





Supporting information
![]() | Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536813010696/tk5221sup1.cif |
![]() | Structure factor file (CIF format) https://doi.org/10.1107/S1600536813010696/tk5221Isup2.hkl |
CCDC reference: 954210
Key indicators
- Single-crystal X-ray study
- T = 150 K
- Mean
(C-C) = 0.006 Å
- R factor = 0.040
- wR factor = 0.097
- Data-to-parameter ratio = 21.2
checkCIF/PLATON results
No syntax errors found
Alert level A PLAT602_ALERT_2_A VERY LARGE Solvent Accessible VOID(S) in Structure !
Author Response: The structure contains large regions in which the solvent is not crystallographically determined (around 39% by volume). The electron density in this reagion was modelled using the SQUEEZE routine. |
Alert level B PLAT934_ALERT_3_B Number of (Iobs-Icalc)/SigmaW .gt. 10 Outliers . 1
Alert level C PLAT094_ALERT_2_C Ratio of Maximum / Minimum Residual Density .... 2.19
Author Response: The SQUEEZE routine is an imperfect way of dealing with disordered solvent. This alert is a consequence of unmodelled electron density. |
PLAT202_ALERT_3_C Isotropic non-H Atoms in Anion/Solvent ......... 8
Author Response: Some of the methanol was located in positions where it forms hydrogen bonds to the clusters. These molecules were located with moderate precision and it was not physically meaningful to model them using anisotropic displacement parameters. Similarly, hydrogen atoms were not added to these molecules. |
PLAT230_ALERT_2_C Hirshfeld Test Diff for C35 -- C36 .. 5.7 su PLAT242_ALERT_2_C Check Low Ueq as Compared to Neighbors for C43 PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O2M
Author Response: Some of the methanol was located in positions where it forms hydrogen bonds to the clusters. These molecules were located with moderate precision and it was not physically meaningful to model them using anisotropic displacement parameters. Similarly, hydrogen atoms were not added to these molecules. |
PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O3M
Author Response: Some of the methanol was located in positions where it forms hydrogen bonds to the clusters. These molecules were located with moderate precision and it was not physically meaningful to model them using anisotropic displacement parameters. Similarly, hydrogen atoms were not added to these molecules. |
PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O4M
Author Response: Some of the methanol was located in positions where it forms hydrogen bonds to the clusters. These molecules were located with moderate precision and it was not physically meaningful to model them using anisotropic displacement parameters. Similarly, hydrogen atoms were not added to these molecules. |
PLAT309_ALERT_2_C Single Bonded Oxygen (C-O .GT. 1.3 Ang) ........ O5M
Author Response: Some of the methanol was located in positions where it forms hydrogen bonds to the clusters. These molecules were located with moderate precision and it was not physically meaningful to model them using anisotropic displacement parameters. Similarly, hydrogen atoms were not added to these molecules. |
PLAT420_ALERT_2_C D-H Without Acceptor N2 - H2A ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT420_ALERT_2_C D-H Without Acceptor N2 - H2B ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT420_ALERT_2_C D-H Without Acceptor N3 - H3D ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT420_ALERT_2_C D-H Without Acceptor N4 - H4A ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT420_ALERT_2_C D-H Without Acceptor N5 - H5B ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT420_ALERT_2_C D-H Without Acceptor N6 - H6B ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT420_ALERT_2_C D-H Without Acceptor N6 - H6C ... ?
Author Response: This is entirely reasonable in chemical terms. The NH2 groups coordinate to the metal cations. Some of the hydrogen atoms attached to the nitrogen do not form hydrogen bonds. |
PLAT910_ALERT_3_C Missing # of FCF Reflections Below Th(Min) ..... 1 PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 1
Alert level G PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF ? PLAT007_ALERT_5_G Note: Number of Unrefined D-H Atoms ............ 18 PLAT033_ALERT_4_G Flack x Value Deviates .gt. 2*sigma from Zero .. 0.023 PLAT232_ALERT_2_G Hirshfeld Test Diff (M-X) Ni3 -- N5 .. 5.2 su PLAT344_ALERT_2_G Check sp? Angle Range in Solvent/Ion for ... C2M PLAT344_ALERT_2_G Check sp? Angle Range in Solvent/Ion for ... C3M PLAT344_ALERT_2_G Check sp? Angle Range in Solvent/Ion for ... C4M PLAT344_ALERT_2_G Check sp? Angle Range in Solvent/Ion for ... C5M PLAT720_ALERT_4_G Number of Unusual/Non-Standard Labels .......... 3 PLAT791_ALERT_4_G Note: The Model has Chirality at C2 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C11 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C20 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C29 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C38 (Verify) S PLAT791_ALERT_4_G Note: The Model has Chirality at C47 (Verify) S PLAT961_ALERT_5_G Dataset Contains no Negative Intensities ....... !
1 ALERT level A = Most likely a serious problem - resolve or explain 1 ALERT level B = A potentially serious problem, consider carefully 17 ALERT level C = Check. Ensure it is not caused by an omission or oversight 16 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 20 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 8 ALERT type 4 Improvement, methodology, query or suggestion 3 ALERT type 5 Informative message, check
Ni(NO3)2.6H2O (0.0148 g, 0.5 mmol; 98% Alfa Aesar) and 4-(HO)C6H4CH2CH(NH2)CO2H (L-tyrosine; 0.0185 g, 0.10 mmol; 98% Sigma-Aldrich) were dissolved in methanol (5.0 cm3; 99.8% Fisher Scientific) using a glass vial (vial A). A few drops of HCl (37% Fisher Scientific) were necessary to completely dissolve the L-Tyr. To a smaller glass vial, ca. 0.2 cm3 of (C2H5)3N (triethylamine; 99% Fisher Scientific) was added and the vial closed using lid with a small pin hole (vial B). Vial B was then inserted in vial A, which was then closed tightly. After ca 4 months, a few blue blocks crystallized from the solution, and were isolated for X-ray diffraction data collection.
The O-, N- and C-bound H-atoms were placed in calculated positions [O—H = 0.82 Å, N—H = 0.90 Å and C—H = 0.93 to 0.98 Å, Uiso(H) = 1.2–1.5Ueq(O, N and C)] and were included in the refinement in the riding model approximation. In order to take the contribution of the disordered methanol into account, the 'SQUEEZE option' in the program PLATON (Spek, 2009) was implemented. This resulted in an improvement of the R and wR from 0.073 and 0.212 to 0.040 and 0.097, respectively.
In the investigation of anti-bacterial and anti-fungal activities of the divalent metal complexes using (S)-2-amino-2-methyl-3-(4'-hydroxyphenyl)propanoic acid (L-tyrosine) under basic conditions, single crystals of [Ni3(C9H11NO3)6(OCH3)].4CH3OH (1) were prepared and isolated.
The asymmetric unit of 1 contains a neutral cluster of ninety-one non-hydrogen atoms comprising three Ni ions, six tyrosinate ligands, a methoxide ion and four methanol molecules (Fig. 1). The three Ni ions adopt similar octahedral coordination geometries, completed by two monodentate amino N atoms, one monodentate carboxylate O atom, two carboxylate bridging µ2-O atoms, and one bridging µ3-O atom of the methoxide ion: {Ni(µ1-O)(µ2-O)2(µ3-O)((µ1-N)2}. The six tyrosinate ligands exhibit the common chelating mode of coordination, using the amino N atoms and either the carboxylate µ2-η2:η0 O atoms (O4, O10, O16) or the carboxylate µ1-η1:η0 O atoms (O1, O7, O13). These generate two five-membered chelate rings about each Ni center. These coordination modes are commonly found in the tyrosinate ligands (Pei & Wang, 2006; Wojciechowska et al., 2011, 2012). Curiously, none of the phenolic groups of the tyrosine ligands within 1 are coordinated to the metal, despite conditions sufficiently basic to produce methoxide. The presence of the coordinated methoxide should invalidate any assumption on the presence of any extra-framework species with positive charges. The positive charge of Ni ions is therefore balanced by six tyrosinate ligands and one methoxide ion, resulting in the mean oxidation state of each nickel to be +2.33 (possibly a combination of two NiII and one NiIII). The solid conclusion may be derived by a magnetic study of 1.
The three {Ni(µ1-O)(µ2-O)2(µ3-O)((µ1-N)2} octahedra are condensed by edge-sharing and the addition of a µ3-OCH3 group (O1M) results in a trinuclear cluster with the {Ni3(µ1-O)(µ2-O)2(µ3-O)} incomplete cubane core (Fig. 2) (Ama et al., 2000; Lalia-Kantouri et al., 2010). Notably, the nickel ions present within the cluster must display a total positive charge of +7 to balanced the six tyrosinate ions and one methoxide ion. This corresponds to a mean oxidation state for the nickel of +2.33. The complete cubane core [Ni4O4] is rather well illustrated within the CSD (Allen, 2002) with over 100 examples. There are only 10 examples of the incomplete cubane core [Ni3O4]; the core within 1 is rather more symmetric than many of these examples. If the Ni atoms are taken as nodes, the{Ni3(µ1-O)(µ2-O)2(µ3-O)} core can be characterized as the 2-connected uninodal net of 2M3–1 topology with the vertex symbol [3] (Blatov, 2012).
