.01 (16) |
O1—C1—O2 | 111.58 (12) | C14—C15—H15 | 120.0 |
O1—C1—C2 | 107.25 (11) | C16—C15—H15 | 120.0 |
O2—C1—C2 | 104.48 (12) | C15—C16—C11 | 120.08 (16) |
O1—C1—H1 | 111.1 | C15—C16—H16 | 120.0 |
O2—C1—H1 | 111.1 | C11—C16—H16 | 120.0 |
C2—C1—H1 | 111.1 | O5—C17—C24 | 108.54 (11) |
O3—C2—C3 | 108.77 (12) | O5—C17—C18 | 110.07 (11) |
O3—C2—C1 | 104.90 (11) | C24—C17—C18 | 114.63 (12) |
C3—C2—C1 | 104.51 (12) | O5—C17—C30 | 104.18 (11) |
O3—C2—H2 | 112.7 | C24—C17—C30 | 112.15 (11) |
C3—C2—H2 | 112.7 | C18—C17—C30 | 106.76 (11) |
C1—C2—H2 | 112.7 | C19—C18—C23 | 118.44 (14) |
O4—C3—C4 | 109.57 (12) | C19—C18—C17 | 119.13 (13) |
O4—C3—C2 | 112.54 (12) | C23—C18—C17 | 122.20 (13) |
C4—C3—C2 | 101.35 (11) | C18—C19—C20 | 120.71 (16) |
O4—C3—H4 | 111.0 | C18—C19—H19 | 119.6 |
C4—C3—H4 | 111.0 | C20—C19—H19 | 119.6 |
C2—C3—H4 | 111.0 | C21—C20—C19 | 120.64 (17) |
O1—C4—C5 | 107.85 (11) | C21—C20—H20 | 119.7 |
O1—C4—C3 | 104.40 (11) | C19—C20—H20 | 119.7 |
C5—C4—C3 | 116.94 (12) | C20—C21—C22 | 119.22 (17) |
O1—C4—H5 | 109.1 | C20—C21—H21 | 120.4 |
C5—C4—H5 | 109.1 | C22—C21—H21 | 120.4 |
C3—C4—H5 | 109.1 | C23—C22—C21 | 120.27 (17) |
N1—C5—C4 | 108.60 (12) | C23—C22—H22 | 119.9 |
N1—C5—C6 | 107.72 (12) | C21—C22—H22 | 119.9 |
C4—C5—C6 | 113.03 (12) | C22—C23—C18 | 120.71 (16) |
N1—C5—H6 | 109.1 | C22—C23—H23 | 119.6 |
C4—C5—H6 | 109.1 | C18—C23—H23 | 119.6 |
C6—C5—H6 | 109.1 | C29—C24—C25 | 118.14 (14) |
O5—C6—C5 | 107.18 (12) | C29—C24—C17 | 119.66 (13) |
O5—C6—H6A | 110.3 | C25—C24—C17 | 121.91 (13) |
C5—C6—H6A | 110.3 | C24—C25—C26 | 120.77 (15) |
O5—C6—H6B | 110.3 | C24—C25—H25 | 119.6 |
C5—C6—H6B | 110.3 | C26—C25—H25 | 119.6 |
H6A—C6—H6B | 108.5 | C27—C26—C25 | 120.28 (15) |
O3—C7—O2 | 104.61 (12) | C27—C26—H26 | 119.9 |
O3—C7—C8 | 108.15 (13) | C25—C26—H26 | 119.9 |
O2—C7—C8 | 109.10 (13) | C28—C27—C26 | 119.58 (15) |
O3—C7—C9 | 110.17 (13) | C28—C27—H27 | 120.2 |
O2—C7—C9 | 110.61 (13) | C26—C27—H27 | 120.2 |
C8—C7—C9 | 113.78 (15) | C27—C28—C29 | 120.21 (16) |
C7—C8—H8A | 109.5 | C27—C28—H28 | 119.9 |
C7—C8—H8B | 109.5 | C29—C28—H28 | 119.9 |
