Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S1600536814010228/tk5312sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S1600536814010228/tk5312Isup2.hkl | |
Chemdraw file https://doi.org/10.1107/S1600536814010228/tk5312Isup3.cdx |
CCDC reference: 1001220
Key indicators
- Single-crystal X-ray study
- T = 173 K
- Mean (C-C) = 0.007 Å
- R factor = 0.028
- wR factor = 0.070
- Data-to-parameter ratio = 13.9
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT125_ALERT_4_C No '_symmetry_space_group_name_Hall' Given ..... Please Do ! PLAT911_ALERT_3_C Missing # FCF Refl Between THmin & STh/L= 0.595 8 Why ? PLAT971_ALERT_2_C Check Calcd Residual Density 0.98A From Hg1 2.24 eA-3 PLAT971_ALERT_2_C Check Calcd Residual Density 0.84A From Hg1 2.09 eA-3 PLAT971_ALERT_2_C Check Calcd Residual Density 1.06A From Hg1 1.61 eA-3 PLAT972_ALERT_2_C Check Calcd Residual Density 1.10A From Hg1 -1.76 eA-3 PLAT972_ALERT_2_C Check Calcd Residual Density 0.86A From Hg1 -1.72 eA-3
Alert level G PLAT004_ALERT_5_G Polymeric Structure Found with Dimension ....... 1 Info PLAT005_ALERT_5_G No _iucr_refine_instructions_details in the CIF Please Do ! PLAT066_ALERT_1_G Predicted and Reported Tmin&Tmax Range Identical ? Check PLAT371_ALERT_2_G Long C(sp2)-C(sp1) Bond C3 - C6 ... 1.42 Ang. PLAT371_ALERT_2_G Long C(sp2)-C(sp1) Bond C7 - C8 ... 1.43 Ang. PLAT804_ALERT_5_G Number of ARU-Code Packing Problem(s) in PLATON 8 Info PLAT909_ALERT_3_G Percentage of Observed Data at Theta(Max) still 92 % PLAT910_ALERT_3_G Missing # of FCF Reflections Below Th(Min) ..... 1 Why ? PLAT961_ALERT_5_G Dataset Contains no Negative Intensities ....... Please Check
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 7 ALERT level C = Check. Ensure it is not caused by an omission or oversight 9 ALERT level G = General information/check it is not something unexpected 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 3 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 4 ALERT type 5 Informative message, check
Recently, a large number of coordination polymers assembled from pyridyl-based ligands have been extensively investigated. Most of these coordination polymers are constructed from 4,4'-bipyridyl but other examples of bridging ligands are known, such as with 1,4-bis(pyridin-4-ylethynyl)benzene (Yamada et al., 2011). Mercury coordination polymers are known (Xie et al., 2007)
In this work, an linear pyridyl-based ligand, 1,4-bis(pyridin-4-ylethynyl)benzene, was employed to react with HgCl2 to afford the title complex, [Hg(C20H12N2)Cl2]]n (I). In I, the Hg(II) center is coordinated by two N atoms of two different 1,4-bis(pyridin-4-ylethynyl)benzene ligands and two chloride ions in a distorted tetrahedral geometry (Fig. 1). The Hg(II) centers are linked by 1,4-bis(pyridin-4-ylethynyl)benzene ligands to form a one-dimensional zigzag chain and the chain is parallel to [102] (Fig. 2). The dihedral angles between coordinated pyridine rings and benzene ring are ca. 12.8 (2)°.
The ligand 1,4-bis(pyridin-4-ylethynyl)benzene (bpyb) was synthesized from the reaction between 4-(prop-1-yn-1-yl)pyridine and 1,4-diiodobenzene following the reported procedure (Fasina et al., 2004). A methanol (3 ml) solution of HgCl2 (0.1 mmol, 27 mg) was layered upon a chloroform solution (3 ml) of bpyp (0.2 mmol, 56 mg). After three days, colourless crystals of the title complex suitable for X-ray analysis were obtained.
Data collection: SMART (Bruker, 1998); cell refinement: SAINT (Bruker, 1998); data reduction: SAINT (Bruker, 1998); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: SHELXTL (Sheldrick, 2008); software used to prepare material for publication: SHELXTL (Sheldrick, 2008).
