Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536808007770/tk2252sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536808007770/tk2252Isup2.hkl |
CCDC reference: 680125
Key indicators
- Single-crystal X-ray study
- T = 294 K
- Mean (C-C) = 0.003 Å
- R factor = 0.021
- wR factor = 0.054
- Data-to-parameter ratio = 13.2
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT062_ALERT_4_C Rescale T(min) & T(max) by ..................... 0.98
0 ALERT level A = In general: serious problem 0 ALERT level B = Potentially serious problem 1 ALERT level C = Check and explain 0 ALERT level G = General alerts; check 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 0 ALERT type 2 Indicator that the structure model may be wrong or deficient 0 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Pyridine-3-sulfonate, (1 mmol, 159 mg) was dissolved in methanol (A.R., 99.9%) (10 ml). To the resulting clear solution was added CdCl2.6H2O (0.5 mmol, 149 mg) in methanol (10 ml). After keeping the resulting mixture in air to evaporate about half of the solvent, colourless blocks of (I) were deposited. The crystals were isolated, washed with ethanol three times (Yield 74%). Analysis: found: C, 25.98; H, 2.66; N, 6.08; S, 13.84; C10H12CdN2O8S2 requires: C, 25.82; H, 2.58; N, 6.02; S, 14.27.
The C-bound H atoms were included in the riding model approximation with C—H = 0.93–0.96 Å, and with Uiso(H)= 1.2Ueq(C)-1.5Ueq(C). The water-bound H atoms were located in difference Fourier maps and the O—H distances were refined without constraint, see Table 1 for distances.
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
[Cd(C5H4NO3S)2(H2O)2] | F(000) = 460 |
Mr = 464.74 | Dx = 2.065 Mg m−3 |
Monoclinic, P21/c | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: -P 2ybc | Cell parameters from 3022 reflections |
a = 7.7480 (11) Å | θ = 3.1–26.3° |
b = 13.264 (2) Å | µ = 1.78 mm−1 |
c = 7.3291 (11) Å | T = 294 K |
β = 97.081 (2)° | Block, colourless |
V = 747.47 (19) Å3 | 0.26 × 0.22 × 0.18 mm |
Z = 2 |
Bruker SMART CCD area-detector diffractometer | 1520 independent reflections |
Radiation source: fine-focus sealed tube | 1396 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.023 |
ϕ and ο scans | θmax = 26.3°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | h = −9→6 |
Tmin = 0.674, Tmax = 0.740 | k = −16→15 |
4111 measured reflections | l = −4→9 |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.021 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.053 | w = 1/[σ2(Fo2) + (0.0952P)2 + 1.5031P] where P = (Fo2 + 2Fc2)/3 |
S = 1.10 | (Δ/σ)max = 0.001 |
1520 reflections | Δρmax = 0.42 e Å−3 |
115 parameters | Δρmin = −0.73 e Å−3 |
0 restraints | Extinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.087 (3) |