The summation of the inner angles for each quadrilateral face of the {Ni3(µ1-O)(µ2-O)2(µ3-O)} core, i.e. {Ni1—O10—Ni2—O1M}, {Ni1—O4—Ni3—O1M} and {Ni2—O16—Ni3—O1M}, of ca. 360° suggest the planarity of these faces. Distributions of the Ni—µ3-O1M distances and the Ni—µ3-O1M—Ni angles in the ranges 2.067 (2) - 2.109 (2) Å and 97.17 (10) - 99.59 (10)°, respectively, imply an asymmetrical arrangement of the three Ni atoms about the apical µ3-O1M atom. This is also evident from the distances between any two Ni ions which vary within the range 3.132 (1) - 3.174 (1) Å. These relatively short distances between pairs of Ni cations may signal the presence of weak metallic bonds within 1. In nickel metal the Ni—Ni distance is 2.49 Å, while in the CSD Ni to Ni distances lie in the range 2.194 - 3.441 Å (Allen, 2002). The triangular arrangement of Ni ions within the cluster may also induce spin disorder and be associated with magnetic frustration. (Hendrickson et al., 2005; Lalia-Kantouri et al., 2010; Nakatsuji et al., 2005).
According to previous literature, three inter-ligand (intra-cluster) hydrogen bonding interactions of N—H···O type were reported to be important in stabilizing the incomplete cubane structure (Ama et al., 2000). This seems to be partially true for the {Ni3(µ1-O)(µ2-O)2(µ3-O)} core in 1, in which three N—H···O hydrogen bonding interactions, i.e. N3—H3C···O13, N4—H4B···O17 and N5—H5A···O1 [N···O 3.050 (5) - 3.251 (4) Å, N—H···O 142° - 150°], are present (Fig. 3). Atoms N1 and N5, in addition, reinforce the stability of the {Ni3(µ1-O)(µ2-O)2(µ3-O)} core via the inter-cluster interactions, i.e. N1—H1A···O15, N1—H1B···O18 and N5—H5A···O9 [N···O 3.042 (4) - 3.216 (4) Å, N—H···O 132.69° - 156.47°] (Fig. 4). The presence of the —CH2— group in the structure of the tyrosinate provides flexibility in spatial arrangement of the —(C6H4)OH part, depending on the surrounding environment. In the crystal structure of 1, the arrangement of these motifs is regulated by the strong O—H···O hydrogen bonding interactions (Fig. 4). The OH groups of all tyrosinate anions are associated in the O—H···O interactions with the neighboring clusters and methanol molecules [O—H···O 2.597 (4) - 2.983 (4) Å, O—H···O 122 - 173°], and these generate the supramolecular assembly in 1. The arrangement of these clusters occurs in such a way to maximize the hydrogen bonding interactions of which the weak hydrogen bonding of C—H···O type are also present, i.e. the intra-cluster C30—H30A···O11 and C54—H54···O5, and the inter-cluster C1M—H1M1···O1 and C38—H38···O9.
The clusters are arranged by the 21 screw axis into layers in the xz plane. These layers are stacked in an ABAB arrangement parallel to b. There exist hydrogen bonds between the clusters, both within the layers and between them. This packing arrangement of clusters is rather inefficient and the structure contains large voids centred on the origin such that approximately 39% of the structure is solvent accessible volume. Methanol molecules within these regions were poorly located and the reflection data were treated with the SQUEEZE algorithm (Spek, 2009) to model electron density within these regions. These calculations reveal that each void contains around 279 electrons consistent with around 17 molecules of methanol, giving an overall composition for 1 of [Ni3(C9H11NO3)6(OCH3)].21CH3OH. The methanol is lost very quickly when crystals are removed from solvent and this has prevented extensive analysis of the properties of 1.
The presence of methoxide suggests that it should be possible to obtain similar structures with other weakly coordinating anions. Similarly, replacement of method by other, bulkier and less volatile solvents, may enable further studies on similar compounds, in particular magnetic measurements. Clusters of this type therefore may be suitable for fundamental magnetic studies by variation of ligand bulk, or may prove suitable nodes in the construction of framework solids by appropriate ligand choice.
For related incomplete cubane clusters, see: Ama et al. (2000); Lalia-Kantouri et al. (2010). For a nickel complex with L-tyrosine, see Pei & Wang (2006). For structures with tyrosinate, see: Wojciechowska et al. (2011, 2012). For assignment of topology, see: Blatov (2012). For background to magnetic frustration, see: Hendrickson et al. (2005); Nakatsuji et al. (2005). For the CSD, see: Allen (2002).
Data collection: X-AREA (Stoe & Cie, 2002); cell refinement: X-AREA (Stoe & Cie, 2002); data reduction: X-AREA (Stoe & Cie, 2002); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: DIAMOND (Brandenburg, 2006); software used to prepare material for publication: publCIF (Westrip, 2010).
[Ni3(C9H10NO3)6(CH3O)]·4CH4O | F(000) = 1454 |
Mr = 1400.28 | Dx = 1.122 Mg m−3 |
Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
Hall symbol: P 2yb | Cell parameters from 3495 reflections |
a = 12.5688 (6) Å | θ = 1.6–28.3° |
b = 25.3381 (9) Å | µ = 0.74 mm−1 |
c = 13.1058 (7) Å | T = 150 K |
β = 96.740 (4)° | Block, light-blue |
V = 4145.0 (3) Å3 | 0.36 × 0.35 × 0.34 mm |
Z = 2 |
Stoe IPDS2 diffractometer | 16565 independent reflections |
Radiation source: fine-focus sealed tube | 11845 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.074 |
Detector resolution: 6.67 pixels mm-1 | θmax = 26.1°, θmin = 1.6° |
ω scans | h = −15→15 |
Absorption correction: analytical (a face-indexed absorption correction was applied using the Tompa method; Meulenaer de & Tompa, 1965) | k = −31→31 |
Tmin = 0.716, Tmax = 0.780 | l = −16→14 |
41350 measured reflections |
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.097 | w = 1/[σ2(Fo2) + (0.0444P)2] where P = (Fo2 + 2Fc2)/3 |
S = 0.88 | (Δ/σ)max = 0.002 |
16565 reflections | Δρmax = 0.83 e Å−3 |
780 parameters | Δρmin = −0.38 e Å−3 |
1 restraint | Absolute structure: Flack (1983), 8080 Friedel pairs |
