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The crystal structure of the freebase of the monoalkyl tryptamine N-cyclo­hexyl­tryptamine is presented, along with those of its bromide and fumarate salts.

Supporting information

cif

Crystallographic Information File (CIF) https://doi.org/10.1107/S2056989023006217/tx2070sup1.cif
Contains datablocks I, II, III

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989023006217/tx2070Isup2.hkl
Contains datablock I

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989023006217/tx2070IIsup3.hkl
Contains datablock II

hkl

Structure factor file (CIF format) https://doi.org/10.1107/S2056989023006217/tx2070IIIsup4.hkl
Contains datablock III

CCDC references: 2281772; 2281771; 2281770

Key indicators

Structure: I
  • Single-crystal X-ray study
  • T = 297 K
  • Mean [sigma](C-C) = 0.005 Å
  • R factor = 0.048
  • wR factor = 0.124
  • Data-to-parameter ratio = 15.3
Structure: II
  • Single-crystal X-ray study
  • T = 297 K
  • Mean [sigma](C-C) = 0.007 Å
  • R factor = 0.045
  • wR factor = 0.109
  • Data-to-parameter ratio = 18.0
Structure: III
  • Single-crystal X-ray study
  • T = 297 K
  • Mean [sigma](C-C) = 0.002 Å
  • R factor = 0.043
  • wR factor = 0.121
  • Data-to-parameter ratio = 16.3

checkCIF/PLATON results

No syntax errors found



Datablock: umd2564i_a


Alert level C STRVA01_ALERT_4_C Flack test results are ambiguous. From the CIF: _refine_ls_abs_structure_Flack 0.500 From the CIF: _refine_ls_abs_structure_Flack_su 0.700 PLAT230_ALERT_2_C Hirshfeld Test Diff for C5 --C6 . 7.0 s.u. PLAT241_ALERT_2_C High 'MainMol' Ueq as Compared to Neighbors of C9 Check PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00506 Ang. PLAT420_ALERT_2_C D-H Bond Without Acceptor N2 --H2 . Please Check PLAT767_ALERT_4_C INS Embedded LIST 6 Instruction Should be LIST 4 Please Check PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 3 Report
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 4 Note PLAT032_ALERT_4_G Std. Uncertainty on Flack Parameter Value High . 0.700 Report PLAT172_ALERT_4_G The CIF-Embedded .res File Contains DFIX Records 2 Report PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 3 Note PLAT883_ALERT_1_G No Info/Value for _atom_sites_solution_primary . Please Do ! PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 3 Note PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 6 Note PLAT913_ALERT_3_G Missing # of Very Strong Reflections in FCF .... 2 Note PLAT916_ALERT_2_G Hooft y and Flack x Parameter Values Differ by . 0.20 Check PLAT933_ALERT_2_G Number of HKL-OMIT Records in Embedded .res File 5 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 2 Info
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 7 ALERT level C = Check. Ensure it is not caused by an omission or oversight 11 ALERT level G = General information/check it is not something unexpected 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 7 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 5 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Datablock: umd2557f_a

Alert level C PLAT341_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00656 Ang. PLAT767_ALERT_4_C INS Embedded LIST 6 Instruction Should be LIST 4 Please Check PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 4.903 Check PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 8 Report
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 5 Note PLAT172_ALERT_4_G The CIF-Embedded .res File Contains DFIX Records 2 Report PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 3 Note PLAT883_ALERT_1_G No Info/Value for _atom_sites_solution_primary . Please Do ! PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 4 Note PLAT933_ALERT_2_G Number of HKL-OMIT Records in Embedded .res File 7 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 0 Info
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 4 ALERT level C = Check. Ensure it is not caused by an omission or oversight 7 ALERT level G = General information/check it is not something unexpected 1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 5 ALERT type 3 Indicator that the structure quality may be low 2 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
Datablock: umd2591d_a

Alert level C PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ Please Check PLAT767_ALERT_4_C INS Embedded LIST 6 Instruction Should be LIST 4 Please Check PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 3 Report
Alert level G PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 5 Note PLAT172_ALERT_4_G The CIF-Embedded .res File Contains DFIX Records 2 Report PLAT802_ALERT_4_G CIF Input Record(s) with more than 80 Characters 1 Info PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 3 Note PLAT883_ALERT_1_G No Info/Value for _atom_sites_solution_primary . Please Do ! PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 2 Note PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 7 Note PLAT913_ALERT_3_G Missing # of Very Strong Reflections in FCF .... 1 Note PLAT933_ALERT_2_G Number of HKL-OMIT Records in Embedded .res File 2 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 3 Info PLAT992_ALERT_5_G Repd & Actual _reflns_number_gt Values Differ by 3 Check
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 3 ALERT level C = Check. Ensure it is not caused by an omission or oversight 11 ALERT level G = General information/check it is not something unexpected 2 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 3 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 4 ALERT type 4 Improvement, methodology, query or suggestion 1 ALERT type 5 Informative message, check

Computing details top

For all structures, data collection: APEX4 (Bruker, 2021); cell refinement: SAINT (Bruker, 2021); data reduction: SAINT (Bruker, 2021); program(s) used to solve structure: SHELXT2014 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2018 (Sheldrick, 2015b); molecular graphics: OLEX2 (Dolomanov et al., 2009); software used to prepare material for publication: publCIF (Westrip, 2010).