[Cd(C5H4NO3S)2(H2O)2] | V = 747.47 (19) Å3 |
Mr = 464.74 | Z = 2 |
Monoclinic, P21/c | Mo Kα radiation |
a = 7.7480 (11) Å | µ = 1.78 mm−1 |
b = 13.264 (2) Å | T = 294 K |
c = 7.3291 (11) Å | 0.26 × 0.22 × 0.18 mm |
β = 97.081 (2)° |
Bruker SMART CCD area-detector diffractometer | 1520 independent reflections |
Absorption correction: multi-scan (SADABS; Bruker, 1998) | 1396 reflections with I > 2σ(I) |
Tmin = 0.674, Tmax = 0.740 | Rint = 0.023 |
4111 measured reflections |
R[F2 > 2σ(F2)] = 0.021 | 0 restraints |
wR(F2) = 0.053 | H atoms treated by a mixture of independent and constrained refinement |
S = 1.10 | Δρmax = 0.42 e Å−3 |
1520 reflections | Δρmin = −0.73 e Å−3 |
115 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Cd1 | 0.0000 | 0.5000 | 0.5000 | 0.02008 (12) | |
S1 | 0.71583 (7) | 0.62259 (4) | 0.77922 (8) | 0.02183 (15) | |
N1 | 0.2044 (2) | 0.62074 (14) | 0.6090 (3) | 0.0246 (4) | |
O1 | 0.7687 (2) | 0.57880 (16) | 0.6122 (3) | 0.0449 (5) | |
O2 | 0.7069 (2) | 0.54880 (14) | 0.9231 (3) | 0.0392 (5) | |
O3 | 0.8146 (2) | 0.71095 (13) | 0.8402 (3) | 0.0377 (4) | |
C1 | 0.3697 (3) | 0.59388 (16) | 0.6647 (3) | 0.0234 (5) | |
H1 | 0.3979 | 0.5257 | 0.6722 | 0.028* | |
C2 | 0.4994 (3) | 0.66450 (17) | 0.7113 (3) | 0.0202 (4) | |
C3 | 0.4585 (3) | 0.76576 (17) | 0.7005 (4) | 0.0276 (5) | |
H3 | 0.5439 | 0.8143 | 0.7300 | 0.033* | |
C4 | 0.2885 (3) | 0.79362 (18) | 0.6450 (4) | 0.0317 (5) | |
H4 | 0.2572 | 0.8613 | 0.6380 | 0.038* | |
C5 | 0.1657 (3) | 0.71933 (18) | 0.6000 (3) | 0.0268 (5) | |
H5 | 0.0514 | 0.7385 | 0.5619 | 0.032* | |
O4 | 0.0841 (3) | 0.40325 (16) | 0.7537 (3) | 0.0359 (4) | |
H4A | 0.140 (4) | 0.426 (2) | 0.845 (5) | 0.046 (10)* | |
H4B | 0.113 (4) | 0.348 (3) | 0.733 (5) | 0.043 (9)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Cd1 | 0.01370 (15) | 0.02211 (16) | 0.02355 (16) | 0.00007 (8) | −0.00117 (9) | −0.00150 (8) |
S1 | 0.0152 (3) | 0.0238 (3) | 0.0254 (3) | −0.0008 (2) | −0.0021 (2) | −0.0035 (2) |
N1 | 0.0181 (9) | 0.0241 (9) | 0.0305 (10) | 0.0004 (8) | −0.0018 (8) | −0.0032 (8) |
O1 | 0.0238 (9) | 0.0694 (14) | 0.0411 (11) | 0.0142 (9) | 0.0027 (8) | −0.0210 (10) |
O2 | 0.0327 (10) | 0.0345 (10) | 0.0475 (12) | −0.0032 (8) | −0.0070 (8) | 0.0145 (9) |
O3 | 0.0270 (9) | 0.0304 (9) | 0.0518 (11) | −0.0079 (7) | −0.0107 (8) | −0.0012 (9) |
C1 | 0.0191 (11) | 0.0197 (10) | 0.0301 (12) | 0.0014 (8) | −0.0016 (9) | −0.0018 (9) |
C2 | 0.0173 (10) | 0.0245 (11) | 0.0189 (10) | 0.0005 (8) | 0.0022 (8) | −0.0020 (8) |
C3 | 0.0231 (11) | 0.0207 (11) | 0.0391 (13) | −0.0044 (9) | 0.0049 (10) | −0.0049 (10) |
C4 | 0.0297 (13) | 0.0211 (11) | 0.0444 (15) | 0.0042 (10) | 0.0047 (11) | −0.0008 (10) |
