Supporting information
Crystallographic Information File (CIF) https://doi.org/10.1107/S2056989020006106/vm2232sup1.cif | |
Structure factor file (CIF format) https://doi.org/10.1107/S2056989020006106/vm2232Isup2.hkl | |
Chemical Markup Language (CML) file https://doi.org/10.1107/S2056989020006106/vm2232Isup3.cml |
CCDC reference: 2001173
Key indicators
- Single-crystal X-ray study
- T = 296 K
- Mean (C-C) = 0.004 Å
- R factor = 0.034
- wR factor = 0.084
- Data-to-parameter ratio = 16.0
checkCIF/PLATON results
No syntax errors found
Alert level C PLAT340_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00407 Ang. PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 21 Report PLAT913_ALERT_3_C Missing # of Very Strong Reflections in FCF .... 8 Note
Alert level G PLAT910_ALERT_3_G Missing # of FCF Reflection(s) Below Theta(Min). 1 Note PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 4 Note PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 2 Info
0 ALERT level A = Most likely a serious problem - resolve or explain 0 ALERT level B = A potentially serious problem, consider carefully 3 ALERT level C = Check. Ensure it is not caused by an omission or oversight 3 ALERT level G = General information/check it is not something unexpected 0 ALERT type 1 CIF construction/syntax error, inconsistent or missing data 1 ALERT type 2 Indicator that the structure model may be wrong or deficient 4 ALERT type 3 Indicator that the structure quality may be low 1 ALERT type 4 Improvement, methodology, query or suggestion 0 ALERT type 5 Informative message, check
checkCIF publication errors
Alert level A PUBL024_ALERT_1_A The number of authors is greater than 5. Please specify the role of each of the co-authors for your paper.
1 ALERT level A = Data missing that is essential or data in wrong format 0 ALERT level G = General alerts. Data that may be required is missing
Data collection: APEX3 (Bruker, 2007); cell refinement: SAINT (Bruker, 2007); data reduction: SAINT (Bruker, 2007); program(s) used to solve structure: SHELXT2016/6 (Sheldrick, 2015a); program(s) used to refine structure: SHELXL2016/6 (Sheldrick, 2015b); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012); software used to prepare material for publication: PLATON (Spek, 2020).
C16H14Cl2FN3 | Dx = 1.413 Mg m−3 |
Mr = 338.20 | Mo Kα radiation, λ = 0.71073 Å |
Orthorhombic, P212121 | Cell parameters from 6056 reflections |
a = 6.0730 (3) Å | θ = 2.8–26.4° |
b = 15.9782 (9) Å | µ = 0.42 mm−1 |
c = 16.3860 (7) Å | T = 296 K |
V = 1590.03 (14) Å3 | Block, orange |
Z = 4 | 0.27 × 0.24 × 0.17 mm |
F(000) = 696 |
Bruker APEXII PHOTON 100 detector diffractometer | 2696 reflections with I > 2σ(I) |
φ and ω scans | Rint = 0.036 |
Absorption correction: multi-scan (SADABS; Bruker, 2003) | θmax = 26.4°, θmin = 2.5° |
Tmin = 0.887, Tmax = 0.944 | h = −7→7 |
12082 measured reflections | k = −19→19 |
