The title compound, C3H12N22+·C7H3NO42-·C7H5NO4·2.5H2O, is a proton-transfer system obtained from pyridine-2,6-dicarboxylic acid and propane-1,3-diamine. Both neutral and dianionic forms of the diacid are observed in the crystal structure. The molecular structure contains also the diprotonated form of propane-1,3-diamine as well as water molecules. In the crystal structure, a wide range of hydrogen-bonding interactions connect the various fragments into a supramolecular structure.
Supporting information
CCDC reference: 284317
Key indicators
- Single-crystal X-ray study
- T = 193 K
- Mean
(C-C) = 0.006 Å
- R factor = 0.068
- wR factor = 0.138
- Data-to-parameter ratio = 13.6
checkCIF/PLATON results
No syntax errors found
Alert level A
PLAT355_ALERT_3_A Long O-H Bond (0.82A) O1 - H1O1 ... 1.28 Ang.
| Author Response: the formation of the H-bond the distance between
donor of proton atom and H atom is significantly elongated.
In the case of extremely short H-bonds ( with O...O distance <2.500A)
there is addition problem which is in part connected with
the possible superposition of two different tautomers what in
the some case can lead to pseudosymmetric H-bond or the long O-H distancses.
|
PLAT772_ALERT_2_A Suspect O-H Bond in CIF: O5A -H1OA .. 1.42 Ang.
| Author Response: the formation of the H-bond the distance between
donor of proton atom and H atom is significantly elongated.
In the case of extremely short H-bonds ( with O...O distance <2.500A)
there is addition problem which is in part connected with
the possible superposition of two different tautomers what in
the some case can lead to pseudosymmetric H-bond or the long O-H distancses.
|
Alert level C
PLAT026_ALERT_3_C Ratio Observed / Unique Reflections too Low .... 48 Perc.
PLAT029_ALERT_3_C _diffrn_measured_fraction_theta_full Low ....... 0.96
PLAT041_ALERT_1_C Calc. and Rep. SumFormula Strings Differ .... ?
PLAT042_ALERT_1_C Calc. and Rep. MoietyFormula Strings Differ .... ?
PLAT045_ALERT_1_C Calculated and Reported Z Differ by ............ 0.50 Ratio
PLAT152_ALERT_1_C Supplied and Calc Volume s.u. Inconsistent ..... ?
PLAT213_ALERT_2_C Atom O3 has ADP max/min Ratio ............. 3.70 prolat
PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C7
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.40
PLAT250_ALERT_2_C Large U3/U1 Ratio for Average U(i,j) Tensor .... 2.25
PLAT340_ALERT_3_C Low Bond Precision on C-C bonds (x 1000) Ang ... 6
PLAT355_ALERT_3_C Long O-H Bond (0.82A) O1A - H1OA ... 1.07 Ang.
| Author Response: the formation of the H-bond the distance between
donor of proton atom and H atom is significantly elongated.
In the case of extremely short H-bonds ( with O...O distance <2.500A)
there is addition problem which is in part connected with
the possible superposition of two different tautomers what in
the some case can lead to pseudosymmetric H-bond or the long O-H distancses.
|
PLAT360_ALERT_2_C Short C(sp3)-C(sp3) Bond C15 - C16 ... 1.43 Ang.
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C13 - C14 ... 1.53 Ang.
PLAT369_ALERT_2_C Long C(sp2)-C(sp2) Bond C8A - C9A ... 1.53 Ang.
PLAT720_ALERT_4_C Number of Unusual/Non-Standard Label(s) ........ 28
PLAT790_ALERT_4_C Centre of Gravity not Within Unit Cell: Resd. # 5
C7 H3 N O4
2 ALERT level A = In general: serious problem
0 ALERT level B = Potentially serious problem
17 ALERT level C = Check and explain
0 ALERT level G = General alerts; check
4 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
8 ALERT type 2 Indicator that the structure model may be wrong or deficient
5 ALERT type 3 Indicator that the structure quality may be low
2 ALERT type 4 Improvement, methodology, query or suggestion
Data collection: P3/PC (Siemens, 1989); cell refinement: P3/PC; data reduction: P3/PC; program(s) used to solve structure: SHELXTL-Plus (Sheldrick, 1998); program(s) used to refine structure: SHELXTL-Plus; molecular graphics: SHELXTL-Plus; software used to prepare material for publication: SHELXTL-Plus.
propane-1,3-diaminium–pyridine-2,6-dicarboxylate–pyridine-2,6-dicarboxylic
acid—water (2/2/2/5)
top
Crystal data top
C3H12N22+·C7H3NO42−·C7H5NO4·2.5H2O | Z = 4 |
Mr = 453.41 | F(000) = 956 |
Triclinic, P1 | Dx = 1.474 Mg m−3 |
Hall symbol: -P 1 | Mo Kα radiation, λ = 0.71073 Å |
a = 7.8724 (16) Å | Cell parameters from 24 reflections |
b = 13.534 (3) Å | θ = 9–12° |
c = 20.986 (4) Å | µ = 0.12 mm−1 |
α = 106.64 (3)° | T = 193 K |
β = 90.54 (3)° | Prism, colorless |
γ = 106.54 (3)° | 0.30 × 0.25 × 0.20 mm |
V = 2043.5 (7) Å3 | |
Data collection top
Rebuild Syntex P21/Siemens P3 four-circle diffractometer | Rint = 0.074 |
Radiation source: fine-focus sealed tube | θmax = 26.0°, θmin = 2.2° |
Graphite monochromator | h = 0→9 |
θ/2θ scans | k = −16→16 |
8323 measured reflections | l = −25→25 |
7768 independent reflections | 2 standard reflections every 98 reflections |
3755 reflections with I > 2σ(I) | intensity decay: 1.5% |
Refinement top
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.068 | Hydrogen site location: mixed |
wR(F2) = 0.138 | H-atom parameters constrained |
S = 1.02 | w = 1/[σ2(Fo2) + (0.0007P)2 + 1.66P] where P = (Fo2 + 2Fc2)/3 |
7768 reflections | (Δ/σ)max = 0.001 |
572 parameters | Δρmax = 0.30 e Å−3 |
0 restraints | Δρmin = −0.31 e Å−3 |
Special details top
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor
wR and goodness of fit S are based on F2, conventional
R-factors R are based on F, with F set to zero for
negative F2. The threshold expression of F2 >
σ(F2) is used only for calculating R-factors(gt) etc.
and is not relevant to the choice of reflections for refinement.