N-[2-(1H-Indol-3-yl)ethyl]cyclohexanamine (I) top
Crystal data top
C16H22N2F(000) = 264
Mr = 242.35Dx = 1.178 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
a = 8.5446 (6) ÅCell parameters from 8705 reflections
b = 10.3990 (7) Åθ = 2.7–25.8°
c = 8.6149 (6) ŵ = 0.07 mm1
β = 116.784 (2)°T = 297 K
V = 683.35 (8) Å3Block, colourless
Z = 20.35 × 0.24 × 0.2 mm
Data collection top
Bruker D8 Venture CMOS
diffractometer
2396 reflections with I > 2σ(I)
φ and ω scansRint = 0.034
Absorption correction: multi-scan
(SADABS; Krause et al., 2015)
θmax = 25.8°, θmin = 3.3°
Tmin = 0.645, Tmax = 0.745h = 1010
18695 measured reflectionsk = 1212
2621 independent reflectionsl = 1010
Refinement top
Refinement on F2Hydrogen site location: mixed
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.048 w = 1/[σ2(Fo2) + (0.0573P)2 + 0.1584P]
where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.124(Δ/σ)max < 0.001
S = 1.04Δρmax = 0.26 e Å3
2621 reflectionsΔρmin = 0.16 e Å3
171 parametersAbsolute structure: Flack x determined using 1039 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
3 restraintsAbsolute structure parameter: 0.5 (7)
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
N10.6840 (4)0.3201 (3)0.7683 (3)0.0574 (6)
N20.4242 (4)0.5812 (3)0.0943 (3)0.0632 (7)
C10.6257 (4)0.3382 (4)0.5918 (4)0.0653 (9)
H1A0.5708840.2753620.5077900.078*
C20.7549 (4)0.4345 (3)0.8487 (4)0.0512 (7)
C30.8321 (4)0.4672 (3)1.0235 (4)0.0608 (8)
H30.8401700.4077441.1074390.073*
C40.8964 (5)0.5900 (4)1.0695 (5)0.0692 (9)
H40.9503200.6126451.1865090.083*
C50.8830 (5)0.6805 (4)0.9467 (5)0.0709 (9)
H50.9260880.7631210.9818030.085*
C60.8069 (4)0.6495 (3)0.7743 (5)0.0660 (9)
H60.7979580.7109520.6922940.079*
C70.7419 (4)0.5244 (3)0.7208 (4)0.0539 (7)
C80.6589 (4)0.4598 (4)0.5573 (4)0.0619 (8)
C90.6235 (5)0.5204 (5)0.3860 (4)0.0855 (13)
H9A0.6420610.6123330.4037850.103*
H9B0.7095780.4880380.3513640.103*
C100.4504 (5)0.4997 (4)0.2431 (4)0.0721 (11)
H10A0.3619470.5195460.2808220.086*
H10B0.4375570.4100280.2084520.086*
C110.2920 (4)0.5382 (3)0.0766 (3)0.0492 (6)
H110.1776800.5406570.0758960.059*
C120.3181 (4)0.4030 (3)0.1291 (4)0.0596 (8)
H12A0.4317960.3974300.1281560.072*
H12B0.3158750.3415790.0453370.072*
C130.1762 (6)0.3695 (4)0.3085 (5)0.0757 (10)
H13A0.1967780.2836910.3394410.091*
H13B0.0632340.3696080.3072340.091*
C140.1723 (5)0.4639 (5)0.4431 (5)0.0786 (11)
H14A0.2810490.4580990.4525370.094*
H14B0.0767030.4424570.5554350.094*
C150.1490 (5)0.5982 (4)0.3946 (4)0.0705 (9)
H15A0.0334730.6064360.4001880.085*
H15B0.1559150.6577860.4779590.085*
C160.2870 (5)0.6337 (3)0.2129 (4)0.0657 (9)
H16A0.2620240.7188930.1838130.079*
H16B0.4011060.6363670.2114420.079*
H20.524 (3)0.594 (5)0.083 (5)0.091 (14)*
H10.672 (5)0.249 (2)0.813 (4)0.067 (11)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
N10.0606 (15)0.0598 (16)0.0454 (13)0.0075 (12)0.0183 (11)0.0039 (11)
N20.0709 (17)0.0612 (17)0.0445 (14)0.0103 (14)0.0146 (12)0.0061 (12)