H8A—C8—H8B | 109.5 | C28—C29—C24 | 120.96 (15) |
C7—C8—H8C | 109.5 | C28—C29—H29 | 119.5 |
H8A—C8—H8C | 109.5 | C24—C29—H29 | 119.5 |
H8B—C8—H8C | 109.5 | C31—C30—C35 | 118.69 (13) |
C7—C9—H9A | 109.5 | C31—C30—C17 | 121.06 (13) |
C7—C9—H9B | 109.5 | C35—C30—C17 | 120.18 (13) |
H9A—C9—H9B | 109.5 | C32—C31—C30 | 120.64 (14) |
C7—C9—H9C | 109.5 | C32—C31—H31 | 119.7 |
H9A—C9—H9C | 109.5 | C30—C31—H31 | 119.7 |
H9B—C9—H9C | 109.5 | C33—C32—C31 | 120.44 (14) |
O4—C10—C11 | 109.10 (13) | C33—C32—H32 | 119.8 |
O4—C10—H10A | 109.9 | C31—C32—H32 | 119.8 |
C11—C10—H10A | 109.9 | C32—C33—C34 | 119.23 (14) |
O4—C10—H10B | 109.9 | C32—C33—H33 | 120.4 |
C11—C10—H10B | 109.9 | C34—C33—H33 | 120.4 |
H10A—C10—H10B | 108.3 | C35—C34—C33 | 120.55 (15) |
C12—C11—C16 | 119.04 (15) | C35—C34—H34 | 119.7 |
C12—C11—C10 | 120.14 (15) | C33—C34—H34 | 119.7 |
C16—C11—C10 | 120.81 (16) | C34—C35—C30 | 120.43 (15) |
C13—C12—C11 | 120.90 (16) | C34—C35—H35 | 119.8 |
C13—C12—H12 | 119.5 | C30—C35—H35 | 119.8 |
C11—C12—H12 | 119.5 | | |
| | | |
C4—O1—C1—O2 | 92.03 (13) | C10—C11—C16—C15 | −179.25 (15) |
C4—O1—C1—C2 | −21.82 (15) | C6—O5—C17—C24 | −54.81 (15) |
C7—O2—C1—O1 | −127.43 (12) | C6—O5—C17—C18 | 71.38 (15) |
C7—O2—C1—C2 | −11.87 (15) | C6—O5—C17—C30 | −174.48 (11) |
C7—O3—C2—C3 | 134.00 (12) | O5—C17—C18—C19 | 25.84 (17) |
C7—O3—C2—C1 | 22.64 (15) | C24—C17—C18—C19 | 148.52 (13) |
O1—C1—C2—O3 | 111.98 (13) | C30—C17—C18—C19 | −86.65 (15) |
O2—C1—C2—O3 | −6.57 (15) | O5—C17—C18—C23 | −159.64 (13) |
O1—C1—C2—C3 | −2.41 (15) | C24—C17—C18—C23 | −36.96 (19) |
O2—C1—C2—C3 | −120.95 (12) | C30—C17—C18—C23 | 87.87 (16) |
C10—O4—C3—C4 | 178.79 (13) | C23—C18—C19—C20 | 0.6 (2) |
C10—O4—C3—C2 | −69.26 (16) | C17—C18—C19—C20 | 175.29 (14) |
O3—C2—C3—O4 | 155.11 (12) | C18—C19—C20—C21 | 0.1 (3) |
C1—C2—C3—O4 | −93.26 (14) | C19—C20—C21—C22 | −0.2 (3) |
O3—C2—C3—C4 | −87.93 (13) | C20—C21—C22—C23 | −0.3 (3) |
C1—C2—C3—C4 | 23.70 (14) | C21—C22—C23—C18 | 0.9 (3) |
C1—O1—C4—C5 | 162.76 (12) | C19—C18—C23—C22 | −1.1 (2) |
C1—O1—C4—C3 | 37.73 (14) | C17—C18—C23—C22 | −175.62 (14) |
O4—C3—C4—O1 | 81.90 (13) | O5—C17—C24—C29 | −80.11 (16) |