R-factors based on F2 are statistically about twice as large
as those based on F, and R- factors based on ALL data will be
even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top | x | y | z | Uiso*/Ueq | |
N1 | 0.3821 (4) | 0.3459 (2) | 0.10000 (17) | 0.0252 (7) | |
N2 | 0.1746 (4) | −0.2737 (2) | −0.08494 (17) | 0.0243 (7) | |
N3 | 0.6725 (4) | 0.1512 (3) | 0.93896 (18) | 0.0304 (8) | |
H1N3 | 0.6829 | 0.0918 | 0.9487 | 0.037* | |
H2N3 | 0.5563 | 0.1411 | 0.9265 | 0.037* | |
H3N3 | 0.7116 | 0.2101 | 0.9757 | 0.037* | |
N4 | 1.2620 (4) | 0.2951 (2) | 0.95487 (17) | 0.0256 (7) | |
H1N4 | 1.3222 | 0.3140 | 0.9959 | 0.031* | |
H2N4 | 1.2787 | 0.3548 | 0.9411 | 0.031* | |
H3N4 | 1.3032 | 0.2457 | 0.9252 | 0.031* | |
O1 | 0.3231 (4) | 0.1398 (2) | 0.02185 (15) | 0.0354 (7) | |
H1O1 | 0.2689 | 0.0391 | −0.0102 | 0.043* | |
O2 | 0.3843 (4) | 0.0879 (2) | 0.10882 (17) | 0.0504 (9) | |
O3 | 0.3208 (5) | 0.4923 (2) | 0.05017 (17) | 0.0643 (11) | |
H3O | 0.3092 | 0.5210 | 0.0150 | 0.077* | |
O4 | 0.4117 (4) | 0.6242 (2) | 0.14469 (16) | 0.0484 (9) | |
O5 | 0.2360 (4) | −0.0572 (2) | −0.03403 (16) | 0.0475 (9) | |
O6 | 0.1356 (4) | −0.0496 (2) | −0.13196 (16) | 0.0410 (8) | |
O7 | 0.2562 (4) | −0.3867 (2) | −0.00802 (14) | 0.0348 (7) | |
O8 | 0.1973 (3) | −0.53586 (19) | −0.09530 (14) | 0.0309 (7) | |
C1 | 0.3719 (5) | 0.1571 (3) | 0.0830 (2) | 0.0308 (10) | |
C2 | 0.4145 (5) | 0.2731 (3) | 0.1269 (2) | 0.0235 (8) | |
C3 | 0.4848 (5) | 0.3002 (3) | 0.1924 (2) | 0.0270 (9) | |
H3A | 0.5072 | 0.2465 | 0.2092 | 0.032* | |
C4 | 0.5226 (5) | 0.4056 (3) | 0.2336 (2) | 0.0312 (9) | |
H4A | 0.5714 | 0.4257 | 0.2786 | 0.037* | |
C5 | 0.4872 (5) | 0.4802 (3) | 0.2070 (2) | 0.0287 (9) | |
H5A | 0.5098 | 0.5531 | 0.2337 | 0.034* | |
C6 | 0.4189 (5) | 0.4484 (3) | 0.1413 (2) | 0.0263 (9) | |
C7 | 0.3819 (5) | 0.5296 (3) | 0.1099 (2) | 0.0259 (9) | |
C8 | 0.1660 (5) | −0.0988 (3) | −0.0935 (2) | 0.0281 (9) | |
C9 | 0.1222 (5) | −0.2206 (3) | −0.1219 (2) | 0.0249 (9) | |
C10 | 0.0280 (5) | −0.2717 (3) | −0.1841 (2) | 0.0276 (9) | |
H10A | −0.0073 | −0.2307 | −0.2087 | 0.033* | |
C11 | −0.0150 (5) | −0.3831 (3) | −0.2106 (2) | 0.0354 (10) | |
H11A | −0.0799 | −0.4201 | −0.2532 | 0.042* | |
C12 | 0.0404 (5) | −0.4382 (3) | −0.1725 (2) | 0.0322 (10) | |
H12A | 0.0133 | −0.5146 | −0.1886 | 0.039* | |
C13 | 0.1349 (5) | −0.3820 (3) | −0.1113 (2) | 0.0225 (8) | |
C14 | 0.1994 (5) | −0.4403 (3) | −0.0681 (2) | 0.0294 (10) | |
C15 | 0.7796 (6) | 0.1684 (5) | 0.8842 (3) | 0.0548 (14) | |
H15A | 0.7276 | 0.1060 | 0.8441 | 0.066* | |
H15D | 0.7648 | 0.2331 | 0.8746 | 0.066* | |
C16 | 0.9661 (6) | 0.1824 (5) | 0.8920 (3) | 0.0597 (15) | |
H16A | 1.0216 | 0.2161 | 0.8582 | 0.072* | |
H16D | 0.9819 | 0.1095 | 0.8806 | 0.072* | |
C17 | 1.0710 (5) | 0.2478 (4) | 0.9588 (2) | 0.0408 (11) | |
H17A | 1.0200 | 0.3069 | 0.9800 | 0.049* | |
H17B | 1.0571 | 0.2008 | 0.9881 | 0.049* | |
N1A | 0.4602 (4) | 0.8346 (2) | 0.59569 (16) | 0.0222 (7) | |
N2A | 0.0451 (4) | 0.2136 (2) | 0.41211 (16) | 0.0225 (7) | |
N3A | 0.4737 (4) | 0.2103 (2) | 0.54707 (17) | 0.0260 (7) | |
H1NA | 0.5077 | 0.1864 | 0.5055 | 0.031* | |
H2NA | 0.4440 | 0.1552 | 0.5655 | 0.031* | |