C10.0541 (17)0.092 (3)0.0430 (16)0.0035 (17)0.0155 (13)0.0069 (17)
C20.0454 (14)0.0590 (19)0.0470 (15)0.0150 (12)0.0188 (12)0.0066 (12)
C30.0663 (19)0.064 (2)0.0512 (16)0.0055 (16)0.0256 (15)0.0008 (15)
C40.070 (2)0.074 (2)0.066 (2)0.0022 (18)0.0326 (17)0.0135 (19)
C50.069 (2)0.066 (2)0.085 (3)0.0005 (17)0.041 (2)0.0092 (19)
C60.0566 (17)0.061 (2)0.092 (3)0.0139 (15)0.0436 (18)0.0245 (18)
C70.0422 (14)0.0677 (19)0.0545 (16)0.0148 (14)0.0243 (13)0.0098 (15)
C80.0475 (16)0.087 (2)0.0490 (17)0.0113 (16)0.0200 (14)0.0142 (16)
C90.062 (2)0.136 (4)0.0550 (19)0.008 (2)0.0229 (16)0.027 (2)
C100.079 (2)0.073 (2)0.0464 (17)0.0146 (17)0.0123 (16)0.0137 (15)
C110.0474 (14)0.0523 (16)0.0432 (14)0.0020 (12)0.0162 (11)0.0029 (12)
C120.0606 (17)0.0540 (18)0.0619 (18)0.0051 (15)0.0255 (15)0.0053 (15)
C130.088 (3)0.064 (2)0.068 (2)0.0063 (18)0.0290 (19)0.0126 (17)
C140.085 (3)0.097 (3)0.0528 (19)0.001 (2)0.0302 (18)0.0077 (19)
C150.071 (2)0.088 (3)0.0477 (17)0.0130 (19)0.0224 (15)0.0168 (17)
C160.084 (2)0.0551 (19)0.0510 (18)0.0032 (16)0.0247 (17)0.0092 (14)
Geometric parameters (Å, º) top
N1—C11.383 (4)C9—H9B0.9700
N1—C21.372 (4)C9—C101.452 (5)
N1—H10.864 (14)C10—H10A0.9700
N2—C101.467 (4)C10—H10B0.9700
N2—C111.464 (4)C11—H110.9800
N2—H20.912 (14)C11—C121.523 (4)
C1—H1A0.9300C11—C161.524 (4)
C1—C81.357 (5)C12—H12A0.9700
C2—C31.388 (4)C12—H12B0.9700
C2—C71.410 (4)C12—C131.514 (5)
C3—H30.9300C13—H13A0.9700
C3—C41.375 (5)C13—H13B0.9700
C4—H40.9300C13—C141.508 (6)
C4—C51.382 (5)C14—H14A0.9700
C5—H50.9300C14—H14B0.9700
C5—C61.364 (5)C14—C151.497 (6)
C6—H60.9300C15—H15A0.9700
C6—C71.408 (5)C15—H15B0.9700
C7—C81.428 (5)C15—C161.521 (5)
C8—C91.505 (4)C16—H16A0.9700
C9—H9A0.9700C16—H16B0.9700
C1—N1—H1124 (3)C9—C10—H10A109.5
C2—N1—C1107.2 (3)C9—C10—H10B109.5
C2—N1—H1129 (2)H10A—C10—H10B108.1
C10—N2—H2113 (3)N2—C11—H11107.8
C11—N2—C10116.6 (3)N2—C11—C12115.5 (3)
C11—N2—H2106 (2)N2—C11—C16108.5 (2)
N1—C1—H1A124.5C12—C11—H11107.8
C8—C1—N1111.1 (3)C12—C11—C16109.3 (2)
C8—C1—H1A124.5C16—C11—H11107.8
N1—C2—C3130.3 (3)C11—C12—H12A109.4
N1—C2—C7108.6 (3)C11—C12—H12B109.4
C3—C2—C7121.1 (3)H12A—C12—H12B108.0
C2—C3—H3120.9C13—C12—C11111.0 (3)
C4—C3—C2118.3 (3)C13—C12—H12A109.4
C4—C3—H3120.9C13—C12—H12B109.4
C3—C4—H4119.1C12—C13—H13A109.3
C3—C4—C5121.8 (4)C12—C13—H13B109.3
C5—C4—H4119.1H13A—C13—H13B108.0
C4—C5—H5119.8C14—C13—C12111.4 (3)
C6—C5—C4120.5 (4)C14—C13—H13A109.3
C6—C5—H5119.8C14—C13—H13B109.3
C5—C6—H6120.0C13—C14—H14A109.5
C5—C6—C7119.9 (3)C13—C14—H14B109.5
C7—C6—H6120.0H14A—C14—H14B108.1
C2—C7—C8106.7 (3)C15—C14—C13110.6 (3)
C6—C7—C2118.4 (3)C15—C14—H14A109.5
C6—C7—C8134.9 (3)C15—C14—H14B109.5
C1—C8—C7106.4 (3)C14—C15—H15A109.2
C1—C8—C9129.4 (4)C14—C15—H15B109.2
C7—C8—C9124.1 (4)C14—C15—C16112.0 (3)
C8—C9—H9A108.2H15A—C15—H15B107.9
C8—C9—H9B108.2C16—C15—H15A109.2
H9A—C9—H9B107.3C16—C15—H15B109.2
C10—C9—C8116.5 (3)C11—C16—H16A109.2
C10—C9—H9A108.2C11—C16—H16B109.2
C10—C9—H9B108.2C15—C16—C11112.0 (3)
N2—C10—H10A109.5C15—C16—H16A109.2