[HgCl2(C20H12N2)] | Z = 2 |
Mr = 551.81 | F(000) = 520 |
Monoclinic, P2/c | Dx = 2.035 Mg m−3 |
a = 12.285 (3) Å | Mo Kα radiation, λ = 0.71073 Å |
b = 4.8482 (10) Å | µ = 8.85 mm−1 |
c = 15.271 (3) Å | T = 173 K |
β = 98.00 (3)° | Block, colourless |
V = 900.7 (3) Å3 | 0.18 × 0.16 × 0.16 mm |
Bruker SMART 1000 CCD area-detector diffractometer | 1585 independent reflections |
Radiation source: fine-focus sealed tube | 1512 reflections with I > 2σ(I) |
Graphite monochromator | Rint = 0.033 |
ω and phi scan | θmax = 25.0°, θmin = 2.7° |
Absorption correction: multi-scan (SADABS; Sheldrick, 1995) | h = −11→14 |
Tmin = 0.222, Tmax = 0.243 | k = −5→5 |
4238 measured reflections | l = −18→17 |
Refinement on F2 | Primary atom site location: structure-invariant direct methods |
Least-squares matrix: full | Secondary atom site location: difference Fourier map |
R[F2 > 2σ(F2)] = 0.028 | Hydrogen site location: inferred from neighbouring sites |
wR(F2) = 0.070 | H-atom parameters constrained |
S = 0.92 | w = 1/[σ2(Fo2) + (0.0394P)2 + 2.093P] where P = (Fo2 + 2Fc2)/3 |
1585 reflections | (Δ/σ)max < 0.001 |
114 parameters | Δρmax = 2.15 e Å−3 |
0 restraints | Δρmin = −1.73 e Å−3 |
[HgCl2(C20H12N2)] | V = 900.7 (3) Å3 |
Mr = 551.81 | Z = 2 |
Monoclinic, P2/c | Mo Kα radiation |
a = 12.285 (3) Å | µ = 8.85 mm−1 |
b = 4.8482 (10) Å | T = 173 K |
c = 15.271 (3) Å | 0.18 × 0.16 × 0.16 mm |
β = 98.00 (3)° |
Bruker SMART 1000 CCD area-detector diffractometer | 1585 independent reflections |
Absorption correction: multi-scan (SADABS; Sheldrick, 1995) | 1512 reflections with I > 2σ(I) |
Tmin = 0.222, Tmax = 0.243 | Rint = 0.033 |
4238 measured reflections |
R[F2 > 2σ(F2)] = 0.028 | 0 restraints |
wR(F2) = 0.070 | H-atom parameters constrained |
S = 0.92 | Δρmax = 2.15 e Å−3 |
1585 reflections | Δρmin = −1.73 e Å−3 |
114 parameters |
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
x | y | z | Uiso*/Ueq | ||
Hg1 | 0.5000 | −0.01536 (4) | 0.2500 | 0.01426 (13) | |
Cl1 | 0.61049 (9) | −0.1178 (2) | 0.38614 (6) | 0.0215 (3) | |
C6 | 0.1775 (4) | 0.9118 (11) | 0.3998 (3) | 0.0188 (9) | |
C5 | 0.3948 (4) | 0.3872 (9) | 0.3923 (3) | 0.0178 (9) | |
H5 | 0.4536 | 0.3071 | 0.4310 | 0.021* | |
C3 | 0.2446 (3) | 0.7051 (9) | 0.3688 (3) | 0.0161 (9) | |
C2 | 0.2249 (4) | 0.6136 (9) | 0.2821 (3) | 0.0193 (9) | |
H2 | 0.1656 | 0.6871 | 0.2425 | 0.023* | |
C7 | 0.1230 (4) | 1.0887 (10) | 0.4276 (3) | 0.0179 (9) | |
C8 | 0.0599 (3) | 1.2960 (8) | 0.4641 (3) | 0.0156 (8) | |
C4 | 0.3310 (4) | 0.5860 (11) | 0.4251 (3) | 0.0196 (9) | |
H4 | 0.3457 | 0.6411 | 0.4853 | 0.024* | |
C1 | 0.2929 (4) | 0.4134 (11) | 0.2537 (3) | 0.0197 (9) | |
H1 | 0.2795 | 0.3527 | 0.1940 | 0.024* | |
C10 | 0.1000 (4) | 1.4112 (11) | 0.5461 (3) | 0.0205 (9) | |
H10 | 0.1682 | 1.3511 | 0.5772 | 0.025* | |
C9 | −0.0398 (4) | 1.3864 (10) | 0.4180 (3) | 0.0197 (9) | |
H9 | −0.0665 | 1.3092 | 0.3619 | 0.024* | |
N1 | 0.3772 (3) | 0.3030 (7) | 0.3080 (2) | 0.0141 (7) |
U11 | U22 | U33 | U12 | U13 | U23 | |