H3NA | 0.5651 | 0.2655 | 0.5732 | 0.031* | |
N4A | 0.0229 (4) | 0.3461 (2) | 0.55845 (18) | 0.0301 (8) | |
H1NB | 0.0016 | 0.2890 | 0.5206 | 0.036* | |
H2NB | 0.1036 | 0.4046 | 0.5518 | 0.036* | |
H3NB | −0.0804 | 0.3617 | 0.5686 | 0.036* | |
O1A | 0.3161 (3) | 0.6283 (2) | 0.51518 (14) | 0.0337 (7) | |
H1OA | 0.2844 | 0.5438 | 0.4902 | 0.040* | |
O2A | 0.2209 (4) | 0.5737 (2) | 0.60294 (16) | 0.0430 (8) | |
O3A | 0.6727 (4) | 0.9840 (2) | 0.54874 (16) | 0.0460 (8) | |
H3OA | 0.7486 | 1.0368 | 0.5317 | 0.055* | |
O4A | 0.6855 (4) | 1.1163 (2) | 0.64076 (16) | 0.0469 (8) | |
O5A | 0.2021 (4) | 0.4310 (2) | 0.45967 (16) | 0.0415 (8) | |
O6A | 0.3008 (4) | 0.4337 (2) | 0.36167 (17) | 0.0457 (8) | |
O7A | −0.1450 (3) | 0.1025 (2) | 0.48986 (15) | 0.0337 (7) | |
O8A | −0.2393 (3) | −0.0462 (2) | 0.40231 (14) | 0.0314 (7) | |
C1A | 0.2923 (5) | 0.6443 (3) | 0.5779 (2) | 0.0250 (9) | |
C2A | 0.3598 (4) | 0.7606 (3) | 0.6223 (2) | 0.0223 (8) | |
C3A | 0.3168 (5) | 0.7848 (3) | 0.6870 (2) | 0.0269 (9) | |
H3AA | 0.2445 | 0.7295 | 0.7030 | 0.032* | |
C4A | 0.3791 (5) | 0.8899 (3) | 0.7288 (2) | 0.0301 (9) | |
H4AA | 0.3497 | 0.9084 | 0.7736 | 0.036* | |
C5A | 0.4866 (5) | 0.9678 (3) | 0.7030 (2) | 0.0304 (10) | |
H5AA | 0.5341 | 1.0406 | 0.7303 | 0.036* | |
C6A | 0.5231 (5) | 0.9373 (3) | 0.6368 (2) | 0.0230 (8) | |
C7A | 0.6360 (5) | 1.0209 (3) | 0.6079 (2) | 0.0281 (9) | |
C8A | 0.2258 (5) | 0.3868 (3) | 0.4004 (2) | 0.0257 (9) | |
C9A | 0.1503 (5) | 0.2640 (3) | 0.3736 (2) | 0.0234 (8) | |
C10A | 0.1918 (5) | 0.2123 (3) | 0.3128 (2) | 0.0246 (9) | |
H10B | 0.2677 | 0.2521 | 0.2880 | 0.030* | |
C11A | 0.1216 (5) | 0.0998 (3) | 0.2873 (2) | 0.0305 (9) | |
H11B | 0.1488 | 0.0615 | 0.2451 | 0.037* | |
C12A | 0.0121 (5) | 0.0468 (3) | 0.3254 (2) | 0.0281 (9) | |
H12B | −0.0392 | −0.0294 | 0.3096 | 0.034* | |
C13A | −0.0230 (4) | 0.1053 (3) | 0.3868 (2) | 0.0218 (8) | |
C14A | −0.1463 (5) | 0.0481 (3) | 0.4285 (2) | 0.0254 (9) | |
C15A | 0.3180 (5) | 0.2492 (3) | 0.5421 (2) | 0.0276 (9) | |
H15B | 0.2106 | 0.1862 | 0.5247 | 0.033* | |
H15C | 0.3366 | 0.2914 | 0.5098 | 0.033* | |
C16A | 0.2875 (5) | 0.3190 (3) | 0.6088 (2) | 0.0334 (10) | |
H16B | 0.3632 | 0.3943 | 0.6161 | 0.040* | |
H16C | 0.3251 | 0.2934 | 0.6447 | 0.040* | |
C17A | 0.0943 (5) | 0.3182 (3) | 0.6141 (2) | 0.0329 (10) | |
H17C | 0.0208 | 0.2455 | 0.6143 | 0.040* | |
H17D | 0.0857 | 0.3706 | 0.6570 | 0.040* | |
O1W | 0.1356 (4) | 0.3133 (2) | 0.77343 (17) | 0.0466 (8) | |
H1W1 | 0.1567 | 0.3592 | 0.8183 | 0.056* | |
H2W1 | 0.0403 | 0.3156 | 0.7463 | 0.056* | |
O2W | 0.7695 (4) | 0.2990 (2) | 0.74563 (15) | 0.0397 (7) | |
H1W2 | 0.7456 | 0.3548 | 0.7802 | 0.048* | |
H2W2 | 0.6909 | 0.2334 | 0.7172 | 0.048* | |
O3W | 0.3640 (3) | 0.1343 (2) | 0.85864 (14) | 0.0314 (7) | |
H1W3 | 0.3517 | 0.1331 | 0.8133 | 0.038* | |
H2W3 | 0.2799 | 0.0686 | 0.8595 | 0.038* | |
O4W | 0.3539 (4) | 0.1811 (2) | 0.73661 (15) | 0.0384 (7) | |
H1W4 | 0.2757 | 0.2235 | 0.7506 | 0.046* | |
H2W4 | 0.2992 | 0.1413 | 0.6927 | 0.046* | |
O5W | 0.7393 (3) | 0.3771 (2) | 0.63630 (15) | 0.0319 (7) | |
H1W5 | 0.7586 | 0.3734 | 0.6802 | 0.038* | |