N2—C10—H10B109.5C15—C16—H16B109.2
C9—C10—N2110.6 (3)H16A—C16—H16B107.9
N1—C1—C8—C70.6 (4)C4—C5—C6—C70.2 (5)
N1—C1—C8—C9178.0 (3)C5—C6—C7—C21.1 (4)
N1—C2—C3—C4178.7 (3)C5—C6—C7—C8179.2 (3)
N1—C2—C7—C6179.9 (3)C6—C7—C8—C1179.4 (3)
N1—C2—C7—C80.2 (3)C6—C7—C8—C91.9 (5)
N2—C11—C12—C13179.1 (3)C7—C2—C3—C40.2 (4)
N2—C11—C16—C15178.4 (3)C7—C8—C9—C10134.5 (4)
C1—N1—C2—C3179.5 (3)C8—C9—C10—N2170.4 (4)
C1—N1—C2—C70.5 (3)C10—N2—C11—C1256.0 (4)
C1—C8—C9—C1047.2 (6)C10—N2—C11—C16179.0 (3)
C2—N1—C1—C80.7 (4)C11—N2—C10—C9156.9 (4)
C2—C3—C4—C51.2 (5)C11—C12—C13—C1458.1 (4)
C2—C7—C8—C10.2 (3)C12—C11—C16—C1554.9 (4)
C2—C7—C8—C9178.4 (3)C12—C13—C14—C1556.4 (4)
C3—C2—C7—C61.0 (4)C13—C14—C15—C1654.5 (4)
C3—C2—C7—C8179.3 (3)C14—C15—C16—C1154.9 (4)
C3—C4—C5—C61.0 (5)C16—C11—C12—C1356.5 (4)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N1—H1···N2i0.86 (1)2.22 (2)3.069 (4)167 (3)
Symmetry code: (i) x+1, y1/2, z+1.
N-[2-(1H-Indol-3-yl)ethyl]cyclohexanaminium bromide (II) top
Crystal data top
C16H23N2+·BrF(000) = 672
Mr = 323.27Dx = 1.320 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 10.5584 (6) ÅCell parameters from 9846 reflections
b = 7.9266 (5) Åθ = 2.8–26.3°
c = 19.4507 (13) ŵ = 2.52 mm1
β = 92.406 (2)°T = 297 K
V = 1626.44 (18) Å3Block, colourless
Z = 40.3 × 0.13 × 0.03 mm
Data collection top
Bruker D8 Venture CMOS
diffractometer
2978 reflections with I > 2σ(I)
φ and ω scansRint = 0.037
Absorption correction: multi-scan
(SADABS; Krause et al., 2015)
θmax = 26.4°, θmin = 3.2°
Tmin = 0.610, Tmax = 0.745h = 1313
46579 measured reflectionsk = 99
3320 independent reflectionsl = 2424
Refinement top
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.045H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.109 w = 1/[σ2(Fo2) + 4.8013P]
where P = (Fo2 + 2Fc2)/3
S = 1.22(Δ/σ)max = 0.001
3320 reflectionsΔρmax = 0.58 e Å3
184 parametersΔρmin = 0.70 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
Br10.81840 (4)0.64728 (5)0.83341 (2)0.04595 (14)
N10.1405 (3)0.7180 (5)0.8197 (2)0.0510 (9)
N20.6414 (3)0.7350 (4)0.69368 (18)0.0362 (7)
C10.2277 (4)0.7985 (6)0.7822 (2)0.0514 (11)
H1A0.2084680.8778810.7481240.062*
C20.2018 (4)0.6091 (5)0.8650 (2)0.0397 (9)
C30.1549 (5)0.5037 (6)0.9141 (2)0.0542 (12)
H30.0682950.4959650.9205280.065*
C40.2401 (6)0.4109 (7)0.9529 (3)0.0680 (15)
H40.2111620.3397250.9869100.082*
C50.3704 (6)0.4212 (7)0.9425 (3)0.0709 (15)
H50.4259590.3543680.9689790.085*
C60.4180 (5)0.5268 (6)0.8944 (2)0.0544 (11)
H60.5048050.5342070.8887920.065*
C70.3330 (4)0.6233 (5)0.85403 (19)0.0364 (8)
C80.3467 (4)0.7472 (5)0.8011 (2)0.0391 (9)
C90.4690 (4)0.8051 (6)0.7726 (2)0.0461 (10)
H9A0.5338830.8094650.8094000.055*
H9B0.4582860.9180330.7541130.055*
C100.5116 (4)0.6891 (6)0.7169 (2)0.0443 (10)
H10A0.4513750.6947000.6778960.053*
H10B0.5128200.5740230.7338480.053*
C110.6844 (4)0.6344 (5)0.6336 (2)0.0398 (9)
H110.6665380.5151020.6420990.048*
C120.6154 (4)0.6853 (6)0.5674 (2)0.0481 (11)