3215 independent reflections | l = −20→20 |
Refinement on F2 | Hydrogen site location: inferred from neighbouring sites |
Least-squares matrix: full | H-atom parameters constrained |
R[F2 > 2σ(F2)] = 0.034 | w = 1/[σ2(Fo2) + (0.0431P)2 + 0.1514P] where P = (Fo2 + 2Fc2)/3 |
wR(F2) = 0.084 | (Δ/σ)max < 0.001 |
S = 1.05 | Δρmax = 0.13 e Å−3 |
3215 reflections | Δρmin = −0.22 e Å−3 |
201 parameters | Absolute structure: Flack x determined using 1002 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013). |
0 restraints | Absolute structure parameter: −0.02 (2) |
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
x | y | z | Uiso*/Ueq | ||
C1 | 0.4252 (4) | 0.61833 (16) | 0.56623 (16) | 0.0443 (6) | |
C2 | 0.5620 (5) | 0.68715 (18) | 0.55987 (18) | 0.0509 (7) | |
H2A | 0.540332 | 0.725536 | 0.517976 | 0.061* | |
C3 | 0.7298 (5) | 0.6994 (2) | 0.61488 (17) | 0.0573 (8) | |
H3A | 0.823241 | 0.745307 | 0.610610 | 0.069* | |
C4 | 0.7553 (5) | 0.6416 (2) | 0.67653 (18) | 0.0594 (8) | |
C5 | 0.6205 (6) | 0.5739 (2) | 0.6855 (2) | 0.0673 (9) | |
H5A | 0.641740 | 0.536178 | 0.728082 | 0.081* | |
C6 | 0.4535 (5) | 0.56267 (19) | 0.63053 (18) | 0.0574 (8) | |
H6A | 0.358152 | 0.517491 | 0.636245 | 0.069* | |
C7 | −0.0179 (4) | 0.53364 (16) | 0.45205 (16) | 0.0439 (6) | |
C8 | −0.0207 (4) | 0.58320 (16) | 0.37493 (15) | 0.0421 (6) | |
C9 | −0.1979 (4) | 0.63333 (18) | 0.35356 (16) | 0.0465 (6) | |
H9A | −0.319781 | 0.635689 | 0.387856 | 0.056* | |
C10 | −0.1976 (4) | 0.67976 (18) | 0.28261 (16) | 0.0470 (7) | |
H10A | −0.319254 | 0.712725 | 0.270104 | 0.056* | |
C11 | −0.0185 (4) | 0.67833 (17) | 0.22914 (15) | 0.0419 (6) | |
C12 | 0.1597 (5) | 0.62650 (17) | 0.25034 (16) | 0.0463 (6) | |
H12A | 0.280540 | 0.622891 | 0.215669 | 0.056* | |
C13 | 0.1577 (5) | 0.58098 (17) | 0.32175 (17) | 0.0473 (6) | |
H13A | 0.278742 | 0.547916 | 0.334730 | 0.057* | |
C14 | −0.1613 (5) | 0.47174 (16) | 0.46824 (16) | 0.0469 (6) | |
C15 | −0.1744 (6) | 0.7909 (2) | 0.14541 (19) | 0.0624 (8) | |
H15A | −0.174793 | 0.828007 | 0.191458 | 0.094* | |
H15B | −0.318008 | 0.766689 | 0.138916 | 0.094* | |
H15C | −0.136230 | 0.821563 | 0.097069 | 0.094* | |
C16 | 0.1532 (6) | 0.7139 (2) | 0.09817 (19) | 0.0666 (8) | |
H16A | 0.162051 | 0.655738 | 0.083877 | 0.100* | |
H16B | 0.292048 | 0.732038 | 0.119880 | 0.100* | |
H16C | 0.118356 | 0.746158 | 0.050458 | 0.100* | |
Cl1 | −0.16032 (15) | 0.41361 (5) | 0.55620 (5) | 0.0677 (3) | |
Cl2 | −0.36345 (14) | 0.44180 (5) | 0.40139 (5) | 0.0680 (3) | |
F1 | 0.9220 (4) | 0.65309 (16) | 0.73030 (13) | 0.0957 (8) | |
N1 | 0.2619 (4) | 0.60931 (14) | 0.50431 (14) | 0.0477 (5) | |
N2 | 0.1433 (4) | 0.54576 (14) | 0.51363 (13) | 0.0469 (5) | |
N3 | −0.0159 (4) | 0.72557 (16) | 0.15854 (14) | 0.0554 (6) |
U11 | U22 | U33 | U12 | U13 | U23 | |
C1 | 0.0531 (15) | 0.0378 (14) | 0.0420 (13) | 0.0006 (11) | −0.0011 (12) | −0.0018 (11) |