H2W5 | 0.7308 | 0.4484 | 0.6461 | 0.038* | |
Atomic displacement parameters (Å2) top | U11 | U22 | U33 | U12 | U13 | U23 |
N1 | 0.0243 (17) | 0.0210 (16) | 0.035 (2) | 0.0088 (13) | 0.0022 (14) | 0.0138 (15) |
N2 | 0.0212 (16) | 0.0224 (16) | 0.035 (2) | 0.0093 (13) | 0.0082 (14) | 0.0148 (15) |
N3 | 0.0253 (18) | 0.0282 (17) | 0.041 (2) | 0.0101 (14) | 0.0014 (15) | 0.0130 (16) |
N4 | 0.0306 (17) | 0.0151 (15) | 0.031 (2) | 0.0070 (13) | 0.0015 (14) | 0.0069 (14) |
O1 | 0.0499 (18) | 0.0209 (14) | 0.038 (2) | 0.0124 (13) | −0.0030 (14) | 0.0104 (13) |
O2 | 0.081 (2) | 0.0269 (16) | 0.051 (2) | 0.0208 (16) | −0.0079 (18) | 0.0194 (15) |
O3 | 0.127 (3) | 0.0234 (16) | 0.045 (2) | 0.0349 (19) | −0.032 (2) | 0.0039 (15) |
O4 | 0.079 (2) | 0.0172 (15) | 0.046 (2) | 0.0137 (15) | −0.0018 (17) | 0.0051 (14) |
O5 | 0.073 (2) | 0.0196 (14) | 0.049 (2) | 0.0149 (15) | −0.0153 (18) | 0.0085 (14) |
O6 | 0.0544 (19) | 0.0272 (15) | 0.047 (2) | 0.0121 (14) | −0.0082 (15) | 0.0199 (15) |
O7 | 0.0558 (19) | 0.0220 (14) | 0.0294 (19) | 0.0178 (13) | −0.0040 (14) | 0.0061 (13) |
O8 | 0.0424 (17) | 0.0171 (13) | 0.0353 (18) | 0.0148 (12) | 0.0016 (13) | 0.0050 (12) |
C1 | 0.036 (2) | 0.025 (2) | 0.040 (3) | 0.0128 (18) | 0.003 (2) | 0.019 (2) |
C2 | 0.024 (2) | 0.0227 (19) | 0.027 (2) | 0.0073 (15) | 0.0039 (17) | 0.0114 (17) |
C3 | 0.027 (2) | 0.032 (2) | 0.031 (3) | 0.0131 (17) | 0.0053 (18) | 0.0183 (19) |
C4 | 0.029 (2) | 0.037 (2) | 0.026 (3) | 0.0068 (18) | −0.0011 (18) | 0.0096 (19) |
C5 | 0.025 (2) | 0.0232 (19) | 0.035 (3) | 0.0041 (16) | 0.0032 (18) | 0.0077 (18) |
C6 | 0.023 (2) | 0.0199 (19) | 0.035 (3) | 0.0039 (16) | 0.0048 (18) | 0.0087 (18) |
C7 | 0.028 (2) | 0.021 (2) | 0.027 (3) | 0.0041 (16) | 0.0009 (18) | 0.0067 (18) |
C8 | 0.029 (2) | 0.025 (2) | 0.030 (3) | 0.0077 (17) | −0.0043 (18) | 0.0088 (19) |
C9 | 0.0196 (19) | 0.0232 (19) | 0.037 (3) | 0.0057 (16) | 0.0062 (17) | 0.0176 (18) |
C10 | 0.026 (2) | 0.025 (2) | 0.031 (3) | 0.0063 (16) | −0.0047 (18) | 0.0091 (18) |
C11 | 0.035 (2) | 0.028 (2) | 0.038 (3) | 0.0033 (18) | −0.007 (2) | 0.009 (2) |
C12 | 0.029 (2) | 0.0191 (19) | 0.052 (3) | 0.0079 (17) | 0.004 (2) | 0.014 (2) |
C13 | 0.0203 (19) | 0.0176 (18) | 0.033 (3) | 0.0052 (15) | 0.0029 (17) | 0.0135 (17) |
C14 | 0.030 (2) | 0.020 (2) | 0.040 (3) | 0.0071 (16) | 0.0049 (19) | 0.0132 (19) |
C15 | 0.033 (3) | 0.076 (4) | 0.051 (4) | 0.012 (2) | 0.009 (2) | 0.017 (3) |
C16 | 0.032 (3) | 0.087 (4) | 0.039 (3) | 0.002 (3) | 0.002 (2) | 0.003 (3) |
C17 | 0.028 (2) | 0.055 (3) | 0.045 (3) | 0.011 (2) | 0.014 (2) | 0.024 (2) |
N1A | 0.0164 (16) | 0.0178 (15) | 0.034 (2) | 0.0046 (12) | 0.0070 (13) | 0.0109 (14) |
N2A | 0.0186 (16) | 0.0228 (16) | 0.028 (2) | 0.0062 (13) | 0.0032 (13) | 0.0105 (15) |
N3A | 0.0243 (17) | 0.0220 (16) | 0.034 (2) | 0.0076 (13) | 0.0066 (14) | 0.0105 (15) |
N4A | 0.0229 (17) | 0.0247 (17) | 0.048 (2) | 0.0091 (14) | 0.0057 (15) | 0.0176 (16) |
O1A | 0.0419 (17) | 0.0214 (14) | 0.0336 (19) | 0.0008 (12) | 0.0074 (13) | 0.0104 (13) |
O2A | 0.0506 (19) | 0.0267 (15) | 0.047 (2) | −0.0016 (13) | 0.0094 (15) | 0.0170 (15) |
O3A | 0.061 (2) | 0.0185 (14) | 0.045 (2) | −0.0067 (13) | 0.0215 (16) | 0.0073 (14) |