H12A0.6305620.8038420.5584420.058*
H12B0.5249850.6693920.5715930.058*
C130.6611 (5)0.5796 (7)0.5079 (3)0.0591 (13)
H13A0.6390960.4622490.5150030.071*
H13B0.6188630.6167910.4652730.071*
C140.8031 (5)0.5951 (7)0.5020 (2)0.0616 (14)
H14A0.8305640.5214210.4657550.074*
H14B0.8241460.7101240.4898620.074*
C150.8720 (5)0.5486 (8)0.5691 (3)0.0676 (15)
H15A0.9623630.5654370.5648580.081*
H15B0.8579310.4302260.5788630.081*
C160.8262 (4)0.6553 (7)0.6284 (2)0.0559 (12)
H16A0.8689980.6201550.6711090.067*
H16B0.8462490.7729860.6206160.067*
H2A0.692 (3)0.722 (6)0.7316 (13)0.045 (12)*
H10.0593 (14)0.738 (6)0.815 (2)0.058 (14)*
H2B0.636 (4)0.844 (2)0.681 (2)0.045 (12)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
Br10.0447 (2)0.0384 (2)0.0545 (3)0.00711 (19)0.00029 (17)0.0026 (2)
N10.0337 (18)0.062 (2)0.058 (2)0.0049 (18)0.0068 (17)0.014 (2)
N20.0331 (17)0.0334 (18)0.0425 (19)0.0013 (14)0.0062 (14)0.0008 (15)
C10.048 (2)0.057 (3)0.050 (3)0.008 (2)0.009 (2)0.015 (2)
C20.043 (2)0.037 (2)0.039 (2)0.0032 (17)0.0058 (17)0.0037 (17)
C30.058 (3)0.051 (3)0.055 (3)0.017 (2)0.012 (2)0.000 (2)
C40.091 (4)0.053 (3)0.061 (3)0.016 (3)0.007 (3)0.019 (3)
C50.081 (4)0.059 (3)0.071 (4)0.007 (3)0.013 (3)0.019 (3)
C60.053 (3)0.052 (3)0.058 (3)0.003 (2)0.003 (2)0.003 (2)
C70.039 (2)0.034 (2)0.037 (2)0.0008 (16)0.0027 (16)0.0057 (16)
C80.039 (2)0.041 (2)0.039 (2)0.0003 (17)0.0087 (16)0.0034 (17)
C90.046 (2)0.044 (2)0.050 (2)0.0042 (19)0.0143 (19)0.004 (2)
C100.037 (2)0.051 (3)0.047 (2)0.0087 (19)0.0136 (18)0.004 (2)
C110.045 (2)0.0282 (19)0.047 (2)0.0044 (17)0.0153 (17)0.0061 (17)
C120.044 (2)0.052 (3)0.049 (2)0.007 (2)0.0075 (19)0.006 (2)
C130.064 (3)0.059 (3)0.054 (3)0.004 (3)0.009 (2)0.011 (2)
C140.064 (3)0.073 (4)0.050 (3)0.011 (3)0.026 (2)0.001 (2)
C150.051 (3)0.084 (4)0.070 (3)0.021 (3)0.029 (2)0.005 (3)
C160.040 (2)0.068 (3)0.060 (3)0.011 (2)0.012 (2)0.010 (3)
Geometric parameters (Å, º) top
N1—C11.358 (6)C9—H9B0.9700
N1—C21.375 (5)C9—C101.504 (6)
N1—H10.873 (10)C10—H10A0.9700
N2—C101.506 (5)C10—H10B0.9700
N2—C111.501 (5)C11—H110.9800
N2—H2A0.898 (10)C11—C121.506 (6)
N2—H2B0.900 (10)C11—C161.515 (6)
C1—H1A0.9300C12—H12A0.9700
C1—C81.357 (6)C12—H12B0.9700
C2—C31.376 (6)C12—C131.525 (6)
C2—C71.415 (5)C13—H13A0.9700
C3—H30.9300C13—H13B0.9700
C3—C41.366 (7)C13—C141.513 (7)
C4—H40.9300C14—H14A0.9700
C4—C51.402 (8)C14—H14B0.9700
C5—H50.9300C14—C151.513 (7)
C5—C61.366 (7)C15—H15A0.9700
C6—H60.9300C15—H15B0.9700
C6—C71.396 (6)C15—C161.525 (7)
C7—C81.434 (6)C16—H16A0.9700
C8—C91.499 (5)C16—H16B0.9700
C9—H9A0.9700
C1—N1—C2109.2 (4)C9—C10—N2111.8 (3)
C1—N1—H1123 (3)C9—C10—H10A109.3
C2—N1—H1128 (3)C9—C10—H10B109.3
C10—N2—H2A104 (3)H10A—C10—H10B107.9
C10—N2—H2B105 (3)N2—C11—H11108.3
C11—N2—C10114.5 (3)N2—C11—C12111.9 (3)
C11—N2—H2A113 (3)N2—C11—C16109.0 (4)
C11—N2—H2B109 (3)C12—C11—H11108.3
H2A—N2—H2B111 (4)C12—C11—C16111.0 (3)
N1—C1—H1A124.6C16—C11—H11108.3
C8—C1—N1110.7 (4)C11—C12—H12A109.6
C8—C1—H1A124.6C11—C12—H12B109.6