C2 | 0.0671 (18) | 0.0421 (15) | 0.0436 (14) | −0.0075 (13) | 0.0032 (14) | 0.0000 (12) |
C3 | 0.0676 (19) | 0.0562 (17) | 0.0480 (16) | −0.0201 (15) | 0.0029 (15) | −0.0036 (14) |
C4 | 0.0617 (18) | 0.070 (2) | 0.0468 (15) | −0.0164 (16) | −0.0090 (15) | 0.0004 (15) |
C5 | 0.079 (2) | 0.065 (2) | 0.0583 (18) | −0.0209 (17) | −0.0234 (17) | 0.0185 (15) |
C6 | 0.0655 (18) | 0.0480 (17) | 0.0588 (17) | −0.0192 (15) | −0.0148 (15) | 0.0152 (14) |
C7 | 0.0430 (13) | 0.0427 (14) | 0.0461 (14) | 0.0082 (11) | −0.0043 (12) | −0.0006 (11) |
C8 | 0.0433 (13) | 0.0398 (14) | 0.0433 (13) | 0.0034 (11) | −0.0052 (12) | −0.0006 (11) |
C9 | 0.0409 (14) | 0.0550 (16) | 0.0436 (14) | 0.0078 (12) | 0.0017 (12) | −0.0020 (12) |
C10 | 0.0421 (14) | 0.0513 (15) | 0.0474 (15) | 0.0121 (12) | −0.0034 (13) | 0.0028 (12) |
C11 | 0.0416 (14) | 0.0435 (15) | 0.0406 (14) | 0.0010 (11) | −0.0047 (12) | −0.0043 (11) |
C12 | 0.0384 (13) | 0.0517 (15) | 0.0486 (14) | 0.0059 (12) | 0.0035 (13) | −0.0033 (12) |
C13 | 0.0392 (13) | 0.0478 (14) | 0.0547 (15) | 0.0077 (12) | −0.0061 (13) | −0.0012 (12) |
C14 | 0.0453 (14) | 0.0438 (14) | 0.0515 (14) | 0.0037 (12) | −0.0048 (13) | −0.0001 (11) |
C15 | 0.0624 (19) | 0.0655 (19) | 0.0591 (18) | 0.0090 (16) | −0.0018 (17) | 0.0153 (15) |
C16 | 0.0647 (19) | 0.075 (2) | 0.0595 (18) | 0.0020 (18) | 0.0144 (18) | 0.0095 (16) |
Cl1 | 0.0720 (5) | 0.0627 (5) | 0.0683 (5) | −0.0060 (4) | 0.0004 (5) | 0.0197 (4) |
Cl2 | 0.0576 (4) | 0.0620 (5) | 0.0845 (5) | −0.0089 (4) | −0.0209 (4) | 0.0044 (4) |
F1 | 0.0914 (16) | 0.1181 (18) | 0.0777 (13) | −0.0488 (14) | −0.0399 (12) | 0.0172 (13) |
N1 | 0.0566 (14) | 0.0415 (12) | 0.0450 (12) | −0.0009 (11) | −0.0058 (11) | 0.0018 (10) |
N2 | 0.0506 (12) | 0.0449 (12) | 0.0454 (11) | −0.0031 (11) | −0.0081 (11) | 0.0016 (10) |
N3 | 0.0568 (15) | 0.0634 (16) | 0.0461 (12) | 0.0129 (12) | 0.0076 (12) | 0.0089 (11) |
C1—C2 | 1.382 (4) | C10—C11 | 1.397 (4) |
C1—C6 | 1.389 (4) | C10—H10A | 0.9300 |
C1—N1 | 1.426 (3) | C11—N3 | 1.381 (3) |
C2—C3 | 1.374 (4) | C11—C12 | 1.406 (4) |
C2—H2A | 0.9300 | C12—C13 | 1.378 (4) |
C3—C4 | 1.377 (4) | C12—H12A | 0.9300 |
C3—H3A | 0.9300 | C13—H13A | 0.9300 |
C4—F1 | 1.354 (3) | C14—Cl2 | 1.713 (3) |
C4—C5 | 1.365 (4) | C14—Cl1 | 1.715 (3) |
C5—C6 | 1.369 (4) | C15—N3 | 1.436 (4) |
C5—H5A | 0.9300 | C15—H15A | 0.9600 |
C6—H6A | 0.9300 | C15—H15B | 0.9600 |
C7—C14 | 1.344 (4) | C15—H15C | 0.9600 |
C7—N2 | 1.419 (3) | C16—N3 | 1.438 (4) |
C7—C8 | 1.491 (4) | C16—H16A | 0.9600 |
C8—C9 | 1.387 (4) | C16—H16B | 0.9600 |
C8—C13 | 1.391 (4) | C16—H16C | 0.9600 |
C9—C10 | 1.379 (4) | N1—N2 | 1.255 (3) |
C9—H9A | 0.9300 | ||
C2—C1—C6 | 119.5 (3) | N3—C11—C10 | 121.7 (2) |
C2—C1—N1 | 116.4 (2) | N3—C11—C12 | 121.3 (2) |
C6—C1—N1 | 124.1 (2) | C10—C11—C12 | 117.0 (2) |
C3—C2—C1 | 120.6 (3) | C13—C12—C11 | 120.9 (3) |
C3—C2—H2A | 119.7 | C13—C12—H12A | 119.5 |