C2—C3—C4—O1 | −37.20 (13) | C18—C17—C24—C29 | 156.39 (13) |
O4—C3—C4—C5 | −37.14 (16) | C30—C17—C24—C29 | 34.45 (18) |
C2—C3—C4—C5 | −156.24 (12) | O5—C17—C24—C25 | 93.58 (15) |
N2—N1—C5—C4 | −87.25 (16) | C18—C17—C24—C25 | −29.91 (19) |
N2—N1—C5—C6 | 150.02 (14) | C30—C17—C24—C25 | −151.86 (13) |
O1—C4—C5—N1 | 67.21 (14) | C29—C24—C25—C26 | −2.1 (2) |
C3—C4—C5—N1 | −175.62 (12) | C17—C24—C25—C26 | −175.92 (13) |
O1—C4—C5—C6 | −173.32 (11) | C24—C25—C26—C27 | 0.4 (2) |
C3—C4—C5—C6 | −56.15 (16) | C25—C26—C27—C28 | 1.6 (3) |
C17—O5—C6—C5 | −168.94 (11) | C26—C27—C28—C29 | −1.7 (3) |
N1—C5—C6—O5 | 73.10 (14) | C27—C28—C29—C24 | −0.1 (3) |
C4—C5—C6—O5 | −46.88 (16) | C25—C24—C29—C28 | 2.0 (2) |
C2—O3—C7—O2 | −30.07 (16) | C17—C24—C29—C28 | 175.90 (14) |
C2—O3—C7—C8 | −146.25 (13) | O5—C17—C30—C31 | −4.74 (17) |
C2—O3—C7—C9 | 88.83 (15) | C24—C17—C30—C31 | −121.94 (14) |
C1—O2—C7—O3 | 25.84 (16) | C18—C17—C30—C31 | 111.73 (15) |
C1—O2—C7—C8 | 141.36 (14) | O5—C17—C30—C35 | 178.22 (12) |
C1—O2—C7—C9 | −92.76 (15) | C24—C17—C30—C35 | 61.02 (17) |
C3—O4—C10—C11 | −150.62 (14) | C18—C17—C30—C35 | −65.31 (16) |
O4—C10—C11—C12 | 66.0 (2) | C35—C30—C31—C32 | 1.3 (2) |
O4—C10—C11—C16 | −114.86 (17) | C17—C30—C31—C32 | −175.82 (13) |
C16—C11—C12—C13 | 0.3 (3) | C30—C31—C32—C33 | −0.2 (2) |
C10—C11—C12—C13 | 179.44 (16) | C31—C32—C33—C34 | −1.0 (2) |
C11—C12—C13—C14 | −0.2 (3) | C32—C33—C34—C35 | 1.2 (2) |
C12—C13—C14—C15 | −0.1 (3) | C33—C34—C35—C30 | −0.2 (2) |
C13—C14—C15—C16 | 0.3 (3) | C31—C30—C35—C34 | −1.1 (2) |
C14—C15—C16—C11 | −0.2 (3) | C17—C30—C35—C34 | 176.04 (13) |
C12—C11—C16—C15 | −0.1 (2) | | |
Hydrogen-bond geometry (Å, º) topCg5 and Cg6 are the centroids of the C24–C29 and C30–C35 rings. |
D—H···A | D—H | H···A | D···A | D—H···A |
C13—H13···O3i | 0.95 | 2.56 | 3.281 (2) | 133 |
C1—H1···Cg5ii | 1.00 | 2.90 | 3.8014 (16) | 150 |
C8—H8C···Cg6iii | 0.98 | 2.91 | 3.5435 (18) | 123 |
C12—H12···Cg5 | 0.95 | 2.88 | 3.7503 (18) | 153 |
C15—H15···Cg6i | 0.95 | 2.91 | 3.6050 (18) | 131 |
Symmetry codes: (i) x+1/2, −y+1/2, −z; (ii) x, y+1, z; (iii) −x, y+1/2, −z+1/2. |