N1—C2—C3130.7 (4)C11—C12—C13110.2 (4)
N1—C2—C7106.9 (3)H12A—C12—H12B108.1
C3—C2—C7122.4 (4)C13—C12—H12A109.6
C2—C3—H3121.2C13—C12—H12B109.6
C4—C3—C2117.6 (5)C12—C13—H13A109.4
C4—C3—H3121.2C12—C13—H13B109.4
C3—C4—H4119.5H13A—C13—H13B108.0
C3—C4—C5121.1 (5)C14—C13—C12111.0 (4)
C5—C4—H4119.5C14—C13—H13A109.4
C4—C5—H5119.1C14—C13—H13B109.4
C6—C5—C4121.8 (5)C13—C14—H14A109.4
C6—C5—H5119.1C13—C14—H14B109.4
C5—C6—H6120.8H14A—C14—H14B108.0
C5—C6—C7118.4 (5)C15—C14—C13111.0 (4)
C7—C6—H6120.8C15—C14—H14A109.4
C2—C7—C8106.9 (3)C15—C14—H14B109.4
C6—C7—C2118.8 (4)C14—C15—H15A109.4
C6—C7—C8134.2 (4)C14—C15—H15B109.4
C1—C8—C7106.3 (4)C14—C15—C16111.1 (4)
C1—C8—C9127.6 (4)H15A—C15—H15B108.0
C7—C8—C9126.1 (4)C16—C15—H15A109.4
C8—C9—H9A109.3C16—C15—H15B109.4
C8—C9—H9B109.3C11—C16—C15109.6 (4)
C8—C9—C10111.6 (3)C11—C16—H16A109.7
H9A—C9—H9B108.0C11—C16—H16B109.7
C10—C9—H9A109.3C15—C16—H16A109.7
C10—C9—H9B109.3C15—C16—H16B109.7
N2—C10—H10A109.3H16A—C16—H16B108.2
N2—C10—H10B109.3
N1—C1—C8—C70.8 (5)C4—C5—C6—C71.5 (8)
N1—C1—C8—C9179.9 (4)C5—C6—C7—C20.6 (7)
N1—C2—C3—C4178.8 (5)C5—C6—C7—C8178.3 (5)
N1—C2—C7—C6179.1 (4)C6—C7—C8—C1178.9 (5)
N1—C2—C7—C80.9 (4)C6—C7—C8—C91.8 (8)
N2—C11—C12—C13179.6 (4)C7—C2—C3—C40.0 (7)
N2—C11—C16—C15177.9 (4)C7—C8—C9—C1084.2 (5)
C1—N1—C2—C3178.5 (5)C8—C9—C10—N2173.5 (4)
C1—N1—C2—C70.4 (5)C10—N2—C11—C1273.0 (4)
C1—C8—C9—C1095.0 (6)C10—N2—C11—C16163.9 (4)
C2—N1—C1—C80.3 (6)C11—N2—C10—C9174.5 (3)
C2—C3—C4—C50.8 (8)C11—C12—C13—C1456.6 (5)
C2—C7—C8—C11.0 (5)C12—C11—C16—C1558.5 (5)
C2—C7—C8—C9179.6 (4)C12—C13—C14—C1555.5 (6)
C3—C2—C7—C60.1 (6)C13—C14—C15—C1656.0 (6)
C3—C2—C7—C8178.2 (4)C14—C15—C16—C1157.0 (6)
C3—C4—C5—C61.6 (9)C16—C11—C12—C1358.4 (5)
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2A···Br10.90 (1)2.41 (1)3.307 (4)172 (4)
N1—H1···Br1i0.87 (1)2.68 (3)3.468 (4)151 (4)
N2—H2B···Br1ii0.90 (1)2.47 (2)3.340 (3)163 (4)
Symmetry codes: (i) x1, y, z; (ii) x+3/2, y+1/2, z+3/2.
Bis{N-[2-(1H-indol-3-yl)ethyl]cyclohexanaminium} (2E)-but-2-enedioate (III) top
Crystal data top
C16H23N2+·C2HO2F(000) = 648
Mr = 300.39Dx = 1.186 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 9.2231 (10) ÅCell parameters from 7849 reflections
b = 16.1611 (16) Åθ = 2.6–26.3°
c = 11.4595 (12) ŵ = 0.08 mm1
β = 99.865 (4)°T = 297 K
V = 1682.8 (3) Å3Block, bronze
Z = 40.32 × 0.22 × 0.2 mm
Data collection top
Bruker D8 Venture CMOS
diffractometer
2803 reflections with I > 2σ(I)
φ and ω scansRint = 0.028
Absorption correction: multi-scan
(SADABS; Krause et al., 2015)
θmax = 26.4°, θmin = 2.6°
Tmin = 0.694, Tmax = 0.745h = 1111
20060 measured reflectionsk = 2020
3446 independent reflectionsl = 1414
Refinement top
Refinement on F23 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.043H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.121 w = 1/[σ2(Fo2) + (0.057P)2 + 0.4152P]
where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
3446 reflectionsΔρmax = 0.22 e Å3
211 parametersΔρmin = 0.17 e Å3
Special details top