Hg1 | 0.01265 (19) | 0.01679 (18) | 0.01374 (17) | 0.000 | 0.00326 (11) | 0.000 |
Cl1 | 0.0189 (6) | 0.0284 (7) | 0.0167 (5) | 0.0057 (4) | 0.0013 (4) | 0.0040 (4) |
C6 | 0.018 (3) | 0.019 (2) | 0.020 (2) | −0.001 (2) | 0.0039 (19) | 0.0006 (19) |
C5 | 0.014 (2) | 0.020 (2) | 0.018 (2) | 0.0032 (18) | 0.0009 (17) | −0.0011 (17) |
C3 | 0.016 (2) | 0.015 (2) | 0.018 (2) | −0.0011 (17) | 0.0063 (16) | −0.0011 (16) |
C2 | 0.018 (2) | 0.020 (3) | 0.019 (2) | 0.0059 (19) | 0.0012 (18) | 0.0001 (18) |
C7 | 0.018 (3) | 0.020 (2) | 0.016 (2) | −0.002 (2) | 0.0014 (18) | 0.0005 (19) |
C8 | 0.017 (2) | 0.015 (2) | 0.0162 (19) | −0.0015 (17) | 0.0068 (16) | 0.0019 (16) |
C4 | 0.018 (3) | 0.023 (2) | 0.018 (2) | 0.001 (2) | 0.0053 (18) | −0.005 (2) |
C1 | 0.020 (3) | 0.024 (2) | 0.017 (2) | 0.002 (2) | 0.0060 (19) | −0.0011 (19) |
C10 | 0.019 (3) | 0.022 (2) | 0.020 (2) | 0.004 (2) | 0.0039 (19) | 0.002 (2) |
C9 | 0.020 (2) | 0.021 (2) | 0.018 (2) | 0.0003 (19) | 0.0041 (18) | −0.0036 (18) |
N1 | 0.0115 (18) | 0.0172 (18) | 0.0145 (16) | −0.0012 (14) | 0.0053 (13) | −0.0004 (14) |
Hg1—Cl1i | 2.3719 (12) | C2—H2 | 0.9500 |
Hg1—Cl1 | 2.3719 (12) | C7—C8 | 1.428 (6) |
Hg1—N1i | 2.412 (3) | C8—C9 | 1.396 (6) |
Hg1—N1 | 2.412 (3) | C8—C10 | 1.397 (6) |
C6—C7 | 1.202 (8) | C4—H4 | 0.9500 |
C6—C3 | 1.420 (6) | C1—N1 | 1.344 (6) |
C5—N1 | 1.339 (5) | C1—H1 | 0.9500 |
C5—C4 | 1.380 (7) | C10—C9ii | 1.386 (7) |
C5—H5 | 0.9500 | C10—H10 | 0.9500 |
C3—C2 | 1.385 (6) | C9—C10ii | 1.386 (7) |
C3—C4 | 1.395 (6) | C9—H9 | 0.9500 |
C2—C1 | 1.389 (7) | ||
Cl1i—Hg1—Cl1 | 155.82 (6) | C9—C8—C7 | 120.7 (4) |
Cl1i—Hg1—N1i | 97.08 (8) | C10—C8—C7 | 119.2 (4) |
Cl1—Hg1—N1i | 98.33 (8) | C5—C4—C3 | 119.1 (4) |
Cl1i—Hg1—N1 | 98.33 (8) | C5—C4—H4 | 120.4 |
Cl1—Hg1—N1 | 97.08 (8) | C3—C4—H4 | 120.4 |
N1i—Hg1—N1 | 100.42 (16) | N1—C1—C2 | 122.1 (4) |
C7—C6—C3 | 178.3 (5) | N1—C1—H1 | 119.0 |
N1—C5—C4 | 122.5 (4) | C2—C1—H1 | 119.0 |
N1—C5—H5 | 118.7 | C9ii—C10—C8 | 119.8 (4) |
C4—C5—H5 | 118.7 | C9ii—C10—H10 | 120.1 |
C2—C3—C4 | 118.3 (4) | C8—C10—H10 | 120.1 |
C2—C3—C6 | 120.8 (4) | C10ii—C9—C8 | 120.1 (4) |
C4—C3—C6 | 120.9 (4) | C10ii—C9—H9 | 120.0 |
C3—C2—C1 | 119.3 (4) | C8—C9—H9 | 120.0 |
C3—C2—H2 | 120.3 | C5—N1—C1 | 118.6 (4) |
C1—C2—H2 | 120.3 | C5—N1—Hg1 | 121.5 (3) |
C6—C7—C8 | 177.8 (5) | C1—N1—Hg1 | 119.7 (3) |
C9—C8—C10 | 120.1 (4) | ||
C4—C3—C2—C1 | −1.6 (7) | C4—C5—N1—C1 | −1.0 (7) |
C6—C3—C2—C1 | 179.3 (5) | C4—C5—N1—Hg1 | 174.6 (4) |
N1—C5—C4—C3 | −0.1 (8) | C2—C1—N1—C5 | 0.8 (7) |
C2—C3—C4—C5 | 1.4 (7) | C2—C1—N1—Hg1 | −174.9 (4) |
C6—C3—C4—C5 | −179.5 (5) | Cl1i—Hg1—N1—C5 | 168.6 (3) |
C3—C2—C1—N1 | 0.6 (8) | Cl1—Hg1—N1—C5 | 7.3 (3) |
C9—C8—C10—C9ii | 0.7 (8) | N1i—Hg1—N1—C5 | −92.5 (3) |
C7—C8—C10—C9ii | 179.7 (5) | Cl1i—Hg1—N1—C1 | −15.8 (3) |
C10—C8—C9—C10ii | −0.7 (8) | Cl1—Hg1—N1—C1 | −177.1 (3) |
C7—C8—C9—C10ii | −179.7 (5) | N1i—Hg1—N1—C1 | 83.0 (3) |
Symmetry codes: (i) −x+1, y, −z+1/2; (ii) −x, −y+3, −z+1. |
Hg1—Cl1i | 2.3719 (12) | Hg1—N1i | 2.412 (3) |
Hg1—Cl1 | 2.3719 (12) | Hg1—N1 | 2.412 (3) |
Symmetry code: (i) −x+1, y, −z+1/2. |