C5 | 0.0187 (11) | 0.0296 (12) | 0.0313 (12) | 0.0056 (9) | −0.0001 (9) | −0.0007 (10) |
O4 | 0.0454 (11) | 0.0315 (10) | 0.0280 (10) | 0.0043 (9) | −0.0059 (8) | 0.0025 (8) |
Cd1—O4i | 2.2872 (18) | O1—Cd1iv | 2.3113 (17) |
Cd1—O4 | 2.2873 (18) | C1—C2 | 1.386 (3) |
Cd1—O1ii | 2.3113 (17) | C1—H1 | 0.9300 |
Cd1—O1iii | 2.3113 (17) | C2—C3 | 1.380 (3) |
Cd1—N1i | 2.3233 (18) | C3—C4 | 1.380 (4) |
Cd1—N1 | 2.3234 (18) | C3—H3 | 0.9300 |
S1—O3 | 1.4404 (18) | C4—C5 | 1.382 (3) |
S1—O2 | 1.4466 (19) | C4—H4 | 0.9300 |
S1—O1 | 1.4587 (19) | C5—H5 | 0.9300 |
S1—C2 | 1.779 (2) | O4—H4A | 0.81 (3) |
N1—C5 | 1.341 (3) | O4—H4B | 0.79 (3) |
N1—C1 | 1.344 (3) | ||
O4i—Cd1—O4 | 180 | C5—N1—Cd1 | 121.09 (15) |
O4i—Cd1—O1ii | 83.10 (8) | C1—N1—Cd1 | 120.36 (15) |
O4—Cd1—O1ii | 96.90 (8) | S1—O1—Cd1iv | 142.09 (12) |
O4i—Cd1—O1iii | 96.90 (8) | N1—C1—C2 | 122.1 (2) |
O4—Cd1—O1iii | 83.10 (8) | N1—C1—H1 | 119.0 |
O1ii—Cd1—O1iii | 180 | C2—C1—H1 | 119.0 |
O4i—Cd1—N1i | 89.62 (7) | C3—C2—C1 | 119.3 (2) |
O4—Cd1—N1i | 90.38 (7) | C3—C2—S1 | 121.48 (17) |
O1ii—Cd1—N1i | 84.76 (7) | C1—C2—S1 | 119.21 (17) |
O1iii—Cd1—N1i | 95.24 (7) | C4—C3—C2 | 118.8 (2) |
O4i—Cd1—N1 | 90.37 (7) | C4—C3—H3 | 120.6 |
O4—Cd1—N1 | 89.63 (7) | C2—C3—H3 | 120.6 |
O1ii—Cd1—N1 | 95.24 (7) | C3—C4—C5 | 118.9 (2) |
O1iii—Cd1—N1 | 84.76 (7) | C3—C4—H4 | 120.5 |
N1i—Cd1—N1 | 180 | C5—C4—H4 | 120.5 |
O3—S1—O2 | 113.30 (12) | N1—C5—C4 | 122.7 (2) |
O3—S1—O1 | 113.01 (13) | N1—C5—H5 | 118.6 |
O2—S1—O1 | 112.70 (13) | C4—C5—H5 | 118.6 |
O3—S1—C2 | 106.20 (11) | Cd1—O4—H4A | 122 (2) |
O2—S1—C2 | 106.70 (11) | Cd1—O4—H4B | 115 (2) |
O1—S1—C2 | 104.03 (10) | H4A—O4—H4B | 112 (3) |
C5—N1—C1 | 118.18 (19) | ||
O4i—Cd1—N1—C5 | 42.65 (19) | N1—C1—C2—S1 | −178.71 (18) |
O4—Cd1—N1—C5 | −137.35 (19) | O3—S1—C2—C3 | 8.3 (2) |
O1ii—Cd1—N1—C5 | −40.45 (19) | O2—S1—C2—C3 | 129.5 (2) |
O1iii—Cd1—N1—C5 | 139.55 (19) | O1—S1—C2—C3 | −111.2 (2) |
O4i—Cd1—N1—C1 | −130.30 (18) | O3—S1—C2—C1 | −173.02 (19) |
O4—Cd1—N1—C1 | 49.70 (18) | O2—S1—C2—C1 | −51.9 (2) |
O1ii—Cd1—N1—C1 | 146.60 (18) | O1—S1—C2—C1 | 67.5 (2) |
O1iii—Cd1—N1—C1 | −33.40 (18) | C1—C2—C3—C4 | 0.6 (4) |
O3—S1—O1—Cd1iv | 65.4 (2) | S1—C2—C3—C4 | 179.29 (19) |
O2—S1—O1—Cd1iv | −64.7 (2) | C2—C3—C4—C5 | −0.8 (4) |
C2—S1—O1—Cd1iv | −179.9 (2) | C1—N1—C5—C4 | 0.2 (4) |
C5—N1—C1—C2 | −0.4 (3) | Cd1—N1—C5—C4 | −172.90 (19) |
Cd1—N1—C1—C2 | 172.76 (16) | C3—C4—C5—N1 | 0.4 (4) |
N1—C1—C2—C3 | 0.0 (3) |
Symmetry codes: (i) −x, −y+1, −z+1; (ii) x−1, y, z; (iii) −x+1, −y+1, −z+1; (iv) x+1, y, z. |
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O3v | 0.93 | 2.39 | 3.256 (3) | 155 |
C4—H4···O2vi | 0.93 | 2.55 | 3.422 (3) | 157 |
O4—H4B···O3vii | 0.79 (3) | 1.99 (4) | 2.780 (3) | 176 (3) |