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2) top
xyzUiso*/Ueq
O20.72753 (11)0.47420 (7)0.97368 (12)0.0632 (3)
O40.74997 (12)0.60453 (6)1.03308 (11)0.0600 (3)
N10.33759 (16)0.73002 (8)0.54717 (12)0.0530 (3)
N20.46996 (12)0.42877 (7)0.83748 (10)0.0402 (3)
C10.43744 (18)0.68408 (10)0.62215 (13)0.0522 (4)
H1A0.5138360.7061330.6768330.063*
C20.24236 (16)0.67738 (9)0.48012 (12)0.0444 (3)
C30.12270 (18)0.69461 (11)0.39157 (14)0.0589 (4)
H30.0953020.7487640.3710170.071*
C40.0471 (2)0.62879 (15)0.33603 (17)0.0753 (5)
H40.0323770.6385170.2758200.090*
C50.0863 (2)0.54759 (14)0.36747 (19)0.0780 (6)
H50.0325660.5042330.3279130.094*
C60.20302 (19)0.53036 (10)0.45603 (16)0.0609 (4)
H60.2274960.4759010.4770330.073*
C70.28409 (15)0.59569 (8)0.51382 (12)0.0426 (3)
C80.41022 (16)0.60185 (9)0.60614 (12)0.0452 (3)
C90.48890 (17)0.53145 (10)0.67518 (14)0.0523 (4)
H9A0.5842250.5500630.7159320.063*
H9B0.5047320.4872680.6214640.063*
C100.39908 (16)0.49921 (9)0.76478 (13)0.0475 (3)
H10A0.3829290.5440730.8172990.057*
H10B0.3036620.4814520.7230960.057*
C110.50069 (15)0.35126 (8)0.77365 (12)0.0423 (3)
H110.5659300.3647430.7172510.051*
C120.57867 (19)0.29119 (10)0.86470 (15)0.0577 (4)
H12A0.5198090.2827010.9261730.069*
H12B0.6724340.3144670.9012900.069*
C130.6045 (2)0.20810 (11)0.80791 (19)0.0785 (6)
H13A0.6714110.2157250.7520710.094*
H13B0.6498590.1699330.8686870.094*
C140.4613 (3)0.17171 (11)0.74422 (18)0.0784 (6)
H14A0.4809510.1202400.7062920.094*
H14B0.3974040.1596540.8010730.094*
C150.3856 (3)0.23094 (13)0.65269 (16)0.0783 (6)
H15A0.2919230.2076580.6158170.094*
H15B0.4453530.2384380.5916190.094*
C160.35933 (18)0.31489 (11)0.70660 (14)0.0584 (4)
H16A0.3173790.3526390.6440400.070*
H16B0.2891250.3085350.7600510.070*
C170.80163 (14)0.53717 (8)1.00368 (12)0.0397 (3)
C180.96469 (14)0.53303 (8)1.01170 (12)0.0401 (3)
H181.0191510.5804761.0348170.048*
H2A0.5558 (13)0.4470 (10)0.8805 (13)0.061 (5)*
H10.330 (2)0.7840 (6)0.5455 (17)0.075 (6)*
H2B0.4089 (16)0.4143 (10)0.8881 (12)0.057 (5)*
Atomic displacement parameters (Å2) top
U11U22U33U12U13U23
O20.0387 (6)0.0534 (6)0.0948 (9)0.0079 (5)0.0038 (5)0.0168 (6)
O40.0520 (6)0.0374 (5)0.0972 (9)0.0050 (4)0.0316 (6)0.0031 (5)
N10.0706 (9)0.0364 (6)0.0517 (7)0.0033 (6)0.0096 (6)0.0033 (5)
N20.0349 (6)0.0417 (6)0.0432 (6)0.0028 (5)0.0045 (5)0.0042 (5)
C10.0589 (9)0.0501 (8)0.0457 (8)0.0022 (7)0.0033 (7)0.0005 (7)
C20.0508 (8)0.0445 (7)0.0403 (7)0.0063 (6)0.0143 (6)0.0038 (6)
C30.0601 (10)0.0671 (10)0.0496 (8)0.0182 (8)0.0094 (7)0.0116 (8)
C40.0550 (10)0.1013 (15)0.0642 (11)0.0070 (10)0.0047 (8)0.0026 (11)
C50.0691 (12)0.0806 (14)0.0785 (13)0.0142 (10)0.0037 (10)0.0156 (11)
C60.0632 (10)0.0485 (9)0.0706 (10)0.0031 (7)0.0106 (8)0.0066 (8)
C70.0462 (7)0.0408 (7)0.0430 (7)0.0046 (6)0.0140 (6)0.0013 (6)
C80.0489 (8)0.0438 (7)0.0443 (7)0.0069 (6)0.0118 (6)0.0055 (6)
C90.0489 (8)0.0535 (9)0.0556 (8)0.0119 (7)0.0125 (7)0.0126 (7)
C100.0447 (8)0.0459 (8)0.0528 (8)0.0134 (6)0.0107 (6)0.0094 (6)
C110.0401 (7)0.0426 (7)0.0452 (7)0.0052 (6)0.0100 (6)0.0034 (6)
C120.0577 (9)0.0463 (8)0.0640 (9)0.0070 (7)0.0046 (7)0.0086 (7)
C130.0968 (15)0.0521 (10)0.0886 (13)0.0254 (10)0.0213 (12)0.0133 (10)
C140.1227 (18)0.0475 (10)0.0713 (12)0.0069 (10)0.0346 (12)0.0107 (9)
C150.1055 (16)0.0739 (13)0.0546 (10)0.0116 (11)0.0112 (10)0.0191 (9)
C160.0568 (9)0.0642 (10)0.0499 (8)0.0003 (8)0.0026 (7)0.0062 (7)
C170.0356 (6)0.0357 (7)0.0482 (7)0.0013 (5)0.0082 (5)0.0001 (5)
C180.0363 (7)0.0346 (6)0.0493 (7)0.0039 (5)0.0070 (5)0.0044 (5)
Geometric parameters (Å, º) top
O2—C171.2411 (16)C9—H9B0.9700
O4—C171.2572 (16)C9—C101.518 (2)