C1—C2—H2A | 119.7 | C11—C12—H12A | 119.5 |
C2—C3—C4 | 118.0 (3) | C12—C13—C8 | 121.7 (2) |
C2—C3—H3A | 121.0 | C12—C13—H13A | 119.1 |
C4—C3—H3A | 121.0 | C8—C13—H13A | 119.1 |
F1—C4—C5 | 119.0 (3) | C7—C14—Cl2 | 122.9 (2) |
F1—C4—C3 | 118.1 (3) | C7—C14—Cl1 | 124.2 (2) |
C5—C4—C3 | 122.9 (3) | Cl2—C14—Cl1 | 112.87 (16) |
C4—C5—C6 | 118.5 (3) | N3—C15—H15A | 109.5 |
C4—C5—H5A | 120.8 | N3—C15—H15B | 109.5 |
C6—C5—H5A | 120.8 | H15A—C15—H15B | 109.5 |
C5—C6—C1 | 120.5 (3) | N3—C15—H15C | 109.5 |
C5—C6—H6A | 119.8 | H15A—C15—H15C | 109.5 |
C1—C6—H6A | 119.8 | H15B—C15—H15C | 109.5 |
C14—C7—N2 | 114.0 (2) | N3—C16—H16A | 109.5 |
C14—C7—C8 | 123.4 (2) | N3—C16—H16B | 109.5 |
N2—C7—C8 | 122.5 (2) | H16A—C16—H16B | 109.5 |
C9—C8—C13 | 117.5 (2) | N3—C16—H16C | 109.5 |
C9—C8—C7 | 122.0 (2) | H16A—C16—H16C | 109.5 |
C13—C8—C7 | 120.6 (2) | H16B—C16—H16C | 109.5 |
C10—C9—C8 | 121.5 (3) | N2—N1—C1 | 113.2 (2) |
C10—C9—H9A | 119.2 | N1—N2—C7 | 114.8 (2) |
C8—C9—H9A | 119.2 | C11—N3—C15 | 121.0 (2) |
C9—C10—C11 | 121.4 (2) | C11—N3—C16 | 120.9 (2) |
C9—C10—H10A | 119.3 | C15—N3—C16 | 118.0 (2) |
C11—C10—H10A | 119.3 | ||
C6—C1—C2—C3 | 2.2 (4) | N3—C11—C12—C13 | 178.6 (3) |
N1—C1—C2—C3 | −177.5 (2) | C10—C11—C12—C13 | −1.4 (4) |
C1—C2—C3—C4 | −0.6 (4) | C11—C12—C13—C8 | 1.1 (4) |
C2—C3—C4—F1 | 179.3 (3) | C9—C8—C13—C12 | −0.1 (4) |
C2—C3—C4—C5 | −0.7 (5) | C7—C8—C13—C12 | −179.7 (3) |
F1—C4—C5—C6 | −179.6 (3) | N2—C7—C14—Cl2 | −177.0 (2) |
C3—C4—C5—C6 | 0.4 (6) | C8—C7—C14—Cl2 | 0.6 (4) |
C4—C5—C6—C1 | 1.2 (5) | N2—C7—C14—Cl1 | 2.1 (3) |
C2—C1—C6—C5 | −2.5 (5) | C8—C7—C14—Cl1 | 179.6 (2) |
N1—C1—C6—C5 | 177.1 (3) | C2—C1—N1—N2 | −179.9 (2) |
C14—C7—C8—C9 | 63.2 (4) | C6—C1—N1—N2 | 0.4 (4) |
N2—C7—C8—C9 | −119.4 (3) | C1—N1—N2—C7 | −178.6 (2) |
C14—C7—C8—C13 | −117.3 (3) | C14—C7—N2—N1 | −172.0 (2) |
N2—C7—C8—C13 | 60.1 (3) | C8—C7—N2—N1 | 10.4 (3) |
C13—C8—C9—C10 | −0.4 (4) | C10—C11—N3—C15 | 13.1 (4) |
C7—C8—C9—C10 | 179.1 (3) | C12—C11—N3—C15 | −166.9 (3) |
C8—C9—C10—C11 | 0.0 (4) | C10—C11—N3—C16 | −170.4 (3) |
C9—C10—C11—N3 | −179.1 (3) | C12—C11—N3—C16 | 9.6 (4) |
C9—C10—C11—C12 | 0.9 (4) |
Cg1 is the centroid of the C1–C6 ring. |
D—H···A | D—H | H···A | D···A | D—H···A |
C14—Cl1···Cg1i | 1.72 (1) | 3.93 (1) | 3.882 (3) | 76 (1) |
Symmetry code: (i) x−1, y, z. |
A···B | Distance | Symmetry operation for B |
H15B···H16B | 2.45 | -1 + x, y, z |
Cl1···N3 | 3.409 (3) | -1/2 - x, 1 - y, 1/2 + z |
C12···H6A | 2.97 | 1/2 - x, 1 - y, -1/2 + z |
Cl2···H13A | 2.96 | -1 + x, y, z |
F1···H10A | 2.66 | 3/2 + x, 3/2 - y, 1 - z |
H3A···H2A | 2.53 | 1/2 + x, 3/2 - y, 1 - z |
Contact | Percentage contribution |
H···H | 33.3 |
Cl···H/H···Cl | 22.9 |
C···H/H···C | 15.5 |
F···H/H···F | 9.0 |
N···H/H···N | 4.9 |
C···C | 4.7 |
Cl···C/C···Cl | 2.7 |
N···C/C···N | 2.0 |
Cl···N/N···Cl | 2.0 |
Cl···F/F···Cl | 1.9 |
C···F/F···C | 0.8 |
F···N/N···F | 0.3 |