Primary atom site location: structure-invariant direct methods | Absolute structure parameter: 0.023 (9) |
[Ni3(C9H10NO3)6(CH3O)]·4CH4O | V = 4145.0 (3) Å3 |
Mr = 1400.28 | Z = 2 |
Monoclinic, P21 | Mo Kα radiation |
a = 12.5688 (6) Å | µ = 0.74 mm−1 |
b = 25.3381 (9) Å | T = 150 K |
c = 13.1058 (7) Å | 0.36 × 0.35 × 0.34 mm |
β = 96.740 (4)° |
Stoe IPDS2 diffractometer | 16565 independent reflections |
Absorption correction: analytical (a face-indexed absorption correction was applied using the Tompa method; Meulenaer de & Tompa, 1965) | 11845 reflections with I > 2σ(I) |
Tmin = 0.716, Tmax = 0.780 | Rint = 0.074 |
41350 measured reflections |
R[F2 > 2σ(F2)] = 0.040 | H-atom parameters constrained |
wR(F2) = 0.097 | Δρmax = 0.83 e Å−3 |
S = 0.88 | Δρmin = −0.38 e Å−3 |
16565 reflections | Absolute structure: Flack (1983), 8080 Friedel pairs |
780 parameters | Absolute structure parameter: 0.023 (9) |
1 restraint |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Ni1 | 0.67401 (3) | 0.209152 (16) | 0.66058 (4) | 0.03463 (11) | |
O1M | 0.64605 (17) | 0.28831 (10) | 0.62163 (19) | 0.0350 (5) | |
N1 | 0.7077 (2) | 0.21031 (14) | 0.8182 (2) | 0.0432 (7) | |
H1A | 0.6691 | 0.2359 | 0.8440 | 0.052* | |
H1B | 0.6884 | 0.1793 | 0.8439 | 0.052* | |
O1 | 0.83540 (19) | 0.22349 (9) | 0.6684 (2) | 0.0369 (6) | |
C1 | 0.8803 (3) | 0.23246 (14) | 0.7588 (3) | 0.0404 (9) | |
O2 | 0.9740 (2) | 0.25142 (11) | 0.7761 (2) | 0.0483 (7) | |
C2 | 0.8238 (3) | 0.21973 (14) | 0.8507 (3) | 0.0426 (9) | |
H2 | 0.8296 | 0.2507 | 0.8958 | 0.051* | |
C3 | 0.8785 (3) | 0.17307 (16) | 0.9118 (3) | 0.0477 (10) | |
H3A | 0.9498 | 0.1841 | 0.9403 | 0.057* | |
H3B | 0.8385 | 0.1655 | 0.9691 | 0.057* | |
C4 | 0.8886 (3) | 0.12271 (16) | 0.8527 (3) | 0.0478 (10) | |
C5 | 0.9647 (3) | 0.11715 (17) | 0.7819 (4) | 0.0558 (11) | |
H5 | 1.0082 | 0.1459 | 0.7713 | 0.067* | |
C6 | 0.9773 (4) | 0.07274 (18) | 0.7297 (4) | 0.0614 (12) | |
H6 | 1.0295 | 0.0707 | 0.6851 | 0.074* | |
C7 | 0.9103 (4) | 0.02862 (17) | 0.7426 (4) | 0.0590 (12) | |
C8 | 0.8360 (4) | 0.03291 (17) | 0.8129 (4) | 0.0612 (13) | |
H8 | 0.7916 | 0.0046 | 0.8234 | 0.073* | |
C9 | 0.8280 (3) | 0.07957 (17) | 0.8676 (4) | 0.0567 (11) | |
H9 | 0.7795 | 0.0813 | 0.9159 | 0.068* | |
O3 | 0.9161 (3) | −0.01815 (12) | 0.6914 (3) | 0.0763 (10) | |
H3 | 0.9644 | −0.0166 | 0.6545 | 0.114* | |
N2 | 0.6949 (2) | 0.12825 (11) | 0.6396 (3) | 0.0416 (8) | |
H2A | 0.7321 | 0.1140 | 0.6957 | 0.050* | |
H2B | 0.6310 | 0.1120 | 0.6282 | 0.050* | |
O4 | 0.66026 (18) | 0.20168 (9) | 0.5025 (2) | 0.0370 (6) | |
C10 | 0.7201 (3) | 0.16670 (13) | 0.4722 (3) | 0.0363 (9) | |
O5 | 0.7561 (2) | 0.16689 (11) | 0.3872 (2) | 0.0455 (6) | |
C11 | 0.7544 (3) | 0.12247 (13) | 0.5498 (3) | 0.0405 (9) | |
H11 | 0.8301 | 0.1285 | 0.5743 | 0.049* | |
C12 | 0.7462 (3) | 0.06642 (14) | 0.5046 (4) | 0.0524 (11) | |
H12A | 0.7801 | 0.0660 | 0.4418 | 0.063* | |
H12B | 0.7859 | 0.0425 | 0.5527 | 0.063* | |
C13 | 0.6346 (3) | 0.04650 (13) | 0.4814 (3) | 0.0420 (9) | |
C14 | 0.5666 (3) | 0.06193 (14) | 0.3962 (4) | 0.0467 (10) | |
H14 | 0.5922 | 0.0858 | 0.3509 | 0.056* | |
C15 | 0.4626 (3) | 0.04394 (14) | 0.3745 (4) | 0.0473 (10) | |
H15 | 0.4191 | 0.0556 | 0.3166 | 0.057* | |
C16 | 0.4246 (3) | 0.00790 (15) | 0.4418 (3) | 0.0476 (10) | |
C17 | 0.4897 (3) | −0.00772 (15) | 0.5270 (3) | 0.0469 (10) | |
H17 | 0.4648 | −0.0318 | 0.5723 | 0.056* | |
C18 | 0.5934 (3) | 0.01222 (16) | 0.5464 (3) | 0.0501 (10) | |
H18 | 0.6360 | 0.0018 | 0.6059 | 0.060* | |
O6 | 0.3242 (2) | −0.01120 (10) | 0.4159 (2) | 0.0552 (8) | |
H6A | 0.3093 | −0.0318 | 0.4604 | 0.083* | |
Ni2 | 0.48220 (3) | 0.291099 (15) | 0.62530 (4) | 0.03586 (11) | |
N3 | 0.4712 (2) | 0.37166 (11) | 0.6007 (2) | 0.0358 (7) | |
H3C | 0.5228 | 0.3820 | 0.5629 | 0.043* | |
H3D | 0.4074 | 0.3794 | 0.5653 | 0.043* | |
O7 | 0.4971 (2) | 0.31369 (9) | 0.7749 (2) | 0.0407 (6) | |
C19 | 0.5061 (3) | 0.36282 (14) | 0.7897 (3) | 0.0404 (9) | |
O8 | 0.5333 (3) | 0.38163 (11) | 0.8774 (2) | 0.0601 (8) | |
C20 | 0.4830 (3) | 0.40097 (13) | 0.7005 (3) | 0.0368 (8) | |
H20 | 0.5445 | 0.4248 | 0.7010 | 0.044* | |
C21 | 0.3828 (3) | 0.43479 (14) | 0.7125 (3) | 0.0423 (9) | |
H21A | 0.3888 | 0.4487 | 0.7819 | 0.051* | |
H21B | 0.3813 | 0.4645 | 0.6658 | 0.051* | |
C22 | 0.2789 (3) | 0.40506 (13) | 0.6917 (3) | 0.0390 (9) | |
C23 | 0.2428 (3) | 0.37308 (15) | 0.7650 (3) | 0.0451 (9) | |
H23 | 0.2813 | 0.3720 | 0.8301 | 0.054* | |
C24 | 0.1507 (3) | 0.34206 (15) | 0.7456 (3) | 0.0434 (9) | |
H24 | 0.1278 | 0.3210 | 0.7969 | 0.052* | |
C25 | 0.0942 (3) | 0.34335 (15) | 0.6479 (3) | 0.0428 (9) | |
C26 | 0.1283 (3) | 0.37557 (17) | 0.5735 (4) | 0.0528 (11) | |
H26 | 0.0900 | 0.3769 | 0.5084 | 0.063* | |
C27 | 0.2194 (3) | 0.40591 (15) | 0.5956 (4) | 0.0479 (10) | |
H27 | 0.2415 | 0.4275 | 0.5447 | 0.058* | |
O9 | 0.0065 (2) | 0.31212 (11) | 0.6231 (2) | 0.0548 (7) | |
H9A | −0.0056 | 0.2951 | 0.6737 | 0.082* | |
N4 | 0.3258 (2) | 0.26513 (11) | 0.6264 (3) | 0.0389 (7) | |
H4A | 0.2840 | 0.2915 | 0.6447 | 0.047* | |
H4B | 0.2991 | 0.2535 | 0.5637 | 0.047* | |
O10 | 0.50697 (18) | 0.21246 (10) | 0.6586 (2) | 0.0396 (6) | |
C28 | 0.4328 (3) | 0.18951 (14) | 0.6989 (3) | 0.0360 (8) | |
O11 | 0.4391 (2) | 0.14462 (10) | 0.7387 (2) | 0.0448 (6) | |
C29 | 0.3300 (3) | 0.22191 (14) | 0.7017 (3) | 0.0394 (9) | |
H29 | 0.3360 | 0.2387 | 0.7695 | 0.047* | |
C30 | 0.2260 (3) | 0.18813 (15) | 0.6932 (3) | 0.0425 (9) | |
H30A | 0.2380 | 0.1583 | 0.7394 | 0.051* | |
H30B | 0.1693 | 0.2093 | 0.7166 | 0.051* | |
C31 | 0.1882 (3) | 0.16788 (15) | 0.5888 (3) | 0.0462 (10) | |
C32 | 0.0857 (3) | 0.18068 (18) | 0.5424 (4) | 0.0610 (13) | |
H32 | 0.0437 | 0.2038 | 0.5756 | 0.073* | |
C33 | 0.0455 (4) | 0.16009 (19) | 0.4494 (4) | 0.0635 (13) | |
H33 | −0.0248 | 0.1676 | 0.4228 | 0.076* | |
C34 | 0.1067 (4) | 0.1288 (2) | 0.3951 (4) | 0.0661 (13) | |
C35 | 0.2115 (4) | 0.1169 (2) | 0.4365 (5) | 0.0740 (16) | |