O4A | 0.057 (2) | 0.0217 (16) | 0.050 (2) | 0.0019 (14) | 0.0201 (16) | 0.0015 (15) |
O5A | 0.0546 (19) | 0.0222 (15) | 0.041 (2) | −0.0031 (13) | 0.0094 (15) | 0.0131 (14) |
O6A | 0.060 (2) | 0.0251 (15) | 0.058 (2) | 0.0105 (14) | 0.0298 (17) | 0.0221 (16) |
O7A | 0.0327 (16) | 0.0231 (14) | 0.037 (2) | −0.0064 (12) | 0.0032 (13) | 0.0115 (13) |
O8A | 0.0326 (15) | 0.0212 (14) | 0.0334 (18) | −0.0040 (12) | −0.0021 (13) | 0.0095 (13) |
C1A | 0.028 (2) | 0.024 (2) | 0.027 (3) | 0.0069 (16) | 0.0050 (17) | 0.0136 (18) |
C2A | 0.0184 (19) | 0.0240 (19) | 0.032 (2) | 0.0115 (16) | 0.0052 (16) | 0.0145 (18) |
C3A | 0.026 (2) | 0.031 (2) | 0.029 (3) | 0.0107 (17) | 0.0055 (17) | 0.0153 (19) |
C4A | 0.039 (2) | 0.026 (2) | 0.027 (3) | 0.0158 (18) | 0.0069 (19) | 0.0060 (18) |
C5A | 0.029 (2) | 0.024 (2) | 0.041 (3) | 0.0109 (17) | 0.0059 (19) | 0.0108 (19) |
C6A | 0.0187 (19) | 0.0240 (19) | 0.031 (2) | 0.0096 (15) | 0.0026 (16) | 0.0124 (18) |
C7A | 0.025 (2) | 0.018 (2) | 0.040 (3) | 0.0060 (16) | 0.0053 (19) | 0.0081 (19) |
C8A | 0.024 (2) | 0.0187 (19) | 0.033 (3) | 0.0045 (16) | 0.0048 (18) | 0.0070 (18) |
C9A | 0.021 (2) | 0.0214 (18) | 0.027 (2) | 0.0042 (15) | 0.0003 (16) | 0.0081 (17) |
C10A | 0.024 (2) | 0.026 (2) | 0.028 (2) | 0.0084 (16) | 0.0041 (17) | 0.0131 (18) |
C11A | 0.029 (2) | 0.027 (2) | 0.032 (3) | 0.0075 (17) | 0.0008 (18) | 0.0060 (19) |
C12A | 0.029 (2) | 0.0194 (18) | 0.031 (3) | 0.0024 (16) | 0.0033 (18) | 0.0040 (18) |
C13A | 0.0155 (18) | 0.0184 (18) | 0.027 (2) | 0.0009 (14) | −0.0078 (16) | 0.0051 (16) |
C14A | 0.025 (2) | 0.020 (2) | 0.027 (3) | 0.0007 (16) | −0.0054 (17) | 0.0084 (18) |
C15A | 0.024 (2) | 0.026 (2) | 0.035 (3) | 0.0109 (16) | 0.0012 (17) | 0.0101 (18) |
C16A | 0.026 (2) | 0.033 (2) | 0.043 (3) | 0.0113 (18) | 0.0010 (19) | 0.012 (2) |
C17A | 0.030 (2) | 0.035 (2) | 0.036 (3) | 0.0093 (18) | 0.0063 (19) | 0.013 (2) |
O1W | 0.0454 (19) | 0.0418 (18) | 0.053 (2) | 0.0237 (15) | −0.0047 (16) | 0.0042 (16) |
O2W | 0.0406 (17) | 0.0269 (15) | 0.042 (2) | 0.0060 (13) | −0.0042 (14) | −0.0002 (13) |
O3W | 0.0286 (15) | 0.0316 (15) | 0.0353 (18) | 0.0103 (12) | 0.0031 (12) | 0.0105 (13) |
O4W | 0.0364 (17) | 0.0278 (15) | 0.047 (2) | 0.0114 (13) | −0.0049 (14) | 0.0038 (14) |
O5W | 0.0275 (14) | 0.0243 (14) | 0.0423 (19) | 0.0066 (11) | 0.0004 (13) | 0.0085 (13) |
Geometric parameters (Å, º) top
N1—C2 | 1.348 (4) | N3A—H1NA | 0.9100 |
N1—C6 | 1.356 (5) | N3A—H2NA | 0.9100 |
N2—C9 | 1.330 (4) | N3A—H3NA | 0.9100 |
N2—C13 | 1.351 (5) | N4A—C17A | 1.478 (5) |
N3—C15 | 1.465 (6) | N4A—H1NB | 0.9100 |
N3—H1N3 | 0.9100 | N4A—H2NB | 0.9100 |
N3—H2N3 | 0.9100 | N4A—H3NB | 0.9100 |
N3—H3N3 | 0.9100 | O1A—C1A | 1.296 (5) |
N4—C17 | 1.470 (5) | O1A—H1OA | 1.0655 |
N4—H1N4 | 0.9100 | O2A—C1A | 1.222 (4) |
N4—H2N4 | 0.9100 | O3A—C7A | 1.269 (5) |
N4—H3N4 | 0.9100 | O3A—H3OA | 0.9500 |
O1—C1 | 1.273 (5) | O4A—C7A | 1.222 (5) |
O1—H1O1 | 1.2775 | O5A—C8A | 1.258 (5) |
O2—C1 | 1.233 (4) | O5A—H1OA | 1.4247 |
O3—C7 | 1.243 (5) | O6A—C8A | 1.226 (5) |
O3—H3O | 0.9416 | O7A—C14A | 1.286 (5) |
O4—C7 | 1.232 (5) | O8A—C14A | 1.236 (4) |
O5—C8 | 1.260 (5) | C1A—C2A | 1.518 (5) |