O4—H4A···O2viii | 0.81 (3) | 1.98 (3) | 2.773 (3) | 168 (3) |
Symmetry codes: (v) x−1, −y+3/2, z−1/2; (vi) −x+1, y+1/2, −z+3/2; (vii) −x+1, y−1/2, −z+3/2; (viii) −x+1, −y+1, −z+2. |
Experimental details
Crystal data | |
Chemical formula | [Cd(C5H4NO3S)2(H2O)2] |
Mr | 464.74 |
Crystal system, space group | Monoclinic, P21/c |
Temperature (K) | 294 |
a, b, c (Å) | 7.7480 (11), 13.264 (2), 7.3291 (11) |
β (°) | 97.081 (2) |
V (Å3) | 747.47 (19) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 1.78 |
Crystal size (mm) | 0.26 × 0.22 × 0.18 |
Data collection | |
Diffractometer | Bruker SMART CCD area-detector diffractometer |
Absorption correction | Multi-scan (SADABS; Bruker, 1998) |
Tmin, Tmax | 0.674, 0.740 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 4111, 1520, 1396 |
Rint | 0.023 |
(sin θ/λ)max (Å−1) | 0.623 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.021, 0.053, 1.10 |
No. of reflections | 1520 |
No. of parameters | 115 |
H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
Δρmax, Δρmin (e Å−3) | 0.42, −0.73 |
Computer programs: SMART (Bruker, 1998), SAINT (Bruker, 1998), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), SHELXTL (Sheldrick, 2008).
D—H···A | D—H | H···A | D···A | D—H···A |
C5—H5···O3i | 0.93 | 2.39 | 3.256 (3) | 155 |
C4—H4···O2ii | 0.93 | 2.55 | 3.422 (3) | 157 |
O4—H4B···O3iii | 0.79 (3) | 1.99 (4) | 2.780 (3) | 176 (3) |
O4—H4A···O2iv | 0.81 (3) | 1.98 (3) | 2.773 (3) | 168 (3) |
Symmetry codes: (i) x−1, −y+3/2, z−1/2; (ii) −x+1, y+1/2, −z+3/2; (iii) −x+1, y−1/2, −z+3/2; (iv) −x+1, −y+1, −z+2. |
Complexes or salts based on pyridinesulfonate are very rare in the Cambridge Structural Database (CSD; Version 5.25; Allen, 2002). A six-coordinate complex with pyridine-3-sulfonate ligands that is closely related to the title complex, (I), has been reported (Walsh & Hathaway, 1980). Other pyridine-3-sulfonate complexes are also available (Brodersen et al., 1980; Cotton et al., 1992a, b; Mäkinen et al., 2001; van der Lee & Barboiu, 2004), as well as that of the acid (Chandrasekhar, 1977).
In (I), Fig. 1, the Cd atom is located on a centre of inversion and is six-coordinated by two N atoms and two O atoms derived from four different pyridine-3-sulfonate molecules, and two O atoms derived from two water molecules. The resulting trans-N2O4 donor sets defines a distorted octahedral environment for Cd with angles ranging from 84.76 (7) to 180°, Cd—O distances in the range 2.2872 (18) to 2.3113 (17) Å, and Cd—N distances of 2.3233 (18) and 2.3234 (18) Å.
The molecules aggregate via bridging pyridine-3-sulfonate anions to form a chain. In the crystal structure, chains are linked into a 3-D architecture via hydrogen bonding interactions, Table 1 & Fig. 2.