H35 | 0.2556 | 0.0973 | 0.3986 | 0.089* | |
C36 | 0.2488 (3) | 0.13418 (18) | 0.5326 (4) | 0.0577 (12) | |
H36 | 0.3163 | 0.1234 | 0.5618 | 0.069* | |
O12 | 0.0715 (3) | 0.10594 (17) | 0.3024 (3) | 0.0922 (12) | |
H12 | 0.0108 | 0.1164 | 0.2828 | 0.138* | |
Ni3 | 0.64300 (3) | 0.280740 (15) | 0.46105 (4) | 0.03642 (11) | |
N5 | 0.8050 (2) | 0.28923 (12) | 0.4539 (2) | 0.0386 (7) | |
H5A | 0.8411 | 0.2779 | 0.5133 | 0.046* | |
H5B | 0.8243 | 0.2689 | 0.4029 | 0.046* | |
O13 | 0.64711 (19) | 0.36165 (10) | 0.4467 (2) | 0.0436 (7) | |
C37 | 0.7391 (3) | 0.38049 (14) | 0.4409 (3) | 0.0422 (9) | |
O14 | 0.7563 (2) | 0.42996 (10) | 0.4409 (3) | 0.0553 (8) | |
C38 | 0.8346 (3) | 0.34438 (14) | 0.4360 (3) | 0.0437 (10) | |
H38 | 0.8876 | 0.3543 | 0.4937 | 0.052* | |
C39 | 0.8885 (3) | 0.35072 (18) | 0.3408 (4) | 0.0565 (11) | |
H39A | 0.9092 | 0.3874 | 0.3347 | 0.068* | |
H39B | 0.9534 | 0.3297 | 0.3476 | 0.068* | |
C40 | 0.8211 (3) | 0.33499 (17) | 0.2459 (4) | 0.0558 (11) | |
C41 | 0.7431 (4) | 0.3691 (2) | 0.1951 (4) | 0.0692 (14) | |
H41 | 0.7337 | 0.4022 | 0.2234 | 0.083* | |
C42 | 0.6809 (4) | 0.3557 (2) | 0.1066 (4) | 0.0690 (13) | |
H42 | 0.6305 | 0.3795 | 0.0763 | 0.083* | |
C43 | 0.6922 (3) | 0.30699 (17) | 0.0614 (3) | 0.0530 (11) | |
C44 | 0.7645 (4) | 0.27061 (18) | 0.1084 (3) | 0.0602 (12) | |
H44 | 0.7697 | 0.2370 | 0.0807 | 0.072* | |
C45 | 0.8300 (3) | 0.2852 (2) | 0.1989 (3) | 0.0555 (10) | |
H45 | 0.8807 | 0.2613 | 0.2285 | 0.067* | |
O15 | 0.6373 (3) | 0.29244 (14) | −0.0297 (2) | 0.0757 (9) | |
H15A | 0.5968 | 0.3163 | −0.0512 | 0.114* | |
N6 | 0.5834 (3) | 0.26790 (13) | 0.3064 (3) | 0.0452 (8) | |
H6B | 0.5877 | 0.2980 | 0.2706 | 0.054* | |
H6C | 0.6232 | 0.2432 | 0.2793 | 0.054* | |
O16 | 0.48472 (19) | 0.27843 (10) | 0.4722 (2) | 0.0409 (6) | |
C46 | 0.4195 (3) | 0.26377 (15) | 0.3922 (3) | 0.0444 (9) | |
O17 | 0.3229 (2) | 0.26011 (14) | 0.3935 (3) | 0.0698 (9) | |
C47 | 0.4695 (3) | 0.25007 (15) | 0.2987 (3) | 0.0442 (9) | |
H47 | 0.4292 | 0.2676 | 0.2395 | 0.053* | |
C48 | 0.4619 (3) | 0.18945 (15) | 0.2818 (3) | 0.0463 (10) | |
H48A | 0.5085 | 0.1722 | 0.3361 | 0.056* | |
H48B | 0.3891 | 0.1783 | 0.2880 | 0.056* | |
C49 | 0.4916 (3) | 0.17103 (14) | 0.1804 (3) | 0.0416 (9) | |
C50 | 0.4162 (3) | 0.17076 (15) | 0.0914 (3) | 0.0483 (10) | |
H50 | 0.3466 | 0.1820 | 0.0961 | 0.058* | |
C51 | 0.4432 (3) | 0.15440 (15) | −0.0011 (3) | 0.0452 (9) | |
H51 | 0.3914 | 0.1545 | −0.0580 | 0.054* | |
C52 | 0.5463 (3) | 0.13756 (15) | −0.0125 (3) | 0.0435 (9) | |
C53 | 0.6209 (3) | 0.13709 (17) | 0.0737 (3) | 0.0522 (11) | |
H53 | 0.6900 | 0.1252 | 0.0684 | 0.063* | |
C54 | 0.5945 (3) | 0.15397 (16) | 0.1677 (3) | 0.0481 (10) | |
H54 | 0.6469 | 0.1539 | 0.2240 | 0.058* | |
O18 | 0.5789 (2) | 0.12088 (11) | −0.1018 (2) | 0.0493 (7) | |
H18A | 0.5288 | 0.1227 | −0.1478 | 0.074* | |
O3M | 1.0553 (3) | −0.02010 (15) | 0.5593 (3) | 0.0815 (10)* | |
C1M | 0.7126 (3) | 0.32667 (13) | 0.6751 (3) | 0.0384 (9) | |
H1M1 | 0.7859 | 0.3200 | 0.6652 | 0.058* | |
H1M2 | 0.7049 | 0.3250 | 0.7470 | 0.058* | |
H1M3 | 0.6923 | 0.3611 | 0.6492 | 0.058* | |
O2M | 0.8596 (5) | 0.1098 (2) | 0.2522 (4) | 0.1298 (17)* | |
C3M | 1.0306 (5) | 0.0038 (3) | 0.4648 (5) | 0.0954 (18)* | |
C2M | 0.8170 (8) | 0.0539 (4) | 0.2325 (7) | 0.140 (3)* | |
O4M | 0.6264 (6) | 0.4805 (3) | 0.9009 (6) | 0.177 (3)* | |
C4M | 0.5490 (9) | 0.5181 (5) | 0.9249 (9) | 0.172 (4)* | |
O5M | 0.3634 (7) | 0.3045 (4) | 1.0147 (6) | 0.215 (3)* | |
C5M | 0.2700 (8) | 0.3219 (4) | 1.0342 (7) | 0.142 (3)* |
U11 | U22 | U33 | U12 | U13 | U23 | |
Ni1 | 0.0304 (2) | 0.0249 (2) | 0.0472 (3) | −0.00070 (19) | −0.0011 (2) | −0.0033 (2) |
O1M | 0.0297 (11) | 0.0255 (12) | 0.0488 (14) | −0.0037 (11) | −0.0001 (11) | −0.0059 (13) |
N1 | 0.0360 (15) | 0.0412 (16) | 0.053 (2) | −0.0085 (15) | 0.0067 (14) | −0.0080 (17) |
O1 | 0.0336 (12) | 0.0317 (13) | 0.0440 (16) | −0.0004 (10) | −0.0013 (12) | −0.0034 (11) |
C1 | 0.0353 (19) | 0.0343 (18) | 0.050 (3) | −0.0008 (16) | −0.0009 (19) | −0.0015 (18) |
O2 | 0.0377 (14) | 0.0554 (16) | 0.0489 (18) | −0.0156 (12) | −0.0075 (12) | 0.0015 (13) |
C2 | 0.0403 (18) | 0.039 (2) | 0.048 (2) | −0.0038 (16) | 0.0012 (17) | −0.0046 (17) |
C3 | 0.043 (2) | 0.053 (2) | 0.047 (3) | −0.0058 (18) | 0.0026 (19) | 0.005 (2) |
C4 | 0.044 (2) | 0.045 (2) | 0.052 (3) | 0.0069 (18) | −0.0030 (19) | 0.0143 (19) |
C5 | 0.048 (2) | 0.051 (2) | 0.066 (3) | 0.001 (2) | −0.001 (2) | 0.016 (2) |
C6 | 0.061 (3) | 0.060 (3) | 0.065 (3) | 0.022 (2) | 0.014 (2) | 0.008 (2) |
C7 | 0.062 (3) | 0.043 (2) | 0.072 (3) | 0.015 (2) | 0.007 (2) | 0.014 (2) |
C8 | 0.068 (3) | 0.039 (2) | 0.079 (4) | 0.011 (2) | 0.018 (3) | 0.014 (2) |
C9 | 0.043 (2) | 0.054 (2) | 0.075 (3) | 0.0042 (19) | 0.016 (2) | 0.011 (2) |
O3 | 0.092 (2) | 0.0403 (16) | 0.098 (3) | 0.0149 (17) | 0.017 (2) | −0.0075 (17) |
N2 | 0.0390 (16) | 0.0276 (15) | 0.055 (2) | −0.0005 (13) | −0.0062 (16) | 0.0028 (15) |
O4 | 0.0306 (12) | 0.0285 (13) | 0.0505 (16) | −0.0010 (10) | −0.0018 (11) | −0.0048 (12) |
C10 | 0.0255 (16) | 0.0301 (17) | 0.049 (3) | −0.0015 (14) | −0.0118 (17) | −0.0123 (17) |
O5 | 0.0422 (14) | 0.0469 (15) | 0.0460 (18) | 0.0047 (12) | −0.0009 (13) | −0.0061 (13) |
C11 | 0.0377 (19) | 0.0246 (16) | 0.057 (3) | 0.0008 (15) | −0.0040 (18) | −0.0050 (17) |
C12 | 0.047 (2) | 0.0325 (19) | 0.074 (3) | 0.0084 (17) | −0.009 (2) | −0.012 (2) |
C13 | 0.044 (2) | 0.0233 (17) | 0.056 (3) | 0.0032 (15) | −0.004 (2) | −0.0103 (17) |
C14 | 0.045 (2) | 0.0256 (17) | 0.069 (3) | 0.0033 (16) | 0.003 (2) | −0.0084 (18) |
C15 | 0.039 (2) | 0.0322 (19) | 0.067 (3) | 0.0031 (16) | −0.009 (2) | −0.0080 (19) |
C16 | 0.046 (2) | 0.0349 (19) | 0.061 (3) | 0.0006 (17) | 0.001 (2) | −0.0070 (19) |
C17 | 0.056 (2) | 0.0332 (19) | 0.051 (3) | −0.0023 (18) | 0.001 (2) | −0.0068 (18) |
C18 | 0.049 (2) | 0.042 (2) | 0.055 (3) | 0.0013 (18) | −0.013 (2) | −0.004 (2) |