O5—H1O1 | 1.2028 | C2A—C3A | 1.371 (5) |
O6—C8 | 1.244 (4) | C3A—C4A | 1.383 (6) |
O7—C14 | 1.263 (5) | C3A—H3AA | 0.9500 |
O8—C14 | 1.251 (4) | C4A—C5A | 1.396 (5) |
C1—C2 | 1.514 (5) | C4A—H4AA | 0.9500 |
C2—C3 | 1.382 (5) | C5A—C6A | 1.390 (6) |
C3—C4 | 1.385 (6) | C5A—H5AA | 0.9500 |
C3—H3A | 0.9500 | C6A—C7A | 1.505 (5) |
C4—C5 | 1.374 (5) | C8A—C9A | 1.525 (5) |
C4—H4A | 0.9500 | C9A—C10A | 1.361 (5) |
C5—C6 | 1.374 (6) | C10A—C11A | 1.399 (5) |
C5—H5A | 0.9500 | C10A—H10B | 0.9500 |
C6—C7 | 1.522 (5) | C11A—C12A | 1.374 (5) |
C8—C9 | 1.516 (5) | C11A—H11B | 0.9500 |
C9—C10 | 1.380 (5) | C12A—C13A | 1.383 (5) |
C10—C11 | 1.387 (5) | C12A—H12B | 0.9500 |
C10—H10A | 0.9500 | C13A—C14A | 1.511 (5) |
C11—C12 | 1.379 (5) | C15A—C16A | 1.514 (6) |
C11—H11A | 0.9500 | C15A—H15B | 0.9900 |
C12—C13 | 1.373 (6) | C15A—H15C | 0.9900 |
C12—H12A | 0.9500 | C16A—C17A | 1.523 (5) |
C13—C14 | 1.527 (5) | C16A—H16B | 0.9900 |
C15—C16 | 1.427 (6) | C16A—H16C | 0.9900 |
C15—H15A | 0.9900 | C17A—H17C | 0.9900 |
C15—H15D | 0.9900 | C17A—H17D | 0.9900 |
C16—C17 | 1.511 (6) | O1W—H1W1 | 0.9500 |
C16—H16A | 0.9900 | O1W—H2W1 | 0.9504 |
C16—H16D | 0.9900 | O2W—H1W2 | 0.9499 |
C17—H17A | 0.9900 | O2W—H2W2 | 0.9501 |
C17—H17B | 0.9900 | O3W—H1W3 | 0.9500 |
N1A—C2A | 1.348 (4) | O3W—H2W3 | 0.9501 |
N1A—C6A | 1.354 (5) | O4W—H1W4 | 0.9502 |
N2A—C9A | 1.346 (5) | O4W—H2W4 | 0.9500 |
N2A—C13A | 1.348 (4) | O5W—H1W5 | 0.9500 |
N3A—C15A | 1.478 (4) | O5W—H2W5 | 0.9500 |
| | | |
C2—N1—C6 | 116.2 (3) | C15A—N3A—H2NA | 109.5 |
C9—N2—C13 | 117.2 (3) | H1NA—N3A—H2NA | 109.5 |
C15—N3—H1N3 | 109.5 | C15A—N3A—H3NA | 109.5 |
C15—N3—H2N3 | 109.5 | H1NA—N3A—H3NA | 109.5 |
H1N3—N3—H2N3 | 109.5 | H2NA—N3A—H3NA | 109.5 |
C15—N3—H3N3 | 109.5 | C17A—N4A—H1NB | 109.5 |
H1N3—N3—H3N3 | 109.5 | C17A—N4A—H2NB | 109.5 |
H2N3—N3—H3N3 | 109.5 | H1NB—N4A—H2NB | 109.5 |
C17—N4—H1N4 | 109.5 | C17A—N4A—H3NB | 109.5 |
C17—N4—H2N4 | 109.5 | H1NB—N4A—H3NB | 109.5 |
H1N4—N4—H2N4 | 109.5 | H2NB—N4A—H3NB | 109.5 |
C17—N4—H3N4 | 109.5 | C1A—O1A—H1OA | 110.0 |
H1N4—N4—H3N4 | 109.5 | C7A—O3A—H3OA | 114.4 |
H2N4—N4—H3N4 | 109.5 | C8A—O5A—H1OA | 120.2 |
C1—O1—H1O1 | 112.2 | O2A—C1A—O1A | 125.0 (4) |
C7—O3—H3O | 136.0 | O2A—C1A—C2A | 118.9 (4) |
C8—O5—H1O1 | 117.7 | O1A—C1A—C2A | 116.0 (3) |
O2—C1—O1 | 125.7 (4) | N1A—C2A—C3A | 123.6 (4) |
O2—C1—C2 | 118.6 (4) | N1A—C2A—C1A | 117.7 (4) |
O1—C1—C2 | 115.8 (3) | C3A—C2A—C1A | 118.7 (3) |
N1—C2—C3 | 122.7 (3) | C2A—C3A—C4A | 119.9 (4) |
N1—C2—C1 | 118.0 (3) | C2A—C3A—H3AA | 120.1 |
C3—C2—C1 | 119.2 (3) | C4A—C3A—H3AA | 120.1 |
C2—C3—C4 | 120.1 (4) | C3A—C4A—C5A | 117.8 (4) |
C2—C3—H3A | 120.0 | C3A—C4A—H4AA | 121.1 |
C4—C3—H3A | 120.0 | C5A—C4A—H4AA | 121.1 |
C5—C4—C3 | 117.7 (4) | C6A—C5A—C4A | 119.0 (4) |
C5—C4—H4A | 121.1 | C6A—C5A—H5AA | 120.5 |
C3—C4—H4A | 121.1 | C4A—C5A—H5AA | 120.5 |
C4—C5—C6 | 119.5 (4) | N1A—C6A—C5A | 123.1 (3) |
C4—C5—H5A | 120.3 | N1A—C6A—C7A | 117.3 (4) |
C6—C5—H5A | 120.3 | C5A—C6A—C7A | 119.6 (3) |
N1—C6—C5 | 123.8 (4) | O4A—C7A—O3A | 124.5 (4) |
N1—C6—C7 | 115.4 (4) | O4A—C7A—C6A | 120.6 (4) |
C5—C6—C7 | 120.8 (3) | O3A—C7A—C6A | 114.9 (3) |
O4—C7—O3 | 125.7 (4) | O6A—C8A—O5A | 125.8 (4) |