N1—C11.366 (2)C10—H10A0.9700
N1—C21.362 (2)C10—H10B0.9700
N1—H10.876 (9)C11—H110.9800
N2—C101.4935 (17)C11—C121.514 (2)
N2—C111.5018 (18)C11—C161.514 (2)
N2—H2A0.907 (9)C12—H12A0.9700
N2—H2B0.905 (9)C12—H12B0.9700
C1—H1A0.9300C12—C131.529 (2)
C1—C81.359 (2)C13—H13A0.9700
C2—C31.393 (2)C13—H13B0.9700
C2—C71.4105 (19)C13—C141.514 (3)
C3—H30.9300C14—H14A0.9700
C3—C41.368 (3)C14—H14B0.9700
C4—H40.9300C14—C151.501 (3)
C4—C51.392 (3)C15—H15A0.9700
C5—H50.9300C15—H15B0.9700
C5—C61.376 (3)C15—C161.527 (2)
C6—H60.9300C16—H16A0.9700
C6—C71.394 (2)C16—H16B0.9700
C7—C81.436 (2)C17—C181.4924 (18)
C8—C91.5000 (19)C18—C18i1.302 (3)
C9—H9A0.9700C18—H180.9300
C1—N1—H1126.9 (13)H10A—C10—H10B107.7
C2—N1—C1108.39 (12)N2—C11—H11108.9
C2—N1—H1124.6 (13)N2—C11—C12107.83 (12)
C10—N2—C11117.72 (11)N2—C11—C16110.67 (11)
C10—N2—H2A108.3 (11)C12—C11—H11108.9
C10—N2—H2B107.1 (11)C12—C11—C16111.52 (13)
C11—N2—H2A108.4 (11)C16—C11—H11108.9
C11—N2—H2B106.6 (11)C11—C12—H12A109.4
H2A—N2—H2B108.5 (15)C11—C12—H12B109.4
N1—C1—H1A124.5C11—C12—C13111.11 (14)
C8—C1—N1110.95 (14)H12A—C12—H12B108.0
C8—C1—H1A124.5C13—C12—H12A109.4
N1—C2—C3129.78 (14)C13—C12—H12B109.4
N1—C2—C7108.12 (12)C12—C13—H13A109.4
C3—C2—C7122.10 (15)C12—C13—H13B109.4
C2—C3—H3121.3H13A—C13—H13B108.0
C4—C3—C2117.42 (16)C14—C13—C12111.08 (16)
C4—C3—H3121.3C14—C13—H13A109.4
C3—C4—H4119.2C14—C13—H13B109.4
C3—C4—C5121.59 (16)C13—C14—H14A109.5
C5—C4—H4119.2C13—C14—H14B109.5
C4—C5—H5119.4H14A—C14—H14B108.1
C6—C5—C4121.16 (18)C15—C14—C13110.62 (16)
C6—C5—H5119.4C15—C14—H14A109.5
C5—C6—H6120.5C15—C14—H14B109.5
C5—C6—C7119.05 (16)C14—C15—H15A109.3
C7—C6—H6120.5C14—C15—H15B109.3
C2—C7—C8106.59 (12)C14—C15—C16111.77 (14)
C6—C7—C2118.68 (14)H15A—C15—H15B107.9
C6—C7—C8134.73 (14)C16—C15—H15A109.3
C1—C8—C7105.96 (12)C16—C15—H15B109.3
C1—C8—C9127.52 (14)C11—C16—C15111.59 (15)
C7—C8—C9126.43 (13)C11—C16—H16A109.3
C8—C9—H9A109.6C11—C16—H16B109.3
C8—C9—H9B109.6C15—C16—H16A109.3
C8—C9—C10110.27 (12)C15—C16—H16B109.3
H9A—C9—H9B108.1H16A—C16—H16B108.0
C10—C9—H9A109.6O2—C17—O4124.62 (13)
C10—C9—H9B109.6O2—C17—C18118.79 (12)
N2—C10—C9113.68 (11)O4—C17—C18116.52 (12)
N2—C10—H10A108.8C17—C18—H18118.0
N2—C10—H10B108.8C18i—C18—C17123.95 (16)
C9—C10—H10A108.8C18i—C18—H18118.0
C9—C10—H10B108.8
O2—C17—C18—C18i0.5 (3)C3—C4—C5—C60.0 (3)
O4—C17—C18—C18i177.60 (18)C4—C5—C6—C70.8 (3)
N1—C1—C8—C70.23 (17)C5—C6—C7—C20.7 (2)
N1—C1—C8—C9176.30 (14)C5—C6—C7—C8178.90 (17)
N1—C2—C3—C4178.46 (16)C6—C7—C8—C1179.25 (17)
N1—C2—C7—C6179.33 (14)C6—C7—C8—C94.2 (3)
N1—C2—C7—C80.35 (16)C7—C2—C3—C41.0 (2)
N2—C11—C12—C13176.04 (14)C7—C8—C9—C1074.77 (19)
N2—C11—C16—C15173.47 (13)C8—C9—C10—N2180.00 (12)
C1—N1—C2—C3179.77 (15)C10—N2—C11—C12177.27 (12)
C1—N1—C2—C70.21 (16)C10—N2—C11—C1660.50 (16)
C1—C8—C9—C10101.09 (19)C11—N2—C10—C960.41 (17)
C2—N1—C1—C80.02 (18)C11—C12—C13—C1456.1 (2)
C2—C3—C4—C50.9 (3)C12—C11—C16—C1553.43 (19)
C2—C7—C8—C10.35 (16)C12—C13—C14—C1556.9 (2)
C2—C7—C8—C9176.23 (13)C13—C14—C15—C1656.1 (2)
C3—C2—C7—C60.3 (2)C14—C15—C16—C1154.6 (2)
C3—C2—C7—C8179.95 (13)C16—C11—C12—C1354.34 (19)
Symmetry code: (i) x+2, y+1, z+2.
Hydrogen-bond geometry (Å, º) top
D—H···AD—HH···AD···AD—H···A
N2—H2A···O20.91 (1)1.81 (1)2.7107 (15)175 (2)
N1—H1···O4ii0.88 (1)1.94 (1)2.7899 (16)163 (2)
N2—H2B···O4iii0.91 (1)1.87 (1)2.7632 (16)167 (2)
Symmetry codes: (ii) x1/2, y+3/2, z1/2; (iii) x+1, y+1, z+2.
Selected metrical parameters (Å, °) for (I)—(III) top
Compoundindole r.m.s. deviation from planarityC7—C8—C9—C10C10—N2—C11
(I)0.00745.5 (4)116.6 (3)
(II)0.01084.2 (5)114.5 (3)
(III)0.008-74.77 (19)117.72 (11)
 

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