O6 | 0.0456 (15) | 0.0383 (14) | 0.079 (2) | −0.0074 (12) | −0.0034 (15) | −0.0070 (14) |
Ni2 | 0.0298 (2) | 0.0241 (2) | 0.0525 (3) | −0.00098 (18) | 0.0001 (2) | −0.0018 (2) |
N3 | 0.0310 (15) | 0.0288 (15) | 0.046 (2) | 0.0016 (12) | −0.0017 (14) | 0.0017 (14) |
O7 | 0.0397 (13) | 0.0277 (12) | 0.0528 (17) | −0.0013 (10) | −0.0032 (12) | 0.0049 (11) |
C19 | 0.0345 (18) | 0.035 (2) | 0.049 (3) | −0.0052 (15) | −0.0072 (18) | 0.0006 (18) |
O8 | 0.087 (2) | 0.0409 (14) | 0.0453 (18) | −0.0113 (15) | −0.0201 (16) | −0.0072 (14) |
C20 | 0.0369 (19) | 0.0251 (16) | 0.047 (2) | −0.0045 (15) | −0.0018 (17) | −0.0022 (16) |
C21 | 0.040 (2) | 0.0293 (17) | 0.055 (3) | −0.0007 (15) | −0.0047 (18) | −0.0007 (17) |
C22 | 0.0329 (18) | 0.0289 (17) | 0.055 (3) | 0.0049 (15) | 0.0039 (18) | 0.0020 (17) |
C23 | 0.038 (2) | 0.049 (2) | 0.047 (3) | −0.0048 (17) | 0.0014 (19) | 0.0023 (19) |
C24 | 0.0348 (18) | 0.048 (2) | 0.046 (2) | −0.0067 (17) | 0.0018 (18) | 0.0051 (18) |
C25 | 0.0280 (17) | 0.046 (2) | 0.054 (3) | 0.0023 (16) | 0.0039 (18) | 0.0057 (19) |
C26 | 0.036 (2) | 0.054 (2) | 0.065 (3) | 0.0026 (18) | −0.009 (2) | 0.025 (2) |
C27 | 0.038 (2) | 0.041 (2) | 0.063 (3) | 0.0026 (17) | 0.001 (2) | 0.017 (2) |
O9 | 0.0318 (13) | 0.0611 (17) | 0.069 (2) | −0.0089 (12) | −0.0054 (13) | 0.0149 (15) |
N4 | 0.0329 (15) | 0.0278 (14) | 0.056 (2) | −0.0001 (12) | 0.0029 (14) | −0.0076 (14) |
O10 | 0.0294 (11) | 0.0236 (11) | 0.0647 (18) | −0.0029 (11) | 0.0007 (12) | 0.0042 (13) |
C28 | 0.0399 (19) | 0.0334 (18) | 0.032 (2) | −0.0048 (15) | −0.0058 (16) | −0.0072 (16) |
O11 | 0.0424 (14) | 0.0324 (13) | 0.0554 (18) | −0.0034 (11) | −0.0123 (13) | 0.0062 (12) |
C29 | 0.0352 (18) | 0.041 (2) | 0.041 (2) | −0.0084 (15) | −0.0010 (16) | −0.0060 (16) |
C30 | 0.0379 (19) | 0.0405 (19) | 0.048 (3) | −0.0036 (16) | −0.0008 (18) | 0.0030 (18) |
C31 | 0.038 (2) | 0.0355 (19) | 0.063 (3) | −0.0091 (17) | −0.001 (2) | −0.0093 (19) |
C32 | 0.049 (2) | 0.059 (3) | 0.071 (3) | 0.015 (2) | −0.010 (2) | −0.023 (2) |
C33 | 0.051 (2) | 0.057 (3) | 0.082 (4) | 0.006 (2) | 0.001 (3) | −0.014 (3) |
C34 | 0.060 (3) | 0.068 (3) | 0.067 (3) | 0.003 (2) | −0.009 (2) | −0.021 (3) |
C35 | 0.050 (3) | 0.064 (3) | 0.106 (4) | 0.004 (2) | 0.001 (3) | −0.040 (3) |
C36 | 0.033 (2) | 0.059 (3) | 0.077 (3) | 0.0037 (19) | −0.011 (2) | −0.029 (2) |
O12 | 0.081 (3) | 0.101 (3) | 0.090 (3) | 0.010 (2) | −0.006 (2) | −0.033 (2) |
Ni3 | 0.0310 (2) | 0.0278 (2) | 0.0490 (3) | −0.00175 (18) | −0.0016 (2) | −0.0004 (2) |
N5 | 0.0376 (15) | 0.0345 (15) | 0.0420 (17) | 0.0044 (15) | −0.0027 (13) | −0.0044 (15) |
O13 | 0.0316 (13) | 0.0301 (13) | 0.067 (2) | −0.0019 (11) | −0.0009 (13) | 0.0051 (13) |
C37 | 0.044 (2) | 0.0297 (18) | 0.052 (3) | −0.0033 (16) | 0.0003 (19) | 0.0033 (17) |
O14 | 0.0427 (15) | 0.0307 (13) | 0.091 (2) | −0.0059 (12) | 0.0022 (15) | 0.0084 (14) |
C38 | 0.0322 (18) | 0.0358 (19) | 0.064 (3) | −0.0066 (15) | 0.0073 (19) | −0.0021 (18) |
C39 | 0.051 (2) | 0.051 (2) | 0.068 (3) | −0.008 (2) | 0.008 (2) | −0.003 (2) |
C40 | 0.040 (2) | 0.053 (3) | 0.074 (3) | −0.0022 (19) | 0.009 (2) | 0.008 (2) |
C41 | 0.077 (3) | 0.060 (3) | 0.068 (4) | 0.013 (3) | −0.004 (3) | 0.011 (3) |
C42 | 0.078 (3) | 0.060 (3) | 0.064 (3) | 0.022 (3) | −0.011 (3) | 0.004 (3) |
C43 | 0.052 (2) | 0.063 (3) | 0.040 (2) | 0.010 (2) | −0.007 (2) | 0.008 (2) |
C44 | 0.073 (3) | 0.055 (3) | 0.052 (3) | 0.023 (2) | 0.003 (2) | −0.001 (2) |
C45 | 0.054 (2) | 0.062 (3) | 0.049 (2) | 0.008 (2) | 0.0030 (19) | 0.004 (2) |
O15 | 0.084 (2) | 0.072 (2) | 0.065 (2) | 0.028 (2) | −0.0147 (17) | −0.0137 (19) |
N6 | 0.0452 (17) | 0.0402 (17) | 0.048 (2) | −0.0112 (14) | −0.0028 (15) | 0.0045 (15) |
O16 | 0.0355 (12) | 0.0340 (14) | 0.0521 (16) | −0.0046 (12) | 0.0008 (12) | −0.0027 (13) |
C46 | 0.0300 (19) | 0.045 (2) | 0.054 (3) | −0.0014 (16) | −0.0109 (18) | 0.0026 (19) |
O17 | 0.0342 (16) | 0.100 (3) | 0.071 (2) | −0.0017 (15) | −0.0130 (14) | 0.0005 (19) |
C47 | 0.042 (2) | 0.044 (2) | 0.043 (3) | −0.0003 (17) | −0.0103 (18) | 0.0034 (18) |
C48 | 0.043 (2) | 0.043 (2) | 0.050 (3) | −0.0106 (17) | −0.0079 (19) | 0.0107 (19) |
C49 | 0.042 (2) | 0.0322 (18) | 0.048 (2) | −0.0059 (16) | −0.0057 (18) | 0.0027 (17) |
C50 | 0.0361 (19) | 0.045 (2) | 0.061 (3) | −0.0011 (17) | −0.0061 (19) | 0.000 (2) |
C51 | 0.040 (2) | 0.051 (2) | 0.040 (2) | −0.0015 (17) | −0.0104 (18) | 0.0021 (19) |
C52 | 0.043 (2) | 0.043 (2) | 0.044 (2) | −0.0086 (17) | 0.0039 (19) | 0.0094 (18) |
C53 | 0.041 (2) | 0.056 (2) | 0.056 (3) | −0.0042 (19) | −0.009 (2) | 0.019 (2) |
C54 | 0.039 (2) | 0.059 (3) | 0.044 (3) | −0.0040 (19) | −0.0073 (19) | 0.007 (2) |
O18 | 0.0405 (14) | 0.0566 (16) | 0.0477 (18) | −0.0053 (13) | −0.0080 (13) | 0.0044 (14) |
C1M | 0.0333 (17) | 0.0302 (18) | 0.051 (2) | −0.0019 (15) | 0.0035 (17) | −0.0046 (17) |
Ni1—O1 | 2.051 (2) | C27—H27 | 0.9300 |
Ni1—N1 | 2.060 (3) | O9—H9A | 0.8200 |
Ni1—O4 | 2.067 (3) | N4—C29 | 1.471 (5) |
Ni1—N2 | 2.089 (3) | N4—H4A | 0.9000 |
Ni1—O1M | 2.089 (3) | N4—H4B | 0.9000 |
Ni1—O10 | 2.098 (2) | O10—C28 | 1.265 (4) |
O1M—C1M | 1.413 (4) | C28—O11 | 1.250 (4) |
O1M—Ni2 | 2.067 (2) | C28—C29 | 1.535 (5) |
O1M—Ni3 | 2.109 (2) | C29—C30 | 1.556 (5) |
N1—C2 | 1.490 (5) | C29—H29 | 0.9800 |
N1—H1A | 0.9000 | C30—C31 | 1.486 (6) |
N1—H1B | 0.9000 | C30—H30A | 0.9700 |
O1—C1 | 1.272 (5) | C30—H30B | 0.9700 |
C1—O2 | 1.268 (4) | C31—C32 | 1.397 (6) |
C1—C2 | 1.504 (5) | C31—C36 | 1.409 (6) |
C2—C3 | 1.544 (5) | C32—C33 | 1.367 (6) |
C2—H2 | 0.9800 | C32—H32 | 0.9300 |
C3—C4 | 1.506 (6) | C33—C34 | 1.362 (6) |
C3—H3A | 0.9700 | C33—H33 | 0.9300 |
C3—H3B | 0.9700 | C34—O12 | 1.371 (6) |
C4—C9 | 1.360 (6) | C34—C35 | 1.397 (7) |
C4—C5 | 1.415 (6) | C35—C36 | 1.363 (7) |
C5—C6 | 1.336 (6) | C35—H35 | 0.9300 |
C5—H5 | 0.9300 | C36—H36 | 0.9300 |
C6—C7 | 1.421 (6) | O12—H12 | 0.8200 |
C6—H6 | 0.9300 | Ni3—O16 | 2.013 (2) |
C7—O3 | 1.368 (5) | Ni3—O13 | 2.060 (3) |