O4—C7—C6 | 118.8 (4) | O6A—C8A—C9A | 117.0 (4) |
O3—C7—C6 | 115.5 (3) | O5A—C8A—C9A | 117.2 (3) |
O6—C8—O5 | 126.4 (4) | N2A—C9A—C10A | 124.0 (3) |
O6—C8—C9 | 116.9 (4) | N2A—C9A—C8A | 117.3 (4) |
O5—C8—C9 | 116.6 (3) | C10A—C9A—C8A | 118.7 (3) |
N2—C9—C10 | 122.8 (3) | C9A—C10A—C11A | 119.3 (4) |
N2—C9—C8 | 118.2 (4) | C9A—C10A—H10B | 120.3 |
C10—C9—C8 | 119.0 (3) | C11A—C10A—H10B | 120.3 |
C9—C10—C11 | 119.9 (4) | C12A—C11A—C10A | 117.6 (4) |
C9—C10—H10A | 120.1 | C12A—C11A—H11B | 121.2 |
C11—C10—H10A | 120.1 | C10A—C11A—H11B | 121.2 |
C12—C11—C10 | 117.3 (4) | C11A—C12A—C13A | 119.5 (4) |
C12—C11—H11A | 121.3 | C11A—C12A—H12B | 120.2 |
C10—C11—H11A | 121.3 | C13A—C12A—H12B | 120.2 |
C13—C12—C11 | 119.7 (4) | N2A—C13A—C12A | 123.3 (3) |
C13—C12—H12A | 120.1 | N2A—C13A—C14A | 116.7 (4) |
C11—C12—H12A | 120.1 | C12A—C13A—C14A | 119.9 (3) |
N2—C13—C12 | 123.0 (3) | O8A—C14A—O7A | 124.6 (4) |
N2—C13—C14 | 115.9 (3) | O8A—C14A—C13A | 119.0 (4) |
C12—C13—C14 | 121.1 (3) | O7A—C14A—C13A | 116.4 (3) |
O8—C14—O7 | 125.2 (4) | N3A—C15A—C16A | 112.1 (3) |
O8—C14—C13 | 117.6 (4) | N3A—C15A—H15B | 109.2 |
O7—C14—C13 | 117.2 (3) | C16A—C15A—H15B | 109.2 |
C16—C15—N3 | 119.2 (4) | N3A—C15A—H15C | 109.2 |
C16—C15—H15A | 107.5 | C16A—C15A—H15C | 109.2 |
N3—C15—H15A | 107.5 | H15B—C15A—H15C | 107.9 |
C16—C15—H15D | 107.5 | C15A—C16A—C17A | 113.4 (3) |
N3—C15—H15D | 107.5 | C15A—C16A—H16B | 108.9 |
H15A—C15—H15D | 107.0 | C17A—C16A—H16B | 108.9 |
C15—C16—C17 | 119.3 (4) | C15A—C16A—H16C | 108.9 |
C15—C16—H16A | 107.5 | C17A—C16A—H16C | 108.9 |
C17—C16—H16A | 107.5 | H16B—C16A—H16C | 107.7 |
C15—C16—H16D | 107.5 | N4A—C17A—C16A | 112.2 (3) |
C17—C16—H16D | 107.5 | N4A—C17A—H17C | 109.2 |
H16A—C16—H16D | 107.0 | C16A—C17A—H17C | 109.2 |
N4—C17—C16 | 114.1 (4) | N4A—C17A—H17D | 109.2 |
N4—C17—H17A | 108.7 | C16A—C17A—H17D | 109.2 |
C16—C17—H17A | 108.7 | H17C—C17A—H17D | 107.9 |
N4—C17—H17B | 108.7 | H1W1—O1W—H2W1 | 116.9 |
C16—C17—H17B | 108.7 | H1W2—O2W—H2W2 | 130.4 |
H17A—C17—H17B | 107.6 | H1W3—O3W—H2W3 | 103.7 |
C2A—N1A—C6A | 116.6 (3) | H1W4—O4W—H2W4 | 99.3 |
C9A—N2A—C13A | 116.2 (3) | H1W5—O5W—H2W5 | 100.4 |
C15A—N3A—H1NA | 109.5 | | |
| | | |
C6—N1—C2—C3 | −1.3 (5) | C6A—N1A—C2A—C3A | 1.4 (5) |
C6—N1—C2—C1 | 178.8 (3) | C6A—N1A—C2A—C1A | −178.2 (3) |
O2—C1—C2—N1 | −173.0 (4) | O2A—C1A—C2A—N1A | 170.7 (3) |
O1—C1—C2—N1 | 6.1 (5) | O1A—C1A—C2A—N1A | −9.4 (5) |
O2—C1—C2—C3 | 7.2 (6) | O2A—C1A—C2A—C3A | −8.9 (5) |
O1—C1—C2—C3 | −173.8 (3) | O1A—C1A—C2A—C3A | 171.1 (3) |
N1—C2—C3—C4 | 0.9 (6) | N1A—C2A—C3A—C4A | −0.6 (6) |
C1—C2—C3—C4 | −179.2 (4) | C1A—C2A—C3A—C4A | 178.9 (3) |
C2—C3—C4—C5 | 0.3 (6) | C2A—C3A—C4A—C5A | −0.7 (5) |
C3—C4—C5—C6 | −0.9 (6) | C3A—C4A—C5A—C6A | 1.2 (5) |
C2—N1—C6—C5 | 0.7 (5) | C2A—N1A—C6A—C5A | −0.8 (5) |
C2—N1—C6—C7 | 179.8 (3) | C2A—N1A—C6A—C7A | 179.8 (3) |
C4—C5—C6—N1 | 0.4 (6) | C4A—C5A—C6A—N1A | −0.5 (6) |
C4—C5—C6—C7 | −178.7 (3) | C4A—C5A—C6A—C7A | 178.9 (3) |
N1—C6—C7—O4 | 179.7 (4) | N1A—C6A—C7A—O4A | 174.4 (4) |
C5—C6—C7—O4 | −1.1 (6) | C5A—C6A—C7A—O4A | −5.0 (6) |
N1—C6—C7—O3 | 0.6 (5) | N1A—C6A—C7A—O3A | −5.5 (5) |
C5—C6—C7—O3 | 179.8 (4) | C5A—C6A—C7A—O3A | 175.1 (4) |