C7—C8 | 1.392 (6) | Ni3—N5 | 2.060 (3) |
C8—C9 | 1.392 (6) | Ni3—N6 | 2.102 (3) |
C8—H8 | 0.9300 | N5—C38 | 1.472 (5) |
C9—H9 | 0.9300 | N5—H5A | 0.9000 |
O3—H3 | 0.8200 | N5—H5B | 0.9000 |
N2—C11 | 1.473 (5) | O13—C37 | 1.261 (4) |
N2—H2A | 0.9000 | C37—O14 | 1.272 (4) |
N2—H2B | 0.9000 | C37—C38 | 1.517 (5) |
O4—C10 | 1.256 (4) | C38—C39 | 1.497 (6) |
O4—Ni3 | 2.080 (2) | C38—H38 | 0.9800 |
C10—O5 | 1.251 (4) | C39—C40 | 1.475 (7) |
C10—C11 | 1.541 (5) | C39—H39A | 0.9700 |
C11—C12 | 1.538 (5) | C39—H39B | 0.9700 |
C11—H11 | 0.9800 | C40—C41 | 1.413 (7) |
C12—C13 | 1.488 (5) | C40—C45 | 1.414 (7) |
C12—H12A | 0.9700 | C41—C42 | 1.363 (7) |
C12—H12B | 0.9700 | C41—H41 | 0.9300 |
C13—C18 | 1.361 (6) | C42—C43 | 1.383 (7) |
C13—C14 | 1.381 (6) | C42—H42 | 0.9300 |
C14—C15 | 1.382 (5) | C43—O15 | 1.358 (5) |
C14—H14 | 0.9300 | C43—C44 | 1.387 (6) |
C15—C16 | 1.392 (6) | C44—C45 | 1.411 (6) |
C15—H15 | 0.9300 | C44—H44 | 0.9300 |
C16—O6 | 1.356 (5) | C45—H45 | 0.9300 |
C16—C17 | 1.364 (6) | O15—H15A | 0.8200 |
C17—C18 | 1.393 (6) | N6—C47 | 1.494 (5) |
C17—H17 | 0.9300 | N6—H6B | 0.9000 |
C18—H18 | 0.9300 | N6—H6C | 0.9000 |
O6—H6A | 0.8200 | O16—C46 | 1.307 (5) |
Ni2—O7 | 2.030 (3) | C46—O17 | 1.219 (4) |
Ni2—O16 | 2.036 (3) | C46—C47 | 1.483 (6) |
Ni2—O10 | 2.056 (3) | C47—C48 | 1.553 (5) |
Ni2—N3 | 2.069 (3) | C47—H47 | 0.9800 |
Ni2—N4 | 2.074 (3) | C48—C49 | 1.497 (6) |
N3—C20 | 1.496 (5) | C48—H48A | 0.9700 |
N3—H3C | 0.9000 | C48—H48B | 0.9700 |
N3—H3D | 0.9000 | C49—C54 | 1.392 (5) |
O7—C19 | 1.263 (4) | C49—C50 | 1.414 (5) |
C19—O8 | 1.255 (5) | C50—C51 | 1.361 (6) |
C19—C20 | 1.518 (5) | C50—H50 | 0.9300 |
C20—C21 | 1.546 (5) | C51—C52 | 1.390 (5) |
C20—H20 | 0.9800 | C51—H51 | 0.9300 |
C21—C22 | 1.505 (5) | C52—O18 | 1.352 (5) |
C21—H21A | 0.9700 | C52—C53 | 1.381 (6) |
C21—H21B | 0.9700 | C53—C54 | 1.381 (6) |
C22—C23 | 1.374 (5) | C53—H53 | 0.9300 |
C22—C27 | 1.387 (6) | C54—H54 | 0.9300 |
C23—C24 | 1.398 (5) | O18—H18A | 0.8200 |
C23—H23 | 0.9300 | O3M—C3M | 1.382 (7) |
C24—C25 | 1.390 (6) | C1M—H1M1 | 0.9600 |
C24—H24 | 0.9300 | C1M—H1M2 | 0.9600 |
C25—O9 | 1.365 (5) | C1M—H1M3 | 0.9600 |
C25—C26 | 1.378 (6) | O2M—C2M | 1.526 (10) |
C26—C27 | 1.382 (6) | O4M—C4M | 1.423 (12) |
C26—H26 | 0.9300 | O5M—C5M | 1.306 (11) |
O1—Ni1—N1 | 82.06 (11) | C25—C26—H26 | 120.0 |
O1—Ni1—O4 | 91.83 (10) | C27—C26—H26 | 120.0 |
N1—Ni1—O4 | 171.72 (11) | C26—C27—C22 | 121.8 (4) |
O1—Ni1—N2 | 92.38 (11) | C26—C27—H27 | 119.1 |
N1—Ni1—N2 | 97.58 (14) | C22—C27—H27 | 119.1 |
O4—Ni1—N2 | 77.00 (12) | C25—O9—H9A | 109.5 |
O1—Ni1—O1M | 88.80 (9) | C29—N4—Ni2 | 106.4 (2) |
N1—Ni1—O1M | 103.90 (12) | C29—N4—H4A | 110.5 |
O4—Ni1—O1M | 81.44 (9) | Ni2—N4—H4A | 110.5 |
N2—Ni1—O1M | 158.43 (11) | C29—N4—H4B | 110.5 |
O1—Ni1—O10 | 167.32 (10) | Ni2—N4—H4B | 110.5 |
N1—Ni1—O10 | 95.69 (11) | H4A—N4—H4B | 108.6 |
O4—Ni1—O10 | 91.47 (10) | C28—O10—Ni2 | 115.7 (2) |
N2—Ni1—O10 | 100.29 (11) | C28—O10—Ni1 | 139.6 (2) |
O1M—Ni1—O10 | 79.59 (9) | Ni2—O10—Ni1 | 99.64 (10) |
C1M—O1M—Ni2 | 119.9 (2) | O11—C28—O10 | 125.3 (3) |
C1M—O1M—Ni1 | 117.8 (2) | O11—C28—C29 | 119.3 (3) |
Ni2—O1M—Ni1 | 99.59 (10) | O10—C28—C29 | 115.3 (3) |
C1M—O1M—Ni3 | 119.8 (2) | N4—C29—C28 | 110.2 (3) |
Ni2—O1M—Ni3 | 97.17 (10) | N4—C29—C30 | 113.5 (3) |
Ni1—O1M—Ni3 | 98.01 (10) | C28—C29—C30 | 114.0 (3) |
C2—N1—Ni1 | 111.6 (2) | N4—C29—H29 | 106.2 |
C2—N1—H1A | 109.3 | C28—C29—H29 | 106.2 |
Ni1—N1—H1A | 109.3 | C30—C29—H29 | 106.2 |
C2—N1—H1B | 109.3 | C31—C30—C29 | 115.5 (3) |
Ni1—N1—H1B | 109.3 | C31—C30—H30A | 108.4 |
H1A—N1—H1B | 108.0 | C29—C30—H30A | 108.4 |
C1—O1—Ni1 | 114.0 (2) | C31—C30—H30B | 108.4 |
O2—C1—O1 | 122.4 (4) | C29—C30—H30B | 108.4 |
O2—C1—C2 | 117.0 (4) | H30A—C30—H30B | 107.5 |
O1—C1—C2 | 120.6 (3) | C32—C31—C36 | 116.2 (4) |
N1—C2—C1 | 110.1 (3) | C32—C31—C30 | 120.0 (4) |
N1—C2—C3 | 112.8 (3) | C36—C31—C30 | 123.8 (4) |
C1—C2—C3 | 110.8 (3) | C33—C32—C31 | 121.7 (4) |
N1—C2—H2 | 107.6 | C33—C32—H32 | 119.2 |
C1—C2—H2 | 107.6 | C31—C32—H32 | 119.2 |
C3—C2—H2 | 107.6 | C34—C33—C32 | 121.0 (4) |
C4—C3—C2 | 116.2 (3) | C34—C33—H33 | 119.5 |
C4—C3—H3A | 108.2 | C32—C33—H33 | 119.5 |
C2—C3—H3A | 108.2 | C33—C34—O12 | 124.4 (4) |
C4—C3—H3B | 108.2 | C33—C34—C35 | 119.1 (5) |
C2—C3—H3B | 108.2 | O12—C34—C35 | 116.4 (4) |
H3A—C3—H3B | 107.4 | C36—C35—C34 | 119.8 (4) |
C9—C4—C5 | 116.6 (4) | C36—C35—H35 | 120.1 |
C9—C4—C3 | 121.6 (4) | C34—C35—H35 | 120.1 |
C5—C4—C3 | 121.7 (4) | C35—C36—C31 | 121.9 (4) |
C6—C5—C4 | 123.3 (4) | C35—C36—H36 | 119.1 |
C6—C5—H5 | 118.4 | C31—C36—H36 | 119.1 |
C4—C5—H5 | 118.4 | C34—O12—H12 | 109.5 |
C5—C6—C7 | 119.6 (4) | O16—Ni3—O13 | 94.09 (10) |
C5—C6—H6 | 120.2 | O16—Ni3—N5 | 175.41 (12) |
C7—C6—H6 | 120.2 | O13—Ni3—N5 | 81.74 (11) |
O3—C7—C8 | 118.1 (4) | O16—Ni3—O4 | 91.53 (10) |
O3—C7—C6 | 123.8 (4) | O13—Ni3—O4 | 168.31 (11) |
C8—C7—C6 | 118.1 (4) | N5—Ni3—O4 | 92.24 (11) |
C7—C8—C9 | 120.1 (4) | O16—Ni3—N6 | 79.74 (12) |
C7—C8—H8 | 119.9 | O13—Ni3—N6 | 94.34 (12) |
C9—C8—H8 | 119.9 | N5—Ni3—N6 | 102.40 (12) |
C4—C9—C8 | 122.2 (4) | O4—Ni3—N6 | 96.75 (11) |
C4—C9—H9 | 118.9 | O16—Ni3—O1M | 80.37 (9) |
C8—C9—H9 | 118.9 | O13—Ni3—O1M | 90.18 (11) |
C7—O3—H3 | 109.5 | N5—Ni3—O1M | 97.66 (10) |
C11—N2—Ni1 | 106.6 (2) | O4—Ni3—O1M | 80.65 (10) |
C11—N2—H2A | 110.4 | N6—Ni3—O1M | 159.86 (10) |
Ni1—N2—H2A | 110.4 | C38—N5—Ni3 | 112.1 (2) |
C11—N2—H2B | 110.4 | C38—N5—H5A | 109.2 |
Ni1—N2—H2B | 110.4 | Ni3—N5—H5A | 109.2 |
H2A—N2—H2B | 108.6 | C38—N5—H5B | 109.2 |
C10—O4—Ni1 | 113.5 (2) | Ni3—N5—H5B | 109.2 |
C10—O4—Ni3 | 130.1 (2) | H5A—N5—H5B | 107.9 |
Ni1—O4—Ni3 | 99.65 (10) | C37—O13—Ni3 | 114.5 (2) |
O5—C10—O4 | 124.9 (4) | O13—C37—O14 | 122.0 (3) |
O5—C10—C11 | 119.2 (3) | O13—C37—C38 | 120.7 (3) |
O4—C10—C11 | 115.8 (3) | O14—C37—C38 | 117.3 (3) |
N2—C11—C12 | 112.5 (3) | N5—C38—C39 | 112.5 (3) |
N2—C11—C10 | 109.0 (3) | N5—C38—C37 | 110.4 (3) |
C12—C11—C10 | 114.6 (3) | C39—C38—C37 | 114.1 (4) |
N2—C11—H11 | 106.7 | N5—C38—H38 | 106.4 |
C12—C11—H11 | 106.7 | C39—C38—H38 | 106.4 |
C10—C11—H11 | 106.7 | C37—C38—H38 | 106.4 |
C13—C12—C11 | 114.2 (3) | C40—C39—C38 | 113.7 (4) |
C13—C12—H12A | 108.7 | C40—C39—H39A | 108.8 |
C11—C12—H12A | 108.7 | C38—C39—H39A | 108.8 |
C13—C12—H12B | 108.7 | C40—C39—H39B | 108.8 |
C11—C12—H12B | 108.7 | C38—C39—H39B | 108.8 |
H12A—C12—H12B | 107.6 | H39A—C39—H39B | 107.7 |
C18—C13—C14 | 116.2 (4) | C41—C40—C45 | 115.2 (5) |
C18—C13—C12 | 120.5 (4) | C41—C40—C39 | 122.0 (4) |
C14—C13—C12 | 123.3 (4) | C45—C40—C39 | 122.8 (4) |
C13—C14—C15 | 123.6 (4) | C42—C41—C40 | 123.1 (5) |
C13—C14—H14 | 118.2 | C42—C41—H41 | 118.5 |
C15—C14—H14 | 118.2 | C40—C41—H41 | 118.5 |
C14—C15—C16 | 118.2 (4) | C41—C42—C43 | 120.6 (5) |
C14—C15—H15 | 120.9 | C41—C42—H42 | 119.7 |
C16—C15—H15 | 120.9 | C43—C42—H42 | 119.7 |
O6—C16—C17 | 123.5 (4) | O15—C43—C42 | 123.4 (4) |
O6—C16—C15 | 117.0 (4) | O15—C43—C44 | 116.7 (4) |
C17—C16—C15 | 119.4 (4) | C42—C43—C44 | 119.9 (4) |
C16—C17—C18 | 120.2 (4) | C43—C44—C45 | 119.1 (4) |
C16—C17—H17 | 119.9 | C43—C44—H44 | 120.5 |
C18—C17—H17 | 119.9 | C45—C44—H44 | 120.5 |
C13—C18—C17 | 122.2 (4) | C44—C45—C40 | 122.1 (4) |
C13—C18—H18 | 118.9 | C44—C45—H45 | 118.9 |
C17—C18—H18 | 118.9 | C40—C45—H45 | 118.9 |
C16—O6—H6A | 109.5 | C43—O15—H15A | 109.5 |
O7—Ni2—O16 | 170.42 (10) | C47—N6—Ni3 | 110.1 (2) |
O7—Ni2—O10 | 94.22 (10) | C47—N6—H6B | 109.6 |
O16—Ni2—O10 | 92.13 (11) | Ni3—N6—H6B | 109.6 |
O7—Ni2—O1M | 93.04 (10) | C47—N6—H6C | 109.6 |
O16—Ni2—O1M | 80.85 (9) | Ni3—N6—H6C | 109.6 |
O10—Ni2—O1M | 81.11 (9) | H6B—N6—H6C | 108.2 |
O7—Ni2—N3 | 82.47 (11) | C46—O16—Ni3 | 118.9 (2) |
O16—Ni2—N3 | 90.61 (12) | C46—O16—Ni2 | 139.0 (2) |
O10—Ni2—N3 | 174.38 (12) | Ni3—O16—Ni2 | 101.34 (11) |
O1M—Ni2—N3 | 94.50 (11) | O17—C46—O16 | 122.8 (4) |
O7—Ni2—N4 | 93.59 (11) | O17—C46—C47 | 120.9 (4) |
O16—Ni2—N4 | 94.65 (11) | O16—C46—C47 | 116.3 (3) |
O10—Ni2—N4 | 79.10 (10) | C46—C47—N6 | 111.6 (3) |
O1M—Ni2—N4 | 159.52 (10) | C46—C47—C48 | 108.9 (3) |
N3—Ni2—N4 | 105.56 (11) | N6—C47—C48 | 110.6 (3) |
C20—N3—Ni2 | 110.8 (2) | C46—C47—H47 | 108.6 |
C20—N3—H3C | 109.5 | N6—C47—H47 | 108.6 |
Ni2—N3—H3C | 109.5 | C48—C47—H47 | 108.6 |
C20—N3—H3D | 109.5 | C49—C48—C47 | 114.6 (3) |
Ni2—N3—H3D | 109.5 | C49—C48—H48A | 108.6 |
H3C—N3—H3D | 108.1 | C47—C48—H48A | 108.6 |
C19—O7—Ni2 | 115.0 (3) | C49—C48—H48B | 108.6 |
O8—C19—O7 | 121.6 (4) | C47—C48—H48B | 108.6 |
O8—C19—C20 | 118.1 (3) | H48A—C48—H48B | 107.6 |
O7—C19—C20 | 120.3 (4) | C54—C49—C50 | 116.2 (4) |
N3—C20—C19 | 110.3 (3) | C54—C49—C48 | 122.4 (4) |
N3—C20—C21 | 111.5 (3) | C50—C49—C48 | 121.5 (4) |
C19—C20—C21 | 111.0 (3) | C51—C50—C49 | 121.6 (4) |
N3—C20—H20 | 108.0 | C51—C50—H50 | 119.2 |
C19—C20—H20 | 108.0 | C49—C50—H50 | 119.2 |
C21—C20—H20 | 108.0 | C50—C51—C52 | 121.5 (4) |
C22—C21—C20 | 113.8 (3) | C50—C51—H51 | 119.3 |
C22—C21—H21A | 108.8 | C52—C51—H51 | 119.3 |
C20—C21—H21A | 108.8 | O18—C52—C53 | 117.4 (4) |
C22—C21—H21B | 108.8 | O18—C52—C51 | 124.8 (4) |
C20—C21—H21B | 108.8 | C53—C52—C51 | 117.8 (4) |
H21A—C21—H21B | 107.7 | C54—C53—C52 | 121.1 (4) |
C23—C22—C27 | 117.2 (3) | C54—C53—H53 | 119.5 |
C23—C22—C21 | 121.2 (4) | C52—C53—H53 | 119.5 |
C27—C22—C21 | 121.4 (3) | C53—C54—C49 | 121.8 (4) |
C22—C23—C24 | 122.6 (4) | C53—C54—H54 | 119.1 |
C22—C23—H23 | 118.7 | C49—C54—H54 | 119.1 |
C24—C23—H23 | 118.7 | C52—O18—H18A | 109.5 |
C25—C24—C23 | 118.5 (4) | O1M—C1M—H1M1 | 109.5 |
C25—C24—H24 | 120.7 | O1M—C1M—H1M2 | 109.5 |
C23—C24—H24 | 120.7 | H1M1—C1M—H1M2 | 109.5 |
O9—C25—C26 | 119.0 (4) | O1M—C1M—H1M3 | 109.5 |
O9—C25—C24 | 121.2 (3) | H1M1—C1M—H1M3 | 109.5 |
C26—C25—C24 | 119.8 (4) | H1M2—C1M—H1M3 | 109.5 |
C25—C26—C27 | 120.0 (4) |
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O15i | 0.90 | 2.26 | 3.082 (4) | 153 |
N1—H1B···O18i | 0.90 | 2.20 | 3.042 (4) | 157 |
O3—H3···O3M | 0.82 | 1.79 | 2.601 (5) | 170 |
O6—H6A···O14ii | 0.82 | 1.88 | 2.685 (4) | 166 |
N3—H3C···O13 | 0.90 | 2.36 | 3.174 (4) | 150 |
O9—H9A···O2iii | 0.82 | 1.78 | 2.597 (4) | 173 |
N4—H4B···O17 | 0.90 | 2.29 | 3.050 (5) | 142 |
O12—H12···O2Miii | 0.82 | 1.90 | 2.669 (7) | 155 |
N5—H5A···O1 | 0.90 | 2.46 | 3.251 (4) | 146 |
N5—H5A···O9iv | 0.90 | 2.54 | 3.216 (4) | 133 |
O15—H15A···O8v | 0.82 | 2.02 | 2.815 (4) | 164 |
O15—H15A···O7v | 0.82 | 2.47 | 2.983 (4) | 122 |
O18—H18A···O11v | 0.82 | 1.84 | 2.638 (4) | 163 |
C1M—H1M1···O1 | 0.96 | 2.52 | 3.042 (4) | 114 |
C30—H30A···O11 | 0.97 | 2.55 | 2.893 (5) | 101 |
C38—H38···O9iv | 0.98 | 2.38 | 3.178 (5) | 138 |
C54—H54···O5 | 0.93 | 2.42 | 3.338 (5) | 167 |
Symmetry codes: (i) x, y, z+1; (ii) −x+1, y−1/2, −z+1; (iii) x−1, y, z; (iv) x+1, y, z; (v) x, y, z−1. |
Experimental details
Crystal data | |
Chemical formula | [Ni3(C9H10NO3)6(CH3O)]·4CH4O |
Mr | 1400.28 |
Crystal system, space group | Monoclinic, P21 |
Temperature (K) | 150 |
a, b, c (Å) | 12.5688 (6), 25.3381 (9), 13.1058 (7) |
β (°) | 96.740 (4) |
V (Å3) | 4145.0 (3) |
Z | 2 |
Radiation type | Mo Kα |
µ (mm−1) | 0.74 |
Crystal size (mm) | 0.36 × 0.35 × 0.34 |
Data collection | |
Diffractometer | Stoe IPDS2 |
Absorption correction | Analytical (a face-indexed absorption correction was applied using the Tompa method; Meulenaer de & Tompa, 1965) |
Tmin, Tmax | 0.716, 0.780 |
No. of measured, independent and observed [I > 2σ(I)] reflections | 41350, 16565, 11845 |
Rint | 0.074 |
(sin θ/λ)max (Å−1) | 0.620 |
Refinement | |
R[F2 > 2σ(F2)], wR(F2), S | 0.040, 0.097, 0.88 |
No. of reflections | 16565 |
No. of parameters | 780 |
No. of restraints | 1 |
H-atom treatment | H-atom parameters constrained |
Δρmax, Δρmin (e Å−3) | 0.83, −0.38 |
Absolute structure | Flack (1983), 8080 Friedel pairs |
Absolute structure parameter | 0.023 (9) |
Computer programs: X-AREA (Stoe & Cie, 2002), SHELXS97 (Sheldrick, 2008), SHELXL97 (Sheldrick, 2008), DIAMOND (Brandenburg, 2006), publCIF (Westrip, 2010).