C13—N2—C9—C10 | 1.2 (5) | C13A—N2A—C9A—C10A | −1.0 (5) |
C13—N2—C9—C8 | −179.7 (3) | C13A—N2A—C9A—C8A | 178.7 (3) |
O6—C8—C9—N2 | 171.3 (3) | O6A—C8A—C9A—N2A | −170.2 (3) |
O5—C8—C9—N2 | −6.1 (5) | O5A—C8A—C9A—N2A | 8.2 (5) |
O6—C8—C9—C10 | −9.6 (6) | O6A—C8A—C9A—C10A | 9.5 (5) |
O5—C8—C9—C10 | 173.1 (4) | O5A—C8A—C9A—C10A | −172.1 (3) |
N2—C9—C10—C11 | −0.3 (6) | N2A—C9A—C10A—C11A | 0.5 (6) |
C8—C9—C10—C11 | −179.3 (4) | C8A—C9A—C10A—C11A | −179.2 (3) |
C9—C10—C11—C12 | −0.2 (6) | C9A—C10A—C11A—C12A | 0.3 (6) |
C10—C11—C12—C13 | −0.4 (6) | C10A—C11A—C12A—C13A | −0.6 (5) |
C9—N2—C13—C12 | −1.8 (5) | C9A—N2A—C13A—C12A | 0.7 (5) |
C9—N2—C13—C14 | 179.2 (3) | C9A—N2A—C13A—C14A | −178.0 (3) |
C11—C12—C13—N2 | 1.4 (6) | C11A—C12A—C13A—N2A | 0.1 (6) |
C11—C12—C13—C14 | −179.6 (4) | C11A—C12A—C13A—C14A | 178.7 (3) |
N2—C13—C14—O8 | −166.1 (3) | N2A—C13A—C14A—O8A | 165.6 (3) |
C12—C13—C14—O8 | 14.9 (6) | C12A—C13A—C14A—O8A | −13.1 (5) |
N2—C13—C14—O7 | 11.6 (5) | N2A—C13A—C14A—O7A | −15.0 (5) |
C12—C13—C14—O7 | −167.4 (4) | C12A—C13A—C14A—O7A | 166.3 (3) |
N3—C15—C16—C17 | −39.1 (8) | N3A—C15A—C16A—C17A | −153.7 (3) |
C15—C16—C17—N4 | −155.5 (5) | C15A—C16A—C17A—N4A | −53.4 (4) |
Hydrogen-bond geometry (Å, º) top
D—H···A | D—H | H···A | D···A | D—H···A |
N3—H1N3···O5i | 0.91 | 2.11 | 2.841 (4) | 136 |
N3—H1N3···O2i | 0.91 | 2.29 | 2.997 (4) | 135 |
N3—H2N3···O3W | 0.91 | 2.03 | 2.859 (4) | 150 |
N3—H3N3···O7i | 0.91 | 2.23 | 2.982 (4) | 140 |
N3—H3N3···N2i | 0.91 | 2.28 | 3.077 (4) | 146 |
N4—H1N4···N1ii | 0.91 | 2.12 | 3.003 (4) | 162 |
N4—H2N4···O8iii | 0.91 | 2.09 | 2.938 (4) | 155 |
N4—H3N4···O3Wiv | 0.91 | 1.92 | 2.823 (4) | 174 |
O3—H3O···O7v | 0.94 | 1.61 | 2.457 (4) | 147 |
O3—H3O···O7v | 0.94 | 1.61 | 2.457 (4) | 147 |
O3—H3O···O8v | 0.94 | 2.30 | 3.078 (4) | 140 |
O5—H1O1···O1 | 1.20 | 1.28 | 2.471 (4) | 170 |
N3A—H1NA···N1Avi | 0.91 | 2.09 | 2.963 (4) | 161 |
N3A—H1NA···O3Avi | 0.91 | 2.29 | 2.737 (4) | 110 |
N3A—H2NA···O8Avii | 0.91 | 2.11 | 2.919 (4) | 147 |
N3A—H3NA···O5W | 0.91 | 1.89 | 2.791 (4) | 173 |
N4A—H1NB···N2A | 0.91 | 2.29 | 3.116 (4) | 152 |
N4A—H1NB···O7A | 0.91 | 2.35 | 3.074 (4) | 137 |
N4A—H2NB···O2A | 0.91 | 2.15 | 2.895 (4) | 139 |
N4A—H2NB···O5A | 0.91 | 2.18 | 2.847 (4) | 130 |
N4A—H3NB···O5Wviii | 0.91 | 2.03 | 2.836 (4) | 147 |
O1A—H1OA···O5A | 1.07 | 1.43 | 2.475 (4) | 167 |
O3A—H3OA···O7Aix | 0.95 | 1.52 | 2.453 (4) | 167 |
O1W—H1W1···O8x | 0.95 | 1.91 | 2.861 (4) | 174 |
O1W—H2W1···O2Wviii | 0.95 | 2.08 | 2.876 (4) | 140 |
O2W—H1W2···O4vi | 0.95 | 2.02 | 2.820 (4) | 141 |
O2W—H2W2···O4Axi | 0.95 | 1.90 | 2.705 (4) | 142 |
O3W—H1W3···O4W | 0.95 | 1.90 | 2.814 (4) | 161 |
O3W—H2W3···O6xii | 0.95 | 1.74 | 2.684 (4) | 175 |
O4W—H1W4···O1W | 0.95 | 1.83 | 2.781 (4) | 175 |
O4W—H2W4···O8Avii | 0.95 | 2.01 | 2.934 (4) | 166 |
O5W—H1W5···O2W | 0.95 | 1.94 | 2.821 (4) | 154 |
O5W—H2W5···O6Avi | 0.95 | 1.73 | 2.656 (4) | 163 |
Symmetry codes: (i) −x+1, −y, −z+1; (ii) x+1, y, z+1; (iii) x+1, y+1, z+1; (iv) x+1, y, z; (v) x, y+1, z; (vi) −x+1, −y+1, −z+1; (vii) −x, −y, −z+1; (viii) x−1, y, z; (ix) x+1, y+1, z; (x) x, y+1, z+1; (xi) x, y−1, z; (xii) x, y, z+1. |