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1A···O15i | 0.90 | 2.26 | 3.082 (4) | 153 |
N1—H1B···O18i | 0.90 | 2.20 | 3.042 (4) | 157 |
O3—H3···O3M | 0.82 | 1.79 | 2.601 (5) | 170 |
O6—H6A···O14ii | 0.82 | 1.88 | 2.685 (4) | 166 |
N3—H3C···O13 | 0.90 | 2.36 | 3.174 (4) | 150 |
O9—H9A···O2iii | 0.82 | 1.78 | 2.597 (4) | 173 |
N4—H4B···O17 | 0.90 | 2.29 | 3.050 (5) | 142 |
O12—H12···O2Miii | 0.82 | 1.90 | 2.669 (7) | 155 |
N5—H5A···O1 | 0.90 | 2.46 | 3.251 (4) | 146 |
N5—H5A···O9iv | 0.90 | 2.54 | 3.216 (4) | 133 |
O15—H15A···O8v | 0.82 | 2.02 | 2.815 (4) | 164 |
O15—H15A···O7v | 0.82 | 2.47 | 2.983 (4) | 122 |
O18—H18A···O11v | 0.82 | 1.84 | 2.638 (4) | 163 |
C1M—H1M1···O1 | 0.96 | 2.52 | 3.042 (4) | 114 |
C30—H30A···O11 | 0.97 | 2.55 | 2.893 (5) | 101 |
C38—H38···O9iv | 0.98 | 2.38 | 3.178 (5) | 138 |
C54—H54···O5 | 0.93 | 2.42 | 3.338 (5) | 167 |
Symmetry codes: (i) x, y, z+1; (ii) −x+1, y−1/2, −z+1; (iii) x−1, y, z; (iv) x+1, y, z; (v) x, y, z−1. |
In the investigation of anti-bacterial and anti-fungal activities of the divalent metal complexes using (S)-2-amino-2-methyl-3-(4'-hydroxyphenyl)propanoic acid (L-tyrosine) under basic conditions, single crystals of [Ni3(C9H11NO3)6(OCH3)].4CH3OH (1) were prepared and isolated.
The asymmetric unit of 1 contains a neutral cluster of ninety-one non-hydrogen atoms comprising three Ni ions, six tyrosinate ligands, a methoxide ion and four methanol molecules (Fig. 1). The three Ni ions adopt similar octahedral coordination geometries, completed by two monodentate amino N atoms, one monodentate carboxylate O atom, two carboxylate bridging µ2-O atoms, and one bridging µ3-O atom of the methoxide ion: {Ni(µ1-O)(µ2-O)2(µ3-O)((µ1-N)2}. The six tyrosinate ligands exhibit the common chelating mode of coordination, using the amino N atoms and either the carboxylate µ2-η2:η0 O atoms (O4, O10, O16) or the carboxylate µ1-η1:η0 O atoms (O1, O7, O13). These generate two five-membered chelate rings about each Ni center. These coordination modes are commonly found in the tyrosinate ligands (Pei & Wang, 2006; Wojciechowska et al., 2011, 2012). Curiously, none of the phenolic groups of the tyrosine ligands within 1 are coordinated to the metal, despite conditions sufficiently basic to produce methoxide. The presence of the coordinated methoxide should invalidate any assumption on the presence of any extra-framework species with positive charges. The positive charge of Ni ions is therefore balanced by six tyrosinate ligands and one methoxide ion, resulting in the mean oxidation state of each nickel to be +2.33 (possibly a combination of two NiII and one NiIII). The solid conclusion may be derived by a magnetic study of 1.
The three {Ni(µ1-O)(µ2-O)2(µ3-O)((µ1-N)2} octahedra are condensed by edge-sharing and the addition of a µ3-OCH3 group (O1M) results in a trinuclear cluster with the {Ni3(µ1-O)(µ2-O)2(µ3-O)} incomplete cubane core (Fig. 2) (Ama et al., 2000; Lalia-Kantouri et al., 2010). Notably, the nickel ions present within the cluster must display a total positive charge of +7 to balanced the six tyrosinate ions and one methoxide ion. This corresponds to a mean oxidation state for the nickel of +2.33. The complete cubane core [Ni4O4] is rather well illustrated within the CSD (Allen, 2002) with over 100 examples. There are only 10 examples of the incomplete cubane core [Ni3O4]; the core within 1 is rather more symmetric than many of these examples. If the Ni atoms are taken as nodes, the{Ni3(µ1-O)(µ2-O)2(µ3-O)} core can be characterized as the 2-connected uninodal net of 2M3–1 topology with the vertex symbol [3] (Blatov, 2012).
The summation of the inner angles for each quadrilateral face of the {Ni3(µ1-O)(µ2-O)2(µ3-O)} core, i.e. {Ni1—O10—Ni2—O1M}, {Ni1—O4—Ni3—O1M} and {Ni2—O16—Ni3—O1M}, of ca. 360° suggest the planarity of these faces. Distributions of the Ni—µ3-O1M distances and the Ni—µ3-O1M—Ni angles in the ranges 2.067 (2) - 2.109 (2) Å and 97.17 (10) - 99.59 (10)°, respectively, imply an asymmetrical arrangement of the three Ni atoms about the apical µ3-O1M atom. This is also evident from the distances between any two Ni ions which vary within the range 3.132 (1) - 3.174 (1) Å. These relatively short distances between pairs of Ni cations may signal the presence of weak metallic bonds within 1. In nickel metal the Ni—Ni distance is 2.49 Å, while in the CSD Ni to Ni distances lie in the range 2.194 - 3.441 Å (Allen, 2002). The triangular arrangement of Ni ions within the cluster may also induce spin disorder and be associated with magnetic frustration. (Hendrickson et al., 2005; Lalia-Kantouri et al., 2010; Nakatsuji et al., 2005).
According to previous literature, three inter-ligand (intra-cluster) hydrogen bonding interactions of N—H···O type were reported to be important in stabilizing the incomplete cubane structure (Ama et al., 2000). This seems to be partially true for the {Ni3(µ1-O)(µ2-O)2(µ3-O)} core in 1, in which three N—H···O hydrogen bonding interactions, i.e. N3—H3C···O13, N4—H4B···O17 and N5—H5A···O1 [N···O 3.050 (5) - 3.251 (4) Å, N—H···O 142° - 150°], are present (Fig. 3). Atoms N1 and N5, in addition, reinforce the stability of the {Ni3(µ1-O)(µ2-O)2(µ3-O)} core via the inter-cluster interactions, i.e. N1—H1A···O15, N1—H1B···O18 and N5—H5A···O9 [N···O 3.042 (4) - 3.216 (4) Å, N—H···O 132.69° - 156.47°] (Fig. 4). The presence of the —CH2— group in the structure of the tyrosinate provides flexibility in spatial arrangement of the —(C6H4)OH part, depending on the surrounding environment. In the crystal structure of 1, the arrangement of these motifs is regulated by the strong O—H···O hydrogen bonding interactions (Fig. 4). The OH groups of all tyrosinate anions are associated in the O—H···O interactions with the neighboring clusters and methanol molecules [O—H···O 2.597 (4) - 2.983 (4) Å, O—H···O 122 - 173°], and these generate the supramolecular assembly in 1. The arrangement of these clusters occurs in such a way to maximize the hydrogen bonding interactions of which the weak hydrogen bonding of C—H···O type are also present, i.e. the intra-cluster C30—H30A···O11 and C54—H54···O5, and the inter-cluster C1M—H1M1···O1 and C38—H38···O9.
The clusters are arranged by the 21 screw axis into layers in the xz plane. These layers are stacked in an ABAB arrangement parallel to b. There exist hydrogen bonds between the clusters, both within the layers and between them. This packing arrangement of clusters is rather inefficient and the structure contains large voids centred on the origin such that approximately 39% of the structure is solvent accessible volume. Methanol molecules within these regions were poorly located and the reflection data were treated with the SQUEEZE algorithm (Spek, 2009) to model electron density within these regions. These calculations reveal that each void contains around 279 electrons consistent with around 17 molecules of methanol, giving an overall composition for 1 of [Ni3(C9H11NO3)6(OCH3)].21CH3OH. The methanol is lost very quickly when crystals are removed from solvent and this has prevented extensive analysis of the properties of 1.
The presence of methoxide suggests that it should be possible to obtain similar structures with other weakly coordinating anions. Similarly, replacement of method by other, bulkier and less volatile solvents, may enable further studies on similar compounds, in particular magnetic measurements. Clusters of this type therefore may be suitable for fundamental magnetic studies by variation of ligand bulk, or may prove suitable nodes in the construction of framework solids by appropriate ligand choice.